mRNA_670 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|156944
Unique NamemRNA_670
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835Z3V1_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V1_9STRA)

HSP 1 Score: 870 bits (2248), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 1
Query:    1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGGKL 1302
            TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGGKL
Sbjct:    1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGGKL 434          
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835Z566_9STRA (FirrV-1-B50 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z566_9STRA)

HSP 1 Score: 763 bits (1969), Expect = 1.340e-276
Identity = 366/432 (84.72%), Postives = 408/432 (94.44%), Query Frame = 1
Query:    1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
            TI+KSVHTRFTS ALDD+FQELSTSGFASTSTAT+SRYGDL+SRITLEIVLP L APDIPDTSAGA AGALYA+TGA+YVNCIG+A WEDCI+EIGGST+DQLFSDFCFIYEE+AGRAG+RLEEA+GRV FS  VD+DLIEKS+REQTLYVPLPLWFSKY PAT+GLALPIVALSFHEIKLKLKTRSIAECVSV+YKD+AGDWRLSDLAPIN  TGTALVNSD+K+RLLVS+VYLDVTERNAMSSVAHS LINVTQRQVM+VAAGS++K E KLF NHPC+ L+WY+RPLDWNTEGGRRRFSCGYKDR+DFSHQ++GSVD TKGLPWGD++DAITTASLSLNGHQRWP D  + YFRV+TP+TSWRTMP+T IY+YSFALQAHDWQPT+HLNFSR +H+SLGLTFA+GIKASEL+A VESYNLL+IANGLGG
Sbjct:    1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGG 432          
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835ZCT3_9STRA (FirrV-1-B50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT3_9STRA)

HSP 1 Score: 703 bits (1814), Expect = 2.740e-252
Identity = 346/424 (81.60%), Postives = 382/424 (90.09%), Query Frame = 1
Query:   10 KSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISL--GLTFASGIKASELVAFVESYNLLV 1275
            ++VHTRFTS ALDD+FQELSTSGFASTSTAT+SRYGDL+SRITLEIVLP L APDIPDTS+GA AGA YA+T AYYVN I +A WED ILEIGGST+DQLFSDFCFIYEE+AGRAG+RLEEA+GRV FS  VD+DL EKS+REQTLYVPLPLWFSKY PAT+GLALPIVALSFHEIKLKLKTRSIAECVSVVYKD+AGDWRLSDLAPIN  TGTALVNSD+K+RLLVS+VYLDVTERNAMSSVAHS LINVTQRQVM+VAAGS++K E KLF NHPC+ L+WY+RP DWN EGGRRRFSCGYKDRFDFSHQE+G+VD TKGL WGD+VD ITTAS SLNGHQRWP D  A YFRV+TP+TSWRTMP+T IY+YSFALQA DWQPT+HLN SRL    L  GLTFA+GIKASEL+A VESYNLL+
Sbjct:   40 RAVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSSGAGAGAHYADTAAYYVNSIDFAAWEDVILEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLAEKSAREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDSAGDWRLSDLAPINATTGTALVNSDMKLRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPQDWNLEGGRRRFSCGYKDRFDFSHQEQGTVDATKGLAWGDTVDPITTASRSLNGHQRWPQDQNAVYFRVLTPYTSWRTMPTTNIYTYSFALQAQDWQPTAHLNMSRLKKTGLKNGLTFAAGIKASELIAMVESYNLLI 463          
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835Z4S3_9STRA (Large eukaryotic DNA virus major capsid protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S3_9STRA)

HSP 1 Score: 574 bits (1480), Expect = 8.600e-200
Identity = 280/433 (64.67%), Postives = 350/433 (80.83%), Query Frame = 1
Query:    1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSD-LAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
            TI++SVHTRFTS A+DD+FQ+LS SGF ++S+AT++RYGDLISR+TLEI LP L AP +P T          A+T A++VNCIG+A WED  +EIGGS +DQL+SDF  IYEE+AGR G+RLEEA+GRV FS+AVD+DLIEK+ ++Q LYVPLPLWFSKY PAT+GLALPIVAL+FH++++K+KTRSI+EC  V+YKD A  W+L++   P+N  TGTALVN+DLK+RL+V+ VYLD TER AMSSV HS LI+  QRQV S+AA    K E+KLF NHP + LIW++RPLDWNTE GRRRFSCG++DR+DF+   E S D +  LP+GD+VD I TASL+LNGH RWP DM + YFR+  P+ +WRTMP+T IY+YSFAL+AH WQPTSHLNFSRLDH+SLG TF   IK+SE  +FVE+YNLLVI +GLGG
Sbjct:  161 TIWRSVHTRFTSCAMDDEFQDLSNSGFDTSSSATINRYGDLISRVTLEITLPPLAAPQVPITGTSPVTYHPAADTAAHWVNCIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEEAIGRVQFSDAVDEDLIEKAKKQQILYVPLPLWFSKYQPATYGLALPIVALTFHDVRIKIKTRSISECTCVLYKDNAA-WKLAENQIPLNANTGTALVNADLKIRLMVTSVYLDTTERTAMSSVVHSFLISTAQRQVHSIAANQSTKQEEKLFFNHPASSLIWFVRPLDWNTEAGRRRFSCGFRDRYDFT-AHEASTDAS--LPYGDAVDPIRTASLTLNGHARWPTDMDSRYFRMHMPYCAWRTMPTTSIYTYSFALEAHQWQPTSHLNFSRLDHVSLGWTFCPNIKSSEAFSFVEAYNLLVIRDGLGG 589          
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835Z0V5_9STRA (Putative major capsid protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V5_9STRA)

HSP 1 Score: 543 bits (1398), Expect = 5.560e-190
Identity = 270/420 (64.29%), Postives = 333/420 (79.29%), Query Frame = 1
Query:   43 LDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYA--ETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
            +DDDFQELS SGF ++S+AT++RYGDLISRITLEI LP L AP +P   A  +    YA  +T A++VN IG+A WED  +EIGGS +DQL+SDF  IYEE+AGR G+RLEE++GRV +S  VD DLIEK+ + Q LYVPLPLWFSKY P+T+GLALPIVAL+FH+++LK+KTRSIA+C  VVYK+    W L+DLAP+N +TGT LVN+DLK+RL+VS VYLD TER AMS+V HS LIN TQRQV S+AAG   + E+KL+ NHP + LIW +RPLDWNT+ GRRRFSCG+KDRFDF+  E    D    L +G++VD I ++SLSLNGHQRWP DM + YFR   P+ +WRT+PST IYSYSFAL+A  WQPTSHLNFSRLDH+SLG +FA GIK+SE  +FVE+YNLLVI +GLGG
Sbjct:    1 MDDDFQELSNSGFDTSSSATINRYGDLISRITLEIRLPPLAAPQVPVVPA-TNPVTYYASEDTAAHWVNAIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEESIGRVPYSAEVDLDLIEKAQKAQILYVPLPLWFSKYQPSTYGLALPIVALTFHDVRLKIKTRSIADCTCVVYKED-DVWHLTDLAPLNASTGTTLVNADLKIRLMVSSVYLDTTERTAMSTVTHSFLINTTQRQVHSIAAGQSTRQEEKLYFNHPSSSLIWIVRPLDWNTQAGRRRFSCGFKDRFDFTAYEASDDDS---LIYGNAVDPIVSSSLSLNGHQRWPTDMPSTYFRTHVPYCNWRTLPSTSIYSYSFALEASAWQPTSHLNFSRLDHVSLGWSFAPGIKSSEAFSFVEAYNLLVIRDGLGG 415          
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835ZBK3_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBK3_9STRA)

HSP 1 Score: 544 bits (1401), Expect = 8.960e-190
Identity = 266/434 (61.29%), Postives = 340/434 (78.34%), Query Frame = 1
Query:    1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGD-WRLSD-LAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
            TI+++VHTRFTS A+DD+ QELS SGF ++S+AT++RYGDLISR++LEIVLP L AP+I    A  +A    A+  AYYVN IG+A WED  +EIGGS +DQL+SDF  I+EE+AGR GLRLEE +G+V +S  VDDDLIEK+SR+QTLYVPLPLW SKY PAT+GLALPIVAL+FH++++K+KTR IA+C  V ++DA    W L + L P+N  T T LVNSDLK+RL+++ VYLDVTER AMSSV HS LIN  QRQ+ +V A   +K E KL++NHPC+ + W +RPL+WNT  GRRRFSCG++DR+DFSH+E G+V  T  LP+G+++  I  ASLSLNGHQRWP DM ++YF    P+  WRTMP+TPI +YSFAL+A  WQPTS LNFSRLDH+SLG  F + ++ASE++ F E+YNLLVI +GLGG
Sbjct:   27 TIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTV--TSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGG 458          
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: Q8QNG3_ESV1K (EsV-1-116 n=4 Tax=root TaxID=1 RepID=Q8QNG3_ESV1K)

HSP 1 Score: 367 bits (943), Expect = 3.040e-120
Identity = 195/441 (44.22%), Postives = 283/441 (64.17%), Query Frame = 1
Query:    1 TIFKSVHTRFTSFALDDDFQELS--TSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWR-----LSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGGKL 1302
            T+FKS H R+T+FA D +  + S  T GF    +A +SRYGDL+S + LE+ LPA++A +     AG       A+  AY+VN IG+A+  +  +EIGG+ +D L+S++ F++EE+  R G RL E +G+ A+S  V++D+IE +S+E+ LYVPLP WF+KY     GL++P++AL++HEIK+K+  R +A+C +VVY+++   W       +D  PIN A+ +A+  SD+  RLLVSYVYLD  ER A +SV H  LI  TQRQ+ S+ + S    + KL+ NHP   LIW++RP D+     RRRFS G+KD FDFS Q+E   D T  + WGD  D++ +ASL+LNGH R+P  +   +FR V P   W   P+   Y ++FA     W PTS LN SR+DH+ L L +   I  S+++ F E+YNLLVI  G+GG++
Sbjct:    2 TLFKSQHKRYTNFAEDFEENDFSAGTVGFGQRVSANVSRYGDLVSDVLLEVTLPAIQASESVVNGAGTEVAD--ADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLGEQIGKFAYSADVEEDMIEFASQERKLYVPLPFWFNKYW-MEHGLSIPLIALTYHEIKIKVSFRPLADCCAVVYRESDPTWGDYWALAADKIPINTASASAMAASDMDARLLVSYVYLDQEERQAFASVQHEYLITTTQRQMHSITSASAKSDQLKLYFNHPSNALIWFVRPTDFKNL--RRRFSVGHKDMFDFSLQKE---DATVSM-WGDVTDSVASASLTLNGHSRFPDSLPGLFFRQVQPALKWPNTPAGYTYLFTFAALGGVWNPTSTLNMSRIDHVQLELKYGDNIPTSDVIVFNEAYNLLVIKEGMGGEV 433          
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: B5LWE8_9PHYC (Putative major capsid protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE8_9PHYC)

HSP 1 Score: 354 bits (908), Expect = 1.570e-115
Identity = 187/439 (42.60%), Postives = 274/439 (62.41%), Query Frame = 1
Query:    1 TIFKSVHTRFTSFALDDDFQELS--TSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYK---DAAGDW--RLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
            T+FK+VH R+TSFA D +  + S  T GF    +A +SRYGDL++ + +E+ LP ++A      + G       A+  AY+VN IG+A+  +  +EIGG+ +D L+ ++ F +E M  R G RL E +G+ A+S  V++D+IE + + +TLYVPLP WF+KY   T GL++P++AL++HEIK+K+  R ++EC  VVY+   +  G++        P+N  +G+ LV+SD+  +LL+SYVYLD  ER+A +S  HS LI  TQRQ+ ++ +   A  + KL+ NHP   L W++RP DW T   RRRFS G+ D FDFS   +  V       WGD +D + +ASL+LNGH R+P  M   +FR   P   W       +Y +SF+LQ   WQPTS LN SR+DH+ L L + S I  S++  F ESYNLLV+ +G+GG
Sbjct:    2 TLFKTVHKRYTSFAEDLEENDFSAGTVGFGQKVSANVSRYGDLVTDMFMEVALPPIEAAATVTNAEGVEVAD--ADKAAYWVNAIGYALISEIQIEIGGTEVDTLYPEWMFFWESMTQRPGARLGEQIGKFAYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMET-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRAEDETHGEYFALAEGKTPVNTTSGSTLVSSDMDAKLLISYVYLDKAERDAFASTEHSYLITRTQRQLHAITSAGSASDQIKLYFNHPSNCLAWFVRPTDWTTN--RRRFSVGHMDSFDFSLHTDSDVSV-----WGDVIDPVKSASLNLNGHSRFPDGMPGLFFRQTQPIMKWPNCSDGFMYVFSFSLQGGAWQPTSTLNMSRIDHVQLELKYGSNIPTSDVFVFAESYNLLVVKDGMGG 430          
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: Q6XLY6_9PHYC (FirrV-1-B50 n=2 Tax=root TaxID=1 RepID=Q6XLY6_9PHYC)

HSP 1 Score: 349 bits (895), Expect = 1.430e-113
Identity = 187/440 (42.50%), Postives = 275/440 (62.50%), Query Frame = 1
Query:    1 TIFKSVHTRFTSFALDDDFQELS--TSGFASTSTATLSRYGDLISRITLEIVLPALKAP-DIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKD---AAGDWRL--SDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
            T+FK+VH RFTSFA D +  + S  T GF    +AT+SRYGDL++ + +EI LP ++A  ++ D S    A A   +  AY+VN IG+A+  +  +EIGG+ +D L+ ++ F +EEM  R G RL E +G+  +S  V++D+IE + + +TLYVPLP WF+KY     GL++P++AL++HEIK+K+  R ++EC  VVY+      G++        P+N  +G+ LV+SD+  +LLVSYVYLD  ER+A ++  H+ LI  TQRQ+ ++ +   +  + KL+ NHP   L W++RP DW T   RRR+S G+ D FD+S +    V       WGD  D + TASL+LNGH R+P +M   +FR   P   W    +  +Y +SF+LQ   WQPTS LN SR+DH+ L L + + I  S +  F ESYNLLV+  G+GG
Sbjct:    2 TLFKTVHRRFTSFAEDLEENDFSAGTVGFGQKVSATISRYGDLVTDMFMEIHLPPIEAAVNVTDASGNTVADA---DKAAYWVNAIGFALISEVQIEIGGTEVDILYPEWMFFWEEMTQRPGARLGEQIGKFTYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMEA-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRTEDPTHGEYYALAEGKVPVNSTSGSTLVSSDMDAKLLVSYVYLDKKERDAFATTEHTYLITTTQRQMHAITSAGSSSDQIKLYFNHPSNCLTWFVRPTDWMTN--RRRYSVGHMDLFDYSLKSTSDVSV-----WGDVTDPVKTASLTLNGHSRFPDNMPGLFFRQTQPIMKWPNCSNGYMYVFSFSLQGGSWQPTSTLNMSRIDHVQLELKYGTSIPTSNVFVFAESYNLLVVKEGMGG 430          
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: Q4H484_HAV01 (Hypothetical major capsid protein n=1 Tax=Heterosigma akashiwo virus 01 TaxID=97195 RepID=Q4H484_HAV01)

HSP 1 Score: 183 bits (465), Expect = 1.570e-49
Identity = 145/449 (32.29%), Postives = 226/449 (50.33%), Query Frame = 1
Query:    1 TIFKSVHTRFTSFALDDDFQELS-TSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLR--LEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMN--HPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISL-----GLTFASGI-------KASELVAFVESYNLLVIANGLGG 1296
            T FK V+ R T+FA++   Q  + T+ F    T T+SR GDLI+ + L++ LP+L       T   AS    Y      + N IG A+  +  +EIGG  ID+ F  +  I++E+      +    + +G+ A SE     LI  S  E+  Y+PL  WF + NP   GL+LP+VAL +HE+K+ ++ R+  EC+  V   A GD     +A  + AT      +    +L V Y+YLD  ER   ++ +H  L+   Q Q     + S+++  QKL +N  HP  +L+W L+  + +T  G       Y D F+FS    G+  P+       +VD +  A L LNGH+R+    +  YFR+V P+     +P   IY YSFA++  + QP+   NFSR+D + L      L+  +GI          ++  F  +YN+L I +G+ G
Sbjct:   25 TFFKVVYRRHTNFAIESIEQTFNGTADFGKKVTCTISRNGDLINHVYLQVQLPSLS------TGLVASGSPTYVS----WTNAIGHALIRNVEVEIGGQRIDRQFGTWLEIWDELTMTTEKKNGYNQMIGKYA-SEL---GLIGNSYYERIYYIPLQFWFCR-NP---GLSLPLVALQYHEVKIIIEFRNAHECI--VALKANGDR----VAIGDNATTFTTTPTITNAQLYVDYIYLDTNERKLFAATSHEYLVE--QLQFTGAESLSFSQQNQKLRLNFNHPVKELLWVLQRDENSTSAG-----TAYNDWFNFSAAAPGTPSPSH------AVDLLADAKLLLNGHERFTVRPQT-YFRLVQPYQHHTRIPDKHIYLYSFAIRPEEHQPSGTCNFSRIDTVQLVYDLTSLSTLTGIGTGMDTASTGQISVFAVNYNVLRIVSGMAG 435          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z3V1_9STRA0.000e+0100.00Putative major capsid protein n=1 Tax=Tribonema mi... [more]
A0A835Z566_9STRA1.340e-27684.72FirrV-1-B50 n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZCT3_9STRA2.740e-25281.60FirrV-1-B50 n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835Z4S3_9STRA8.600e-20064.67Large eukaryotic DNA virus major capsid protein-do... [more]
A0A835Z0V5_9STRA5.560e-19064.29Putative major capsid protein n=3 Tax=Tribonema mi... [more]
A0A835ZBK3_9STRA8.960e-19061.29Putative major capsid protein n=1 Tax=Tribonema mi... [more]
Q8QNG3_ESV1K3.040e-12044.22EsV-1-116 n=4 Tax=root TaxID=1 RepID=Q8QNG3_ESV1K[more]
B5LWE8_9PHYC1.570e-11542.60Putative major capsid protein n=1 Tax=Feldmannia s... [more]
Q6XLY6_9PHYC1.430e-11342.50FirrV-1-B50 n=2 Tax=root TaxID=1 RepID=Q6XLY6_9PHY... [more]
Q4H484_HAV011.570e-4932.29Hypothetical major capsid protein n=1 Tax=Heterosi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:1103622..1104926 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|156944|e_gw1.2.304.1
GOsGO:0005575,GO:0019012
DescriptionLarge eukaryotic DNA virus major capsid protein
COG categoryS
Max annot lvl10239|Viruses
EggNOG OGs4QAX7@10239|Viruses,4QXNA@35237|dsDNA viruses no RNA stage
Evalue4.99e-121
Seed ortholog654926.Q8QNG3_ESV1K
Hectar predicted targeting categoryother localisation
TranscriptId157266
TrackFilteredModels1
ProteinId156944
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156944gene_670Tribonema minus UTEX_B_3156 geneContig_2 1103622..1104926 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_670_1exon_670_1Tribonema minus UTEX_B_3156 exonContig_2 1103622..1104926 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_670CDS_670Tribonema minus UTEX_B_3156 CDSContig_2 1103622..1104926 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156944Trimin1|156944|e_gw1.2.304.1Tribonema minus UTEX_B_3156 polypeptideContig_2 1103622..1104926 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_670 ID=mRNA_670|Name=jgi.p|Trimin1|156944|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1305bp|location=Sequence derived from alignment at Contig_2:1103622..1104926+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACTATTTTCAAGTCCGTACACACCCGTTTCACTTCCTTTGCCCTAGACGA
TGATTTCCAGGAGCTGTCCACCAGCGGCTTCGCCTCCACGTCTACCGCCA
CCCTTTCCCGTTACGGTGACCTGATCTCCCGCATCACGCTGGAGATCGTG
CTCCCCGCCCTCAAGGCCCCCGATATCCCGGACACCTCCGCCGGCGCGTC
CGCCGGTGCCCTGTACGCCGAGACCGGTGCCTACTACGTCAACTGCATCG
GCTGGGCCGTGTGGGAGGACTGCATCCTTGAGATCGGTGGCTCTACCATC
GACCAGCTCTTCAGCGACTTCTGCTTCATCTACGAGGAGATGGCTGGCCG
TGCTGGCCTGCGCCTGGAGGAGGCCGTCGGCCGCGTGGCTTTCTCTGAGG
CCGTTGATGATGACCTCATTGAGAAGTCCTCTAGGGAACAGACACTTTAC
GTGCCTCTTCCCCTGTGGTTTTCTAAGTACAACCCGGCTACTTTCGGCCT
GGCGCTGCCCATCGTTGCGCTCAGTTTTCATGAGATTAAATTGAAGCTGA
AGACCCGCTCCATCGCCGAGTGCGTCTCCGTGGTATACAAGGATGCTGCT
GGCGACTGGCGTCTTAGCGACCTCGCCCCCATCAACAAGGCTACCGGCAC
CGCGCTGGTCAACAGCGACCTCAAGATGCGCCTGCTGGTGTCCTACGTCT
ACCTTGATGTCACAGAGCGTAACGCCATGAGCAGCGTGGCCCACTCAATG
CTCATCAACGTTACCCAGCGCCAGGTCATGAGCGTGGCCGCCGGGTCGTA
CGCGAAGAGCGAACAAAAGCTCTTTATGAACCACCCCTGCACTGATTTGA
TCTGGTACCTGCGGCCTCTGGACTGGAACACCGAGGGCGGTCGCCGCCGT
TTCTCCTGCGGCTACAAGGACCGCTTCGATTTCTCTCATCAGGAGGAAGG
CAGCGTTGACCCGACTAAGGGCCTCCCTTGGGGCGACTCGGTGGACGCAA
TCACGACTGCGTCGCTTTCGCTCAACGGACACCAGCGTTGGCCGGCAGAC
ATGAAGGCTAACTACTTCCGTGTGGTGACACCTTGGACGAGCTGGCGCAC
GATGCCTTCCACGCCCATCTACTCCTACTCTTTCGCGCTCCAGGCGCATG
ACTGGCAACCTACGTCGCATCTTAATTTCAGTCGCCTCGACCACATCTCG
CTAGGCCTCACGTTTGCCAGCGGGATCAAGGCGTCTGAGCTGGTTGCCTT
CGTTGAGTCGTACAACCTGTTGGTCATCGCGAACGGGCTCGGTGGTAAAC
TTTGA
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protein sequence of jgi.p|Trimin1|156944

>Trimin1|156944|e_gw1.2.304.1 ID=Trimin1|156944|e_gw1.2.304.1|Name=jgi.p|Trimin1|156944|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=435bp
TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIV
LPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTI
DQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLY
VPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAA
GDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSM
LINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRR
FSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPAD
MKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHIS
LGLTFASGIKASELVAFVESYNLLVIANGLGGKL*
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mRNA from alignment at Contig_2:1103622..1104926+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_670 ID=mRNA_670|Name=jgi.p|Trimin1|156944|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1305bp|location=Sequence derived from alignment at Contig_2:1103622..1104926+ (Tribonema minus UTEX_B_3156 )
ACTATTTTCAAGTCCGTACACACCCGTTTCACTTCCTTTGCCCTAGACGA TGATTTCCAGGAGCTGTCCACCAGCGGCTTCGCCTCCACGTCTACCGCCA CCCTTTCCCGTTACGGTGACCTGATCTCCCGCATCACGCTGGAGATCGTG CTCCCCGCCCTCAAGGCCCCCGATATCCCGGACACCTCCGCCGGCGCGTC CGCCGGTGCCCTGTACGCCGAGACCGGTGCCTACTACGTCAACTGCATCG GCTGGGCCGTGTGGGAGGACTGCATCCTTGAGATCGGTGGCTCTACCATC GACCAGCTCTTCAGCGACTTCTGCTTCATCTACGAGGAGATGGCTGGCCG TGCTGGCCTGCGCCTGGAGGAGGCCGTCGGCCGCGTGGCTTTCTCTGAGG CCGTTGATGATGACCTCATTGAGAAGTCCTCTAGGGAACAGACACTTTAC GTGCCTCTTCCCCTGTGGTTTTCTAAGTACAACCCGGCTACTTTCGGCCT GGCGCTGCCCATCGTTGCGCTCAGTTTTCATGAGATTAAATTGAAGCTGA AGACCCGCTCCATCGCCGAGTGCGTCTCCGTGGTATACAAGGATGCTGCT GGCGACTGGCGTCTTAGCGACCTCGCCCCCATCAACAAGGCTACCGGCAC CGCGCTGGTCAACAGCGACCTCAAGATGCGCCTGCTGGTGTCCTACGTCT ACCTTGATGTCACAGAGCGTAACGCCATGAGCAGCGTGGCCCACTCAATG CTCATCAACGTTACCCAGCGCCAGGTCATGAGCGTGGCCGCCGGGTCGTA CGCGAAGAGCGAACAAAAGCTCTTTATGAACCACCCCTGCACTGATTTGA TCTGGTACCTGCGGCCTCTGGACTGGAACACCGAGGGCGGTCGCCGCCGT TTCTCCTGCGGCTACAAGGACCGCTTCGATTTCTCTCATCAGGAGGAAGG CAGCGTTGACCCGACTAAGGGCCTCCCTTGGGGCGACTCGGTGGACGCAA TCACGACTGCGTCGCTTTCGCTCAACGGACACCAGCGTTGGCCGGCAGAC ATGAAGGCTAACTACTTCCGTGTGGTGACACCTTGGACGAGCTGGCGCAC GATGCCTTCCACGCCCATCTACTCCTACTCTTTCGCGCTCCAGGCGCATG ACTGGCAACCTACGTCGCATCTTAATTTCAGTCGCCTCGACCACATCTCG CTAGGCCTCACGTTTGCCAGCGGGATCAAGGCGTCTGAGCTGGTTGCCTT CGTTGAGTCGTACAACCTGTTGGTCATCGCGAACGGGCTCGGTGGTAAAC TTTGA
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Coding sequence (CDS) from alignment at Contig_2:1103622..1104926+

>mRNA_670 ID=mRNA_670|Name=jgi.p|Trimin1|156944|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1305bp|location=Sequence derived from alignment at Contig_2:1103622..1104926+ (Tribonema minus UTEX_B_3156 )
ACTATTTTCAAGTCCGTACACACCCGTTTCACTTCCTTTGCCCTAGACGA
TGATTTCCAGGAGCTGTCCACCAGCGGCTTCGCCTCCACGTCTACCGCCA
CCCTTTCCCGTTACGGTGACCTGATCTCCCGCATCACGCTGGAGATCGTG
CTCCCCGCCCTCAAGGCCCCCGATATCCCGGACACCTCCGCCGGCGCGTC
CGCCGGTGCCCTGTACGCCGAGACCGGTGCCTACTACGTCAACTGCATCG
GCTGGGCCGTGTGGGAGGACTGCATCCTTGAGATCGGTGGCTCTACCATC
GACCAGCTCTTCAGCGACTTCTGCTTCATCTACGAGGAGATGGCTGGCCG
TGCTGGCCTGCGCCTGGAGGAGGCCGTCGGCCGCGTGGCTTTCTCTGAGG
CCGTTGATGATGACCTCATTGAGAAGTCCTCTAGGGAACAGACACTTTAC
GTGCCTCTTCCCCTGTGGTTTTCTAAGTACAACCCGGCTACTTTCGGCCT
GGCGCTGCCCATCGTTGCGCTCAGTTTTCATGAGATTAAATTGAAGCTGA
AGACCCGCTCCATCGCCGAGTGCGTCTCCGTGGTATACAAGGATGCTGCT
GGCGACTGGCGTCTTAGCGACCTCGCCCCCATCAACAAGGCTACCGGCAC
CGCGCTGGTCAACAGCGACCTCAAGATGCGCCTGCTGGTGTCCTACGTCT
ACCTTGATGTCACAGAGCGTAACGCCATGAGCAGCGTGGCCCACTCAATG
CTCATCAACGTTACCCAGCGCCAGGTCATGAGCGTGGCCGCCGGGTCGTA
CGCGAAGAGCGAACAAAAGCTCTTTATGAACCACCCCTGCACTGATTTGA
TCTGGTACCTGCGGCCTCTGGACTGGAACACCGAGGGCGGTCGCCGCCGT
TTCTCCTGCGGCTACAAGGACCGCTTCGATTTCTCTCATCAGGAGGAAGG
CAGCGTTGACCCGACTAAGGGCCTCCCTTGGGGCGACTCGGTGGACGCAA
TCACGACTGCGTCGCTTTCGCTCAACGGACACCAGCGTTGGCCGGCAGAC
ATGAAGGCTAACTACTTCCGTGTGGTGACACCTTGGACGAGCTGGCGCAC
GATGCCTTCCACGCCCATCTACTCCTACTCTTTCGCGCTCCAGGCGCATG
ACTGGCAACCTACGTCGCATCTTAATTTCAGTCGCCTCGACCACATCTCG
CTAGGCCTCACGTTTGCCAGCGGGATCAAGGCGTCTGAGCTGGTTGCCTT
CGTTGAGTCGTACAACCTGTTGGTCATCGCGAACGGGCTCGGTGGTAAAC
TTTGA
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