mRNA_6656 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|49056
Unique NamemRNA_6656
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: A0A835Z8S5_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S5_9STRA)

HSP 1 Score: 1078 bits (2789), Expect = 0.000e+0
Identity = 549/549 (100.00%), Postives = 549/549 (100.00%), Query Frame = 2
Query:   26 MKSALVSSLLFAGAAAFVPSNAPAKSGSFTRSSRQLAAARSNRMSMSAHTFDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN 1672
            MKSALVSSLLFAGAAAFVPSNAPAKSGSFTRSSRQLAAARSNRMSMSAHTFDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN
Sbjct:    1 MKSALVSSLLFAGAAAFVPSNAPAKSGSFTRSSRQLAAARSNRMSMSAHTFDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN 549          
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: D7FQZ4_ECTSI (Acetohydroxy-acid reductoisomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ4_ECTSI)

HSP 1 Score: 790 bits (2041), Expect = 9.760e-283
Identity = 406/568 (71.48%), Postives = 468/568 (82.39%), Query Frame = 2
Query:   26 MKS-ALVSSLLFAGAAAFVPSNAPAKSGSFT------------------RSSRQLAAARSNRMSMSAHT-FDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVL 1669
            MKS A+  SLL AGA+AF     P  SGS+                   R++   AA+    +SM  H  F+TK+F K  I L GTEE++VKGGRDLF LL  AF+GI++IGV+GWGSQAPAQAQNIRDS+EAAG+DIPV IGLREGSASY+LA+ VGFSE+ GTLG+MY+ I +SDLVI+LISD+ +A  ++K+F  +K GATLGLSHGFLLGHL+++G+KFPD+INVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDV G+AT+IALGWSIALGSPFSF TTLTDEY+SDIYGERGILLGAVH I+E+L RR+ ++GM+ EEAFKQS ESITGPITK IS  G+LKLY  L    + +F+  YSA Y PA+EI+QECY+EV SGNEIRSVVM G RL +   GKIDGT TW+VGE+VRA R E++IPLNPFTAGVYVA MMAQIDVL++ GHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDN + ++D+LI DFL NPVHDAIRVC ELRP VDISCAAPSTVKEI L
Sbjct:    1 MKSTAVCCSLLVAGASAFT---GPLPSGSWVKPVTPTSNARSPWAVSAPRAATTAAASGRTALSMGVHMEFETKVFEKQRIALGGTEEDVVKGGRDLFELLPTAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGVDIPVKIGLREGSASYKLAQNVGFSEDNGTLGEMYETIEESDLVILLISDSAMASNHEKVFSKLKKGATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVTGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKMGILKLYESLDQAGKDEFKSVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKVGEQVRADRVEEEIPLNPFTAGVYVATMMAQIDVLKEGGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNGSAVDDSLISDFLENPVHDAIRVCSELRPAVDISCAAPSTVKEIAL 565          
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: A0A7S2W6X2_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6X2_9STRA)

HSP 1 Score: 785 bits (2027), Expect = 1.050e-280
Identity = 402/546 (73.63%), Postives = 457/546 (83.70%), Query Frame = 2
Query:   38 LVSSLLFAGAAAFVPSNAPAKSGSFTRSSRQLAA--ARSNRMSMSAHTFDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVL 1669
            LV  L  A AAAF P   P  S +FTRS        ARS  +     + +T IF    I L+GT+EEIV+GGRDLF  L +AFKGI+ IGVIGWGSQAPAQAQN+RDS+E  G  I V IGLREGS+S+ELAR VGF+E+ GTLG+M++ IA+SDLV++LISDA  A  YK+IF  +KPGATLGLSHGFLLGHLESIGE+FPDNINV+AVCPKGMGPSVRRLYEQGK+VNG+GIN+SF VHQDV GRATEIALGW IALGSPF F TTLT+EYKSDIYGERGILLG VH IVESL RRY  +GMT E+AFK SCESITGPITK IS +G++ LY  LS  D++ F  AYSASYLP+REILQECYDEVASGNEIRSV++HG RL EFPIGKIDGT+TWQVGEKVRAARDEDKIPLN FTAGVYVA+MMAQIDVLRKAGHS++E+VNESVIEAVDSLCPYMH+KGVAFMVDNCS+TARLGSRKWAPRFDYIL+QLAYTA+D  A +N  LI++F +NPVH AI +C +LRP VDISCAAPSTVKE+ L
Sbjct:   17 LVLVLCLAAAAAFAPRR-PVASRAFTRSPLLSGRPQARSAPVLAVRDSIETDIFSPETIDLSGTQEEIVRGGRDLFDKLPEAFKGIESIGVIGWGSQAPAQAQNLRDSLEGTG--IKVKIGLREGSSSFELARGVGFTEDEGTLGEMFETIAESDLVVLLISDAAQAAMYKEIFAAMKPGATLGLSHGFLLGHLESIGEEFPDNINVIAVCPKGMGPSVRRLYEQGKSVNGAGINSSFGVHQDVTGRATEIALGWGIALGSPFMFKTTLTEEYKSDIYGERGILLGGVHGIVESLFRRYVAQGMTPEDAFKNSCESITGPITKKISKEGIMALYEGLSDEDKKVFEEAYSASYLPSREILQECYDEVASGNEIRSVILHGARLSEFPIGKIDGTYTWQVGEKVRAARDEDKIPLNSFTAGVYVAMMMAQIDVLRKAGHSFSEVVNESVIEAVDSLCPYMHFKGVAFMVDNCSMTARLGSRKWAPRFDYILDQLAYTAIDKGASVNSDLIQNFKSNPVHKAISICCDLRPAVDISCAAPSTVKEVSL 559          
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: W7TPK9_9STRA (Acetohydroxy-acid reductoisomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPK9_9STRA)

HSP 1 Score: 765 bits (1975), Expect = 6.930e-272
Identity = 374/492 (76.02%), Postives = 429/492 (87.20%), Query Frame = 2
Query:  176 FDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPST 1651
            FD+K+F KT I L GT+EEIVKGGRDLFPLL  AF+GIK+IG+IGWGSQAPAQ QN+++S+  AG  + V +GLR+ S S++LA  VGF+E+ GTLG+M+ VI +SD+VI+LISDA   K +K+IF  +KPGATLGLSHGFLLG+L+SIG  FP+ INV+AVCPKGMGPSVRRLYEQGKTVNG+GIN+SFAVH+D +G+ATE+ALGW +A+GSPF F TT+T+EYKSDIYGERGILLGAVH I+E+L RRY  EGMT E+AFK+S ESITGPITK IS +GVLKLYN LSA D++ F  AYSA+Y PAREILQE YDEVASGNEIRSVVMH +RL EFP+GKIDGT+TWQVGE VRAAR ED+IPLNPFTAGVYVA MMAQIDVLRKAGHS++EIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYIL+QLAYTAVDN  P+N  LI DFL NPVHDAI VC  LRP VDISCAAPST
Sbjct:   69 FDSKVFKKTPISLGGTQEEIVKGGRDLFPLLPQAFEGIKQIGIIGWGSQAPAQGQNLKESL--AGTGVKVKVGLRKSSPSWQLAESVGFTEKDGTLGEMFDVIKESDMVILLISDAAQVKLHKEIFAALKPGATLGLSHGFLLGYLQSIGSDFPEGINVIAVCPKGMGPSVRRLYEQGKTVNGAGINSSFAVHKDANGKATELALGWGVAIGSPFLFKTTMTEEYKSDIYGERGILLGAVHGIIETLFRRYVAEGMTPEQAFKESAESITGPITKIISKEGVLKLYNSLSAADKEVFNKAYSATYKPAREILQEIYDEVASGNEIRSVVMHSERLSEFPVGKIDGTYTWQVGETVRAARKEDEIPLNPFTAGVYVATMMAQIDVLRKAGHSFSEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILDQLAYTAVDNSVPVNQELIGDFLKNPVHDAISVCCSLRPPVDISCAAPST 558          
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: A0A7S4MXJ6_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXJ6_9STRA)

HSP 1 Score: 727 bits (1876), Expect = 4.340e-258
Identity = 352/500 (70.40%), Postives = 420/500 (84.00%), Query Frame = 2
Query:  173 TFDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN 1672
            +F + +F    ++LA T E IVKGGRDLFPLL  AF+G+ +IGVIGWGSQAPAQAQN+RDS++ +G +  VTIGLR  SASY+ A+  GFSE+ GTLG+M+ VI  SDLV++LISDA  AK YK++F  +KPGATLGLSHGFLLG+LESIGE FP++++V+AVCPKGMGPSVRRLYEQGK VNG+GIN+SFAVHQD  G+AT++ALGW +ALGSPF F TTLT EYKSDIYGERGILLGAVH IVESL RRY R+GM+ E+AF +SCESITG I KTIS  G+  +Y++LS  D++ F  +YSASY+PA+EILQE YDEVASGNEIR+V+MHGDRL +FP+GKIDGT TW+VGEKVRA+RDED IPLNPFTAGVYVA MMAQIDVL +AGH Y+E+VNESVIEAVDSLCPYMHY+G+AFMVDNCS TA+ GSRKWAPRFDYILEQLAYTAVDN   ++  LI DF  + VH+A+  C ELRP VDISC A ++ KEIV+ 
Sbjct:   40 SFTSDVFSPQDVQLADTTETIVKGGRDLFPLLPKAFEGVSKIGVIGWGSQAPAQAQNLRDSLDESGTEATVTIGLRPTSASYQQAKDAGFSEDEGTLGEMFDVIKQSDLVVLLISDAAQAKLYKEVFAAMKPGATLGLSHGFLLGYLESIGEAFPEDMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINSSFAVHQDKSGKATDLALGWGVALGSPFMFETTLTSEYKSDIYGERGILLGAVHGIVESLSRRYQRQGMSPEQAFTESCESITGNIVKTISTQGIKAVYDNLSDDDKKVFETSYSASYMPAKEILQEIYDEVASGNEIRTVIMHGDRLDKFPVGKIDGTETWKVGEKVRASRDEDNIPLNPFTAGVYVATMMAQIDVLLEAGHPYSEVVNESVIEAVDSLCPYMHYRGIAFMVDNCSFTAKTGSRKWAPRFDYILEQLAYTAVDNGKEVDADLIADFQNHKVHEAVTACCELRPAVDISCTAETSTKEIVIE 539          
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: A0A7S1BQ79_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQ79_9STRA)

HSP 1 Score: 726 bits (1875), Expect = 3.760e-257
Identity = 356/501 (71.06%), Postives = 420/501 (83.83%), Query Frame = 2
Query:  176 FDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAAR--DEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN 1672
            F + IF    ++LAGT E IVKGGRDLFPLL  AF+GIK+IGVIGWGSQAPAQAQN++DS+   G DI V+IGLREGS+S   A++ GFS+E GTLG+M+ +I  SDLV++LISDA  AK YKK+FD +KPGATLGLSHGFLLG+L+SIGE FPD+++V+AVCPKGMGPSVRRLYEQGK VNG+GINASF +HQ+V G+A E+ALGW++ALGSP+ F TTL DEY+SDIYGERGILLGAVH IVE+L RRY REGMT E+AF +S ESITG ITK IS  G+  LY+DLS  D+  FR AYSASY P +EILQE YDEV SGNEIR+V+MHG+R++++P+GKIDGT TW VGEKVRA+R  DE  IPLNPFTAGVYVA MMAQIDVLR+AGH Y+EI+NESVIEAVDSLCPYMHY+G+AFMVDNCS TA+ GSRKWAPRFDYIL+QLAYTAVDN  P++  +I DF  NPVH AI  C +LRP VDISC AP+T KEIV+ 
Sbjct:   89 FTSDIFTTREVELAGTAETIVKGGRDLFPLLPKAFEGIKKIGVIGWGSQAPAQAQNLKDSLADCGSDITVSIGLREGSSSMAEAQEQGFSKEDGTLGEMFDIIGQSDLVVLLISDAAQAKLYKKVFDAMKPGATLGLSHGFLLGYLDSIGESFPDDMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINASFGIHQNVSGKANEVALGWAVALGSPYMFETTLRDEYRSDIYGERGILLGAVHGIVETLYRRYIREGMTPEQAFLESSESITGKITKVISKRGIKALYDDLSEEDKATFRSAYSASYKPNKEILQEIYDEVRSGNEIRTVIMHGERIEKYPVGKIDGTETWIVGEKVRASREPDESNIPLNPFTAGVYVACMMAQIDVLREAGHCYSEIINESVIEAVDSLCPYMHYRGIAFMVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGKPVDMDIISDFENNPVHGAIVECCKLRPTVDISCEAPTTTKEIVIQ 589          
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: A0A7S4V3E5_9STRA (Acetohydroxy-acid reductoisomerase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V3E5_9STRA)

HSP 1 Score: 725 bits (1872), Expect = 4.050e-257
Identity = 371/551 (67.33%), Postives = 447/551 (81.13%), Query Frame = 2
Query:   23 TMKSALVSSLLFAGAAAFVPSNAPAKSGSFTRSSRQLAAARSNRMSMSAHTFDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQ-EFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN 1672
            TMK + V++LL A A+AF PS+      +F   +   A A+S+ +SM+   F++ IF    +  A T+E IVKGGRDLFPLL  AF+GI++IGVIGWGSQAPAQAQN+RDS    GMDI VTIGLR GS+S+E A+  GFSEE GTLG+M+ VI +SDLV++LISDA  A  YK++F  +KPGATLGLSHGFLLG+L+SIGE FP++++V+AVCPKGMGPSVRRLYEQGK VNG+GINASF VHQ+V G+A+E+ALGW +ALGSPF F TTL  EYKSDIYGERGILLGAVH IVESL RRY R+GMTAE+AF +SCESITG I KTIS  G+  +Y++L+  D+  F+ AYSASY+PA+EILQE YDEVASGNEIR+V+MHG R   +FP+GKIDGT TW+VGEKVRA RDED IPLNPFTAGVY+A MMAQ DVL +AGH Y+E+VNESVIEAVDSLCPYMHY+GVAFMVDNCS TA+ GSRKWAPRFDYILEQLAYTAVDN   +N+ LI+ F  + VHDA+  C +LRP+VDISC A ++ KEIV+ 
Sbjct:   22 TMKFS-VAALLIASASAFAPSS------TFMPRTAAPAIAKSSALSMA---FESTIFKTEEVTFADTKETIVKGGRDLFPLLPKAFEGIEKIGVIGWGSQAPAQAQNLRDSFTEVGMDIKVTIGLRSGSSSFEEAKGCGFSEEDGTLGEMFDVIKESDLVMLLISDAAQAALYKEVFAAMKPGATLGLSHGFLLGYLDSIGEGFPEDMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINASFGVHQNVSGKASELALGWGVALGSPFMFETTLRSEYKSDIYGERGILLGAVHGIVESLYRRYQRQGMTAEQAFTESCESITGNIVKTISTQGIKAVYDELNDDDKAIFQQAYSASYMPAKEILQEIYDEVASGNEIRTVIMHGKRAAGDFPVGKIDGTDTWKVGEKVRANRDEDNIPLNPFTAGVYIATMMAQCDVLLEAGHPYSEVVNESVIEAVDSLCPYMHYRGVAFMVDNCSFTAKTGSRKWAPRFDYILEQLAYTAVDNGKAVNEDLIKAFEEHKVHDAVTECCKLRPSVDISCNAETSTKEIVIE 562          
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: B7GDA6_PHATC (Acetohydroxy-acid reductoisomerase n=2 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GDA6_PHATC)

HSP 1 Score: 721 bits (1861), Expect = 8.240e-256
Identity = 354/499 (70.94%), Postives = 418/499 (83.77%), Query Frame = 2
Query:  176 FDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN 1672
            F++KIF    +  A T+E IVKGGRDLFPLL  AF+GI++IGVIGWGSQAPAQAQN++DS++  G DI V+IGLREGS+S+E A+  GFSEE GTLG+M+ VI +SDLV++LISDA  AK YK+IF  +KPGATLGLSHGFLLGHL+SIGEKFP+N++V+AVCPKGMGPSVRRLYEQGK VNG+GIN+SFAVHQDV G+ATE+ALGW IALGSPF F T+L  EY SDIYGERGILLGAVH IVESL RRY R+GM+ E+AF +S ESITG I K IS  G+  +Y  L   D++ F+ AYSASY PA+EILQE YDEV+SGNEIR+V+MHG R+ ++P+GKIDGT TW+VGEKVRA RDEDKIPLNPFTAGVYVA MMAQIDVL + GH Y+E+VNESVIEAVDSLCPYMHY+GVAFMVDNCS TA+ GSRKWAPRFDYIL+QLAYTAVDN AP+N+ LI DF  + VH A+  C +LRP VDIS  A ++ KEIV+ 
Sbjct:   41 FESKIFETQEVTFADTKEIIVKGGRDLFPLLPKAFEGIEKIGVIGWGSQAPAQAQNLKDSLKEVGADITVSIGLREGSSSFEEAKDCGFSEEDGTLGEMFSVIKESDLVVLLISDAAQAKLYKEIFAAMKPGATLGLSHGFLLGHLDSIGEKFPENMDVIAVCPKGMGPSVRRLYEQGKDVNGAGINSSFAVHQDVSGKATELALGWGIALGSPFMFETSLRSEYCSDIYGERGILLGAVHGIVESLYRRYQRQGMSPEQAFLESSESITGNIVKIISTKGIKAVYESLDGDDKETFQKAYSASYKPAKEILQEIYDEVSSGNEIRTVIMHGARIDKYPVGKIDGTDTWKVGEKVRAERDEDKIPLNPFTAGVYVATMMAQIDVLLEEGHPYSEVVNESVIEAVDSLCPYMHYRGVAFMVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGAPVNEQLIADFEKHSVHQAVEECCKLRPAVDISLFAETSTKEIVIQ 539          
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: B8C486_THAPS (Acetohydroxy-acid reductoisomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C486_THAPS)

HSP 1 Score: 721 bits (1860), Expect = 1.050e-255
Identity = 353/501 (70.46%), Postives = 418/501 (83.43%), Query Frame = 2
Query:  170 HTFDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN 1672
            + F +++F    +K A T E IV+GGRDLFPLL  AF+G+K IGVIGWGSQAPAQAQN+RDS+  AG DI V IGLREGS+S+E AR+VGFSE+A TLG+M+ VI  SDLV++LISDA  A  YK++F  +KPGATLGLSHGFLLG+LESIGEKFP+N++V+AVCPKGMGPSVRRLYEQGK VNG+GINASFAVHQD  G+A+E+ALGW +ALGSPF F TTL+ EY+SDIYGERGILLGAVH IVESL RRY R+GM+ E+AF +SCESITG ITK IS  G+  +Y+ L   D++ F+ AYSASY+PA+EILQE YDEV+SGNEIR+V+MHG R+ +FP+GKIDGT TW VGEKVRA RDEDK PLNPFTAGVYVA MMAQIDVL +AGH Y+E+VNESVIEAVDSL PYMHY+GVAFMVDNCS TA+ GSRKWAPRFDYIL+QLAYTAVDN  P+N  LI+DF  + VH A+  C +LRP VDIS  + S+ KEIV+ 
Sbjct:   36 NAFTSEVFKTEDVKFADTTETIVRGGRDLFPLLPKAFEGVKEIGVIGWGSQAPAQAQNLRDSLNEAGCDIKVRIGLREGSSSFEEAREVGFSEDADTLGEMFDVIKKSDLVMLLISDAAQAALYKEVFAAMKPGATLGLSHGFLLGYLESIGEKFPENMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINASFAVHQDKSGKASELALGWGVALGSPFMFETTLSSEYRSDIYGERGILLGAVHGIVESLYRRYQRQGMSPEQAFTESCESITGKITKIISTKGIKAVYDGLEGEDKEIFKQAYSASYMPAKEILQEIYDEVSSGNEIRTVIMHGKRINKFPVGKIDGTDTWVVGEKVRATRDEDKTPLNPFTAGVYVATMMAQIDVLLEAGHPYSEVVNESVIEAVDSLAPYMHYRGVAFMVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGKPVNADLIKDFETHKVHAAVEECCKLRPAVDISVDSASSTKEIVIE 536          
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Match: A0A1E7FX95_9STRA (Acetohydroxy-acid reductoisomerase n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FX95_9STRA)

HSP 1 Score: 720 bits (1858), Expect = 2.440e-255
Identity = 367/547 (67.09%), Postives = 437/547 (79.89%), Query Frame = 2
Query:   32 SALVSSLLFAGAAAFVPSNAPAKSGSFTRSSRQLAAARSNRMSMSAHTFDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIAYSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN 1672
            +A  ++L  A A+AF P NA      F   +  ++   S+ M M+   F++KIF  T +  A T E IVKGGRDLFPLL  AF+GIK++GVIGWGSQAPAQAQN+ DS+  AG DI V+IGLREGS+S+E A+ VGFSEE GTLG+MY +I  SDLV++LISDA  AK YK+IF  +KPGATLGLSHGFLLG+LESIGE FP +++V+AVCPKGMGPSVRRLYEQGK VNG+GIN+SFAVHQDV G+AT++ALGW +A+GSPF F T+L  EY SDIYGERGILLGAVH IVESL RRY R+GM+ EEAF QS ESITG I K IS  G+  +Y  L   D++ F  AYSASY PA+EILQE YDEV+SGNEIR+V+MHGDR+ ++P+GKIDGT TW +GEKVRA RDEDKIPLNPFTAGVYVA MMAQIDVL + GH Y+E+VNESVIEAVDSLCPYMHYKGVAFMVDNCS TA+ GSRKWAPRFDYIL+QLAYTAVDN A +N+ LI DF ++ VH A+  C +LRP+VDIS  A ++ KEIV+ 
Sbjct:    4 TAAATALFLASASAFSPHNA------FVNKN-MVSTPTSSAMQMA---FESKIFETTEVNFADTTETIVKGGRDLFPLLPKAFEGIKQVGVIGWGSQAPAQAQNMMDSLAVAGADIKVSIGLREGSSSFEEAKAVGFSEEDGTLGEMYDIIGKSDLVMLLISDAAQAKLYKEIFAAMKPGATLGLSHGFLLGYLESIGESFPADMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINSSFAVHQDVSGKATDLALGWGVAVGSPFMFETSLRSEYCSDIYGERGILLGAVHGIVESLYRRYQRQGMSKEEAFLQSSESITGNIVKIISTQGIKAVYEGLEGEDKKIFETAYSASYKPAKEILQEIYDEVSSGNEIRTVIMHGDRIDKYPVGKIDGTDTWILGEKVRAERDEDKIPLNPFTAGVYVATMMAQIDVLLEEGHPYSEVVNESVIEAVDSLCPYMHYKGVAFMVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGAAVNEDLIADFESHKVHQAVEECCKLRPSVDISLFAETSTKEIVIE 540          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|49056 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8S5_9STRA0.000e+0100.00Acetohydroxy-acid reductoisomerase n=1 Tax=Tribone... [more]
D7FQZ4_ECTSI9.760e-28371.48Acetohydroxy-acid reductoisomerase n=2 Tax=Ectocar... [more]
A0A7S2W6X2_9STRA1.050e-28073.63Acetohydroxy-acid reductoisomerase n=1 Tax=Rhizoch... [more]
W7TPK9_9STRA6.930e-27276.02Acetohydroxy-acid reductoisomerase n=2 Tax=Monodop... [more]
A0A7S4MXJ6_9STRA4.340e-25870.40Acetohydroxy-acid reductoisomerase n=1 Tax=Odontel... [more]
A0A7S1BQ79_9STRA3.760e-25771.06Acetohydroxy-acid reductoisomerase n=1 Tax=Corethr... [more]
A0A7S4V3E5_9STRA4.050e-25767.33Acetohydroxy-acid reductoisomerase n=2 Tax=Ditylum... [more]
B7GDA6_PHATC8.240e-25670.94Acetohydroxy-acid reductoisomerase n=2 Tax=Phaeoda... [more]
B8C486_THAPS1.050e-25570.46Acetohydroxy-acid reductoisomerase n=1 Tax=Thalass... [more]
A0A1E7FX95_9STRA2.440e-25567.09Acetohydroxy-acid reductoisomerase n=3 Tax=Bacilla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:455213..462596 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|49056|CE49055_599
BiGG ReactioniRC1080.CRv4_Au5_s10_g343_t1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00726,RC00836,RC00837,RC01726
KEGG ReactionR03051,R04439,R04440,R05068,R05069,R05071
KEGG ModuleM00019,M00570
KEGG Pathwayko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG koko:K00053
EC1.1.1.86
GOsGO:0000166,GO:0000287,GO:0003674,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008150,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0010035,GO:0010038,GO:0030312,GO:0031967,GO:0031975,GO:0036094,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0046872,GO:0046914,GO:0046983,GO:0048037,GO:0048046,GO:0050661,GO:0050662,GO:0050896,GO:0070402,GO:0071944,GO:0097159,GO:1901265,GO:1901363
Descriptionketol-acid reductoisomerase activity
COG categoryEH
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0059@1|root,2QQBF@2759|Eukaryota
Evalue3.74e-284
Seed ortholog2880.D7FQZ4
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionKetol-acid reductoisomerase
Ec32 orthologEc-09_003170.1
TranscriptId49378
TrackFilteredModels1
ProteinId49056
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|49056gene_6656Tribonema minus UTEX_B_3156 geneContig_25 455213..462596 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|49056Trimin1|49056|CE49055_599Tribonema minus UTEX_B_3156 polypeptideContig_25 455238..462478 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6656_1exon_6656_1Tribonema minus UTEX_B_3156 exonContig_25 455213..455377 +
exon_6656_2exon_6656_2Tribonema minus UTEX_B_3156 exonContig_25 455735..456002 +
exon_6656_3exon_6656_3Tribonema minus UTEX_B_3156 exonContig_25 456564..456698 +
exon_6656_4exon_6656_4Tribonema minus UTEX_B_3156 exonContig_25 458636..458824 +
exon_6656_5exon_6656_5Tribonema minus UTEX_B_3156 exonContig_25 460027..460206 +
exon_6656_6exon_6656_6Tribonema minus UTEX_B_3156 exonContig_25 460927..461141 +
exon_6656_7exon_6656_7Tribonema minus UTEX_B_3156 exonContig_25 461666..461802 +
exon_6656_8exon_6656_8Tribonema minus UTEX_B_3156 exonContig_25 462093..462596 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_6656UTR5_6656Tribonema minus UTEX_B_3156 five_prime_UTRContig_25 455213..455237 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6656CDS_6656Tribonema minus UTEX_B_3156 CDSContig_25 455238..455377 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6656UTR3_6656Tribonema minus UTEX_B_3156 three_prime_UTRContig_25 462479..462596 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6656 ID=mRNA_6656|Name=jgi.p|Trimin1|49056|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1793bp|location=Sequence derived from alignment at Contig_25:455213..462596+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGCTTGTTTGTTTGCACTCTGCACGATGAAGTCTGCGCTGGTGTCGTCCC
TGCTCTTTGCCGGCGCGGCGGCCTTCGTGCCGAGCAATGCGCCCGCAAAG
AGTGGCAGCTTCACCCGCAGCTCCAGGCAGCTGGCGGCGGCGCGCTCCAA
CAGGATGTCCATGAGCGCCCACACCTTTGACACCAAGATCTTCCCCAAGA
CCGGCATCAAGCTTGCCGGCACCGAGGAGGAGATCGTCAAGGGCGGGCGG
GATCTGTTCCCCCTGCTGAAGGATGCCTTCAAGGGCATCAAGCGCATCGG
TGTCATCGGCTGGGGATCTCAGGCCCCCGCGCAGGCACAGAACATCAGGG
ACTCCATAGAGGCGGCGGGCATGGACATTCCCGTGACCATTGGCCTGAGG
GAGGGGTCTGCCTCTTACGAGCTGGCGCGCCAGGTGGGCTTCTCTGAGGA
GGCGGGCACGCTCGGCGACATGTACAAGGTCATTGCGGACAGCGACTTGG
TGATTGTGCTCATCTCGGACGCAGGCCTGGCCAAGGGGTACAAGAAGATC
TTCGACACCATCAAGCCGGGCGCCACCCTCGGCCTCTCGCACGGCTTCCT
CCTGGGCCACCTGGAGTCGATCGGCGAGAAGTTCCCCGACAACATCAACG
TGGTGGCCGTGTGCCCCAAGGGCATGGGCCCGTCCGTGCGCCGCCTCTAC
GAGCAGGGCAAGACGGTCAACGGCTCCGGCATCAACGCGTCCTTCGCGGT
GCACCAGGACGTGGACGGGCGCGCGACGGAGATCGCGCTGGGCTGGAGCA
TCGCGCTGGGCTCCCCGTTCTCATTCCTGACCACGCTCACGGACGAGTAC
AAGAGCGACATCTACGGCGAGCGCGGCATCCTGCTGGGCGCCGTGCACGC
CATCGTGGAGTCGCTCATGCGGCGGTACACGCGCGAGGGCATGACCGCCG
AGGAGGCCTTCAAGCAGTCCTGCGAGTCCATCACGGGCCCCATCACCAAG
ACCATCTCCCACGACGGCGTGCTCAAGCTGTACAACGACCTGTCGGCGCC
GGACCAGCAGCAGTTCCGCATCGCGTACAGCGCGTCGTACCTGCCCGCCC
GCGAGATCCTGCAGGAGTGCTACGACGAGGTCGCCTCCGGCAATGAGATC
AGGTCCGTGGTCATGCACGGCGACCGCCTGCAGGAGTTCCCCATTGGCAA
GATCGACGGCACGCACACATGGCAGGTGGGGGAGAAGGTGCGCGCGGCGC
GGGACGAGGACAAAATCCCCCTCAACCCCTTCACAGCGGGCGTGTACGTG
GCCGTCATGATGGCGCAGATCGACGTGCTGCGCAAGGCGGGGCACTCGTA
CACGGAGATCGTGAACGAGTCCGTCATCGAGGCGGTCGACTCGCTGTGCC
CGTACATGCACTACAAGGGCGTCGCGTTCATGGTGGACAACTGCTCCATC
ACGGCGCGCCTCGGCTCGCGCAAGTGGGCGCCGCGCTTCGACTACATCCT
GGAGCAGCTGGCGTACACGGCGGTCGACAACGACGCGCCGATCAACGACG
CACTCATCGAGGACTTCCTGGCGAACCCCGTGCACGACGCAATCCGCGTG
TGCGGCGAGCTCAGGCCGAACGTGGACATCTCGTGCGCGGCGCCGTCGAC
CGTCAAGGAGATTGTGCTCAACTAGACGCCGCCGCTGCCACTGGCTGCGT
TGCGTCGCGCAACTTCCGCTTTACTCTAGGGGGATGCTGCACAGTCTATG
GCGCTCACCTTCGCCAGCCGGAATGGAGAGGGGCAGCTGTGGG
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protein sequence of jgi.p|Trimin1|49056

>Trimin1|49056|CE49055_599 ID=Trimin1|49056|CE49055_599|Name=jgi.p|Trimin1|49056|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=550bp
MKSALVSSLLFAGAAAFVPSNAPAKSGSFTRSSRQLAAARSNRMSMSAHT
FDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQA
PAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMY
KVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIG
EKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRA
TEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRR
YTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIA
YSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQ
VGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESV
IEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAV
DNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVLN*
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mRNA from alignment at Contig_25:455213..462596+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6656 ID=mRNA_6656|Name=jgi.p|Trimin1|49056|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7384bp|location=Sequence derived from alignment at Contig_25:455213..462596+ (Tribonema minus UTEX_B_3156 )
TGCTTGTTTGTTTGCACTCTGCACGATGAAGTCTGCGCTGGTGTCGTCCC TGCTCTTTGCCGGCGCGGCGGCCTTCGTGCCGAGCAATGCGCCCGCAAAG AGTGGCAGCTTCACCCGCAGCTCCAGGCAGCTGGCGGCGGCGCGCTCCAA CAGGATGTCCATGAGGTGAGGATGCGGCGCCGAAATGCACAAGGCTGCCA CGGACGGCTCAATGCAGGACTGCAGGTGCATAGAGCAGCTCGGGGTTCTT CAGATTCCGGCAACTGGAGGCAGCCGCCCTGTTCAGTTCCAAACTCGTGC TTCTGCATGAGTGCAAGCCAACTGCGGCAACACACAGAGAGCCGGCTGCC ATGGCGCTGCTGGTGCTATCCAAGCAACCGAGAGCAACAAACTAGGATAC ACCTCAATTGGCGATGTCAGCTGTCGCCGATCCAGCTCACGCTCACGTCT TGATTCACGGTAAACCAACAAGTATCATGCTCTCTGACAGCTGCCACCCC ATGTGTGCGCCAATACACGCAGCGCCCACACCTTTGACACCAAGATCTTC CCCAAGACCGGCATCAAGCTTGCCGGCACCGAGGAGGAGATCGTCAAGGG CGGGCGGGATCTGTTCCCCCTGCTGAAGGATGCCTTCAAGGGCATCAAGC GCATCGGTGTCATCGGCTGGGGATCTCAGGCCCCCGCGCAGGCACAGAAC ATCAGGGACTCCATAGAGGCGGCGGGCATGGACATTCCCGTGACCATTGG CCTGAGGGAGGGGTCTGCCTCTTACGAGCTGGCGCGCCAGGTGCGCTGGC GTACGTGGCAGAGCATGTTGCGCAGACGGAGGTGCAAGGGCTAAGCTGCA GTTGATCTTGAAGTTGGCAACATTGGCACTGTGGGTTCATTATGAGTAAA TCTTGCATGTTATTCCAAGCGCTCAGAGCACAGAAAAGTGTTAGAAGCAG CGCACTGGATTCGAAGTGTCCCAGTAGCTTGTGTGGAGGACATTTCCCCT GCTGACGAGGAGCACTTAACTCTCACTGTTTTCAAGCGCTGAGATAGGCA TGCATGGCAGTGACTGCACCGAAGCGCTGTCACGAAGGCGCTCATCGCGC ACGCCTCTCACAGAACATATACACCCGACAGCCTGTAGTGTCGGGCTCCG CAACCGCCTATCACATACACCGAGCTCATCCTCTGTTGCACTTATGCCAA GCAGGCACATGTCAGTCTCACCCAGACCCCCATTGTGCCGCGCTACTATG TGAGGCGATGCACTTCTTGAATCCGCAGCTGACTGGAGCAATAAGCTAGA ACATGCGTTGGTGTATATCCATGCGTGCTTGCTTGCCACGCACGGGCGCA GGTGGGCTTCTCTGAGGAGGCGGGCACGCTCGGCGACATGTACAAGGTCA TTGCGGACAGCGACTTGGTGATTGTGCTCATCTCGGACGCAGGCCTGGCC AAGGGGTACAAGAAGATCTTCGACACCATCAAGCCGGTGAGAGCCTGACG GACGTGCATCTCGTAATTCGGTGTGGAACATGCGTCGGTTTAGCCCAATG TTGTTGAAGTTGAAGTTGTCAGCGCGTCTCCCGCAAAGCGCAAGGCAACG TCGGCAGACGCGTCAGCGCGTCGGCTGCCGCTGTCTGTCTTGCCGCCTGA AACTGTGTTATGTCATAAACTTGAGCTTTTAGCGCTGAGCGTTGTGACGT CGTGAGGTCGCTGTCAGTACTTGCCGAGCAGAGCCGGGCGGCGCGCCAGC GTGCAATTACAGGCCAGGAAAACTTCTGCGACTGCGCGTGGGTCTGGCCG CACCTCCAGGTTTTCGGGGTCTTGGGGGTAGGTTCGCGAGCAGCCGCAGC ATCGCACGCAGGGCGGCGAGCAAGTAATGCGTTGGAGCGACGCAGGAACG CCATCCGCGTAAACGTCGAATTTGTAGCCACAAGCGCCGAGCACACGAAG CGCTGCCGCTGCGCGTACAAGCGAAAGGCGCGTGCGCAAGTGTGCGTTGC ACAAGACGCGCAGGCCCTCTGCTGCTGATGGCAGACGGACGCGGACCTGT CTGCAAGGCACACTCGCAGAATAATTGATGCACATTCGGTGCGGTTGACA GATGCAGATGTTGCTGCACACGCATCGCGTCTGAGCCAGAGCCAGAGCAT CCTTAACAGTGCGCTGTGTAGTGTGTAGCACTTTCCTGATGCGTCAAAGG TGCCCATCAAAACGTGTCAGTGGCTCCAGAGCTGTTGACCTTCTGTTGGC TTCAGTGACCCTGTCGTAGTACTTGGTGTGCTGTAGTTCTGACCAGAATG GCATTGATACGCTGGGAGCAGAAGTGCCTTAGTGGGTGCGTGAAATAGGT TCATCAAAATATAAATTTAATGTATGGGTGTCGTCAAGTGCATGGCTGCA TCTGCAAAAGCATGGTCGGAAAGCTTCTTGGAGTTGTAATAAAGCGTATG TACATCTCATTTATTAAGTGCATGGCTGAATCTGCACCAGCACCTTCCGA AGTTTTTTTGAGCACTGACATTAAAGTACATCATGCCTTGTACGCAAGCC GGCACTTCAACGTACTTCAATTCAGGCTGGTACATTATTGAGGTTACAGT TACTGCACAAAACAAGAGGTTGAGACAGTTTGCGGCACGCTCCGGTTTGT GGATGGTCTGGAGGAGGCATCGTAGTTGCATGCAGAAGACGATCACTTCA GCGTCGCAAGAAGATTAGACATCGGTAATTTCCAGCGCCACTGCCGCCCT GACACGCTCCTATGGCAAGCCTTTACCTCACGGTAGTCACTCACTTCCCT CAGCGTTGAGCAATGACTGATTGGCCCTGCAGAGCATGAAACGCCATGGC AGGTTCTGACCATCTCAATTCTGTGACGGCAGTGATCGGTGGCTGGCAAG GAGCTCCCTGTGCGCGCCAACGTTTCTTGGATTTGTCTGCGTCTGCGCAG GCATGCTAGTCGATACTTGAAGTATTCTATGCAAAGTGCCCTCGAAGATG GTTGCGTCCGCGCCAGTTTCTCTGCCGGATCCCATGGCAGGGCGCCCCGC ACTTTCAAACCGAGATTTCACCTGTGACCCCCTCGTGGCGGTTCAGTGCC TCGTGTCAGCTGCGCTCGCAGCCCTCACATGTGCTACATATATCGCTCCC TTGAGCATGCAGCGATGACGCAGTGCTGATGCCGGTGACACTCCGCTGAA ACTTCAAGCGGCGACGCTCCAGAGCGCCACCCCTCACACATTCAACCGCT CATTTGAATATTTGGTGACGCTGTGCTGACGCCGGTGACGCTCCGCTGAA ACGTCACGCGGCGACGCTCCAGAGCGCCACCCTCACACATCCAACCGCTC ACTTGAAGCTTTGATGACGCTGTGCTGACGCTGGTGACGCTCCGCTGAAA CTTCACGCGGCGACGCCCCTCAGGGCGCCACCCTCGGCCTCTCGCACGGC TTCCTCCTGGGCCACCTGGAGTCGATCGGCGAGAAGTTCCCCGACAACAT CAACGTGGTGGCCGTGTGCCCCAAGGGCATGGGCCCGTCCGTGCGCCGCC TCTACGAGCAGGGCAAGACGGTCAACGGCTCCGGCATCAACGCGTCCTTC GCGGTGCACCAGGTATGCACGCGCATGTCGCATGATGCGTATGTATGTAC ACGTGTGTAGCTGAGCACTGCTGTTTGGCGCGCCCCCCTGCAGGCCGGCG ACGGGCGCGTGACGGAGATTGCGCTGGGCTGGAGTGACCCTCTGTTGACT TGGCCTATTGCCTTAGCCTACGCGCGCGCAGCTAGACCGCGCGCCAATCT TTTCTAGATTCTAAATTTCAACGAAACGAGTCAGAAGAGCGTAGCGCTCC AGGTGACGAGGTGTGGTTAGCCGTCAAATTGAATGCCTTCCACCAATAAC CGTGGACTCCCCAGCTTTGCACGCGACGCGGCGGCGCGATGCGGTGGGCC GCATGTCCAGCGGCCACACCGCGGATGACTGAGGAGCTAAACCGCGCGCC AATCTTTTCTAGATTCTAAATTTCAACGAAACAAATCAGAAGAGCGTAGC GCTCCAGGTGACGAGGTGTGGTTAGCCGTCAAATTGAATGCCTTCCACCA ATAACCGTGGACTCCCCAGCTTTGCACGCGACGCGGCGGCGCGATGCGGT GGGCCGCATGTCCAGCGGCCGCACCGCGGATGACTTGAGGTCCTGTTCTT TGCGCCGTCTCACAGCGGCATCATTGTATGCTCGTGCGAGCACTGCCTGC ATTTGATTGTCGTCGAGCTCCGTGGAGAACGTGAACCTTGCGAGTGCTAC CCCCCCCCGCTGCCGAGCACACAGCAAGCCGCCATACTGTAGCTGTGGTA CGCTTGACGAGCGGCGCGCGGATCGTGCACAAGCGATTCGCGGAGCCTGC GTGTCGGAGGAGGAACGCAGGGCAGCGCTGTCAAATAGATAGAGCGCCGT TGCAGCCGTCGGCGGCGCGCCTTCAGCGGTCTGCCGCTCCCATGCTGCGT CAGTATGCTGCTGCTGCCGTCCCTGGAGTCAGACAGCAGCGCGCGTCAGC ACGGTGCGCTGCATGCTGCGTCGGGGGGGCGTATGTGTGTTTCTATGCTG TGTGCCCTCTTGTGTATGTGTGTATACGTGAGTCACTGAGCGTTGCTGTC TGGCGCGCCCGCAGGACGTCAATGGGCGCGCGACGGAGATCGCGCTCGGC TGGAGCATCACGCATATTTGTTGCTCTCATGTGTATATGTATTTATATAC TTGTATTCATACATATGTATGCATGTATACATGCGTAGCTGAGCACTGCT GTATGCACCCGCAGGACGTGGACGGGCGCGCGACGGAGATCGCGCTGGGC TGGAGCATCGCGCTGGGCTCCCCGTTCTCATTCCTGACCACGCTCACGGA CGAGTACAAGAGCGACATCTACGGCGAGCGCGGCATCCTGCTGGGCGCCG TGCACGCCATCGTGGAGTCGCTCATGCGGCGGTACACGCGCGAGGTGAGT TTGAGCACAACTTCAATTTCAACTTCAAGCGTACATAAGCTGTGTGGTGT TGCGTTTCGTGTGTTCTTCCTGTGAGCCCATGGTTGTAATTATTATGGAG TCGCTCATGCGGCGGTACACGCGCGAGGTCAGTTTGGGGTGTCAACTTCA GTTTCAACTTAAAGTATAGTGTTCTTAGTTTCAACGAGCCTGTATGTAGC TGTAGCGACTGTGGAGTAGCTCGTGTTGCGCAACATGTGCAAGGTGAGTT TGTCTTGAGCACAACTTCAAGTGTGCAGTAGTGCATTTGATGTGTTGTTT GTGCGAGCCCGTAGCCGGAGCGATCTTGGATTCGCTTATGCGGTGGTACA CGCATGTGGTGAGCTTTCTGGGGTGTAAACGCAACTTCAAGTTAACTTCA GAGTGAGGAAGGTGTGTGAAACACAGGAGCAGAGCGATGATTTGCAGCAG CACCAGCACCAGCAGCACGTCAGCGGTGTGCACTCATGAGGCGCGTTTTC ACATTGTCTCACACCACCGCGGATATGCGCTCGTCTGCACTTTCAAGTCC TACCATGGCCAGCATTCCTATGACACACACCCTGCCCTCAGCCTAGCCCC CCCCCCCCCCCCCCAGTCCTCTGAGCCCTCAATTAAGCCTGCCCCCCCCC CCCCCCCCAGTCCTCTGAGCCCTCAACTAAGCCCCCCCCCCCCCCTCTCC CCCTTGTGCGGCAGGGCATGACCGCCGAGGAGGCCTTCAAGCAGTCCTGC GAGTCCATCACGGGCCCCATCACCAAGACCATCTCCCACGACGGCGTGCT CAAGCTGTACAACGACCTGTCGGCGCCGGACCAGCAGCAGTTCCGCATCG CGTACAGCGCGTCGTACCTGCCCGCCCGCGAGATCCTGCAGGAGTGCTAC GACGAGGTCGCCTCCGGCAATGAGATCAGGTGATTATTCAGCTTTTTTCT GAAGCTGAACTGCAGTGCGTAGCCCTTTTTTGAAGTTATATTCGCGGTGC GTACAGCGCGTCGTACCTGCCCGCGCGAGCGCGAGATCCTGCAGGAATGG TACGACGAGGTCGCCTCCGGCAGCGATATCAGGTGATGATGAGTGCTTTC TTGAAGCCAAAAAAGATTATGTAGTGTCTTTTGCAGTCGCCACCCATTAC ACAATCGGCGATATTACTTAAGGACCACCCCCCCCGCGAGTCCAAGTGAA TTTGGCTGAACGTTGGCGCTGTGAGACGCCATCGTCTTGCGCACTGCGAC ATGCAGCAACGGAGCCGCAGGCCCCTTGCTCGCCAGTCACTGCGCTCAGC AATCAAAAATAGAGCTTGCGAAGCCTCCTGCGCTACGCATACAGCACATT GACGACAGGGGCGCGCATGCCGCCTGTACCGTGACATGACCGTGCGTGTG GTCCTGTATCTAAACCTAATATAACCCTAACCCTAACCACCTGCGCGCCG CAGGTCCGTGGTCATGCACGGCGACCGCCTGCAGGAGTTCCCCATTGGCA AGATCGACGGCACGCACACATGGCAGGTGGGGGAGAAGGTGCGCGCGGCG CGGGACGAGGACAAAATCCCCCTCAACCCCTTCACAGCGGGTACGTGGCT TCTGGCAGCGCTCATTCATCTCGCATGTAGCACTTCCGTCGTACGCGTGT TCCCCACAGAGCTTGAGGCGGCAACAAGGCCTCCGCCAATTCTGTTGCAT GCTTGCACGCTGTGACCGCTATTCACCACACTGTAGTTGTGTAATGAGGG TCTGCTGGCTCGTGTGTGTCATTGAAGTTCAGTGCTGCACTCGGCGTGTT GCTCGCCGCAACTCTCATGCTCTATCATCTTTCCATGCTGCTGGATGCTC ACCCTCCTAATCCCCCCCCCAAAAACACAGGCGTGTACGTGGCCGTCATG ATGGCGCAGATCGACGTGCTGCGCAAGGCGGGGCACTCGTACACGGAGAT CGTGAACGAGTCCGTCATCGAGGCGGTCGACTCGCTGTGCCCGTACATGC ACTACAAGGGCGTCGCGTTCATGGTGGACAACTGCTCCATCACGGCGCGC CTCGGCTCGCGCAAGTGGGCGCCGCGCTTCGACTACATCCTGGAGCAGCT GGCGTACACGGCGGTCGACAACGACGCGCCGATCAACGACGCACTCATCG AGGACTTCCTGGCGAACCCCGTGCACGACGCAATCCGCGTGTGCGGCGAG CTCAGGCCGAACGTGGACATCTCGTGCGCGGCGCCGTCGACCGTCAAGGA GATTGTGCTCAACTAGACGCCGCCGCTGCCACTGGCTGCGTTGCGTCGCG CAACTTCCGCTTTACTCTAGGGGGATGCTGCACAGTCTATGGCGCTCACC TTCGCCAGCCGGAATGGAGAGGGGCAGCTGTGGG
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Coding sequence (CDS) from alignment at Contig_25:455213..462596+

>mRNA_6656 ID=mRNA_6656|Name=jgi.p|Trimin1|49056|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1650bp|location=Sequence derived from alignment at Contig_25:455213..462596+ (Tribonema minus UTEX_B_3156 )
ATGAAGTCTGCGCTGGTGTCGTCCCTGCTCTTTGCCGGCGCGGCGGCCTT
CGTGCCGAGCAATGCGCCCGCAAAGAGTGGCAGCTTCACCCGCAGCTCCA
GGCAGCTGGCGGCGGCGCGCTCCAACAGGATGTCCATGAGCGCCCACACC
TTTGACACCAAGATCTTCCCCAAGACCGGCATCAAGCTTGCCGGCACCGA
GGAGGAGATCGTCAAGGGCGGGCGGGATCTGTTCCCCCTGCTGAAGGATG
CCTTCAAGGGCATCAAGCGCATCGGTGTCATCGGCTGGGGATCTCAGGCC
CCCGCGCAGGCACAGAACATCAGGGACTCCATAGAGGCGGCGGGCATGGA
CATTCCCGTGACCATTGGCCTGAGGGAGGGGTCTGCCTCTTACGAGCTGG
CGCGCCAGGTGGGCTTCTCTGAGGAGGCGGGCACGCTCGGCGACATGTAC
AAGGTCATTGCGGACAGCGACTTGGTGATTGTGCTCATCTCGGACGCAGG
CCTGGCCAAGGGGTACAAGAAGATCTTCGACACCATCAAGCCGGGCGCCA
CCCTCGGCCTCTCGCACGGCTTCCTCCTGGGCCACCTGGAGTCGATCGGC
GAGAAGTTCCCCGACAACATCAACGTGGTGGCCGTGTGCCCCAAGGGCAT
GGGCCCGTCCGTGCGCCGCCTCTACGAGCAGGGCAAGACGGTCAACGGCT
CCGGCATCAACGCGTCCTTCGCGGTGCACCAGGACGTGGACGGGCGCGCG
ACGGAGATCGCGCTGGGCTGGAGCATCGCGCTGGGCTCCCCGTTCTCATT
CCTGACCACGCTCACGGACGAGTACAAGAGCGACATCTACGGCGAGCGCG
GCATCCTGCTGGGCGCCGTGCACGCCATCGTGGAGTCGCTCATGCGGCGG
TACACGCGCGAGGGCATGACCGCCGAGGAGGCCTTCAAGCAGTCCTGCGA
GTCCATCACGGGCCCCATCACCAAGACCATCTCCCACGACGGCGTGCTCA
AGCTGTACAACGACCTGTCGGCGCCGGACCAGCAGCAGTTCCGCATCGCG
TACAGCGCGTCGTACCTGCCCGCCCGCGAGATCCTGCAGGAGTGCTACGA
CGAGGTCGCCTCCGGCAATGAGATCAGGTCCGTGGTCATGCACGGCGACC
GCCTGCAGGAGTTCCCCATTGGCAAGATCGACGGCACGCACACATGGCAG
GTGGGGGAGAAGGTGCGCGCGGCGCGGGACGAGGACAAAATCCCCCTCAA
CCCCTTCACAGCGGGCGTGTACGTGGCCGTCATGATGGCGCAGATCGACG
TGCTGCGCAAGGCGGGGCACTCGTACACGGAGATCGTGAACGAGTCCGTC
ATCGAGGCGGTCGACTCGCTGTGCCCGTACATGCACTACAAGGGCGTCGC
GTTCATGGTGGACAACTGCTCCATCACGGCGCGCCTCGGCTCGCGCAAGT
GGGCGCCGCGCTTCGACTACATCCTGGAGCAGCTGGCGTACACGGCGGTC
GACAACGACGCGCCGATCAACGACGCACTCATCGAGGACTTCCTGGCGAA
CCCCGTGCACGACGCAATCCGCGTGTGCGGCGAGCTCAGGCCGAACGTGG
ACATCTCGTGCGCGGCGCCGTCGACCGTCAAGGAGATTGTGCTCAACTAG
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