mRNA_6465 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: A0A835YMY4_9STRA (Tyrosine phosphatase family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY4_9STRA) HSP 1 Score: 152 bits (385), Expect = 3.730e-47 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1 Query: 1 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR Sbjct: 1 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 72
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: A0A4P9XUQ0_9FUNG (Protein-tyrosine phosphatase (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XUQ0_9FUNG) HSP 1 Score: 67.4 bits (163), Expect = 2.420e-12 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 1 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 I L Q G+ D+ E+ + AL +LLD + +PIL+ C+ G H LIGCLR+LQHWS T+I DE R Sbjct: 60 IRLFQFGVAGNKEPFVDIPEDVICAALAVLLDRRNHPILIHCNKGKHRTGCLIGCLRKLQHWSHTSIFDEYR 131
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: A0A4P9Z3Q4_9FUNG (Protein-tyrosine phosphatase (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z3Q4_9FUNG) HSP 1 Score: 67.0 bits (162), Expect = 3.420e-12 Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 1 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 + L Q G+ D+ E+ + AL +LLD + +PI++ C+ G H L+GCLR+LQHWS TAI DE R Sbjct: 60 VTLFQFGVAGNKEPFVDIPEDVICAALAVLLDRRNHPIVIHCNKGKHRTGCLVGCLRKLQHWSHTAIFDEYR 131
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: A0A4Q0A239_9FUNG (Protein-tyrosine phosphatase (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4Q0A239_9FUNG) HSP 1 Score: 65.9 bits (159), Expect = 3.430e-12 Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 1 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 I L Q G+ D+ ++ + AL +LLD + +PIL+ C+ G H L+GCLRRLQHWS TAI +E R Sbjct: 9 IQLYQFGVAGNKEPFVDIPQDTICAALAVLLDRRNHPILIHCNKGKHRTGCLVGCLRRLQHWSHTAIFNEYR 80
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: F4NZ66_BATDJ (Tyrosine-protein phosphatase domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NZ66_BATDJ) HSP 1 Score: 68.2 bits (165), Expect = 5.110e-12 Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 1 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 I L Q G+ D+ EE V AL +++D + +P+L+ C+ G H L+GCLR++QHWSMT+I DE R Sbjct: 150 IHLFQFGVAGNKEPFVDIPEETVCAALSVIMDERNHPLLIHCNKGKHRTGCLVGCLRKMQHWSMTSIFDEYR 221
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: A0A1S8VN46_9FUNG (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VN46_9FUNG) HSP 1 Score: 68.6 bits (166), Expect = 5.260e-12 Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 1 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 I L Q G+ D+ EE V AL +++D + +P+L+ C+ G H L+GCLR++QHWSMT+I DE R Sbjct: 194 IRLFQFGVAGNKEPFVDIPEETVCAALSVIMDQRNHPLLIHCNKGKHRTGCLVGCLRKIQHWSMTSIFDEYR 265
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: A0A7S0U692_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U692_HEMAN) HSP 1 Score: 67.4 bits (163), Expect = 1.180e-11 Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 1 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 + + + G+ D+ +E +K AL+ LLD + +P+L+ C+ G H L+GCLR + HWSMTAI DE R Sbjct: 174 VTVFEHGVSGNKEPFVDISDEMIKTALQRLLDVRNHPVLIHCNQGKHRTGSLVGCLRAMNHWSMTAIFDEYR 245
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: L1IX82_GUITC (Tyrosine-protein phosphatase domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IX82_GUITC) HSP 1 Score: 65.1 bits (157), Expect = 1.600e-11 Identity = 27/53 (50.94%), Postives = 43/53 (81.13%), Query Frame = 1 Query: 58 EEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 ++ +K ALE++LDH+ +P+L+ C++G + L+GCLRRLQ+WS+T+ILDE R Sbjct: 79 DDFIKDALEMVLDHRKHPLLICCTSGVFQTAPLVGCLRRLQNWSLTSILDEYR 131
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: A0A507DSA7_9FUNG (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DSA7_9FUNG) HSP 1 Score: 67.0 bits (162), Expect = 1.610e-11 Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 1 IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 I L Q G+ D+ E+ + AL +LLD + +PIL+ C+ G H L+GCLR+LQHWS T+I DE R Sbjct: 157 IQLFQFGVAGNKEPFVDIPEDTICAALTVLLDRRNHPILIHCNKGKHRTGCLVGCLRKLQHWSHTSIFDEYR 228
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Match: A0A0D2WXR3_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WXR3_CAPO3) HSP 1 Score: 64.3 bits (155), Expect = 1.970e-11 Identity = 28/55 (50.91%), Postives = 42/55 (76.36%), Query Frame = 1 Query: 52 VGEEAVKGALELLLDHKLYPILLVCSAGSHLCSRLIGCLRRLQHWSMTAILDEVR 216 V +E VK ALE+ LD +P++L+CS+G H ++GCLRRLQ+W++T+IL+E R Sbjct: 28 VSDELVKEALEITLDVTTHPVMLMCSSGIHQTGTIVGCLRRLQNWNLTSILNEYR 82 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|132964 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6465 ID=mRNA_6465|Name=jgi.p|Trimin1|132964|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=216bp|location=Sequence derived from alignment at Contig_62:59070..59285- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATTGCATTGTTGCAGGAAAACCCCTGCGGCGATTATCCCGGCGACTACGAback to top protein sequence of jgi.p|Trimin1|132964 >Trimin1|132964|gw1.62.35.1 ID=Trimin1|132964|gw1.62.35.1|Name=jgi.p|Trimin1|132964|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=72bp IALLQENPCGDYPGDYDVGEEAVKGALELLLDHKLYPILLVCSAGSHLCSback to top mRNA from alignment at Contig_62:59070..59285- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6465 ID=mRNA_6465|Name=jgi.p|Trimin1|132964|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=216bp|location=Sequence derived from alignment at Contig_62:59070..59285- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_62:59070..59285- >mRNA_6465 ID=mRNA_6465|Name=jgi.p|Trimin1|132964|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=216bp|location=Sequence derived from alignment at Contig_62:59070..59285- (Tribonema minus UTEX_B_3156 )back to top |