mRNA_674 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A835Z7E9_9STRA (FirrV-1-P2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E9_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.190e-92 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1
Query: 1 MTELNKLTYESCKQFLALEEGDKVKIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSKKQW 399
MTELNKLTYESCKQFLALEEGDKVKIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSKKQW
Sbjct: 1 MTELNKLTYESCKQFLALEEGDKVKIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSKKQW 133
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A835YYA9_9STRA (Putative nuclease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA9_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.920e-35 Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 1
Query: 4 TELNKLTYESCKQFLALEEGDKVKIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSAC--DEMMALHDVCYAYDGGSKKQW 399
T + +TY++C ++L +GD K+V+V DGDTV A NG + CRL GID ELHS + HEKAL KA+ L+A NK+VT+ + LEKYGR+L DL V+G + M+ + DVC+AYDGG K W
Sbjct: 16 TTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKSPW 149
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A6C0HBW5_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HBW5_9ZZZZ) HSP 1 Score: 105 bits (262), Expect = 2.770e-26 Identity = 63/135 (46.67%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 1 MTELNKLTYESCKQFLALEEGDKVKIVKVYDGDTVT-AAFIRN--GIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSKKQ 396
M L+K+TYE+ F+ KV VKVYDGDT T AA + N G +F RL GIDTPE+ EK LA +ARDALSA+ +NK+V +K+ S EKYGR+L D+ VD +E M + YDGG+K++
Sbjct: 22 MEYLDKVTYENTTPFIPPITAGKV--VKVYDGDTFTLAAKLPNTSGPVYRFTVRLNGIDTPEIKGKTATEKELAKRARDALSAIIMNKIVVLKNVSTEKYGRLLADVYVDETFCVNEYMITNKFAVKYDGGTKER 154
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A6C0AUH4_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AUH4_9ZZZZ) HSP 1 Score: 103 bits (258), Expect = 6.610e-26 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 73 KIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSKKQW 399
K+V VYDGDTV F NG+ K+ CRL G+DTPE+ +S EKA RD L LNKVV VK L+KYGR+L + +DG + ++ + ++ +AYDGG+K+ W
Sbjct: 26 KVVSVYDGDTVKTIFPLNGVLYKWNCRLTGVDTPEIRTSNKKEKAFGYVVRDLLREKILNKVVQVKCDDLDKYGRLLTVIYIDGVNV-NQWLIDNEYAFAYDGGTKRSW 133
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A2E9UET5_9BACT (TNase-like domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A2E9UET5_9BACT) HSP 1 Score: 97.1 bits (240), Expect = 5.420e-23 Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 73 KIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSKKQW 399
K+V VYDGDTV G +F CR+EG+DTPEL + EKA+ +K RD L L+K+V VK +KYGR+L D+ +D S + + + ++YDGG+KK W
Sbjct: 42 KVVNVYDGDTVKIVMKMFGKFYRFNCRIEGVDTPELRTRNKKEKAMGIKVRDELRKKILDKMVQVKCGEFDKYGRLLVDIIIDNTSIT-KWLIENKFAFSYDGGTKKSW 149
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A2E0E2I3_9RHOB (TNase-like domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A2E0E2I3_9RHOB) HSP 1 Score: 95.5 bits (236), Expect = 1.710e-22 Identity = 47/111 (42.34%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 67 KVKIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSKKQW 399
K K+V VYDGDT+ F NG K+ CRL GIDTPEL + + HEK LA+ A++ L L LNK+V + +KYGR+L + + + H +YDGG K W
Sbjct: 36 KCKVVSVYDGDTMRVVFPLNGKMYKWNCRLLGIDTPELRTKDKHEKELAIIAKENLIKLVLNKIVYIHCGGWDKYGRLLVTPITKKEGNICDWLVKHKYAKSYDGGKKSSW 146
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A6C0IQQ1_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IQQ1_9ZZZZ) HSP 1 Score: 95.5 bits (236), Expect = 2.590e-22 Identity = 51/124 (41.13%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 37 KQFLALEEGDKVKIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDG---KSACDEMMALHDVCYAYDGGSKKQW 399
K+F E K+V VYDGDTV F KF CR+ G+DTPE+ + + EK + RD L LNKVVT+K +KYGR+L D++ G + E + D +AYDGG+KK W
Sbjct: 30 KEFSFEGETKIAKVVSVYDGDTVKVVFPVLRKLFKFNCRISGVDTPEIRTRDKVEKEHGLFVRDQLRKKILNKVVTIKCGDFDKYGRLLIDIKERGALTEETVSEWLINKDYAFAYDGGTKKSW 153
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A6C0B9E1_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0B9E1_9ZZZZ) HSP 1 Score: 95.1 bits (235), Expect = 2.620e-22 Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 10 LNKLTYESCKQF-LALEEGDKVKIVKVYDGDTVTAAFIRNGIP---VKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSK 390
L + Y+ ++F L ++ G K+VKVYDGDT+T A GI +F R+ GID+PEL +EK LA ++RDALS + + K+V +K+ S EKYGRIL D+ + + CD M+ ++ YDGG+K
Sbjct: 17 LANIEYKDTEKFVLPIQSG---KVVKVYDGDTITIASKFPGINGRIYRFSVRMNGIDSPELKGGTENEKELAKRSRDALSNIIMGKIVDLKNVSTEKYGRILADVYLGDLNICDWML-INKYAVKYDGGTK 143
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A6C0DRT6_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DRT6_9ZZZZ) HSP 1 Score: 94.4 bits (233), Expect = 5.380e-22 Identity = 56/130 (43.08%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 16 KLTYESCKQFLALEEGDKVKIVKVYDGDTVTAAF-IRNGIPV--KFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSKKQ 396
K+ Y +F+A K K++KVYDGDT+T A I +P +F RL GIDTPE+ HEK LA+KARDAL+ L +K V +K+ EKYGR+L D+ + G ++ M + YDGG+KK+
Sbjct: 21 KIEYNDTIEFVA--PITKGKVIKVYDGDTITVASRITPDLPTLYRFHIRLNGIDTPEIKGGSFHEKELAIKARDALADLIFDKTVYLKNNKTEKYGRVLSDVYL-GDLHVNQWMLDNKYAVKYDGGTKKR 147
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Match: A0A6C0CMD0_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CMD0_9ZZZZ) HSP 1 Score: 90.5 bits (223), Expect = 1.550e-20 Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 1
Query: 58 EGDKVK--IVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSACDEMMALHDVCYAYDGGSKKQW 399
+G+K+K +V VYDGDT+ F N I K+ CRL GIDTPEL + HEK LA A++ L L LN V+ ++ +KYGR+L + + M + +YDGG+K W
Sbjct: 32 KGEKIKCKVVSVYDGDTMKVVFPLNNIMYKWNCRLLGIDTPELRTKNTHEKELAKIAKENLIKLVLNNVIYIQCGGWDKYGRLLVTPFTSKEGNICDWMIKNKYAKSYDGGTKASW 147 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156921 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_674 ID=mRNA_674|Name=jgi.p|Trimin1|156921|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=402bp|location=Sequence derived from alignment at Contig_2:1112751..1113152- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACCGAACTAAATAAATTGACGTACGAGTCGTGTAAGCAGTTCTTGGCback to top protein sequence of jgi.p|Trimin1|156921 >Trimin1|156921|e_gw1.2.281.1 ID=Trimin1|156921|e_gw1.2.281.1|Name=jgi.p|Trimin1|156921|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=134bp MTELNKLTYESCKQFLALEEGDKVKIVKVYDGDTVTAAFIRNGIPVKFQCback to top mRNA from alignment at Contig_2:1112751..1113152- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_674 ID=mRNA_674|Name=jgi.p|Trimin1|156921|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=402bp|location=Sequence derived from alignment at Contig_2:1112751..1113152- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:1112751..1113152- >mRNA_674 ID=mRNA_674|Name=jgi.p|Trimin1|156921|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=402bp|location=Sequence derived from alignment at Contig_2:1112751..1113152- (Tribonema minus UTEX_B_3156 )back to top |