mRNA_6581 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: A0A835YRB7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB7_9STRA) HSP 1 Score: 324 bits (831), Expect = 3.260e-112 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 Query: 1 IDHKTFERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVDFVKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRAEFNCTVFCLKLRA 495 IDHKTFERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVDFVKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRAEFNCTVFCLKLRA Sbjct: 1 IDHKTFERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVDFVKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRAEFNCTVFCLKLRA 165
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: A0A835ZCG5_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCG5_9STRA) HSP 1 Score: 240 bits (612), Expect = 5.400e-79 Identity = 118/154 (76.62%), Postives = 137/154 (88.96%), Query Frame = 1 Query: 1 IDHKTFERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVDFVKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRAEF 462 IDHK FE+ALYKATDSR+ALK TL YM+IM KL+ G VLSCI++ +VC I+L V+FV+A TWLTL LAF FCFGDTV+RLFEGLVLVFVW+P+G++DRVFINDDN +EMN VV+KINLLNTEFIRSDGQLCI+SNS+IQQRDVRNASRAEF Sbjct: 1 IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEF 154
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: A0A835YYX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX4_9STRA) HSP 1 Score: 252 bits (643), Expect = 4.090e-77 Identity = 125/165 (75.76%), Postives = 144/165 (87.27%), Query Frame = 1 Query: 1 IDHKTFERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVDFVKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRAEFNCTVFCLKLRA 495 IDHK FE+ALYKATDSR+ALK TL YM+IM KL+ G VLSCI++ +VC I+L V+FV+A TWLTL LAF FCFGDTV+RLFEGLVLVFVW+P+G++DRVFINDD +EMN VV+KINLLNTEFIRSDGQLCI+SNS+IQQRDVRNASRAEFNCTVF KL A Sbjct: 62 IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDYKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEFNCTVFFAKLHA 226
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: A0A2T9ZHK6_9FUNG (Uncharacterized protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZHK6_9FUNG) HSP 1 Score: 68.9 bits (167), Expect = 1.260e-10 Identity = 41/154 (26.62%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 16 FERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVDFVKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRAEFNCTVF 477 F+ L + R+ + TL ++ + F ++ +++ V+ ++ VD +K+ + TL++A+ F FG++++ F+ + + HP+ + D V I D + F V +INLL+T F+RSDG+ I NS + + N R++ +F Sbjct: 179 FQDCLIEFYFERTIIDKTLTSMSMVLKDIDKFFMLIVLMIVFVLGLMLTSVDPIKSLGSLATLMVAWSFVFGNSLKTCFDCFIFLITTHPYDIGDHVLIGDKD-----FTVKRINLLSTTFVRSDGRYTIFPNSFLATSQIINYRRSKNQSELF 327
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: A0A1X2G2G7_9FUNG (EF-hand domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G2G7_9FUNG) HSP 1 Score: 68.2 bits (165), Expect = 2.770e-10 Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 187 PTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRA 456 P W T +A F FG+T + F+ ++ VFV HPF DRVFI DN F V + LL T FI+ DG + + NSV+ + N RA Sbjct: 634 PLW-TAFIAASFIFGNTAKETFDSVIFVFVTHPFDAGDRVFIGTDN-----FTVDNVGLLVTTFIKWDGSVVYVKNSVLSTHYIINVRRA 717
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: K8EFR1_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EFR1_9CHLO) HSP 1 Score: 67.4 bits (163), Expect = 5.040e-10 Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 193 WLTL---VLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRAE 459 WLTL +LAF F FG+++R FEG++ +F+ HP+ V D + IN + FV+ IN+L TE +G++ N + + V N SR++ Sbjct: 601 WLTLSSFILAFAFMFGNSIRECFEGVIFIFITHPYDVGDNILINGNR-----FVIKNINILQTEAENWNGEVTYYHNQTMMRSTVINMSRSK 687
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: A0A2P6TJX5_CHLSO (Mechanosensitive ion channel 10 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJX5_CHLSO) HSP 1 Score: 67.0 bits (162), Expect = 7.150e-10 Identity = 45/144 (31.25%), Postives = 76/144 (52.78%), Query Frame = 1 Query: 25 ALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVDFVKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRA 456 ++ K R+ L TL+ ++ KL+ + +L + GVD KA T+ +++LAF F FG+++R +FE +V +F HP+ V D + I +N+ V++I LLNT +R+DG NS + + N SR+ Sbjct: 885 SVLKIYQERAFLACTLRDTKSVIGKLERLLGAIIHVLFGFFYLYIFGVDVTKAWLTFSSVILAFTFIFGNSIRTVFECVVWLFSVHPYDVGDTLVIGGENHR-----VAEIALLNTTLVRADGARIYRPNSRLNNESLFNLSRS 1023
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: A0A166A5F5_DAUCS (Mechanosensitive ion channel protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166A5F5_DAUCS) HSP 1 Score: 66.6 bits (161), Expect = 9.250e-10 Identity = 45/156 (28.85%), Postives = 78/156 (50.00%), Query Frame = 1 Query: 1 IDHKTFERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVD----FVKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRA 456 I K + + R AL +L K + KL + +++ ++ +++L V FV S +L +V F FG+T + +FEG++ +FV HPF + DR ++D + VV ++N+L T F+R D Q NSV+ + + N R+ Sbjct: 498 ISRKELKNWMVNTFKERRALVLSLNDTKKAVNKLHQMLNIFVGLIILIIWSLILKVASTQFFVLLSSQFLLVV----FVFGNTCKTMFEGIIFLFVMHPFDIGDRCEVDD-----VQLVVEEMNILTTTFLRYDNQKICYPNSVLSNKPISNYYRS 644
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: A0A8H7PGE9_9FUNG (EF-hand domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PGE9_9FUNG) HSP 1 Score: 65.9 bits (159), Expect = 1.740e-9 Identity = 40/153 (26.14%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 1 IDHKTFERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVDF-VKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRA 456 I + + R L ++++ + KL ++ I+ AV+ G++ P W T+ +A F FG++ + +FE ++ +FV HP+ + DRVFI +N + V + LL T F++ DG + + NS++ + + N SR+ Sbjct: 559 ISRRELRNGCIRIYKERKLLSASMRDLSQASGKLDVILLTIAAIIWAVIVCSCFGINVGTSLMPLW-TMFVAVSFIFGNSAKDMFESIIFIFVTHPYDIGDRVFIGTEN-----WQVKSMGLLITTFLKWDGTIVYVKNSILAPQYIFNVSRS 705
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Match: A0A8H7ETW4_9FUNG (EF-hand domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7ETW4_9FUNG) HSP 1 Score: 65.1 bits (157), Expect = 3.220e-9 Identity = 35/93 (37.63%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 175 VKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASR 453 V+ P W + A F FG++ + FE ++ VFV HPF DRVFI+ +N ++V K+ LL T FI+ DG + NSV+ + + N R Sbjct: 626 VELMPLWSAFIAA-SFVFGNSAKDAFESIIFVFVTHPFDAGDRVFIDSNN-----WIVHKVGLLVTTFIKWDGSVVYAKNSVLATQYIINCRR 712 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|146591 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6581 ID=mRNA_6581|Name=jgi.p|Trimin1|146591|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=495bp|location=Sequence derived from alignment at Contig_62:729610..730104- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATTGACCACAAGACGTTCGAGAGGGCGTTGTACAAGGCCACCGACAGCCGback to top protein sequence of jgi.p|Trimin1|146591 >Trimin1|146591|gw1.62.142.1 ID=Trimin1|146591|gw1.62.142.1|Name=jgi.p|Trimin1|146591|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=165bp IDHKTFERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCback to top mRNA from alignment at Contig_62:729610..730104- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6581 ID=mRNA_6581|Name=jgi.p|Trimin1|146591|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=495bp|location=Sequence derived from alignment at Contig_62:729610..730104- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_62:729610..730104- >mRNA_6581 ID=mRNA_6581|Name=jgi.p|Trimin1|146591|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=495bp|location=Sequence derived from alignment at Contig_62:729610..730104- (Tribonema minus UTEX_B_3156 )back to top |