mRNA_670 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835Z3V1_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V1_9STRA) HSP 1 Score: 870 bits (2248), Expect = 0.000e+0 Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 1
Query: 1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGGKL 1302
TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGGKL
Sbjct: 1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGGKL 434
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835Z566_9STRA (FirrV-1-B50 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z566_9STRA) HSP 1 Score: 763 bits (1969), Expect = 1.340e-276 Identity = 366/432 (84.72%), Postives = 408/432 (94.44%), Query Frame = 1
Query: 1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
TI+KSVHTRFTS ALDD+FQELSTSGFASTSTAT+SRYGDL+SRITLEIVLP L APDIPDTSAGA AGALYA+TGA+YVNCIG+A WEDCI+EIGGST+DQLFSDFCFIYEE+AGRAG+RLEEA+GRV FS VD+DLIEKS+REQTLYVPLPLWFSKY PAT+GLALPIVALSFHEIKLKLKTRSIAECVSV+YKD+AGDWRLSDLAPIN TGTALVNSD+K+RLLVS+VYLDVTERNAMSSVAHS LINVTQRQVM+VAAGS++K E KLF NHPC+ L+WY+RPLDWNTEGGRRRFSCGYKDR+DFSHQ++GSVD TKGLPWGD++DAITTASLSLNGHQRWP D + YFRV+TP+TSWRTMP+T IY+YSFALQAHDWQPT+HLNFSR +H+SLGLTFA+GIKASEL+A VESYNLL+IANGLGG
Sbjct: 1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGG 432
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835ZCT3_9STRA (FirrV-1-B50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT3_9STRA) HSP 1 Score: 703 bits (1814), Expect = 2.740e-252 Identity = 346/424 (81.60%), Postives = 382/424 (90.09%), Query Frame = 1
Query: 10 KSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISL--GLTFASGIKASELVAFVESYNLLV 1275
++VHTRFTS ALDD+FQELSTSGFASTSTAT+SRYGDL+SRITLEIVLP L APDIPDTS+GA AGA YA+T AYYVN I +A WED ILEIGGST+DQLFSDFCFIYEE+AGRAG+RLEEA+GRV FS VD+DL EKS+REQTLYVPLPLWFSKY PAT+GLALPIVALSFHEIKLKLKTRSIAECVSVVYKD+AGDWRLSDLAPIN TGTALVNSD+K+RLLVS+VYLDVTERNAMSSVAHS LINVTQRQVM+VAAGS++K E KLF NHPC+ L+WY+RP DWN EGGRRRFSCGYKDRFDFSHQE+G+VD TKGL WGD+VD ITTAS SLNGHQRWP D A YFRV+TP+TSWRTMP+T IY+YSFALQA DWQPT+HLN SRL L GLTFA+GIKASEL+A VESYNLL+
Sbjct: 40 RAVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSSGAGAGAHYADTAAYYVNSIDFAAWEDVILEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLAEKSAREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDSAGDWRLSDLAPINATTGTALVNSDMKLRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPQDWNLEGGRRRFSCGYKDRFDFSHQEQGTVDATKGLAWGDTVDPITTASRSLNGHQRWPQDQNAVYFRVLTPYTSWRTMPTTNIYTYSFALQAQDWQPTAHLNMSRLKKTGLKNGLTFAAGIKASELIAMVESYNLLI 463
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835Z4S3_9STRA (Large eukaryotic DNA virus major capsid protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S3_9STRA) HSP 1 Score: 574 bits (1480), Expect = 8.600e-200 Identity = 280/433 (64.67%), Postives = 350/433 (80.83%), Query Frame = 1
Query: 1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSD-LAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
TI++SVHTRFTS A+DD+FQ+LS SGF ++S+AT++RYGDLISR+TLEI LP L AP +P T A+T A++VNCIG+A WED +EIGGS +DQL+SDF IYEE+AGR G+RLEEA+GRV FS+AVD+DLIEK+ ++Q LYVPLPLWFSKY PAT+GLALPIVAL+FH++++K+KTRSI+EC V+YKD A W+L++ P+N TGTALVN+DLK+RL+V+ VYLD TER AMSSV HS LI+ QRQV S+AA K E+KLF NHP + LIW++RPLDWNTE GRRRFSCG++DR+DF+ E S D + LP+GD+VD I TASL+LNGH RWP DM + YFR+ P+ +WRTMP+T IY+YSFAL+AH WQPTSHLNFSRLDH+SLG TF IK+SE +FVE+YNLLVI +GLGG
Sbjct: 161 TIWRSVHTRFTSCAMDDEFQDLSNSGFDTSSSATINRYGDLISRVTLEITLPPLAAPQVPITGTSPVTYHPAADTAAHWVNCIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEEAIGRVQFSDAVDEDLIEKAKKQQILYVPLPLWFSKYQPATYGLALPIVALTFHDVRIKIKTRSISECTCVLYKDNAA-WKLAENQIPLNANTGTALVNADLKIRLMVTSVYLDTTERTAMSSVVHSFLISTAQRQVHSIAANQSTKQEEKLFFNHPASSLIWFVRPLDWNTEAGRRRFSCGFRDRYDFT-AHEASTDAS--LPYGDAVDPIRTASLTLNGHARWPTDMDSRYFRMHMPYCAWRTMPTTSIYTYSFALEAHQWQPTSHLNFSRLDHVSLGWTFCPNIKSSEAFSFVEAYNLLVIRDGLGG 589
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835Z0V5_9STRA (Putative major capsid protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V5_9STRA) HSP 1 Score: 543 bits (1398), Expect = 5.560e-190 Identity = 270/420 (64.29%), Postives = 333/420 (79.29%), Query Frame = 1
Query: 43 LDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYA--ETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
+DDDFQELS SGF ++S+AT++RYGDLISRITLEI LP L AP +P A + YA +T A++VN IG+A WED +EIGGS +DQL+SDF IYEE+AGR G+RLEE++GRV +S VD DLIEK+ + Q LYVPLPLWFSKY P+T+GLALPIVAL+FH+++LK+KTRSIA+C VVYK+ W L+DLAP+N +TGT LVN+DLK+RL+VS VYLD TER AMS+V HS LIN TQRQV S+AAG + E+KL+ NHP + LIW +RPLDWNT+ GRRRFSCG+KDRFDF+ E D L +G++VD I ++SLSLNGHQRWP DM + YFR P+ +WRT+PST IYSYSFAL+A WQPTSHLNFSRLDH+SLG +FA GIK+SE +FVE+YNLLVI +GLGG
Sbjct: 1 MDDDFQELSNSGFDTSSSATINRYGDLISRITLEIRLPPLAAPQVPVVPA-TNPVTYYASEDTAAHWVNAIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEESIGRVPYSAEVDLDLIEKAQKAQILYVPLPLWFSKYQPSTYGLALPIVALTFHDVRLKIKTRSIADCTCVVYKED-DVWHLTDLAPLNASTGTTLVNADLKIRLMVSSVYLDTTERTAMSTVTHSFLINTTQRQVHSIAAGQSTRQEEKLYFNHPSSSLIWIVRPLDWNTQAGRRRFSCGFKDRFDFTAYEASDDDS---LIYGNAVDPIVSSSLSLNGHQRWPTDMPSTYFRTHVPYCNWRTLPSTSIYSYSFALEASAWQPTSHLNFSRLDHVSLGWSFAPGIKSSEAFSFVEAYNLLVIRDGLGG 415
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: A0A835ZBK3_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBK3_9STRA) HSP 1 Score: 544 bits (1401), Expect = 8.960e-190 Identity = 266/434 (61.29%), Postives = 340/434 (78.34%), Query Frame = 1
Query: 1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGD-WRLSD-LAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
TI+++VHTRFTS A+DD+ QELS SGF ++S+AT++RYGDLISR++LEIVLP L AP+I A +A A+ AYYVN IG+A WED +EIGGS +DQL+SDF I+EE+AGR GLRLEE +G+V +S VDDDLIEK+SR+QTLYVPLPLW SKY PAT+GLALPIVAL+FH++++K+KTR IA+C V ++DA W L + L P+N T T LVNSDLK+RL+++ VYLDVTER AMSSV HS LIN QRQ+ +V A +K E KL++NHPC+ + W +RPL+WNT GRRRFSCG++DR+DFSH+E G+V T LP+G+++ I ASLSLNGHQRWP DM ++YF P+ WRTMP+TPI +YSFAL+A WQPTS LNFSRLDH+SLG F + ++ASE++ F E+YNLLVI +GLGG
Sbjct: 27 TIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTV--TSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGG 458
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: Q8QNG3_ESV1K (EsV-1-116 n=4 Tax=root TaxID=1 RepID=Q8QNG3_ESV1K) HSP 1 Score: 367 bits (943), Expect = 3.040e-120 Identity = 195/441 (44.22%), Postives = 283/441 (64.17%), Query Frame = 1
Query: 1 TIFKSVHTRFTSFALDDDFQELS--TSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWR-----LSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGGKL 1302
T+FKS H R+T+FA D + + S T GF +A +SRYGDL+S + LE+ LPA++A + AG A+ AY+VN IG+A+ + +EIGG+ +D L+S++ F++EE+ R G RL E +G+ A+S V++D+IE +S+E+ LYVPLP WF+KY GL++P++AL++HEIK+K+ R +A+C +VVY+++ W +D PIN A+ +A+ SD+ RLLVSYVYLD ER A +SV H LI TQRQ+ S+ + S + KL+ NHP LIW++RP D+ RRRFS G+KD FDFS Q+E D T + WGD D++ +ASL+LNGH R+P + +FR V P W P+ Y ++FA W PTS LN SR+DH+ L L + I S+++ F E+YNLLVI G+GG++
Sbjct: 2 TLFKSQHKRYTNFAEDFEENDFSAGTVGFGQRVSANVSRYGDLVSDVLLEVTLPAIQASESVVNGAGTEVAD--ADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLGEQIGKFAYSADVEEDMIEFASQERKLYVPLPFWFNKYW-MEHGLSIPLIALTYHEIKIKVSFRPLADCCAVVYRESDPTWGDYWALAADKIPINTASASAMAASDMDARLLVSYVYLDQEERQAFASVQHEYLITTTQRQMHSITSASAKSDQLKLYFNHPSNALIWFVRPTDFKNL--RRRFSVGHKDMFDFSLQKE---DATVSM-WGDVTDSVASASLTLNGHSRFPDSLPGLFFRQVQPALKWPNTPAGYTYLFTFAALGGVWNPTSTLNMSRIDHVQLELKYGDNIPTSDVIVFNEAYNLLVIKEGMGGEV 433
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: B5LWE8_9PHYC (Putative major capsid protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE8_9PHYC) HSP 1 Score: 354 bits (908), Expect = 1.570e-115 Identity = 187/439 (42.60%), Postives = 274/439 (62.41%), Query Frame = 1
Query: 1 TIFKSVHTRFTSFALDDDFQELS--TSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYK---DAAGDW--RLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
T+FK+VH R+TSFA D + + S T GF +A +SRYGDL++ + +E+ LP ++A + G A+ AY+VN IG+A+ + +EIGG+ +D L+ ++ F +E M R G RL E +G+ A+S V++D+IE + + +TLYVPLP WF+KY T GL++P++AL++HEIK+K+ R ++EC VVY+ + G++ P+N +G+ LV+SD+ +LL+SYVYLD ER+A +S HS LI TQRQ+ ++ + A + KL+ NHP L W++RP DW T RRRFS G+ D FDFS + V WGD +D + +ASL+LNGH R+P M +FR P W +Y +SF+LQ WQPTS LN SR+DH+ L L + S I S++ F ESYNLLV+ +G+GG
Sbjct: 2 TLFKTVHKRYTSFAEDLEENDFSAGTVGFGQKVSANVSRYGDLVTDMFMEVALPPIEAAATVTNAEGVEVAD--ADKAAYWVNAIGYALISEIQIEIGGTEVDTLYPEWMFFWESMTQRPGARLGEQIGKFAYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMET-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRAEDETHGEYFALAEGKTPVNTTSGSTLVSSDMDAKLLISYVYLDKAERDAFASTEHSYLITRTQRQLHAITSAGSASDQIKLYFNHPSNCLAWFVRPTDWTTN--RRRFSVGHMDSFDFSLHTDSDVSV-----WGDVIDPVKSASLNLNGHSRFPDGMPGLFFRQTQPIMKWPNCSDGFMYVFSFSLQGGAWQPTSTLNMSRIDHVQLELKYGSNIPTSDVFVFAESYNLLVVKDGMGG 430
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: Q6XLY6_9PHYC (FirrV-1-B50 n=2 Tax=root TaxID=1 RepID=Q6XLY6_9PHYC) HSP 1 Score: 349 bits (895), Expect = 1.430e-113 Identity = 187/440 (42.50%), Postives = 275/440 (62.50%), Query Frame = 1
Query: 1 TIFKSVHTRFTSFALDDDFQELS--TSGFASTSTATLSRYGDLISRITLEIVLPALKAP-DIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKD---AAGDWRL--SDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 1296
T+FK+VH RFTSFA D + + S T GF +AT+SRYGDL++ + +EI LP ++A ++ D S A A + AY+VN IG+A+ + +EIGG+ +D L+ ++ F +EEM R G RL E +G+ +S V++D+IE + + +TLYVPLP WF+KY GL++P++AL++HEIK+K+ R ++EC VVY+ G++ P+N +G+ LV+SD+ +LLVSYVYLD ER+A ++ H+ LI TQRQ+ ++ + + + KL+ NHP L W++RP DW T RRR+S G+ D FD+S + V WGD D + TASL+LNGH R+P +M +FR P W + +Y +SF+LQ WQPTS LN SR+DH+ L L + + I S + F ESYNLLV+ G+GG
Sbjct: 2 TLFKTVHRRFTSFAEDLEENDFSAGTVGFGQKVSATISRYGDLVTDMFMEIHLPPIEAAVNVTDASGNTVADA---DKAAYWVNAIGFALISEVQIEIGGTEVDILYPEWMFFWEEMTQRPGARLGEQIGKFTYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMEA-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRTEDPTHGEYYALAEGKVPVNSTSGSTLVSSDMDAKLLVSYVYLDKKERDAFATTEHTYLITTTQRQMHAITSAGSSSDQIKLYFNHPSNCLTWFVRPTDWMTN--RRRYSVGHMDLFDYSLKSTSDVSV-----WGDVTDPVKTASLTLNGHSRFPDNMPGLFFRQTQPIMKWPNCSNGYMYVFSFSLQGGSWQPTSTLNMSRIDHVQLELKYGTSIPTSNVFVFAESYNLLVVKEGMGG 430
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Match: Q4H484_HAV01 (Hypothetical major capsid protein n=1 Tax=Heterosigma akashiwo virus 01 TaxID=97195 RepID=Q4H484_HAV01) HSP 1 Score: 183 bits (465), Expect = 1.570e-49 Identity = 145/449 (32.29%), Postives = 226/449 (50.33%), Query Frame = 1
Query: 1 TIFKSVHTRFTSFALDDDFQELS-TSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLR--LEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMN--HPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISL-----GLTFASGI-------KASELVAFVESYNLLVIANGLGG 1296
T FK V+ R T+FA++ Q + T+ F T T+SR GDLI+ + L++ LP+L T AS Y + N IG A+ + +EIGG ID+ F + I++E+ + + +G+ A SE LI S E+ Y+PL WF + NP GL+LP+VAL +HE+K+ ++ R+ EC+ V A GD +A + AT + +L V Y+YLD ER ++ +H L+ Q Q + S+++ QKL +N HP +L+W L+ + +T G Y D F+FS G+ P+ +VD + A L LNGH+R+ + YFR+V P+ +P IY YSFA++ + QP+ NFSR+D + L L+ +GI ++ F +YN+L I +G+ G
Sbjct: 25 TFFKVVYRRHTNFAIESIEQTFNGTADFGKKVTCTISRNGDLINHVYLQVQLPSLS------TGLVASGSPTYVS----WTNAIGHALIRNVEVEIGGQRIDRQFGTWLEIWDELTMTTEKKNGYNQMIGKYA-SEL---GLIGNSYYERIYYIPLQFWFCR-NP---GLSLPLVALQYHEVKIIIEFRNAHECI--VALKANGDR----VAIGDNATTFTTTPTITNAQLYVDYIYLDTNERKLFAATSHEYLVE--QLQFTGAESLSFSQQNQKLRLNFNHPVKELLWVLQRDENSTSAG-----TAYNDWFNFSAAAPGTPSPSH------AVDLLADAKLLLNGHERFTVRPQT-YFRLVQPYQHHTRIPDKHIYLYSFAIRPEEHQPSGTCNFSRIDTVQLVYDLTSLSTLTGIGTGMDTASTGQISVFAVNYNVLRIVSGMAG 435 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156944 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_670 ID=mRNA_670|Name=jgi.p|Trimin1|156944|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1305bp|location=Sequence derived from alignment at Contig_2:1103622..1104926+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ACTATTTTCAAGTCCGTACACACCCGTTTCACTTCCTTTGCCCTAGACGAback to top protein sequence of jgi.p|Trimin1|156944 >Trimin1|156944|e_gw1.2.304.1 ID=Trimin1|156944|e_gw1.2.304.1|Name=jgi.p|Trimin1|156944|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=435bp TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVback to top mRNA from alignment at Contig_2:1103622..1104926+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_670 ID=mRNA_670|Name=jgi.p|Trimin1|156944|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1305bp|location=Sequence derived from alignment at Contig_2:1103622..1104926+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:1103622..1104926+ >mRNA_670 ID=mRNA_670|Name=jgi.p|Trimin1|156944|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1305bp|location=Sequence derived from alignment at Contig_2:1103622..1104926+ (Tribonema minus UTEX_B_3156 )back to top |