mRNA_626 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: A0A836CIB0_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB0_9STRA) HSP 1 Score: 1514 bits (3921), Expect = 0.000e+0 Identity = 783/783 (100.00%), Postives = 783/783 (100.00%), Query Frame = 1 Query: 1 MLGNARHDNGQRDCSGCARQGRTWRSTGQAAAATFAWYCLLASVPCRGQQTGDEGLHAHSGHDAIAGTPERESLQQLSLVDVEATLYSRAKQDFQGDQEAFQDAVRFTRAHAQSASALAPAAPHLACVRYGAGRAFSSAAAAAGLPHDVVSNDETAGSACLLLHCTADSLEALLATERCRGWACRGGALPANLKISPALLHFASDQHDGATHLRHTQNFKRPDRPPGHLEHRGLRLNMQAGAPARXXXXXXXXXXARGAIGLKVTMARGSPLASADADAAAAAYGALLQEWRREWGALTSRGAIRGLSWHSEGGAHAAAQRQRPGRTPEAREHADTITELMDHVADLVSQAAGGPRSAADVCGWHALPLVHARADGSVHVGAAHALRGGGSSGGGGTMRDVACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVAPSAAAADAGELLGTCPAPATRLCTGECLSDADCAAVGLLSPCARNARDALFNRYFNCPRLGCDGNFTAVLSSWYDAPPCGEDARALVPRAGGAAPAAKLAFFDLGRSDYFTDERVSFAEVLDALLRAGAKVSAAXXXXXXXXXAAGRVMTARWRFLSCSRAPRTTIVYGLDAEASCTSASVVGGAGRTWCAAPPPPCARLTPTNSHAEAEPNCSGPHPVACAHCRWCCRASARLCSHQPSPLPPARR 2349 MLGNARHDNGQRDCSGCARQGRTWRSTGQAAAATFAWYCLLASVPCRGQQTGDEGLHAHSGHDAIAGTPERESLQQLSLVDVEATLYSRAKQDFQGDQEAFQDAVRFTRAHAQSASALAPAAPHLACVRYGAGRAFSSAAAAAGLPHDVVSNDETAGSACLLLHCTADSLEALLATERCRGWACRGGALPANLKISPALLHFASDQHDGATHLRHTQNFKRPDRPPGHLEHRGLRLNMQAGAPARXXXXXXXXXXARGAIGLKVTMARGSPLASADADAAAAAYGALLQEWRREWGALTSRGAIRGLSWHSEGGAHAAAQRQRPGRTPEAREHADTITELMDHVADLVSQAAGGPRSAADVCGWHALPLVHARADGSVHVGAAHALRGGGSSGGGGTMRDVACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVAPSAAAADAGELLGTCPAPATRLCTGECLSDADCAAVGLLSPCARNARDALFNRYFNCPRLGCDGNFTAVLSSWYDAPPCGEDARALVPRAGGAAPAAKLAFFDLGRSDYFTDERVSFAEVLDALLRAGAKVSAAXXXXXXXXXAAGRVMTARWRFLSCSRAPRTTIVYGLDAEASCTSASVVGGAGRTWCAAPPPPCARLTPTNSHAEAEPNCSGPHPVACAHCRWCCRASARLCSHQPSPLPPARR Sbjct: 1 MLGNARHDNGQRDCSGCARQGRTWRSTGQAAAATFAWYCLLASVPCRGQQTGDEGLHAHSGHDAIAGTPERESLQQLSLVDVEATLYSRAKQDFQGDQEAFQDAVRFTRAHAQSASALAPAAPHLACVRYGAGRAFSSAAAAAGLPHDVVSNDETAGSACLLLHCTADSLEALLATERCRGWACRGGALPANLKISPALLHFASDQHDGATHLRHTQNFKRPDRPPGHLEHRGLRLNMQAGAPARXXXXXXXXXXARGAIGLKVTMARGSPLASADADAAAAAYGALLQEWRREWGALTSRGAIRGLSWHSEGGAHAAAQRQRPGRTPEAREHADTITELMDHVADLVSQAAGGPRSAADVCGWHALPLVHARADGSVHVGAAHALRGGGSSGGGGTMRDVACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVAPSAAAADAGELLGTCPAPATRLCTGECLSDADCAAVGLLSPCARNARDALFNRYFNCPRLGCDGNFTAVLSSWYDAPPCGEDARALVPRAGGAAPAAKLAFFDLGRSDYFTDERVSFAEVLDALLRAGAKVSAAXXXXXXXXXAAGRVMTARWRFLSCSRAPRTTIVYGLDAEASCTSASVVGGAGRTWCAAPPPPCARLTPTNSHAEAEPNCSGPHPVACAHCRWCCRASARLCSHQPSPLPPARR 783
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: A0A836CH33_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH33_9STRA) HSP 1 Score: 246 bits (628), Expect = 9.360e-65 Identity = 147/315 (46.67%), Postives = 175/315 (55.56%), Query Frame = 1 Query: 1195 RDVACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHG-----------AKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVAPS----------------------------------AAAADAGELLGTCPAPATRLCTGECLSDADCAAVGLLSPCARNARDALFNRYFNCPRLGCDGNFTAVLSSWYDAPPCGEDARALVPRAGGAAPAAKLAFFDLGRSDYFTDERVSFAEVLDALLRAGAKVS 2004 R AC Y L+AFLARR EV H+ PLH ND+A AV+QSG+ AK LW AGL G GQV+G+SDTGLDDASCFFRDD RG TPRG WP D GV + ++RKVIQYL D D YRGHGTHVA S +GA+ + AAA A L C A A CTGEC++DADCAA+GL +PC N D F+ NC R GCDG+F+ + PPCG DA +P A GAAP A+LAF D+G + +S ++LDA L AGAKVS Sbjct: 420 RLAACAYGLIAFLARRPEVLHVVPLHRPRLHNDLATAVLQSGSXXXXXXXXXXXXXXXXXXAKALWEAGLTGEGQVLGISDTGLDDASCFFRDDERGATPRGAWPNDTGVVHLDRRKVIQYLVAPSADGTDYYRGHGTHVARSPLGAMHHTNNFTHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAPATPLPPVCAAGALLTCTGECMTDADCAALGLSTPCTANVGDEYFDNMLNCARFGCDGDFSLYTTP--QRPPCGVDAAEALPAASGAAPGARLAFIDIGDDFGELLDTMSVRDILDAALAAGAKVS 732
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: A0A835YSQ6_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSQ6_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.030e-27 Identity = 131/383 (34.20%), Postives = 172/383 (44.91%), Query Frame = 1 Query: 1039 LVSQAAGGPR---SAADVCGWHALPLVHARADGSVHVGAAHA-LRGGGSSGGGGTMRDVACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQ------VIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVAPSAAAADAGELLGTCPAPATRLCTGECLSDADCAA-----VGLLSPC--------------------------------------------ARNARDALFNRYFNCPRLGCDGNFTAVLSSWYDAPPCGEDARALVPRAGGAAPAAKLAFFDL--GRSDYFTDERVSFAEVLDAL-LRAGAKV 2001 LV++AA AA CGW A+ + R DG +H+G A LRGG S G C LL +L+ + +VA I+ A+ RN V + Q GA A G +PLW G+ G GQ V+G+ DTG+DDASC+F+D AR + RG V T QRKV+QYL T+ D D + GHGTH AGS GA+ AA C A + C GEC++DA C + LL PC AR ++ A F CP GC DA CG DA + +AGG AP AKLA D+ G +D D + A+ DA ++AGA++ Sbjct: 129 LVAEAAAALERELDAAAACGWSAVTVTSTR-DGVLHLGGLQAVLRGGLPSATEGMSP---CFMVLLTYLSAQHDVAFISHRGAITPRNYVGTQLTQGGA----AAGERPLWDRGITGAGQASACQTVVGLVDTGVDDASCYFKDPARAQVTRGTIASPV--TDMAQRKVVQYLITS--DGTDTWGGHGTHTAGSIAGALYGGWAAPP------PCGAGTLQSCWGECMTDAMCRQDTLLLLLLLRPCEVLDGVARSLRSTRCCATQAESSSEVAWQWSEDTISDDADAWTCARASQQAAQKWPFMCPAYGCGAA---------DASTCGADAATVRNQAGGNAPGAKLAVLDVAYGAADSL-DVPDALADAFDAARVQAGARI 483
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: A0A4D9D243_9STRA (Subtilisin n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D243_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.100e-27 Identity = 94/241 (39.00%), Postives = 122/241 (50.62%), Query Frame = 1 Query: 1204 ACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVAPSAAAADAGELLGTCPAPATRLCTGECLSDADCAA--VGLLSPCARNARDALFNRYFNCPRLGCDGNFTAVLSSWYDAPPCGEDARALVPRAGGAAPAAKLAFFDL 1920 AC L+AF+A ++ I A +ND A ++QSG D A H A+PLW GL G G++IGV+DTGLDD SCFF D+A G+ R W + T QRKV+QY+ + D D GHGTHV+GS G V P + G C T CTG CLS C G +S C +D + +F CP GCDG L+ C + + G A AK+AFFD+ Sbjct: 95 ACLEGLVAFIASHPDILSIQTRATYALQNDQATWIIQSG--DEATH-ARPLWDLGLTGKGELIGVADTGLDDESCFFYDNALGQVARSSW--EAPFTDMTQRKVVQYV--SFVDGGDLVEGHGTHVSGSLAGVVEPR----NEGRRGHVCAEGETLACTGMCLSAPTCQLKEYGYVS-CQDWLQDGHCDAWFACPLYGCDGGDCVGLA-------CNPNPEEALMANQGMAREAKIAFFDI 316
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: W7TM23_9STRA (Subtilisin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM23_9STRA) HSP 1 Score: 129 bits (325), Expect = 5.600e-27 Identity = 94/241 (39.00%), Postives = 122/241 (50.62%), Query Frame = 1 Query: 1204 ACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVAPSAAAADAGELLGTCPAPATRLCTGECLSDADCAA--VGLLSPCARNARDALFNRYFNCPRLGCDGNFTAVLSSWYDAPPCGEDARALVPRAGGAAPAAKLAFFDL 1920 AC L+AF+A ++ I A +ND A ++QSG D A H A+PLW GL G G++IGV+DTGLDD SCFF D+A G+ R W + T QRKV+QY+ + D D GHGTHV+GS G V P + G C T CTG CLS C G +S C +D + +F CP GCDG L+ C + + G A AK+AFFD+ Sbjct: 422 ACLEGLVAFIASHPDILSIQTRARYALQNDQATWIIQSG--DEATH-ARPLWDLGLTGKGELIGVADTGLDDESCFFYDNALGQVARSSW--EAPFTDMTQRKVVQYV--SFVDGGDLVEGHGTHVSGSLAGVVEPR----NEGRRGHFCAEGETLACTGMCLSAPTCQLKDYGYVS-CQDWLQDGHCDAWFACPLYGCDGGDCVGLA-------CNPNPEEALMANQGMAREAKIAFFDI 643
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: D7FTQ1_ECTSI (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTQ1_ECTSI) HSP 1 Score: 113 bits (283), Expect = 6.010e-22 Identity = 97/271 (35.79%), Postives = 129/271 (47.60%), Query Frame = 1 Query: 1198 DVACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYL-HTNVTDIYDAYRGHGTHVAGSAVGAVAPSAAAADAGELLGTCPAPATRL--CTGECLSDADCAAVGLLSPCARNARDALFNRYFNCPRLGCDGNFTAVLSSWYDAPPCGEDARALVPRAGGAAPAAKLAFFDLGRSDYFTDERVSFAEVLDALLRAGAKV 2001 AC L+ FL+ + EV HI P N V A ++ G P+ AGL G GQVIGV+DTGLDD+SCFF+D+ G PR + YP+QRKVIQY+ + TD GHGTHVAG A G V A G++ A + C G+C++ G + +N +CP CD + + + YD P C ED +P A G A A+LAFFD+G D ++ DA AGA+V Sbjct: 436 SAACFIGLVGFLSAQPEVMHIHPEPRAEANNKVLTAYIEGGEPT-----ETPMRVAGLTGAGQVIGVTDTGLDDSSCFFKDE-EGSVPRTTMA--LAEYYPDQRKVIQYVVFADDTDT----DGHGTHVAGIAAGKVYDDWEEAWVGDVSKEVCDDAGLIMSCFGDCVA-------GTMGGSCH------WNPELSCPMSDCDEDVSCDDYTQYDFP-CFEDPVDELPEASGVASDAQLAFFDIGNEDGGLVIPDDIGDMWDAQYAAGARV 680
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 106 bits (264), Expect = 7.910e-20 Identity = 105/304 (34.54%), Postives = 134/304 (44.08%), Query Frame = 1 Query: 1033 ADLVSQ-AAGGPRSAADVCGWHALPLVHARADGSVHVGAAHALR---GGGSSGGGGTMRDVACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVAPSAAAADAGELLGTCPAPATRLCTGECLSDADCAAVG----LLSPCARNARDALFNRYFNCPRLGCDGNFTAVLSSWYDAPPCGEDARALVPRAGGAAPAAKLAFFDL 1920 A LV Q A G S D+C W ++ + +A D + G H L G S T VAC L++FL+ R EV ++P HA N VA+ ++QS A PL AGL G GQVI V DTGLD+ SCFF DD P G + + +G P + D GHGTH AGSA+GA + A E TC C G C+ DAD + G L P + D +R CP + CD S +D + GG A AKLAFFD+ Sbjct: 253 ATLVHQLAVAGRTSPGDICSWDSISMHYAGNDLLLVSGLDHLLHKENGAIGSDEEATELRVACFMGLVSFLSNRLEVLRVSPRHADRLLNAVARTIIQSATITEA-----PLTDAGLDGTGQVIQVIDTGLDETSCFFIDDDGEEVPHGHYYEALGEIIPSS-----------SSARDDVEGHGTHCAGSALGATIRTPA-----ETPTTCSGTEVPGCVGGCI-DADRTSWGDDLFTLMP-EYSPYDIDIDRL--CPMIDCDDATDPRCLS--------DDVGQTLADHGGMAQGAKLAFFDV 523
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: A0A7R9VHG5_9STRA (Subtilisin (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VHG5_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.210e-14 Identity = 58/137 (42.34%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 1198 DVACTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVA 1608 DVAC L+ + +V + ND A ++VQ+G AA AKP W AGL G+GQV+ VSDTGLD C F D G TP G T +RKV+QY+ D D GHGTHVAG+ G VA Sbjct: 240 DVACVLGLMFGVTLLPQVCSMELTKKTNAFNDQAGSIVQTGGNGKAASNAKPFWDAGLTGNGQVVAVSDTGLDFDHCHFWDAQPGWTPNGR-------TDTTRRKVVQYVP--FVDALDEQSGHGTHVAGTIAGRVA 367
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: A0A7S2PJJ5_9STRA (Subtilisin (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PJJ5_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 9.210e-14 Identity = 50/131 (38.17%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 1207 CTYALLAFLARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGVTYPEQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVG 1599 C +L+A L+ EV + + ++ ND+AQ + QSG + +P W GL G GQ++ VSDTGLD C F D + G G P++RKVI Y D D+ GHGTHV GS VG Sbjct: 5 CVLSLIASLSAAPEVCSVDAVPEVSTMNDIAQWITQSGVDN-----YRPFWDKGLTGSGQIVQVSDTGLDTNHCSFWDSSPGELRDGT-------IQPDRRKVILY-EAYANDAEDSNDGHGTHVTGSIVG 122
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Match: A0A835Z5P2_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P2_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.270e-13 Identity = 59/144 (40.97%), Postives = 76/144 (52.78%), Query Frame = 1 Query: 1234 ARRSEVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPRGLWPQDVGV-----TYP----EQRKVIQYLHTNVTDIYDAYRGHGTHVAGSAVGAVAPSAAAADAGE 1638 A R +V ++ L AL N VA + QS R GA PLWSAGLRG G+VI +SD+G+D ASCFF ++ R V T P +RK++QY+ D DA GHGTHVAG+ GA A + A G+ Sbjct: 288 AARGDVLYVDALPALRAHNTVAAWIAQSARR-----GATPLWSAGLRGGGEVIAISDSGVDAASCFFTEEPRXXXXXXXXXXXXAVQCSNFTSPVTDLRRRKIVQYV--GFADCADAPGGHGTHVAGTLAGAQAGATAGRHLGD 424 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157122 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_626 ID=mRNA_626|Name=jgi.p|Trimin1|157122|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2352bp|location=Sequence derived from alignment at Contig_2:866975..871279- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTCGGCAATGCACGCCACGACAATGGGCAGCGAGACTGTAGCGGCTGback to top protein sequence of jgi.p|Trimin1|157122 >Trimin1|157122|e_gw1.2.175.1 ID=Trimin1|157122|e_gw1.2.175.1|Name=jgi.p|Trimin1|157122|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=784bp MLGNARHDNGQRDCSGCARQGRTWRSTGQAAAATFAWYCLLASVPCRGQQback to top mRNA from alignment at Contig_2:866975..871279- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_626 ID=mRNA_626|Name=jgi.p|Trimin1|157122|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4305bp|location=Sequence derived from alignment at Contig_2:866975..871279- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:866975..871279- >mRNA_626 ID=mRNA_626|Name=jgi.p|Trimin1|157122|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2352bp|location=Sequence derived from alignment at Contig_2:866975..871279- (Tribonema minus UTEX_B_3156 )back to top |