mRNA_639 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157087
Unique NamemRNA_639
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: A0A835Z312_9STRA (Zinc/iron permease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z312_9STRA)

HSP 1 Score: 588 bits (1517), Expect = 2.250e-211
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1 
Query:    1 MADECASEELDSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGDKNARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA 981
            MADECASEELDSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGDKNARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA
Sbjct:    1 MADECASEELDSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGDKNARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA 327
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: A0A835Z5J7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J7_9STRA)

HSP 1 Score: 340 bits (873), Expect = 1.090e-113
Identity = 203/323 (62.85%), Postives = 232/323 (71.83%), Query Frame = 1 
Query:   13 CASEELDSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGDKNARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA 981
            C++++L++YSV  HVG LFI+LACGGLGA LP +++  PRL+P DDV+TFGNFFGAGVVLATA IHMI PAI NL+NPCLG   E YE L LLI + +I  MQ LEF    H                        XXXXXXX  XXXXX  HG D     +R  VT+++FE+GVALHSVIIGVSLGVV G  F TLL ALVFHQFFEG ALGSAV  T+PT         AFALSAP+GTAIGIG R+SFN NATATLWLLG FEA+SGG LIYT LVELITYGLTL+PRF  + A A S+AAAF GMY GAAAMS++GKWA
Sbjct:    8 CSADDLENYSVGDHVGGLFIILACGGLGALLPVLAYRFPRLKPYDDVVTFGNFFGAGVVLATAFIHMIPPAIANLSNPCLGPITEDYEPLALLITMAAIFLMQLLEF--RQH------------------XXXXXXXXXXXXXXXXXXXXPDHGGD-DTARSRSLVTMIVFELGVALHSVIIGVSLGVVGGREFTTLLVALVFHQFFEGLALGSAVVLTEPTARAAFAAAGAFALSAPLGTAIGIGARASFNANATATLWLLGAFEALSGGTLIYTALVELITYGLTLSPRFAARGAPAGSVAAAFLGMYSGAAAMSVLGKWA 309
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: A0A6G0X705_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X705_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.550e-68
Identity = 139/331 (41.99%), Postives = 192/331 (58.01%), Query Frame = 1 
Query:   31 DSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHG-------------MDLGDKN-ARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA 981
            D+Y  S H+ A+FI+      G+  P +S HV  L     V+   N FG GVVLATA IHMI PAIE L NPCL  +   YE L ++ V++++L MQ +E  L L + +    V +   D         A       V        HG              DL D +  R  + VL+FE+GVA+HSVIIG++LGVV+G+SF TLL AL FHQFFEG A+GS+      ++ T V+T  AF+L+ P+G  +GIG+ SS++E +T +LW+ G  +AI+GGILIYTGLVEL+TY  T+NP F  K      +   F  +++GA AM+++G WA
Sbjct:   42 DAYDTSMHIAAVFIIFGVSIAGSMFPVVSAHVACLHKSRSVVALLNAFGFGVVLATACIHMIPPAIETLNNPCLNLS---YEGLAMVFVVLTVLLMQVIETELVLLVSKPPAAVALIETDEEDVEHGNRAVAAFTS-VSTPTVPVVHGDHXXXXXXXXAPSSDLKDSSDVRKKINVLIFEIGVAIHSVIIGLNLGVVTGNSFTTLLTALCFHQFFEGVAVGSSAVSAFSSVRTAVSTAVAFSLTTPLGIVVGIGINSSYSETSTTSLWVRGTLDAIAGGILIYTGLVELLTYQYTINPEFHTKSTGLRWLNYLF--LWLGAGAMAVVGYWA 366
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: A0A1V9YGF4_9STRA (Zinc (Zn2)-Iron (Fe2) Permease (ZIP) Family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGF4_9STRA)

HSP 1 Score: 222 bits (566), Expect = 8.700e-67
Identity = 142/329 (43.16%), Postives = 191/329 (58.05%), Query Frame = 1 
Query:   10 ECASEE--LDSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRR---GAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGDKNARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA 981
            EC   E   D+Y  + H+ A FIV A   +GA LP IS +VP LR     +   + FG GVV++TA +HMI PAI  L N CLG     YE + ++IVL +I  MQ LE  L + L +   GAK   M AG A PA     A       V       +  +       R  ++VL+FE GVA+HSVI+GV LGV SGD F TL+ A+ FHQFFEG A+GS+       + T   +  A+AL+ P+G  IGI + SS+++ +   LW+ G F+AI+GGIL+YTG+VELITY  T+NP F  K      +   +  +Y+G+AAM+IIGKWA
Sbjct:   36 ECGEVEGDPDTYDTNLHIAAAFIVFAASIVGAMLPVISSYVPCLRRNQSGMEMLSSFGFGVVISTAFVHMIPPAITTLNNKCLGLN---YEGVAMVIVLATIYLMQLLETELMIVLSKYTTGAK--DMEAGVATPARSPELAHGHAHGVVSATPTDEESAL-------RQKISVLIFEAGVAVHSVIVGVELGVSSGDEFPTLIVAICFHQFFEGVAVGSSALSAFSDMKTLSLSAFAYALTTPLGVVIGILISSSYSDTSPTALWVKGTFDAIAGGILVYTGIVELITYHYTINPDFHKKTFTGRGLN--YMCLYLGSAAMAIIGKWA 350
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: A0A6G0X6Q7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6Q7_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.540e-66
Identity = 134/336 (39.88%), Postives = 192/336 (57.14%), Query Frame = 1 
Query:    4 ADECAS--EELDSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGDKNA--------RLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA 981
            AD+C +     + Y +  HV A+FI+L    LG+  P ++ HV  LR    +L   N FG GVV++TA IH+I PA+E   NPCL      YE L ++ V+ ++L MQ LE  L L + + A  VP+ A D   A     A                        N+        R  + VL+FE+GVA+HSVI+G+ +GV +G S  TLL A+ FHQFFEG A+GS+      T  +++ T   F+LS P+G AIGIGV S+++E +  +LW+ G  +A++GGILIYT +VEL+TY  T+NP F  K +   S+   F  +++GAAAM+I+GKWA
Sbjct:   30 ADDCGALLNAGEPYDLPLHVAAVFIILGVSFLGSIFPVVAKHVACLRKNPSILALLNSFGFGVVVSTAFIHLIPPAVETFNNPCLNIG---YEGLGMVFVVATVLLMQVLETELVLLVTKPA--VPVLATDEEDAEHGNGAISVFASTTTPAVSNGHXXXXXXASNSGLKEQSDTRKKLNVLIFEIGVAVHSVIVGLEMGVATGSSLKTLLIAICFHQFFEGIAVGSSAVSAFSTARSSILTAIMFSLSTPIGIAIGIGVNSTYSETSVTSLWVRGTMDAVAGGILIYTSIVELLTYLYTINPEFHAKSSGLRSLNYLF--LWLGAAAMAIVGKWA 358
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: W4FET2_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FET2_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.940e-66
Identity = 141/321 (43.93%), Postives = 195/321 (60.75%), Query Frame = 1 
Query:   31 DSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHL----RRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGDKNARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA 981
            D Y    H+ A+FIV      G+ LP +S +V  LR    +L+  N FG GVV+ATA IHMI  A+E L NPCL      Y  L ++IV+ ++ AMQALE  L L L    + G          A     +  A    XXX  XXXXX +H  DL   + R  + VL+FE+GVA+HSVIIG++LGV +GD F TLL A+ FHQFFEG A+GS+       + T++ T  A++L+ P+G AIGI V +S++E +  +LW+ GV +A++GGIL+YTG+VEL+TY  T++  F  K     S+   F  +++GA AM+IIGKWA
Sbjct:   41 DIYDQKLHIAAIFIVFGVSIFGSFLPVVSSYVSCLRNSQKLLSLLNSFGFGVVIATAFIHMIPAAMETLGNPCLNMG---YPGLAMVIVVGTVFAMQALETELVLMLTNTDKPGINSADTSIETAAVVVSSPVAGDYHXXXXXXXXXXGEH--DLKSSDTRKKINVLIFEIGVAIHSVIIGLNLGVATGDGFTTLLVAICFHQFFEGVAVGSSAVTAFSNVRTSIVTAVAYSLTTPLGIAIGIAVNTSYSETSLTSLWVRGVLDAVAGGILVYTGIVELLTYQYTISHEFHAKSGGLRSLHYLF--LWLGAGAMAIIGKWA 354
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: A0A485L2K1_9STRA (Aste57867_14796 protein n=3 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2K1_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.260e-65
Identity = 131/320 (40.94%), Postives = 190/320 (59.38%), Query Frame = 1 
Query:   31 DSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGM----DLGDKNARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKW 978
            D Y  + H+ A+FI+ A   LG+ LP IS+++  LR     L+  N FG GVV+ATA IHMI PAI+ L N CL  +   Y  L ++ V+ ++LAMQ LE  L L + +    +     D L AA             Q       H +    DL     R T+ VL+FE+GVA+HSVIIG++LGV +G +F TLL AL FHQFFEG A+G++      ++ T++ T   F+L+ P+G AIG+ +  S+++ ++A+LW+ G  +AI+GGIL+YTGLVEL+TY  T+N  F  K     S+   F  +++GAAAM+ +G W
Sbjct:   33 DEYDQAMHIAAIFIIFAMSILGSMLPVISNYISCLRNSRKALSLLNSFGFGVVVATAFIHMIPPAIDTLNNKCLNLS---YNGLAMVFVVGTVLAMQLLETELVLFMTKKMTTLESSTDDHL-AAPKEYEVSLTPAAPQPSHDHHHHNLCTTDDLKSNAMRKTINVLIFEVGVAIHSVIIGLNLGVATGTTFNTLLVALSFHQFFEGVAVGTSSVSAFSSVRTSIYTAIGFSLTTPIGIAIGMAINGSYSDTSSASLWVRGTLDAIAGGILVYTGLVELLTYQYTINQEFHDKTQSTRSLTYVF--LWLGAAAMAGVGYW 346
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: A0A1V9YIB3_9STRA (Zinc (Zn2)-Iron (Fe2) Permease (ZIP) Family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIB3_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.150e-64
Identity = 130/317 (41.01%), Postives = 187/317 (58.99%), Query Frame = 1 
Query:   31 DSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGDKNARLT-VTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKW 978
            D Y ++ HVG++FI+LA    G+ +P +S H+  ++    V+++ N FG GVV+ATAL+HM+ PA E L N CLG +   Y  L  +I + S+L +Q ++  L     R A        DA  A              Q       HGM     + +   ++VL+FE+GVA+HSVIIG++LGV SG +F TLL A+ FHQFFEG A+G++       L  T+ TIAA+ L+ P+G  IGIGV ++++E +T  LW+ G  +A++GGILIYTG+VEL+T   T N  F  KDA   ++  AF  +  GA AMSI+G W
Sbjct:   19 DDYDMALHVGSIFIILAFSLFGSMMPVVSKHLSCMKQASAVMSYVNAFGVGVVIATALVHMLPPANEALNNKCLGLS---YNGLANVIAVASVLLLQVVQTELT---ARYAVTQTKSIEDAPDAVDVKTHADSPSNAAQFHGHGHVHGMGTSSNDVQSRRISVLIFELGVAIHSVIIGLNLGVASGSTFTTLLTAICFHQFFEGVAVGTSALFAFAELKATLWTIAAYTLTTPLGIVIGIGVSTTYSETSTTALWVQGCLDAVAGGILIYTGVVELLTNQYTNNGDFHAKDASRRALTYAF--VAAGACAMSIVGYW 327
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: W4FCK4_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCK4_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.710e-64
Identity = 132/323 (40.87%), Postives = 184/323 (56.97%), Query Frame = 1 
Query:   22 EELDSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGD---KNARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA 981
            E+ D Y    HV A+FIV     LG+ LP +S +V  LR    +L+  N FG GVV++TA IHMI  A   L NPCL      Y  + ++IV+ + LAMQ LE  L L L +  +     + D                          HG   GD    N    + VL+FE+GVA+HSVIIG+ LGV +GD F TLL A+ FHQFFEG A+GS+       + ++V T  A++L+ P+G AIGI V SS++  +  +LW+ GV ++++GGIL+YTG+VEL+TY  T+N  F  K     S+   F  +++GAA+M+IIGKWA
Sbjct:   39 EDKDDYDQGIHVAAIFIVFGVSILGSLLPVVSSYVSCLRNSQKLLSLLNSFGFGVVISTAFIHMIPSATYMLGNPCLELT---YNGIAMVIVVATALAMQLLETELVLLLTKNQQ--DNNSADLAKLTTDIETSVAPIVPATDGHYHSHHGHSHGDLAKNNTHKKINVLIFEIGVAIHSVIIGLDLGVSTGDGFITLLVAICFHQFFEGVAVGSSAVTAFSNIRSSVFTAVAYSLTTPLGIAIGIAVNSSYSNTSVTSLWVRGVLDSVAGGILVYTGIVELLTYQYTINQEFHAKSGGIRSLNYLF--LWLGAASMAIIGKWA 354
[Close]
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Match: A0A485L3D1_9STRA (Aste57867_14794 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3D1_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.970e-64
Identity = 134/326 (41.10%), Postives = 193/326 (59.20%), Query Frame = 1 
Query:   25 ELDSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDDVLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVLVSILAMQALEFVLALHLRRGAKRV---PMGAGDALPAAMATAAXXXXXXXVQXXXXXXQHGMDLGDKNA----RLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFATLLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIGVRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKDARACSMAAAFAGMYMGAAAMSIIGKWA 981
            ++D Y  + H+GA+FIV A   +G+ LP +S +V  LR    +L+  N FG GVV+ATA IHMI  A E+L NPCL      Y  L ++IV++++L MQALE  L L   + A       +   D    A    A     XX             + D NA    R  + VL+FE+GVA+HS IIG+ LGV +G SF TLL A+ FHQFFEG A+GS+      +  ++V T   ++L+ P+G A+G+ + SS+++ ++A+LW+ G  +AI+GGIL+YTGLVEL+TY  T+N  F  K     S+A  F  +++GA AM+I+G WA
Sbjct:   46 DMDDYDTAMHIGAIFIVFAVSIVGSMLPVLSSYVSCLRNNSSILSLLNSFGFGVVVATAFIHMIPSASESLNNPCLNVG---YSGLAMVIVVLTVLVMQALETELLLFWTKKAIATCSTDVEKADGYDLASTPVADHHHPXXXXPVGL-------VEDANATSAMRKVINVLIFEVGVAIHSFIIGLDLGVATGSSFNTLLVAISFHQFFEGVAVGSSAVSAFTSTRSSVLTAIGYSLTTPLGMALGVAISSSYSDTSSASLWVRGTLDAIAGGILVYTGLVELLTYQYTINQEFHAKPMSMRSLAYLF--LWLGAGAMAIVGYWA 359
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157087 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z312_9STRA2.250e-211100.00Zinc/iron permease n=1 Tax=Tribonema minus TaxID=3... [more]
A0A835Z5J7_9STRA1.090e-11362.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6G0X705_9STRA1.550e-6841.99Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9YGF4_9STRA8.700e-6743.16Zinc (Zn2)-Iron (Fe2) Permease (ZIP) Family n=1 Ta... [more]
A0A6G0X6Q7_9STRA1.540e-6639.88Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
W4FET2_9STRA1.940e-6643.93Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A485L2K1_9STRA1.260e-6540.94Aste57867_14796 protein n=3 Tax=Aphanomyces stella... [more]
A0A1V9YIB3_9STRA1.150e-6441.01Zinc (Zn2)-Iron (Fe2) Permease (ZIP) Family n=1 Ta... [more]
W4FCK4_9STRA1.710e-6440.87Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A485L3D1_9STRA1.970e-6441.10Aste57867_14794 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:976813..978374 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157087|e_gw1.2.294.1
DescriptionZinc (Zn2 )-Iron (Fe2 ) Permease (ZIP) Family. Source PGD
COG categoryP
Max annot lvl121069|Pythiales
EggNOG OGsKOG1558@1|root,KOG1558@2759|Eukaryota,1ME3I@121069|Pythiales
Evalue4.42e-63
Seed ortholog65071.PYU1_T008971
Hectar predicted targeting categorysignal anchor
TranscriptId157409
TrackFilteredModels1
ProteinId157087
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157087gene_639Tribonema minus UTEX_B_3156 geneContig_2 976813..978374 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_639_1exon_639_1Tribonema minus UTEX_B_3156 exonContig_2 976813..976993 +
exon_639_2exon_639_2Tribonema minus UTEX_B_3156 exonContig_2 977200..977450 +
exon_639_3exon_639_3Tribonema minus UTEX_B_3156 exonContig_2 977496..977699 +
exon_639_4exon_639_4Tribonema minus UTEX_B_3156 exonContig_2 978027..978374 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_639CDS_639Tribonema minus UTEX_B_3156 CDSContig_2 976813..976993 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157087Trimin1|157087|e_gw1.2.294.1Tribonema minus UTEX_B_3156 polypeptideContig_2 976813..978374 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_639 ID=mRNA_639|Name=jgi.p|Trimin1|157087|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=984bp|location=Sequence derived from alignment at Contig_2:976813..978374+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGACGAGTGCGCCTCCGAAGAACTGGATTCCTACAGCGTGTCAGC
CCATGTGGGAGCCCTGTTTATCGTCTTGGCTTGCGGAGGCCTGGGGGCCA
CTCTGCCAGCCATCAGCCATCACGTCCCTAGGCTCAGGCCGCAGGACGAC
GTGCTCACCTTTGGCAACTTTTTCGGGGCAGGCGTGGTGCTGGCGACGGC
CCTCATCCACATGATAATGCCGGCCATCGAAAACCTGACCAACCCATGCC
TGGGCGCCGCGGCCGAGGTGTACGAGGCGCTGCCGCTGCTCATCGTCTTG
GTCTCCATCCTCGCTATGCAAGCGCTGGAGTTCGTCTTGGCGCTGCACCT
GCGCCGCGGCGCCAAGCGCGTGCCCATGGGCGCCGGCGACGCGCTGCCCG
CCGCCATGGCCACGGCCGCCGCGGCGCCGGCGGCGGGCAGTGTGCAGGAG
CGGCGCCACCACCACCAGCACGGGATGGACCTGGGCGACAAGAATGCACG
CTTGACGGTGACCGTGCTGCTGTTTGAGATGGGCGTGGCGCTGCACAGCG
TGATCATCGGGGTGTCGCTGGGCGTCGTCAGCGGCGACAGCTTCGCCACG
CTGCTCGCGGCGCTGGTTTTCCACCAGTTCTTTGAGGGCTTCGCGCTGGG
CTCCGCGGTCGCGCAGACAGACCCGACACTGTGCACCACCGTCACCACCA
TCGCCGCCTTCGCGCTGTCAGCGCCAGTCGGCACGGCCATCGGCATTGGC
GTGCGCTCGTCCTTTAACGAGAACGCGACGGCGACGCTGTGGCTGCTGGG
CGTGTTTGAGGCCATCAGCGGCGGCATACTCATCTACACGGGCCTCGTGG
AGCTCATCACGTATGGGCTGACGCTCAACCCGCGCTTCACGGGCAAGGAC
GCGCGCGCCTGCAGCATGGCCGCCGCCTTCGCCGGCATGTACATGGGTGC
CGCGGCCATGTCCATCATTGGGAAGTGGGCATGA
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protein sequence of jgi.p|Trimin1|157087

>Trimin1|157087|e_gw1.2.294.1 ID=Trimin1|157087|e_gw1.2.294.1|Name=jgi.p|Trimin1|157087|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=328bp
MADECASEELDSYSVSAHVGALFIVLACGGLGATLPAISHHVPRLRPQDD
VLTFGNFFGAGVVLATALIHMIMPAIENLTNPCLGAAAEVYEALPLLIVL
VSILAMQALEFVLALHLRRGAKRVPMGAGDALPAAMATAAAAPAAGSVQE
RRHHHQHGMDLGDKNARLTVTVLLFEMGVALHSVIIGVSLGVVSGDSFAT
LLAALVFHQFFEGFALGSAVAQTDPTLCTTVTTIAAFALSAPVGTAIGIG
VRSSFNENATATLWLLGVFEAISGGILIYTGLVELITYGLTLNPRFTGKD
ARACSMAAAFAGMYMGAAAMSIIGKWA*
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mRNA from alignment at Contig_2:976813..978374+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_639 ID=mRNA_639|Name=jgi.p|Trimin1|157087|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1562bp|location=Sequence derived from alignment at Contig_2:976813..978374+ (Tribonema minus UTEX_B_3156 )
ATGGCTGACGAGTGCGCCTCCGAAGAACTGGATTCCTACAGCGTGTCAGC
CCATGTGGGAGCCCTGTTTATCGTCTTGGCTTGCGGAGGCCTGGGGGCCA
CTCTGCCAGCCATCAGCCATCACGTCCCTAGGCTCAGGCCGCAGGACGAC
GTGCTCACCTTTGGCAACTTTTTCGGGGCAGGTGCGTCCGATGTGCCGTG
CTCGCGACGCTCGCGCCTTCTCGCAAACGCACGCTGCACCACGCACCGCC
GGCATGAGGTCACCCCTCGGCGAGCGCCCTCGGCCCGGCACGGCGGCGTG
CGCTGATCACGCTTGCCCATTTCAGCCGCATCCCCCACCACCGTACGCCC
ATCATAACCGCCACCGCTCCCCTCGCCGCGCACGCAGGCGTGGTGCTGGC
GACGGCCCTCATCCACATGATAATGCCGGCCATCGAAAACCTGACCAACC
CATGCCTGGGCGCCGCGGCCGAGGTGTACGAGGCGCTGCCGCTGCTCATC
GTCTTGGTCTCCATCCTCGCTATGCAAGCGCTGGAGTTCGTCTTGGCGCT
GCACCTGCGCCGCGGCGCCAAGCGCGTGCCCATGGGCGCCGGCGACGCGC
TGCCCGCCGCCATGGCCACGGCCGCCGCGGCGCCGGCGGTGGCAGCGCTG
AGCGGCGGCGGGGGCAGCACGGCGATTGATGAGGCGGGCAGTGTGCAGGA
GCGGCGCCACCACCACCAGCACGGGATGGACCTGGGCGACAAGAATGCAC
GCTTGACGGTGACCGTGCTGCTGTTTGAGATGGGCGTGGCGCTGCACAGC
GTGATCATCGGGGTGTCGCTGGGCGTCGTCAGCGGCGACAGCTTCGCCAC
GCTGCTCGCGGCGCTGGTTTTCCACCAGTTCTTTGAGGTGAGCCCCCTCC
CCTGCCACTCCCCCCCTTTCCCTTCGCCTCCCCCTCCCTCGCCCCCCCCG
CTCCCCCTCCCCCCCACACCCTAGTGGCACTGAGCTGAGTGAGGGGTATG
ATATATTGAGGCACAGGGTACATCAAAATGTGCACATGCTAATTCAGTGT
ATGCACAAGCGGTCAGTGCCACGCTGAGGGCGGGGCGCGTTATGTCAAGG
CCTGCGGTGCTATGATGCGCGTGTATCAAGGCCCTGCTGCACTGTAGTTA
TGATAGTATCTGACCATCTGACATTCGGTGTCCCACATCTGCTGTCCGCA
CCAACGGCGCGCAGGGCTTCGCGCTGGGCTCCGCGGTCGCGCAGACAGAC
CCGACACTGTGCACCACCGTCACCACCATCGCCGCCTTCGCGCTGTCAGC
GCCAGTCGGCACGGCCATCGGCATTGGCGTGCGCTCGTCCTTTAACGAGA
ACGCGACGGCGACGCTGTGGCTGCTGGGCGTGTTTGAGGCCATCAGCGGC
GGCATACTCATCTACACGGGCCTCGTGGAGCTCATCACGTATGGGCTGAC
GCTCAACCCGCGCTTCACGGGCAAGGACGCGCGCGCCTGCAGCATGGCCG
CCGCCTTCGCCGGCATGTACATGGGTGCCGCGGCCATGTCCATCATTGGG
AAGTGGGCATGA
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Coding sequence (CDS) from alignment at Contig_2:976813..978374+

>mRNA_639 ID=mRNA_639|Name=jgi.p|Trimin1|157087|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=984bp|location=Sequence derived from alignment at Contig_2:976813..978374+ (Tribonema minus UTEX_B_3156 )
ATGGCTGACGAGTGCGCCTCCGAAGAACTGGATTCCTACAGCGTGTCAGC
CCATGTGGGAGCCCTGTTTATCGTCTTGGCTTGCGGAGGCCTGGGGGCCA
CTCTGCCAGCCATCAGCCATCACGTCCCTAGGCTCAGGCCGCAGGACGAC
GTGCTCACCTTTGGCAACTTTTTCGGGGCAGGCGTGGTGCTGGCGACGGC
CCTCATCCACATGATAATGCCGGCCATCGAAAACCTGACCAACCCATGCC
TGGGCGCCGCGGCCGAGGTGTACGAGGCGCTGCCGCTGCTCATCGTCTTG
GTCTCCATCCTCGCTATGCAAGCGCTGGAGTTCGTCTTGGCGCTGCACCT
GCGCCGCGGCGCCAAGCGCGTGCCCATGGGCGCCGGCGACGCGCTGCCCG
CCGCCATGGCCACGGCCGCCGCGGCGCCGGCGGCGGGCAGTGTGCAGGAG
CGGCGCCACCACCACCAGCACGGGATGGACCTGGGCGACAAGAATGCACG
CTTGACGGTGACCGTGCTGCTGTTTGAGATGGGCGTGGCGCTGCACAGCG
TGATCATCGGGGTGTCGCTGGGCGTCGTCAGCGGCGACAGCTTCGCCACG
CTGCTCGCGGCGCTGGTTTTCCACCAGTTCTTTGAGGGCTTCGCGCTGGG
CTCCGCGGTCGCGCAGACAGACCCGACACTGTGCACCACCGTCACCACCA
TCGCCGCCTTCGCGCTGTCAGCGCCAGTCGGCACGGCCATCGGCATTGGC
GTGCGCTCGTCCTTTAACGAGAACGCGACGGCGACGCTGTGGCTGCTGGG
CGTGTTTGAGGCCATCAGCGGCGGCATACTCATCTACACGGGCCTCGTGG
AGCTCATCACGTATGGGCTGACGCTCAACCCGCGCTTCACGGGCAAGGAC
GCGCGCGCCTGCAGCATGGCCGCCGCCTTCGCCGGCATGTACATGGGTGC
CGCGGCCATGTCCATCATTGGGAAGTGGGCATGA
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