mRNA_6204 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|167006
Unique NamemRNA_6204
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: A0A836CC41_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC41_9STRA)

HSP 1 Score: 617 bits (1590), Expect = 1.910e-223
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1
Query:    1 MRGNVLEKISDDISKELGVPFKASFSSRGSGGGSGASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVMNMA 897
            MRGNVLEKISDDISKELGVPFKASFSSRGSGGGSGASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVMNMA
Sbjct:    1 MRGNVLEKISDDISKELGVPFKASFSSRGSGGGSGASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVMNMA 299          
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: A0A4D9CLL2_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLL2_9STRA)

HSP 1 Score: 302 bits (773), Expect = 6.020e-99
Identity = 161/301 (53.49%), Postives = 201/301 (66.78%), Query Frame = 1
Query:   13 VLEKISDDISKELGVPFKASF----SSRGSGGGSGASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQA-KELREKVKAVLSEADVKP--SLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVMNM 894
            +LE +S  I + L    KA+        G  GG GA+ G   D+   G K+F KS  +   DML AEY G+K MY+T TIRVP P+  G    Q++ VFEYLAMG +RG ++A  MGR LA+MH   SK G+FG+ IDNTIGATPQPNGW  SW EFWDE+RLGHML+LC ++G  + Q  +ELR KVK +LSE    P  SL+HGDLWTGN   T +G  CIFDPA YYG  E DLAM+ LFGSL   FY  Y +  P +PGHE+RKV+YN+YH+LNH VLFGGGY   A  M+++++ M
Sbjct:   13 LLEAMSQAIGQALHNNAKATVLEPTGGGGFAGGGGANTGVAEDTK-VGEKYFYKSTGSWGLDMLLAEYKGIKAMYDTHTIRVPTPVAVGTSDAQAFVVFEYLAMGGTRG-DAAGRMGRELAQMHRHTSKNGQFGWDIDNTIGATPQPNGWQASWVEFWDEKRLGHMLKLCRREGHDFGQVERELRAKVKQILSEDGYSPAPSLLHGDLWTGNVAATGEGVPCIFDPAVYYGDREADLAMTTLFGSLAPAFYTAYMDEWPLEPGHEKRKVVYNLYHILNHIVLFGGGYRSQAQRMIDQILKM 311          
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: A0A7S2XYV3_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYV3_9STRA)

HSP 1 Score: 302 bits (774), Expect = 2.080e-98
Identity = 154/298 (51.68%), Postives = 200/298 (67.11%), Query Frame = 1
Query:    1 MRGNVLEKISDDISKELG-VPFKASFSSRGSGGGSGASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVMN 891
            M+ ++ E +S  +++  G V  +   +  G GG  GA+VGT+ D+A +G ++F KSG  A FDMLRAEY+G+K M++T TIRVP PIC G     S+ VFE+L MG   G       GR LA MH   S  G+FGF I NT GATPQPN W  +W EFWD  RLGHML L ++ GA +P  + LR+KV  +LS  +  PSLVHGDLW+GN  YT +G+  IFDPATYYG  EVD+AM+ LFGS    +Y  Y +  P QPG EQRKVIYN+YH+LNH+VLFGGGY   A +M++K+++
Sbjct:   66 MQASMFEVMSKSVAEATGQVSVQLKSAGSGFGGXXGAAVGTVEDAA-TGKRYFYKSGSLAQFDMLRAEYMGVKAMHDTHTIRVPEPICIGTADYNSFVVFEHLPMG---GHGDPARAGRELAAMHRNLSPNGQFGFDISNTCGATPQPNPWTPTWAEFWDRHRLGHMLSLAKRDGAVFPDEERLRKKVYDILSAHNPVPSLVHGDLWSGNQAYTKNGDPVIFDPATYYGDREVDIAMTYLFGSQASSYYQAYEQEWPLQPGFEQRKVIYNLYHILNHFVLFGGGYLSQANSMIHKILS 359          
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: W7T795_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T795_9STRA)

HSP 1 Score: 299 bits (766), Expect = 2.180e-96
Identity = 161/301 (53.49%), Postives = 199/301 (66.11%), Query Frame = 1
Query:   13 VLEKISDDISKELGVPFKASF----SSRGSGGGSGASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQA-KELREKVKAVLSEADVKP--SLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVMNM 894
            +LE +S  I + L    KA+        G  GG GA+ G   D    G K+F KS  +   DML AEY G K MY+T TIRVP P+  G    Q++ VFEYLAMG +RG ++A  MGR LA+MH   SK G+FG+ IDNTIGATPQPNGW  SW EFWDE+RLGHML+LC ++G  + Q  +ELR KVK +LSE    P  SL+HGDLWTGN   T +G  CIFDPA YYG  E DLAM+ LFGSL   FY  Y E  P +PG+E+RKV+YN+YH+LNH VLFGGGY   A  M+++++ M
Sbjct:  122 LLEAMSQAIGQALHNDAKATVLEPTGGGGFAGGGGANTGVAEDRK-VGEKYFYKSTGSWGLDMLLAEYKGTKAMYDTHTIRVPTPVAVGTSDAQAFVVFEYLAMGGTRG-DAAGRMGRELAQMHRHTSKNGQFGWDIDNTIGATPQPNGWQASWVEFWDEKRLGHMLKLCRREGHDFGQVERELRAKVKQILSEDGYSPAPSLLHGDLWTGNVAATGEGVPCIFDPAVYYGDREADLAMTALFGSLAPAFYTAYMEEWPLEPGYEKRKVVYNLYHILNHIVLFGGGYRSQAQRMIDQILKM 420          
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: A0A6S9K0R7_HETAK (Protein-ribulosamine 3-kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K0R7_HETAK)

HSP 1 Score: 295 bits (755), Expect = 6.770e-96
Identity = 149/296 (50.34%), Postives = 196/296 (66.22%), Query Frame = 1
Query:    1 MRGNVLEKISDDISKELGVPFKASFSSRGSGGGSGASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVM 888
            M+ ++L  + +   KE G+         G GGG GA+VG + D A +G ++F KS     ++ML AEY GL+ M ET TI+VP PI  G   N ++A+FEYL  G   G  S ++M   LA MH C S  G++GFHIDNT GATPQ N W  +W +F+  RRL H+L+L E+ GA +P  +EL +KVKA+L + +  PSLVHGDLW+GN G+ ADG   IFDPATYYG  EVDLAMS LFG+  G FYA Y    P +PG EQRK +YN+YH+LNH+VLFGGGY G A  M+++++
Sbjct:   43 MKSDLLTSM-EQAMKERGIEVDLETGGSGFGGGGGAAVGNVVDKA-TGTRYFTKSTGLQGYNMLNAEYEGLRAMAETNTIKVPTPIAKGTSANNAFAIFEYLNFG---GGGSMKQMAEDLAAMHRCTSPDGRYGFHIDNTCGATPQDNTWEATWADFYARRRLDHILKLSERDGAHFPNRQELLDKVKAILQDHNAPPSLVHGDLWSGNKGF-ADGRPAIFDPATYYGDREVDLAMSYLFGNFGGEFYAAYEAAYPLEPGFEQRKTVYNLYHILNHFVLFGGGYLGQAQGMIDRIL 332          
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: D8LBJ1_ECTSI (Protein-ribulosamine 3-kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ1_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 6.620e-92
Identity = 139/264 (52.65%), Postives = 181/264 (68.56%), Query Frame = 1
Query:  106 ASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTA-DGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVMNM 894
            ASVGTI D   +G K+F K    +   ML AE  GL+ MYE + IRVPRPIC G      +A+FE+L MG    +E A  MG  LA+MH   S  GK+GFH+DNTIGAT QPNGWMDSW +FW ERRL HM+RL E++G  +    ++ EK +++L++ +V+P LVHGDLW GN G+ A + +  IFDPATYYG  EVDL M+ +FG  P  FY GY +  P   GH++R+V+YN+YH+LNH+VLFGGGY G A  MM +++NM
Sbjct:   33 ASVGTIDDLE-TGDKYFYKKAGPSGASMLEAERAGLQAMYEAKAIRVPRPICGGDRPGGCFAIFEHLNMGGRASSERAELMGAQLAQMHRSLSPNGKYGFHVDNTIGATAQPNGWMDSWADFWVERRLLHMIRLSEREGGVFQNVDKVVEKTRSILAKHEVQPCLVHGDLWGGNQGFVAPESDPVIFDPATYYGDREVDLGMTHVFGGFPPAFYRGYEKEWPLPEGHQERQVVYNVYHILNHHVLFGGGYLGQAQRMMGQILNM 295          
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: A0A1Z4LZZ6_9CYAN (Uncharacterized protein n=1 Tax=Calothrix parasitica NIES-267 TaxID=1973488 RepID=A0A1Z4LZZ6_9CYAN)

HSP 1 Score: 267 bits (683), Expect = 1.160e-85
Identity = 126/246 (51.22%), Postives = 170/246 (69.11%), Query Frame = 1
Query:  151 FFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVM 888
            +F K   A+   M  AE LG+++MY+T TIRVP+P+C G+ GN  Y V E+L MG    + S  EMGR LA+MH   S +  FG+ ++NTIG+TPQ N W D W EFW   RLG+  +L +++G  +PQA EL + +  +L+   V PSLVHGDLW GNAG+T +GE  IFDPATYYG  EVD+AM+E+FG  PG FY GY++V P   G+E+RK +YN+YH+LNH+ LFGGGY   A  M+N+++
Sbjct:   43 YFVKLNQASQVSMFEAEALGVQQMYDTSTIRVPKPVCYGVAGNSCYIVLEWLEMGRGN-STSFEEMGRKLAQMHQ-KSLSKSFGWEMNNTIGSTPQINTWTDDWVEFWTNHRLGYQFQLGKRRGGSFPQADELLKAIPELLAGHQVNPSLVHGDLWGGNAGFTVEGEPIIFDPATYYGDREVDIAMTEVFGGFPGSFYQGYNKVFPLDDGYERRKTLYNLYHILNHFNLFGGGYASQANGMINRIL 286          
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: A0A0V8A0J1_9CYAN (Uncharacterized protein n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V8A0J1_9CYAN)

HSP 1 Score: 267 bits (682), Expect = 1.870e-85
Identity = 128/249 (51.41%), Postives = 174/249 (69.88%), Query Frame = 1
Query:  151 FFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTG---KFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVM 888
            +F K   AA   M  AE LGLKE+Y+  TIRVP+PIC+G+ GN  Y V E+L+MG     +S  EMG+ LA MH  H  TG   KFG++I+NTIGATPQ N W  +W EF+ + RL +   L +++G+ +PQA++L   +  +LS   V+PSLVHGDLW GNAG+T DGE  IFDPATYY   EVD+AM+ELFG  P  FY GY++V P   G+E+RK++YN+YH++NH+ LFG GY G A +M+++++
Sbjct:   43 YFVKMNRAAKLAMFEAEALGLKEIYDVGTIRVPKPICSGVSGNSCYLVMEWLSMGKGN-PKSWEEMGQRLAAMHKYHLSTGREKKFGWNINNTIGATPQINTWTQNWVEFYVKNRLAYQFELAKRRGSHFPQAQQLLNAIPKLLSGHQVQPSLVHGDLWGGNAGFTEDGEPVIFDPATYYADREVDIAMTELFGGFPAAFYRGYNKVFPLNKGYEKRKILYNLYHIINHFNLFGSGYVGQANSMISRIL 290          
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: K9YG67_HALP7 (Fructosamine/Ketosamine-3-kinase n=1 Tax=Halothece sp. (strain PCC 7418) TaxID=65093 RepID=K9YG67_HALP7)

HSP 1 Score: 265 bits (678), Expect = 7.060e-85
Identity = 136/289 (47.06%), Postives = 187/289 (64.71%), Query Frame = 1
Query:   22 KISDDISKELGVPFKASFSSRGSGGGSGASVGTITDSAGSGHKFFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVM 888
            +I+ +IS+  G PF+     R  GGGS      ITD       +F K   A++++M  AE +GLKEMY+T TIR+P+PIC G   N +Y V E+L  G   G++    MG  LA+MH       +FG+H +NTIG+TPQ N WMD+W +F+ E R+G+ +RL +++G  YP  K++ EKV+ VL++   +PSLVHGDLW GNA  T +GE  I DPATYYG  EVD+AMSELFG  P  FY GY+       G++QRK +YN+YH+LNH+ LFGGGY   A  M++++M
Sbjct:    4 EIAKEISQATGKPFEIK-DRRSVGGGSINQSYAITDGT---ETYFLKFNSASEYEMFAAEAVGLKEMYDTHTIRIPQPICWGTTDNAAYIVMEWLEFGRGGGSQVWEAMGEQLAEMHR-KGVAEQFGWHRNNTIGSTPQINTWMDNWADFFAEHRIGYQVRLAKRRGGNYPDTKKVVEKVREVLADHHPQPSLVHGDLWGGNAAVTKEGEPVILDPATYYGDREVDIAMSELFGGFPAAFYQGYNAAWELDAGYKQRKDLYNLYHILNHFNLFGGGYGSQASRMIDRLM 287          
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Match: A0ZH86_NODSP (Fructosamine kinase family protein, At3g61080-like protein n=7 Tax=Nodularia TaxID=159191 RepID=A0ZH86_NODSP)

HSP 1 Score: 264 bits (675), Expect = 1.880e-84
Identity = 129/246 (52.44%), Postives = 165/246 (67.07%), Query Frame = 1
Query:  151 FFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFEYLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGWMDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSLVHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAGYHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVM 888
            +F K   A+   M  AE LGLKEM  T TI VP+PIC G  GN SY V E+L MG S  ++S +EMGR LA+MH   S  G FG+ I+NTIG+TPQ N W   W EF+ + RL +  +L  ++G  +P+ ++L   +  +L+   V+PSLVHGDLW GNAGYT  GE  IFDPATY+G  EVD+AM+ELFG    GFY GYHEV P   G+EQRK +YN+YH+LNH+ LFGGGY   A  M+ K++
Sbjct:   43 YFVKLNQASQVAMFEAEALGLKEMLATNTILVPKPICWGTAGNSSYIVLEWLEMGGSN-SKSCQEMGRKLAQMHKATSNKG-FGWQINNTIGSTPQINTWTADWAEFYTQHRLSYQFQLARRRGGSFPKQEQLLAAIPELLANHQVQPSLVHGDLWGGNAGYTVSGEPVIFDPATYFGDREVDIAMTELFGGFSAGFYQGYHEVFPLNAGYEQRKTLYNLYHILNHFNLFGGGYASQANGMIEKIL 286          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167006 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CC41_9STRA1.910e-223100.00Protein-ribulosamine 3-kinase n=1 Tax=Tribonema mi... [more]
A0A4D9CLL2_9STRA6.020e-9953.49Protein-ribulosamine 3-kinase n=1 Tax=Nannochlorop... [more]
A0A7S2XYV3_9STRA2.080e-9851.68Protein-ribulosamine 3-kinase n=1 Tax=Fibrocapsa j... [more]
W7T795_9STRA2.180e-9653.49Protein-ribulosamine 3-kinase n=1 Tax=Nannochlorop... [more]
A0A6S9K0R7_HETAK6.770e-9650.34Protein-ribulosamine 3-kinase n=1 Tax=Heterosigma ... [more]
D8LBJ1_ECTSI6.620e-9252.65Protein-ribulosamine 3-kinase n=2 Tax=Ectocarpus T... [more]
A0A1Z4LZZ6_9CYAN1.160e-8551.22Uncharacterized protein n=1 Tax=Calothrix parasiti... [more]
A0A0V8A0J1_9CYAN1.870e-8551.41Uncharacterized protein n=1 Tax=Mastigocoleus test... [more]
K9YG67_HALP77.060e-8547.06Fructosamine/Ketosamine-3-kinase n=1 Tax=Halothece... [more]
A0ZH86_NODSP1.880e-8452.44Fructosamine kinase family protein, At3g61080-like... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:209423..213383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|167006|e_gw1.47.122.1
Descriptionprotein-ribulosamine 3-kinase activity
COG categoryG
Max annot lvl2759|Eukaryota
EggNOG OGsCOG3001@1|root,KOG3021@2759|Eukaryota
Evalue1.09e-92
Seed ortholog2880.D8LBJ1
Hectar predicted targeting categoryother localisation
TranscriptId167328
TrackFilteredModels1
ProteinId167006
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167006gene_6204Tribonema minus UTEX_B_3156 geneContig_47 209423..213383 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167006Trimin1|167006|e_gw1.47.122.1Tribonema minus UTEX_B_3156 polypeptideContig_47 209423..213383 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6204_6exon_6204_6Tribonema minus UTEX_B_3156 exonContig_47 209423..209497 -
exon_6204_5exon_6204_5Tribonema minus UTEX_B_3156 exonContig_47 209957..209974 -
exon_6204_4exon_6204_4Tribonema minus UTEX_B_3156 exonContig_47 210621..210757 -
exon_6204_3exon_6204_3Tribonema minus UTEX_B_3156 exonContig_47 211455..211644 -
exon_6204_2exon_6204_2Tribonema minus UTEX_B_3156 exonContig_47 212164..212561 -
exon_6204_1exon_6204_1Tribonema minus UTEX_B_3156 exonContig_47 213302..213383 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6204CDS_6204Tribonema minus UTEX_B_3156 CDSContig_47 213302..213383 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6204 ID=mRNA_6204|Name=jgi.p|Trimin1|167006|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=900bp|location=Sequence derived from alignment at Contig_47:209423..213383- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGAGGCAACGTGCTGGAGAAAATCAGCGATGATATTAGCAAGGAGCT
CGGTGTGCCTTTCAAGGCCAGCTTCAGCTCCAGGGGTTCCGGCGGCGGCA
GCGGCGCCTCCGTCGGCACCATCACCGACTCCGCCGGCTCCGGCCACAAG
TTCTTTTGCAAGTCGGGCGACGCCGCGGACTTCGACATGCTGCGCGCTGA
GTATCTGGGACTCAAGGAGATGTACGAGACGCGCACGATACGCGTGCCGC
GCCCCATCTGCACGGGCCTCGTGGGCAACCAGAGCTACGCGGTGTTCGAG
TACCTGGCAATGGGGGTGAGCAGGGGGGCGGAGTCCGCGCGCGAGATGGG
CCGCGGTCTCGCCAAGATGCACCTGTGCCACAGCAAAACCGGAAAGTTTG
GCTTCCATATTGACAATACCATCGGCGCGACGCCGCAGCCCAATGGCTGG
ATGGACAGCTGGCCGGAGTTCTGGGACGAGCGGCGACTGGGCCACATGCT
GCGGCTGTGCGAGCAGCAGGGGGCCAAGTACCCGCAGGCAAAGGAGCTGC
GGGAGAAGGTCAAGGCAGTGCTTAGCGAGGCTGACGTTAAGCCTTCGCTG
GTGCACGGCGATCTCTGGACGGGCAATGCGGGGTACACGGCTGATGGGGA
GGGGTGCATCTTCGATCCAGCGACCTACTACGGGCACTCCGAAGTGGATC
TGGCCATGTCAGAACTGTTTGGCTCCCTGCCCGGCGGCTTTTATGCGGGC
TACCACGAAGTGATACCGCAGCAACCCGGCCACGAACAGCGGAAAGTCAT
ATATAATATGTATCACATGCTCAATCACTACGTGCTATTCGGAGGCGGCT
ACTGGGGCAGTGCCGTGACCATGATGAACAAGGTTATGAACATGGCTTAG
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protein sequence of jgi.p|Trimin1|167006

>Trimin1|167006|e_gw1.47.122.1 ID=Trimin1|167006|e_gw1.47.122.1|Name=jgi.p|Trimin1|167006|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=300bp
MRGNVLEKISDDISKELGVPFKASFSSRGSGGGSGASVGTITDSAGSGHK
FFCKSGDAADFDMLRAEYLGLKEMYETRTIRVPRPICTGLVGNQSYAVFE
YLAMGVSRGAESAREMGRGLAKMHLCHSKTGKFGFHIDNTIGATPQPNGW
MDSWPEFWDERRLGHMLRLCEQQGAKYPQAKELREKVKAVLSEADVKPSL
VHGDLWTGNAGYTADGEGCIFDPATYYGHSEVDLAMSELFGSLPGGFYAG
YHEVIPQQPGHEQRKVIYNMYHMLNHYVLFGGGYWGSAVTMMNKVMNMA*
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mRNA from alignment at Contig_47:209423..213383-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6204 ID=mRNA_6204|Name=jgi.p|Trimin1|167006|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3961bp|location=Sequence derived from alignment at Contig_47:209423..213383- (Tribonema minus UTEX_B_3156 )
ATGCGAGGCAACGTGCTGGAGAAAATCAGCGATGATATTAGCAAGGAGCT CGGTGTGCCTTTCAAGGCCAGCTTCAGCTCCAGTGAGTGTACTCAATAGC TTGTCATGAATGAAGTAATGTACAAAAAGCGTGTGCTTGCTATCCCTACC AATAGCGCTTGTTGCCAGTGTAGGGTGCCCATTGGCCAACAAATATCACA GGATCTCGGATTCGGCGTGATGAGGGATCATGTTTGCCTAGCGGCAGCAC TTACACCATCAGAGACGAGTGCTCAGCATGCACCACAGTTATTGCAGTAA GTGGGCATCCGAATCGCACACTCAGGACGAAATGCCAGTCTTCGCCCAAA TTTCAAACTGTAGCCTATGCTCTGACCTTGTAAATCAGAGCAGCAAATAG TGTGCTCGAGGCGCCAGGTATTAGTGCCACACAATCGGCCAACGCCGTAA AATTTTCCATTGTCATTTGCAAAATGACTACATTGCACTCATACATCACC GAAAGTGTGCCAGCTGATGAACTGCTCGACGTAGGCTGTCTTCTGTACCC ACACGGGAGAGGTATGGTGAACGTATGATTTGTCCTACTCCTTTCATATC AACCTGGGCCTGTCGCGCTGCATATATACTTTGTACACTGCAGTCCTCAC ACTCTTATAAACAGTGCATGGCACCAAAACTGATCGGCACTCCCCCAGGG CTCAGAGTTGTGTCACGCATCGCACCACGTACGTGGCCAAACGCGCTTGC AAAGCAGCCTCCAACACACAGATGTCACTAACCACTGACTCTGCATCAAC CTCAATTTCAACCTGATCGCAGGGGGTTCCGGCGGCGGCAGCGGCGCCTC CGTCGGCACCATCACCGACTCCGCCGGCTCCGGCCACAAGTTCTTTTGCA AGTCGGGCGACGCCGCGGACTTCGACATGCTGCGCGCTGAGTATCTGGGA CTCAAGGAGATGTACGAGACGCGCACGATACGCGTGCCGCGCCCCATCTG CACGGGCCTCGTGGGCAACCAGAGCTACGCGGTGTTCGAGTACCTGGCAA TGGGGGTGAGCAGGGGGGCGGAGTCCGCGCGCGAGATGGGCCGCGGTCTC GCCAAGATGCACCTGTGCCACAGCAAAACCGGAAAGTTTGGCTTCCATAT TGACAATACCATCGGCGCGACGCCGCAGCCCAATGGCTGGATGGACAGCT GGCCGGAGTTCTGGGACGAGGTGCGGGGGCGGGCGCTGCTGCTGAGCACT GAGCATGTCATTCTAGCCCTAGCCCTAGTCCTATGCCAAGTGCGCTCGCG AGTCGCTTGTGCACTTGTCCATTTACTTCGAGGCATGCCTGATTGTACAT GTCAGTCTCTGTTGCTTAGTGGGTGGCGGCGCCGCTAGCTGGAGTGTTGT GGGACAGCGTCATTGTGCCGCCATGCACGCCAGTGCTGCTTTTCTGGCTG AACTGCAGCGGCGCTCATCCTACTTGCTGCCCTCTCAGTGCTCTTCATAG CCCAGCGGTACCGACACACCACAAGTACATTTCTGCTCTGCTCATCCTGC TTCACCAAGTAGGCCCAAAGCTGACGGCAGCGCTTACGCATCGTGCCGCA CCTGCTGACCGCCCACTCGTGCATACAAGCAGTATCAGCAGGCCTGCCGG CGGTTTCAGCGAGCAAAACCGTCAACAGTGCTGCAAGCACCACAGTGTGT CATCCGCAGTGCCTTTGTGTTCCTCGTTTCATGTCACAGCGGCGACTGGG CCACATGCTGCGGCTGTGCGAGCAGCAGGGGGCCAAGTACCCGCAGGCAA AGGAGCTGCGGGAGAAGGTCAAGGCAGTGCTTAGCGAGGCTGACGTTAAG CCTTCGCTGGTGCACGGCGATCTCTGGACGGGCAATGCGGGGTACACGGC TGATGGGGAGGGGTGCATCTTCGATCCAGGTATGTGATGGCACCTGCTAT CAGTATGGGTTCCAGACGAGGAATGCAGGGTACATTGCTGTGTGGAAGGG TGCATCCTTGATTAAGGTAAGAAATGGCCATACCGGTTCTTCGAACTATG ATGTATCCACAGTCTGAGACATCTGGCGGTTGCCCTACTGAATGGGGGGC GGGGGGGGGCTTCAATGCAGGCATGGATTGGTGATAACGTATGCCCAGCT TGGTACACACCTGGCCTGTAGAGCAGACCATGTATGAATCCATGCTGCGG CGGACACCGCGGACAGGGTGACATACATAGCATGGGGCACGGTTTGATGC ACTGACATCCGGTCGGGCAGACCTCTGGCGCGCTAGTGCTTTAGTGCACA TGCTGGTTGTATACATCTCCCGTGCACTGCGTGGCTCTGGCGGCCAGGAT CCATCGATTGTCACCAATCTTTAAGCCACATTTGCATCATGACTTCGCCA CTGCTCAAACTGTCCTCATGATGCATATAGAAGCGCGATTATGAGCGACC GTTGTGTGTCTACCTACTCCGGCTTCTCTATGTGCTGCTTCAGTGGTGCG CTTCGGACACAGCAATGCCATGCATGGTGCAGGCTCTGGTGCACAGCCAT TGCACTCTGTAGCAGCGCTTATTGACGCAAACACGTGACCGCTGCCACAA CCGTCTGTTGTCTTGCCACCGCACAGCGACCTACTACGGGCACTCCGAAG TGGATCTGGCCATGTCAGAACTGTTTGGCTCCCTGCCCGGCGGCTTTTAT GCGGGCTACCACGAAGTGATACCGCAGCAACCCGGCCACGAACAGCGGAA AGTCATATATAATGTGAGTTGGAGTACCGCTTGTGGATCCTGGGCAGTAG TCTCTGTGAATGCATGGTGCTCAAATGTATGCCGACTGTGGGCCGCTTTG CAGTTCGCCCAAGTCGGTGATCAGCAACAGTGACATGCCAGTCAGTCTGT CGTGCAACCAACATCTGTTGCCATGATGTGAGAGGACTTGTTGGTGAGTT GTACGCTACCACCGGCTTCAATGTTTGTGGCTGCAGCCATGGCGCGCCGT GACGCAACGGGCTCGCGCCAACCTTGAAACTGAGCGCTGCTGCAGTGAAG AAGAATGCGTCAGCAGACATGAGGGCTGCTGCTGCTGGCCAGTGAGTGAC ATAATACAACGCCTCAACATGCGTAGACCAATTGTGTGTTGTAGAAATCA CTAAAATCTAAAAATCACCTGTGCGCGTTGGTTGGAACACGCCTGTATGA TGCGCAAGGAGCGCGCGTTGATGTGACTGCTGCCACCTCTTTTCAACCCT GATGCTATGATGCTCGCAATGCCAGCGCCTTGAATGACAAATCTGCTTGC TGCACGGCGACACCTATCTGCACTCACCGCCATCCCCTGCTGTGTTGTTT GTGTTGTGCTGTCGCTCTGGTCTTGCATTCGTTTCTGCCCGCCCTCTACC CCCCCCCAGATGTATCACATGCTCAATGTAAGTCCTATCCAGTGATGTGC CAGTGATGATTGAGTTGGTATCAGTGCACTGCATGCCTGAAGGAAGCATT CTGCACTATGCGCACGTTGCAATTCGCTGTGCAAAACGCAGAGAGCTTTG TAATGTGTTGTCACTGCGCAGGCAGCGAGCGCACTGTGCCATTTTCATAG TGGCTGGTTCTGTGATATTTTCTGCTTAAGATGAGCGTCTATGCACAGTT GCACACGGGAGGCACTCTGGCTTGCTGCAGCACCGTCGATCCCCCCAAGT ACTGCTACTGAGAGGTGCGTTGGATGTTGACATGGGCAGGTGTGACAGCA CGTTGCTTCAACATTTGCAACTGTCTCCTGTGCGCGTGACCGTCGCACTT TGCAGCAACCACTTGCTGCTTTTGACGAGCCCTGCAACTCGATCAGATTC TCCCCTTCTGCACCTCCGCTGGCTCCTGTGCTGCAGCACTACGTGCTATT CGGAGGCGGCTACTGGGGCAGTGCCGTGACCATGATGAACAAGGTTATGA ACATGGCTTAG
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Coding sequence (CDS) from alignment at Contig_47:209423..213383-

>mRNA_6204 ID=mRNA_6204|Name=jgi.p|Trimin1|167006|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=900bp|location=Sequence derived from alignment at Contig_47:209423..213383- (Tribonema minus UTEX_B_3156 )
ATGCGAGGCAACGTGCTGGAGAAAATCAGCGATGATATTAGCAAGGAGCT
CGGTGTGCCTTTCAAGGCCAGCTTCAGCTCCAGGGGTTCCGGCGGCGGCA
GCGGCGCCTCCGTCGGCACCATCACCGACTCCGCCGGCTCCGGCCACAAG
TTCTTTTGCAAGTCGGGCGACGCCGCGGACTTCGACATGCTGCGCGCTGA
GTATCTGGGACTCAAGGAGATGTACGAGACGCGCACGATACGCGTGCCGC
GCCCCATCTGCACGGGCCTCGTGGGCAACCAGAGCTACGCGGTGTTCGAG
TACCTGGCAATGGGGGTGAGCAGGGGGGCGGAGTCCGCGCGCGAGATGGG
CCGCGGTCTCGCCAAGATGCACCTGTGCCACAGCAAAACCGGAAAGTTTG
GCTTCCATATTGACAATACCATCGGCGCGACGCCGCAGCCCAATGGCTGG
ATGGACAGCTGGCCGGAGTTCTGGGACGAGCGGCGACTGGGCCACATGCT
GCGGCTGTGCGAGCAGCAGGGGGCCAAGTACCCGCAGGCAAAGGAGCTGC
GGGAGAAGGTCAAGGCAGTGCTTAGCGAGGCTGACGTTAAGCCTTCGCTG
GTGCACGGCGATCTCTGGACGGGCAATGCGGGGTACACGGCTGATGGGGA
GGGGTGCATCTTCGATCCAGCGACCTACTACGGGCACTCCGAAGTGGATC
TGGCCATGTCAGAACTGTTTGGCTCCCTGCCCGGCGGCTTTTATGCGGGC
TACCACGAAGTGATACCGCAGCAACCCGGCCACGAACAGCGGAAAGTCAT
ATATAATATGTATCACATGCTCAATCACTACGTGCTATTCGGAGGCGGCT
ACTGGGGCAGTGCCGTGACCATGATGAACAAGGTTATGAACATGGCTTAG
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