mRNA_657 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: A0A835Z601_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z601_9STRA) HSP 1 Score: 699 bits (1804), Expect = 8.780e-255 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1 Query: 1 MTTKSASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGTVQFPFGLADMVIKG 1011 MTTKSASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGTVQFPFGLADMVIKG Sbjct: 1 MTTKSASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGTVQFPFGLADMVIKG 337
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: A0A835ZM96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZM96_9STRA) HSP 1 Score: 463 bits (1192), Expect = 1.310e-161 Identity = 212/332 (63.86%), Postives = 264/332 (79.52%), Query Frame = 1 Query: 10 KSASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGTVQFPFGLADMVI 1005 K+A+Q+L +IGIG+NLGQ FESK NSR+P QVRPWL ++ KGFGHVRIPVTWYP S AC L+D+ F+ LD++I+YAVKIGL +++N HHE W+ D YDGSD++N KFK LW++IA +Y+ Y Q +L+FEVLNEP GKFG S + CI LTR IN VG E IR VD+TRIVLVQPN GN+W+VP+VYP+K TLPG+GADK +G+Q HTYDHY FCLQ G+N +YKS++++ ADI KRV M+ KWH IGG D VALHLGEFGVGRLDQRQRDADIV+AYYR+TS L+R K IC TAWSD GWF + ++D+ V +PFGLAD ++ Sbjct: 3 KTATQILSEIGIGLNLGQVFESKQNSRRPDQVRPWLAAVKAKGFGHVRIPVTWYP--SDACVLDDSEFVHLLDDAIQYAVKIGLTLVINAHHEKWLFDYYDGSDVFNAKFKALWSRIAYKYRAYTQQQLLFEVLNEPDGKFGIGSASTTTG-CIELTRTINRVGYEGIRYVDATRIVLVQPNDAGNIWAVPRVYPTKATLPGAGADKSVGIQCHTYDHYNFCLQGGTNAFYKSVDDISADIGKRVAMLMKWHTDIGGQDTVALHLGEFGVGRLDQRQRDADIVRAYYRITSKLFRDKSICCTAWSDNGWFALTTMDASRRVTWPFGLADQIL 331
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: A0A836CFX5_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX5_9STRA) HSP 1 Score: 455 bits (1170), Expect = 2.910e-158 Identity = 210/333 (63.06%), Postives = 258/333 (77.48%), Query Frame = 1 Query: 10 KSASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGTVQFPFGLADMVIK 1008 K+A+QVL IG G+NLGQ FESK +SR ++RPWL ++ KGFGHVRIPVTWYPG +H C L+D FM LD++ ++AVK+GL VI+N HHEDW+ YDGS YN KFK+LW +IA +Y Y Q ++IFEVLNEP+ KFG +A S+ CI LTR IN G IRAV +TR+VLVQPN GN+WSVP VYP K +LPG+GADKYLG+QFHTYD+Y FCLQ G N++YKS+ ++ AD+ KR+ MI KWH IG D VA+HLGEFGVGRLDQRQRDADIV+AYY+LTS L+R+K ICVTAWSDGGWF + D+R TV +PFGLAD V+K Sbjct: 3 KTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSA-CIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIG-KDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQTVTWPFGLADQVLK 333
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: A0A836CEX1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX1_9STRA) HSP 1 Score: 268 bits (685), Expect = 7.240e-84 Identity = 134/336 (39.88%), Postives = 208/336 (61.90%), Query Frame = 1 Query: 13 SASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDE---SADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGT-VQFPFGLADMVIK 1008 +A+Q+L + G+NLG T ++ +S PA + L IR +G+GHVRIPV+W P + C+++ F+ +++++++A+ +GL VI+N HHE W+ YDGS +F +W +IATR++ PQNKL+FEVLNEP G G S+ S E +ALTR +N G IR+V R+VL+QPN MG+++ K++P+ + LPG G D+YL V H+Y + F GS+ + S L ADI +R E + +W ++ V +H+GEFGVGR+++ RD+D+V+AYYR S R GI AW DGG F + + T +QF +G+++ ++ Sbjct: 9 AAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTR-YDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVP----VPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLS 339
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: A0A836CFT8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT8_9STRA) HSP 1 Score: 244 bits (623), Expect = 2.370e-75 Identity = 131/338 (38.76%), Postives = 183/338 (54.14%), Query Frame = 1 Query: 13 SASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRA----DIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGW--FNVASLDSRGT-VQFPFGLADMVI 1005 +A+++ +G G+NLG T ++ N+R + L +RQKGF HVRIPVTW P C++N F+ ++ ++ A+ +G VILN HHE W+ YDGS N F LW ++A +K PQ+KL+FE+LNEP G +A LTR +N G A+RA+ TRIVL+QPN +G+ W+ Y + LPG G DKYL + H+Y KF L GSN Y+ + + A ++K + + K + +G V HLGEFGVGR + RDA IV YYR + R I T W DG F + + D V F F LA V+ Sbjct: 4 TAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTS-YDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQ-----LTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPV---HLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVL 332
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: A0A836CL48_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL48_9STRA) HSP 1 Score: 239 bits (609), Expect = 4.430e-73 Identity = 129/338 (38.17%), Postives = 186/338 (55.03%), Query Frame = 1 Query: 13 SASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMI----KKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGW--FNVASLDSRGT-VQFPFGLADMVI 1005 +A+++ +G G+NLG T ++ +SR + + L +R+KGF HVRIPVTW P ++N F+ ++ ++ A+++G VILN HHE W+ YD S N F LW +I+ +K PQ+KL+FE+LNEP G +A LTR +N G A+RAV TRI+L+QPN +G+ W+ Y + LPG G DKYL V H+Y +F L +GSN Y+ ++ + A + K V+ + K + +G V HLGEFG+GR + RDA IV YYR + R I T W DG F + + D T V F F LA V+ Sbjct: 4 TAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLT-AYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQ-----LTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPV---HLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVL 332
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: A0A3D1G8F2_9BACT (Glycoside hydrolase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G8F2_9BACT) HSP 1 Score: 234 bits (596), Expect = 7.250e-71 Identity = 145/336 (43.15%), Postives = 192/336 (57.14%), Query Frame = 1 Query: 13 SASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTW---YPGNSHACQLNDALF----MQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSEC--IALTRLINLVGLEAIRAV---DSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDV-VALHLGEFGVGRLDQR-QRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGTVQF 978 SA++V+ +G GVN+G TF+ + PA + + G H+RIPVTW Y G+ A + + F + L+N ++YA+ GL V +NTHHE W+ D YDGSD + F LWTQIAT +K YPQ +LIFEVLNEP G FG+ S + IALTR IN VG AIRA + RI+ + N MGN + VYP+ LPG G+D YL +Q HTYD + FC Q G N Y A I V+ IKK VT + + V L+ GE+GVGR D + +RD D+V+ +Y+L +G TAW D GWF + S+D GTV F Sbjct: 37 SANEVVIQMGSGVNIGNTFDLDSHDTSPALNKLIIDTYIDAGMDHIRIPVTWMDGYSGDHLADEAGNINFSHPRFKDLENVVDYALSKGLYVTINTHHEHWLFDSYDGSDEIDAVFSNLWTQIATHFKDYPQ-RLIFEVLNEPQGNFGEWGGSVVPGDARGIALTRQINNVGYHAIRATGGNNEQRIIQIGVNGMGNHSQLDDVYPTIAELPGKGSDPYLMIQVHTYDPWTFCGQTGRNSEYPG----EASI---VQSIKK--VTGHASQLNVPLNFGEWGVGRDDNKPERDTDLVRNHYKLMRQTILAEGAAPTAWEDRGWFGLISVDG-GTVSF 361
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: A0A812JPA8_9DINO (CelCCD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JPA8_9DINO) HSP 1 Score: 233 bits (594), Expect = 3.450e-70 Identity = 123/319 (38.56%), Postives = 187/319 (58.62%), Query Frame = 1 Query: 7 TKSASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIAL--TRLINLVGLEAIRAV--DSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQ--RDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNV 945 T S S + ++ G+N+G ++ +R PA V+ + +GF H+R+PVTW G A D+ + + ++YA+ +GL V++NTHHE W+ DGYDGS Y +F LWT IA + Y ++L FEVLNEP FG + + D + IA+ TR IN +G AIR+V + R++ + PNAM ++ + +YPSK +LPG G D +GV HTYD Y FC + G YY S N ++ D+ + + I+ W + + +++GE+GVGR RQ RD +IV+ YY+ T+ +R+ G+ V AW D GWF + Sbjct: 78 TWSCSSTVQNMSRGINIGNVYDYDQGNRDPAVVKQQVKWAYDEGFRHIRLPVTW-DGYFDA----DSELTKQVTEVVDYALGLGLHVVINTHHEHWLKDGYDGSQHYKDQFWNLWTGIAGHFA-YKSSRLSFEVLNEPDKAFGSWNGNPDPFDQIAIDRTREINGLGYSAIRSVAGNQDRMIFLHPNAMSSIGTAKSIYPSKGSLPGEGNDACVGVTVHTYDPYDFCGENGQTSYYASSNAMKKDLSSQFKDIRDWAF----DTFIPVYVGEYGVGRQTDRQWDRDNEIVREYYKFTANHFRESGMAVAAWDDPGWFGI 386
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: A0A1N6EXW3_9FLAO (Aryl-phospho-beta-D-glucosidase BglC, GH1 family n=4 Tax=Chryseobacterium group TaxID=2782232 RepID=A0A1N6EXW3_9FLAO) HSP 1 Score: 227 bits (579), Expect = 2.850e-68 Identity = 132/335 (39.40%), Postives = 186/335 (55.52%), Query Frame = 1 Query: 13 SASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYP-------GNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESA---DSSECIAL--TRLINLVGLEAIRAV---DSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQR-QRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGT 969 SA +++ D+G G NLG TF++ ++ A ++P + + G HVRIP TW N+ +N F++ L I+YA+ L VILNTHHE W+ D YDGS+ Y+ KF+ LWT IAT +K YPQ KLIFEVLNEP G G+ D + D ++ +AL TR +N VG +AIRA + R+++V N GN + VYPSK +LPG G D YL +Q HTY + FC + GSN + IQ +K + + V +H GEFGVGR +R+ D+V+ YYR + + + + W D GWF A ++ GT Sbjct: 42 SAKKIIADMGPGFNLGNTFDNGIHPTSLAAIKPVIDLYKNAGMKHVRIPTTWMDRFSSTLADNNGNINVNHPRFIE-LKAVIDYALSKDLYVILNTHHESWLKDHYDGSEQYDTKFRTLWTGIATYFKDYPQ-KLIFEVLNEPEGNLGELDGNGPFPDPTDALALQYTRKVNQVGYDAIRATHGNNEKRLIMVGTNGQGNALYISNVYPSKSSLPGGGNDDYLSIQVHTYSPWAFCGETGSNAAFPGTASFETGIQN----VKAHSIKLN----VPVHYGEFGVGRSSNTAERNTDLVRNYYRTMARTTLAQSMSYSVWDDRGWF--ALINPTGT 364
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Match: UPI00199561EE (Cellulase family glycosylhydrolase n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI00199561EE) HSP 1 Score: 225 bits (574), Expect = 1.590e-67 Identity = 126/328 (38.41%), Postives = 190/328 (57.93%), Query Frame = 1 Query: 13 SASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPG-NSHACQLNDALF-----MQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESA----DSSECIALTRLINLVGLEAIRAV---DSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDV---VALHLGEFGVGR-LDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNV 945 +A +++ D+G G NLG TFES N+ P+ + + G HVRIPVTW G S+ N L + L ++YA+ + V++NTHHE WI + YDG+D Y+ KF KLW IAT +K YP+ L+F+V+NEP GK G+ + + +A TR +N VG +AIRA ++TRI++V+PN GN + +VYP+K +LPG+GAD YL +Q HTYD + FC + G+N + + I+K +G + V V ++ GEFGVGR + +R+ D+V+ YYR+ ++ + + + TAW D GWF + Sbjct: 39 TAKEIIVDMGGGFNLGNTFESNANATTPSINKQIIDLYYDAGARHVRIPVTWVEGFTSNLADANGNLNTTHPRLLELKEVVDYALSKKMYVVINTHHEHWIKNNYDGTDTYDTKFAKLWAGIATFFKDYPKQ-LLFDVINEPEGKLGQWSGTTYPLPTGATQLAWTRQVNKVGYDAIRAAGGNNATRIIMVEPNGQGNQGQIEEVYPTKASLPGAGADAYLAIQVHTYDPWAFCGETGTNAGWPGSTSIENAIKK-----------VGVHSVLIDVPVNYGEFGVGRQANTAERNTDLVRGYYRIFNVTCKSQKMSFTAWDDRGWFGL 354 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157124 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_657 ID=mRNA_657|Name=jgi.p|Trimin1|157124|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1014bp|location=Sequence derived from alignment at Contig_2:1064688..1065701+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACGACAAAGTCTGCATCGCAAGTTCTGGGTGACATTGGCATTGGCGTback to top protein sequence of jgi.p|Trimin1|157124 >Trimin1|157124|e_gw1.2.164.1 ID=Trimin1|157124|e_gw1.2.164.1|Name=jgi.p|Trimin1|157124|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=338bp MTTKSASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVback to top mRNA from alignment at Contig_2:1064688..1065701+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_657 ID=mRNA_657|Name=jgi.p|Trimin1|157124|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1014bp|location=Sequence derived from alignment at Contig_2:1064688..1065701+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:1064688..1065701+ >mRNA_657 ID=mRNA_657|Name=jgi.p|Trimin1|157124|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1014bp|location=Sequence derived from alignment at Contig_2:1064688..1065701+ (Tribonema minus UTEX_B_3156 )back to top |