mRNA_6910 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163711
Unique NamemRNA_6910
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: A0A835YYG2_9STRA (TPT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYG2_9STRA)

HSP 1 Score: 626 bits (1614), Expect = 5.060e-226
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 1
Query:    1 MALLQGPAIPDSAASDAGAAKHAVQRQCGTAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQCLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNSGMSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRETTAA 993
            MALLQGPAIPDSAASDAGAAKHAVQRQCGTAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQCLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNSGMSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRETTAA
Sbjct:    1 MALLQGPAIPDSAASDAGAAKHAVQRQCGTAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQCLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNSGMSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRETTAA 331          
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: W7U393_9STRA (Udp-sugar transporter ust74c n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U393_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.510e-60
Identity = 121/301 (40.20%), Postives = 194/301 (64.45%), Query Frame = 1
Query:   85 GTAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQCLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNSG--MSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRE 981
            G+A+ +  +S++++ VNK VL++Y+FPS   LA  QF  T  +   L     +QV  +S + +  +  L  + +VNV++GLG TQ +S+PM+TALR+ + + TM+LE  +  ++PS AV + V MM+ GALVAA+SDLS D VGY +I+++++ +AL GV++K+ L+S   ++K ++L+YN+ FG V M      G+++    +E+     F         F+++F +A  MG VLNYS++LCT  NSALTT +VG +KN+L  Y+GM    DY+F   N +GIHI+I G+  Y+YV+ + 
Sbjct:   14 GSALMYGMASLSIMVVNKIVLTSYQFPSFAFLAASQFLFTTMIIFILDRVGRLQVTAMSWEVVRVMAPLVVISLVNVLAGLGGTQKVSLPMFTALRRFSILMTMLLEAYVFGTSPSTAVKMSVFMMIIGALVAAMSDLSFDTVGYAMILLSDLFTALNGVVMKKTLSSSSTVNKMAVLYYNSLFGVVMM------GLLMTLRDEELARVREFRHWQDP--HFVLYFFLAGAMGSVLNYSIFLCTLYNSALTTTVVGCLKNILTTYIGMFLISDYIFSWENFLGIHISIAGSLVYSYVELQS 306          
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: A0A0L0G3T3_9EUKA (TPT domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G3T3_9EUKA)

HSP 1 Score: 201 bits (510), Expect = 1.570e-58
Identity = 123/309 (39.81%), Postives = 183/309 (59.22%), Query Frame = 1
Query:   76 RQCGTA-MFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQCLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNSG-MSKASLLFYNAAFG-GVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRETTAA 993
            RQ G A MF+A +S +++ +NK VL++Y FPS   LA CQF AT+       T+ +I        + W V  L  +F++N ++GLG TQ ISIPM+T LR+ + + TM+LE  L  +  S  V  CV +M+ GALVAA+ DLS D  GYT IM+NN+ +A  GV++K+ L S  +    L++YN  F   + +   + QG        E    V F    +    F+ +F  A+ MG VLN+S++ CT  NSALTT ++G +KN+L+ Y+GM    DYVF + N  G++++I G+  Y+YVK++E   A
Sbjct:   22 RQQGLAGMFYATTSFSIMFMNKIVLTSYHFPSFLFLALCQFVATIFCLEAGKTTNLITYPDFDMKHFWKVFPLPFIFMLNTLTGLGGTQKISIPMFTVLRRFSIVFTMILEGWLLGNVSSRNVKFCVFLMVFGALVAAVDDLSFDMAGYTFIMINNLATAANGVVIKKKLESKELGTFGLMYYNTLFSFPLLLFIFVYQG--------EWGSVVEFADWGN--FYFLFYFVGASVMGFVLNFSIFHCTKVNSALTTTVIGCLKNVLSTYIGMVALPDYVFTIANFAGVNVSIFGSLLYSYVKFKEQQTA 320          
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: B8CBG9_THAPS (TPT domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBG9_THAPS)

HSP 1 Score: 196 bits (498), Expect = 1.200e-56
Identity = 117/303 (38.61%), Postives = 193/303 (63.70%), Query Frame = 1
Query:   76 RQCGTAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQCLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNS-GMSKASLLFYNAAFG--GVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKY 975
            ++ GTA+F+A SS+ ++ VNK VLSTY+FPSV+TLA  QF++T        +   + +  +S   I  +L L++ +++N+++GL +TQ++S+PM   LR+ + + TM+LE+ +  S PS  + L VG+ML GALVAAL DLS + +GY +I  N++ +AL GV++KR       SK ++LF N+     GVS+   L+ G        E++    F   +++G  F+++  +A+ MG VLN +++LCT+TNSALTT +VG +KN+L +Y+GM    DY+F   + +GI+++I G+  Y    +
Sbjct:   50 KKVGTALFYAVSSLGVIFVNKIVLSTYKFPSVQTLALLQFSSTSLALKIASSFGYVHLLPISWKGIKSILPLSTCYLLNILTGLSATQNLSLPMMVLLRRASILMTMLLEKWMLNSQPSKTIQLSVGLMLSGALVAALGDLSFNMIGYIVIFFNDLFTALNGVIMKRTAEEYRKSKMTVLFLNSLLSAIGVSIFILLVPG--------ELQRVQKFDMWSNNG--FVVYLVLASLMGSVLNLAIFLCTSTNSALTTTVVGCLKNVLTSYLGMFIGGDYIFSWLSFLGINLSIAGSLIYAKATF 342          
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: UPI0001CBBDED (UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBBDED)

HSP 1 Score: 193 bits (490), Expect = 2.640e-55
Identity = 123/308 (39.94%), Postives = 188/308 (61.04%), Query Frame = 1
Query:   88 TAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQ---RLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQ-CLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNSG-MSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATC-MGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRETTAA 993
            +A+F+  SS  +V VNK VL+TY+FP+ + L   Q  AT+ V A     +++      R   D IWP   L  +++ N++ GLGST+ +++PM+T LR+ + + TMV E   LG++A S  V + V  M+ GAL+AA  DL+ D +GYT I+VNNIC+A  GV +K+ L++  + K  LL+YNA F        LL   +LA    E++ A++F    +    F IF  + +C MG +L Y+  LCT  NSALTT MVG +KN++  YVGM F  DY+F L N +G++I++ G+  Y+Y+ + + +AA
Sbjct:   49 SALFYGLSSFLIVIVNKSVLTTYKFPAFQVLGIGQMLATIVVLAAAKEFKIVSFPDCTREIPDKIWP---LPLIYMGNLVFGLGSTKRLNLPMFTVLRRFSILMTMVAEYYVLGVNA-SRKVQIVVFSMIFGALIAASDDLAFDMMGYTYILVNNICTAANGVYMKKKLDAKELGKYGLLYYNALF-------MLLPASVLAVTTGEMDKALSFNDWTNK---FFIFQFLLSCIMGFILMYATLLCTNYNSALTTTMVGCIKNIVITYVGMIFGGDYIFSLTNFLGLNISVAGSLFYSYLTFYDNSAA 342          
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: SQV7_CAEEL (UDP-sugar transporter sqv-7 n=12 Tax=Caenorhabditis TaxID=6237 RepID=SQV7_CAEEL)

HSP 1 Score: 192 bits (487), Expect = 3.480e-55
Identity = 114/299 (38.13%), Postives = 174/299 (58.19%), Query Frame = 1
Query:   88 TAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQCLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNS-GMSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRE 981
            +A+F+   SV +V VNK +L+ Y+FPS   +   Q  AT+ +       R++Q   L +     ++ L  ++  N+ISGLG TQ I++PM+T LR+ + + TM+LE  +     S AV + VG+M+GG+ +AA+ DLS D +GYT+I +NNIC+A  GV  K+ L++  + K  L+FYN  F        LL  + +     +++ A +F+   S        F ++   G VLNYS+ LCT  NSALTT  VG +KN+   YVGM  S DYVF+  N  GI++++ G+  YTYV +R 
Sbjct:   15 SAVFYGVISVLIVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFPSLDSSIPRKIMPLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEFYILNVKASKAVKISVGLMIGGSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLDAKDLGKYGLMFYNCLF-------MLLPALCVVQYTGDLDRAYSFMLSDSMTSSVWTCFLLSCICGFVLNYSLVLCTHHNSALTTTCVGPIKNLFVTYVGMFSSGDYVFQWANFTGINVSVFGSILYTYVTFRS 306          
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: A0A183FRV1_HELPZ (TPT domain-containing protein n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183FRV1_HELPZ)

HSP 1 Score: 191 bits (486), Expect = 4.520e-55
Identity = 124/307 (40.39%), Postives = 187/307 (60.91%), Query Frame = 1
Query:   88 TAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQ-CLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNSG-MSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIR---MASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRETTAA 993
            +A+F+  +S+ +V VNK +L+ + FPS   + F Q  ATV V      +R++            ++ L  +FV+N++SGLG T+ I++PM+T LR+ + + TM+LE   LG++A S AV + V +M+ G+++AAL DL+ D  GYTLI +N+IC+A  GV  K+ L +  + K  L+FYN+ F        LL   +L     + E AVAF+R   M +S   +M FF    C G VLNYS+ LCT  NSALTT  VG +KN+   YVGM  S DYVF+L N +GI+++++G+  YTYV +R  + +
Sbjct:   13 SAVFYGITSILVVFVNKILLTNFRFPSFLFVGFGQMIATVLVLFLARATRLVSFPSFDYSIPRKIMPLPVLFVLNLVSGLGGTKLINLPMFTVLRRFSILMTMILEYYILGVNA-SKAVRISVCLMIAGSVIAALFDLTFDLWGYTLIGLNDICTAALGVYTKQKLEAKELGKYGLMFYNSLF-------MLLPTFLLICYTGDTERAVAFMRSVDMTTSA--WMCFFISCFC-GFVLNYSLVLCTHFNSALTTTCVGPIKNLFVTYVGMFSSGDYVFQLTNFVGINVSVMGSILYTYVTFRTKSVS 308          
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: A0A1I7SWW6_BURXY ((pine wood nematode) hypothetical protein n=2 Tax=Bursaphelenchus TaxID=6324 RepID=A0A1I7SWW6_BURXY)

HSP 1 Score: 191 bits (485), Expect = 7.920e-55
Identity = 118/314 (37.58%), Postives = 186/314 (59.24%), Query Frame = 1
Query:   64 HAVQRQCGTAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWP--VLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQCL-GMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNS-GMSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRETTAA 993
            H++  + G+A+FF  +SV +V VNK +L+  +FPS   +   Q AATV V        ++   R   DN  P  +  L  ++ VN++SGLGSTQ +++PM+T LR+ +   TMV E  L G++ P  A  + V +M+ G+ +AA+ DLS D  GY LI++N+I +A  GV +K+ L+S  + K  LL+YN+ F        ++   +LA   ++ E   A++   +     ++ F +++  G VLNYS+ LCT  NSALTT  VG +KN++  Y GM  S DYVF+  N +G++I++LG+  YTYV +R  + A
Sbjct:   12 HSLFSRVGSAVFFGLTSVLIVFVNKILLTNLKFPSFLYVGLGQMAATVLVLFTAQKCNIVDFPR--CDNSIPRRIFPLPLIYFVNLVSGLGSTQKLNLPMFTVLRRFSIFLTMVFEYLLLGVNVPF-ATKVSVFLMIFGSFIAAIYDLSFDAYGYFLILINDIFTAANGVYMKKKLDSKDLGKWGLLYYNSLF-------MIVPATLLAFYTEDTEKVRAYVEAGNMTTSVVLCFLLSSICGFVLNYSLVLCTHYNSALTTTCVGPIKNLVVTYAGMVSSGDYVFQWANFVGVNISVLGSVLYTYVTFRTKSVA 315          
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: A0A158PAF9_ANGCA (TPT domain-containing protein n=2 Tax=Angiostrongylus TaxID=6312 RepID=A0A158PAF9_ANGCA)

HSP 1 Score: 190 bits (483), Expect = 1.230e-54
Identity = 115/303 (37.95%), Postives = 179/303 (59.08%), Query Frame = 1
Query:   91 AMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQ-CLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNSG-MSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRETTAA 993
            A+F+  +S+ +V VNK +L+   FPS   + F Q  ATV V     + R++            ++ L  +FV+N++SGLG TQ I++PM+T LR+ + + TMVLE   LG+SA   AV L VG+M+ G+++AA  DL+ D  GYTLI++N+IC+A  GV  K+ L +  + +  L+FYN+ F        L+  ++L +   +   A+ F+          I F ++   G +LNYS+ LCT  NSALTT  VG +KN+   YVGM  S DY+F+  N IGI+++++G+  YTYV +R  + +
Sbjct:   13 AVFYGINSIIVVFVNKILLTNLRFPSFLFVGFGQMVATVVVLFMARSLRIVSFPSFDYSISRKIMPLPVLFVLNLVSGLGGTQLINLPMFTVLRRFSILMTMVLEYYILGISATR-AVRLAVGLMIAGSIIAAFFDLAFDLWGYTLILLNDICTAALGVYTKQKLEAKELGRYGLMFYNSLF-------MLIPTLLLISYTGDTNRAIIFMLSVEMTPTIWICFFISCICGFILNYSLVLCTHFNSALTTTCVGPIKNLFVTYVGMFSSGDYIFQWTNFIGINVSVMGSVLYTYVTFRRKSVS 307          
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Match: K7H3M6_CAEJA (TPT domain-containing protein n=2 Tax=Caenorhabditis japonica TaxID=281687 RepID=K7H3M6_CAEJA)

HSP 1 Score: 190 bits (482), Expect = 1.930e-54
Identity = 113/304 (37.17%), Postives = 178/304 (58.55%), Query Frame = 1
Query:   76 RQCGTAMFFAFSSVTLVCVNKEVLSTYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASVFVVNVISGLGSTQHISIPMYTALRQLATIATMVLE-QCLGMSAPSCAVHLCVGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNS-GMSKASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMIFFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDYVFRLHNIIGIHITILGASCYTYVKYRE 981
            ++  +A+F+   SV +V VNK +L+ + FPS   +   Q AAT+ +       R++    L +     ++ L  ++  N+ISGLG TQ I++PM+T LR+ + + TMVLE   LG+ A S AV + VG+M+GG+ +AA+ DLS D  GYT+I +NN+C+A  GV  K+ L++  + K  L+FYN  F        +L  + +     +++ A  F+   +      + F ++   G +LNYS+ LCT  NSALTT  VG +KN+   YVGM  S DYVF+  N +GI++++ G+  YTYV +R 
Sbjct:   11 QRVASAVFYGTISVLIVFVNKILLTNFRFPSFLFVGVGQMAATIGILFLAKLFRIVTFPSLDSSIPRKIMPLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMVLEFYILGVKA-SKAVKISVGLMIGGSFIAAIYDLSFDAFGYTMIFINNVCTAALGVYTKQKLDAKDLGKYGLMFYNCLF-------MILPALCVTQYTGDLDRAYTFMISDAMTSSVWMCFGLSCVCGFILNYSLVLCTHHNSALTTTCVGPIKNLFVTYVGMFSSGDYVFQWANFVGINVSVFGSIVYTYVTFRS 306          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163711 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYG2_9STRA5.060e-226100.00TPT domain-containing protein n=1 Tax=Tribonema mi... [more]
W7U393_9STRA3.510e-6040.20Udp-sugar transporter ust74c n=1 Tax=Nannochlorops... [more]
A0A0L0G3T3_9EUKA1.570e-5839.81TPT domain-containing protein n=1 Tax=Sphaeroforma... [more]
B8CBG9_THAPS1.200e-5638.61TPT domain-containing protein n=1 Tax=Thalassiosir... [more]
UPI0001CBBDED2.640e-5539.94UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose tr... [more]
SQV7_CAEEL3.480e-5538.13UDP-sugar transporter sqv-7 n=12 Tax=Caenorhabditi... [more]
A0A183FRV1_HELPZ4.520e-5540.39TPT domain-containing protein n=1 Tax=Heligmosomoi... [more]
A0A1I7SWW6_BURXY7.920e-5537.58(pine wood nematode) hypothetical protein n=2 Tax=... [more]
A0A158PAF9_ANGCA1.230e-5437.95TPT domain-containing protein n=2 Tax=Angiostrongy... [more]
K7H3M6_CAEJA1.930e-5437.17TPT domain-containing protein n=2 Tax=Caenorhabdit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:324097..328271 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163711|e_gw1.27.188.1
KEGG TC2.A.7.15
BRITEko00000,ko02000
KEGG koko:K15281
GOsGO:0000003,GO:0000139,GO:0000271,GO:0001501,GO:0001654,GO:0001745,GO:0002009,GO:0002119,GO:0002164,GO:0002165,GO:0003002,GO:0003006,GO:0003674,GO:0005215,GO:0005338,GO:0005459,GO:0005460,GO:0005461,GO:0005462,GO:0005463,GO:0005464,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0005797,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006065,GO:0006082,GO:0006139,GO:0006725,GO:0006790,GO:0006793,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0007275,GO:0007350,GO:0007365,GO:0007367,GO:0007389,GO:0007423,GO:0007444,GO:0007447,GO:0007472,GO:0007476,GO:0007548,GO:0007552,GO:0007560,GO:0007610,GO:0008150,GO:0008152,GO:0008406,GO:0008509,GO:0008514,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0012505,GO:0015012,GO:0015014,GO:0015075,GO:0015165,GO:0015291,GO:0015297,GO:0015711,GO:0015780,GO:0015786,GO:0015787,GO:0015789,GO:0015790,GO:0015849,GO:0015931,GO:0015932,GO:0016020,GO:0016051,GO:0016053,GO:0018130,GO:0018146,GO:0018991,GO:0019098,GO:0019438,GO:0019538,GO:0019752,GO:0022414,GO:0022804,GO:0022857,GO:0030166,GO:0030201,GO:0030203,GO:0030204,GO:0030206,GO:0030334,GO:0031090,GO:0031984,GO:0031985,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0033692,GO:0034220,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035262,GO:0035282,GO:0035295,GO:0040012,GO:0040025,GO:0042175,GO:0042339,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045137,GO:0046394,GO:0046398,GO:0046483,GO:0046942,GO:0048513,GO:0048563,GO:0048569,GO:0048592,GO:0048608,GO:0048609,GO:0048706,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0050650,GO:0050654,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051270,GO:0055085,GO:0055086,GO:0060429,GO:0060562,GO:0061458,GO:0065007,GO:0071702,GO:0071704,GO:0071705,GO:0072334,GO:0090481,GO:0090596,GO:0098588,GO:0098656,GO:0098791,GO:0098827,GO:1901135,GO:1901137,GO:1901264,GO:1901360,GO:1901362,GO:1901505,GO:1901564,GO:1901566,GO:1901576,GO:1903354,GO:1903510,GO:1903825,GO:1905039,GO:1990569,GO:2000145
Preferred nameSLC35D2
DescriptionGDP-mannose transmembrane transporter activity
COG categoryGOU
Max annot lvl33154|Opisthokonta
EggNOG OGsCOG5070@1|root,KOG1444@2759|Eukaryota,38FCE@33154|Opisthokonta
Evalue2.57e-59
Seed ortholog72019.SARC_04064T0
Hectar predicted targeting categoryother localisation
TranscriptId164033
TrackFilteredModels1
ProteinId163711
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163711gene_6910Tribonema minus UTEX_B_3156 geneContig_27 324097..328271 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6910_1exon_6910_1Tribonema minus UTEX_B_3156 exonContig_27 324097..324342 +
exon_6910_2exon_6910_2Tribonema minus UTEX_B_3156 exonContig_27 327012..327425 +
exon_6910_3exon_6910_3Tribonema minus UTEX_B_3156 exonContig_27 327936..328271 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6910CDS_6910Tribonema minus UTEX_B_3156 CDSContig_27 324097..324342 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163711Trimin1|163711|e_gw1.27.188.1Tribonema minus UTEX_B_3156 polypeptideContig_27 324097..328271 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6910 ID=mRNA_6910|Name=jgi.p|Trimin1|163711|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=996bp|location=Sequence derived from alignment at Contig_27:324097..328271+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCTTGCTCCAGGGACCTGCCATTCCAGACTCTGCCGCGTCTGATGC
CGGAGCAGCAAAGCACGCCGTGCAAAGGCAATGTGGGACCGCGATGTTTT
TTGCCTTCAGCTCGGTCACCCTGGTCTGCGTGAACAAGGAAGTGCTGTCC
ACGTACGAGTTTCCAAGTGTGCGGACGTTGGCTTTCTGCCAGTTCGCTGC
GACGGTCGCTGTCACGGCATGCCTTCACACTTCGAGGGTTATACAGGTGC
AGAGACTTTCTGCAGACAACATTTGGCCAGTACTCGCGCTAGCCTCAGTG
TTTGTGGTCAATGTGATCTCTGGCCTGGGCAGTACACAGCACATCAGCAT
CCCAATGTACACTGCTCTGCGGCAACTCGCAACAATTGCAACCATGGTGC
TGGAGCAATGCCTGGGGATGTCTGCACCATCGTGTGCGGTGCATTTGTGC
GTGGGGATGATGCTTGGAGGCGCGCTTGTTGCAGCGCTCTCGGACCTCAG
CATGGATGGTGTTGGGTACACTCTCATCATGGTCAACAACATCTGTTCAG
CCTTGTATGGGGTGCTGGTTAAACGTGTGCTCAACAGCGGAATGTCAAAG
GCATCACTACTGTTCTACAATGCGGCATTTGGCGGGGTTTCAATGGTAAG
TCAGCTTCTGCAGGGCATGATGCTGGCAAACGAGCGTCAGGAAGTTGAAG
ATGCGGTAGCGTTCATTCGAATGGCATCATCTGGACTGGACTTTATGATT
TTCTTTGCAATGGCAACCTGCATGGGGATGGTGCTCAATTACAGTGTGTA
CCTCTGCACTGCTACCAATAGTGCTTTGACAACAGCTATGGTCGGCAGTG
TCAAAAATATGCTAGCTGCCTATGTTGGCATGGCATTCAGCGATGACTAC
GTATTTCGCCTACACAACATCATCGGCATCCACATTACCATCCTTGGCGC
AAGCTGTTACACGTATGTCAAGTACAGAGAAACTACGGCGGCATAA
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protein sequence of jgi.p|Trimin1|163711

>Trimin1|163711|e_gw1.27.188.1 ID=Trimin1|163711|e_gw1.27.188.1|Name=jgi.p|Trimin1|163711|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=332bp
MALLQGPAIPDSAASDAGAAKHAVQRQCGTAMFFAFSSVTLVCVNKEVLS
TYEFPSVRTLAFCQFAATVAVTACLHTSRVIQVQRLSADNIWPVLALASV
FVVNVISGLGSTQHISIPMYTALRQLATIATMVLEQCLGMSAPSCAVHLC
VGMMLGGALVAALSDLSMDGVGYTLIMVNNICSALYGVLVKRVLNSGMSK
ASLLFYNAAFGGVSMVSQLLQGMMLANERQEVEDAVAFIRMASSGLDFMI
FFAMATCMGMVLNYSVYLCTATNSALTTAMVGSVKNMLAAYVGMAFSDDY
VFRLHNIIGIHITILGASCYTYVKYRETTAA*
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mRNA from alignment at Contig_27:324097..328271+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6910 ID=mRNA_6910|Name=jgi.p|Trimin1|163711|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4175bp|location=Sequence derived from alignment at Contig_27:324097..328271+ (Tribonema minus UTEX_B_3156 )
ATGGCCTTGCTCCAGGGACCTGCCATTCCAGACTCTGCCGCGTCTGATGC CGGAGCAGCAAAGCACGCCGTGCAAAGGCAATGTGGGACCGCGATGTTTT TTGCCTTCAGCTCGGTCACCCTGGTCTGCGTGAACAAGGAAGTGCTGTCC ACGTACGAGTTTCCAAGTGTGCGGACGTTGGCTTTCTGCCAGTTCGCTGC GACGGTCGCTGTCACGGCATGCCTTCACACTTCGAGGGTTATACAGGTGT GTATTGCTCTCACTTCCGCTTCGTTTTGGAGGGCCTAGAATGGTACCAAA ATTCAGCTTCGACACTGCACGTCACCCTACAGGTTGCGGACGCTGGTCTC AGGCGTCGTCGAGCAATGTTTTTAAGGCTGCAGCTCAGGACGGGCTACTG CAGATAGCTTCTGATAGGGATTAGTGCAGCGATCTGTCCTGTAAGACCCC CCGTTGATTGGCACATTAGTCACAGCACCACCTGTATAGGCTATGACTGC AGTTGCAGTTATGGTAACGGAGGCTGTCTTGGTAGCCCCAACACTGTCTG TGATGACGCAGGAGTAGCTGCCTGCTCTGAGGGAGATCTCGTTGACAGTG GGGTTGGTGATTGTGTACGTTCCTGTCCAGAAGTAGGTGTAGCCGGTACC GCTGGTACCAGTGCAGTGATTTCACCAAGTGAGCCGCCATTGCCAATGAT CAGTATTTTCTCTGCGTGCAGTTGAGAAGTGTGCAAATGCAGCTATGCAG CTGCTGCACATGTAACACAGTTGCTGCTTTGATGCCCTCCTTCTTATTAT ACTGTATTATTTGCTGAAGCTCACGTGCAACAAATTGCTCTGAAGACTCT TGTTGCATGCTTGAAGCAAGATGGACCCCTTTCGATACAACACCTAGGTA AAGTATATCATACCTGTGTGCTGTGTCAAGCAAGCAAAGCTTTGTTGATG GCATGTGTGCTGCATGGTCAGCGACGATGCAGTTTGGAAGAGCCAAATAG CATGTTAAGTGTTAAGAGCATCTCTACCACCGCCACAGTTGTCTTGTACC GCGTAGCTATGGCTTCCATCAGGGACCTTTCAGCGCCTGGAGCCCCAGCG GTTTTCGCTAAAGCGGCATGTGCTTTGTAATGCATTGATTAGCAGATCAA TGACATCAGTAGCAGCAGCAGTGGCATGGACGCAATGCGCACCACGTGTA CATTCCAAAGGAGAGCACGTGTGATGTTGCCTGCAAGCATTGCGGCATCA ATAGCAGCAGCAGCGGCCTGATTATCTGATTGAGGTGTCCAGAACGGCAG AAGACGGCGTCCGTGAGTCGCAGAGGCTGCCCACATCTGGATCCAATGCC ATAGTGGTTTGCCGACCGTTCATGACAGTTTGACTTACACACGTATGGCC CGGTGCTTGCGTCTTCAGCACCACCACACCTTCAGTGGCACATGTGGGCA GCCGCAGCAGTTGCTGCGAGAAGTTGCCACAGCAGTCGCTCAGAGACTCG CCTCGTGGGTACATTACTGCTAGCAGTTGTGACGCTACAGCAGCTAGTTG CTGGAAATGTGCGGTTGCCAACGTTGCTCCTCAGTCAGGGACCGCCGCTG TGAGCCTTGTTTGTTACGTTTCATCGGTTACAGCTCCTGCTTAGCTCCCA ATTCAGCAAAAGCCTCGGTGAGAAGCTGCCGTCAGAGATAATTCATGCAC AGTTCAAAGAGAGAGTGACCCACTCTCAAAGTCATATCACAGTGTGCTGC CTAATTGCGTCTAATGCGGCAGAGCACATTCAAGTTGCAGCGCCACAGTG CTGTTGTTGCCGAAGTACAAGTAGTTGTCAAGTACATGTAGTATCTTGCA CGTGCCACAGTGTAAATAACTGATAGATACCACTGCGCTGATACGCTAAT GGTCCATTTGATGCATGCCTCCTCATGCACAGTGCAGCACGCATGTTGCA GAGCATGTGCGAGGAGGTAATGGCCAGGCAAGCAAATTAAAATCTGAATC AGTCTGGCTATGACAGCAGCATCGCACATTGGCAAAATACTGTGCTGTGC TCCCTGGTGTCATGTGATGTGTCTGGTCGCCAGTGCCCAGCCAGTCACGC CTTCATGTGCTTAAGTCAAACTTGATGTCCAGGAGGCAGCTGCCACGGCG TTACACCGGACAGACATCAAGTTTCATGGCTTACAGTATACTTCGAAGTA TGATGGTGCAGTAGTTGCAAGTGCAGCAGGTTTTCAGTTCTAATTCCTGC TCTAGTCTGACGCGTCTATTGCAAAATTCATTCCACACCACACTATCAGA CGCAAATCAGCTCACTTTAAGAGCTCTGTCCGTTCATGCGCACTGCTCAC ACTATTTCTGTGATGTTTGGCGTATCATTATCAGAATCTGCAAGTTCATA GCACGCTGACAAGCCGTTTTGTGTTTGTCTGTGCAACCTGTGTTCAGAGT TGCTTTGACACTGCCTGTGTTGGAATGGCACTCACATGGTCGTTTTCGAG GCCCTGGCATACGCTGGGCGTCGATGTCGCGCTTCAACTATGTGTTGGCC AAAAGCATGTCCGGCTAGGCTACTTACTGCAGCAGCAGCAGGATCTGTTC TTATTGGTACTATTGAATACATGGTTCTCCTATGCTCTGTAGTCCGAACG AGTCTGCGGAGAGCACTGTGCAATAGTAGTTGGGAGGGCTTAGAGACCTG ACAATGTGCACCTCTGAGGTGCGCATGCATTCTGGCAGTTCCGGGTGGTA TCTTAACATTCGGTGCTGGCAAGAAGCACAATTTGTCTAGCACGTGCTCA ACAAGCATCAATGGGTGTAGACTTTCGGCCCACTTCTGGTAGTTATGCAG CAGTCGCAAAGGTGCTGCAGACCTACTCATATTGCGGTTCATGCCTGTTT TCTTTGCATCTGCAGGTGCAGAGACTTTCTGCAGACAACATTTGGCCAGT ACTCGCGCTAGCCTCAGTGTTTGTGGTCAATGTGATCTCTGGCCTGGGCA GTACACAGCACATCAGCATCCCAATGTACACTGCTCTGCGGCAACTCGCA ACAATTGCAACCATGGTGCTGGAGCAATGCCTGGGGATGTCTGCACCATC GTGTGCGGTGCATTTGTGCGTGGGGATGATGCTTGGAGGCGCGCTTGTTG CAGCGCTCTCGGACCTCAGCATGGATGGTGTTGGGTACACTCTCATCATG GTCAACAACATCTGTTCAGCCTTGTATGGGGTGCTGGTTAAACGTGTGCT CAACAGCGGAATGTCAAAGGCATCACTACTGTTCTACAATGCGGCATTTG GCGGGGTTTCAATGGTAAGTCAGCTTCTGGTTTTCATCTTCTTGCCTTTA AGTTACTGGTAGTGCTGCAGCAACTGCATAATATCACGTACCAACTAGCC TGTGAGTCTGGTCAGACATGTGAGCTACAGCATCAGGTGTGTTCTTGTTA TTGCAGTGGACTGCACAGCATGCATTGACTCACAAGCAGGTATGTTGTCT TGACACACTTTGATTTGGGCGTGTCGCAAAATTGCAGCAGAAGCAGCAAG AGAGACCTTTACGCGAACAAACCAAAGCCCTTCTTTCGAATATCGCAGCG CAGAGCATCATTTGGGCGTGTCGCAACGTTGCAGCAGAAAGTAGCAAGAG TAATTCTCACTGAACAAACAAATGCTGATCTTGTCAAATAGTGAAGCGTC GATTACAGTATTTCTTGTCAAGCATCTGGCTCTGATCCTGGCTTTAGCAT GTGTGCGCATTGTGCAAGCTCTGTTGCATTGATGTAGCTTGCAATTTTGA CACTCCTTGTGTGCTGCTGATTGCATTCGTCACTTTGAGCAGGGCATGAT GCTGGCAAACGAGCGTCAGGAAGTTGAAGATGCGGTAGCGTTCATTCGAA TGGCATCATCTGGACTGGACTTTATGATTTTCTTTGCAATGGCAACCTGC ATGGGGATGGTGCTCAATTACAGTGTGTACCTCTGCACTGCTACCAATAG TGCTTTGACAACAGCTATGGTCGGCAGTGTCAAAAATATGCTAGCTGCCT ATGTTGGCATGGCATTCAGCGATGACTACGTATTTCGCCTACACAACATC ATCGGCATCCACATTACCATCCTTGGCGCAAGCTGTTACACGTATGTCAA GTACAGAGAAACTACGGCGGCATAA
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Coding sequence (CDS) from alignment at Contig_27:324097..328271+

>mRNA_6910 ID=mRNA_6910|Name=jgi.p|Trimin1|163711|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=996bp|location=Sequence derived from alignment at Contig_27:324097..328271+ (Tribonema minus UTEX_B_3156 )
ATGGCCTTGCTCCAGGGACCTGCCATTCCAGACTCTGCCGCGTCTGATGC
CGGAGCAGCAAAGCACGCCGTGCAAAGGCAATGTGGGACCGCGATGTTTT
TTGCCTTCAGCTCGGTCACCCTGGTCTGCGTGAACAAGGAAGTGCTGTCC
ACGTACGAGTTTCCAAGTGTGCGGACGTTGGCTTTCTGCCAGTTCGCTGC
GACGGTCGCTGTCACGGCATGCCTTCACACTTCGAGGGTTATACAGGTGC
AGAGACTTTCTGCAGACAACATTTGGCCAGTACTCGCGCTAGCCTCAGTG
TTTGTGGTCAATGTGATCTCTGGCCTGGGCAGTACACAGCACATCAGCAT
CCCAATGTACACTGCTCTGCGGCAACTCGCAACAATTGCAACCATGGTGC
TGGAGCAATGCCTGGGGATGTCTGCACCATCGTGTGCGGTGCATTTGTGC
GTGGGGATGATGCTTGGAGGCGCGCTTGTTGCAGCGCTCTCGGACCTCAG
CATGGATGGTGTTGGGTACACTCTCATCATGGTCAACAACATCTGTTCAG
CCTTGTATGGGGTGCTGGTTAAACGTGTGCTCAACAGCGGAATGTCAAAG
GCATCACTACTGTTCTACAATGCGGCATTTGGCGGGGTTTCAATGGTAAG
TCAGCTTCTGCAGGGCATGATGCTGGCAAACGAGCGTCAGGAAGTTGAAG
ATGCGGTAGCGTTCATTCGAATGGCATCATCTGGACTGGACTTTATGATT
TTCTTTGCAATGGCAACCTGCATGGGGATGGTGCTCAATTACAGTGTGTA
CCTCTGCACTGCTACCAATAGTGCTTTGACAACAGCTATGGTCGGCAGTG
TCAAAAATATGCTAGCTGCCTATGTTGGCATGGCATTCAGCGATGACTAC
GTATTTCGCCTACACAACATCATCGGCATCCACATTACCATCCTTGGCGC
AAGCTGTTACACGTATGTCAAGTACAGAGAAACTACGGCGGCATAA
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