mRNA_610 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: A0A836CI07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI07_9STRA) HSP 1 Score: 751 bits (1939), Expect = 8.030e-275 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 1 Query: 1 MSPGESWTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYRDVATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRLTKACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHANNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARALAIQLPTEMIDLISALHARHITSILKND 1059 MSPGESWTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYRDVATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRLTKACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHANNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARALAIQLPTEMIDLISALHARHITSILKND Sbjct: 1 MSPGESWTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYRDVATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRLTKACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHANNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARALAIQLPTEMIDLISALHARHITSILKND 353
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.370e-81 Identity = 139/347 (40.06%), Postives = 187/347 (53.89%), Query Frame = 1 Query: 13 ESWTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYRD----VATQNDLYRLNMRTLEWTHILSKG-AWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRLT---KACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHA-----------------NNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARAL 978 + W ++Q +G P RSGH V+G VYLFGG + ND+Y ++ + W + +KG + PS RA+F +CAGP + GG G ++ DV +DT W ++T + P++ YG + C Y LL++GGS+G HY + + +YN + W L T G PS RYKH V+GD+MY+IGGG FKP Q +ID+Y+ + R W G+VP R AH C FD + IY +GGF ++R D YDT I P ARAFH+AV +DGALYV GA+GDVRY DVWRF +TPP VLAARAL Sbjct: 28 QQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGT---GVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARAL 371
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI) HSP 1 Score: 261 bits (666), Expect = 1.120e-80 Identity = 134/341 (39.30%), Postives = 182/341 (53.37%), Query Frame = 1 Query: 19 WTRIQATGEGPLSRSGHGAVVIGDMVYLFGG----YRDVATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRL---TKACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYD--TLTHNRRSIHANNVP------------PARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARAL 978 WT++ +G+ P RSGH VVIG YLFGG + ND+Y N+ W+ + KG P PRA+F +CAGP P + GG G ++ DV Y+ W ++ ++ P K YG S C Y LL++GGS+G HY + + +YN R + W L+T G PS RYKH V+G MY+IGGG FKP Q ID+Y + R+ W +G++P R AH C FDA + IY +GGF ++R D + T T R + P PARAFH+A + G LYV GA+GDVRY DVWRF +TPP+ +L A + Sbjct: 37 WTKLNTSGDSPSPRSGHDVVVIGHKAYLFGGCGGEQDQITCLNDVYVFNLELHRWSKVTVKGDAPLPRASFGMCAGPAPGTLIVAGGT---GVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGGATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKI 374
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA) HSP 1 Score: 258 bits (659), Expect = 1.400e-79 Identity = 134/345 (38.84%), Postives = 185/345 (53.62%), Query Frame = 1 Query: 19 WTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYR-----DVATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRL---TKACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHA-------------------NNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAAR 972 W +Q +G+GP RSGH VVIG YLFGG +A ND+Y ++ T +W + G P PRA+F +CA P P + +V G G G ++ D+ +DT W+R+ ++ P + YG S C Y LL++GGS+G HY + + +YN W L T G P+ RYKH ++G SMY+IGGG FKP Q +ID+++ + W V G VP R AH C +DA +G I+ +GGF ++R D T R+ A +PPARAFHAA ++ ALYV GA+GDVRY DVWR+ +PP+ VLAAR Sbjct: 20 WVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAG--GTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAAR 362
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI) HSP 1 Score: 253 bits (645), Expect = 1.110e-77 Identity = 132/332 (39.76%), Postives = 181/332 (54.52%), Query Frame = 1 Query: 19 WTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYR----DVATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRL---TKACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAE--GKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSI---HANNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARAL 978 W R+Q +G P RSGH VIG+ YLFGG + ND+Y +++ W + KG RA+F +C GP P + GG G ++ DV Y+T W + ++ P K YG S C Y LL++GGS+G HY + + +YN + W L T G PS RYKH +GD MY+IGGG FKP Q SID+Y + + W E E G +P R AH C FD G IY +GGF ++R +D Y+ + R + + PPARAFH+AV +DGALY+ GA+GD+RY DVWR+ +PP+ VLA++ L Sbjct: 32 WVRLQTSGRPPSPRSGHDVAVIGNKAYLFGGCGGDEDQITCLNDMYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGT---GVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVL 360
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA) HSP 1 Score: 246 bits (629), Expect = 5.160e-75 Identity = 135/351 (38.46%), Postives = 181/351 (51.57%), Query Frame = 1 Query: 19 WTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYRD----VATQNDLYRLNMRTLEWTHILSKGA-WPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRLTKA---CPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHANN-----------------------VPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARAL 978 W ++Q G P RSGH V+G+ +YLFGG + ND+Y ++ W I +G P+ RA+FA+C+GP+ + GG G ++ D+ +DT W +L + P+K YG + C Y LL++GGS+G HY + + +YN + W L+T G PS RYKH V+GD MY+IGGG FKP Q +IDMY N R W+ + G VP R AH C FD + IY +GGF ++R D Y T I P ARAFH+AV Y GALYV GA+GDVRY DVWR+ ++PP VLA RAL Sbjct: 35 WVKLQVCGTVPSPRSGHDVAVVGNKLYLFGGCGGENDAINCLNDMYTFDLDRHVWELIPHRGEEMPTARASFAMCSGPDEKTLIVAGGT---GVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGDVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRYRMRSSPPALGVLAGRAL 382
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: A0A835YN69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN69_9STRA) HSP 1 Score: 219 bits (559), Expect = 4.720e-65 Identity = 116/326 (35.58%), Postives = 170/326 (52.15%), Query Frame = 1 Query: 19 WTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYRDVATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRLTKACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHANNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARALAIQLPT 996 W ++ G+ P +RSG GAVV+ D+VY+FGG A ND+ + T EW I + PS R +F IC GP T+ G D T G ++ D+W ++ W + + P +YG S CW D LL+YGGS+G Y D + ++ + + T G+ PS RYK V+ +++Y+ GGGAF P + M+K N + W +EAE + R A C D+ + + FGGF R +D + + PP RAFH+ VL G+L +L G+DGD + DVW+F +TPP+ Q+LAA+A PT Sbjct: 16 WRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQ-LGPSARTSFGICLGPGVEDVTVACGCNLD--TPGALA-DIWSFNVRHRTWTKRFDS-PRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPT 336
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: A0A7S2XVZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVZ9_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.420e-60 Identity = 115/335 (34.33%), Postives = 170/335 (50.75%), Query Frame = 1 Query: 13 ESWTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYRDVATQ-----NDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRLTKA-----CPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHA--NNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARALA 981 ++W ++ G RSGHG VV VYLFGG + + +D + T W+ + ++G P RA+F + GP+P + GG D T D++ Y+ + W+ L K C K YG S C Y G L +GGS G Y + + +Y+ ++ + T G P RYK V+ DS+ +IGGG ++PP ID+++ + WS + G VP GR AH C +D + IY +GGF+ + R +D D T +I + N P RAFH + L+DG+ Y+ GGADGD R+ DVWRF TPP+ + A +A Sbjct: 31 KTWQKVPCAGTITGGRSGHGMVVYQSKVYLFGGCGGESVEERSCLSDFLVFDFSTQSWSAVQTRGEPPHARASFGMSRGPDPGTLIVAGGTGQDMDTFS----DIYEYNISSSTWRLLIKGEKANFC--KYYGQSICEYKGNLFFFGGSRGRTYSNVLYRYDCAQEEGAAVPTTGKAPCPRYKQQMMVVKDSLLVIGGGNYRPPTHQIDVHELDLLTLNWSQWKTSGNVPQGRVAHTCTYDENTHQIYLWGGFNVVLHRLNDFHVLDIATRKWSTIISLDNQSPRPRAFHCSCLHDGSFYIFGGADGDFRHSDVWRFRTNVTPPSLMSICAGTVA 359
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: A0A7S2V4S9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4S9_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.490e-58 Identity = 114/340 (33.53%), Postives = 171/340 (50.29%), Query Frame = 1 Query: 19 WTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYRDV----ATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCD-VWVYDTTIHEWKRLTKACPN--KVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDL-------SEYDTLTHNRRSIHANNV-----PPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARALA 981 W ++ GE P +RSGHG +IG +Y+FGG A D R++M+TL W ++ S G PSPRA+FA+ PE + + GGT + CD ++ ++ W R+ N K YG S C + + +GGS G+ Y + + + T G P ARYKH ++G +M++IGGG ++P +++D+YK N EWS V G +P GR AH +D S IY +GGF + R D E++ L+ + N+ P RAFH A YD ++Y+ GGADG R+ D+W++ +P + LA A A Sbjct: 27 WKVVKFQGEHPGARSGHGLAIIGHYLYIFGGCGGPTDGGACMADFMRMDMKTLTWQNVRSHGENPSPRASFAMVGVPERSSIIV------SGGTGDDLLCDDLFEFNIPTGHWCRILSDGNNFAKYYGQSVCVFRSHVYFFGGSKGTQYTNQLXXXXXXXXXXSEVQTRGTVPDARYKHQALMVGSNMFVIGGGNYRPVNENLDVYKLNMITMEWSCVHTTGCIPKGRVAHVAEYDRLSNKIYVWGGFTSTLHRLHDFFSLALDSMEWECLSEKNGWMEKNDRQMKSGPCPRAFHGAFFYDSSMYIFGGADGQNRHEDMWKYQLRCSPLSLLDLAGEAAA 360
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Match: A0A7S2UXP7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP7_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.290e-58 Identity = 112/337 (33.23%), Postives = 167/337 (49.55%), Query Frame = 1 Query: 13 ESWTRIQATGEGPLSRSGHGAVVIGDMVYLFGG----YRDVATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRL--------TKACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHANNV----PPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARA 975 + W R++ +R HG VV+G Y+FGG +A DL + + I G PS RA+FA+C GP+ + GG DG G D+W Y++ +W RL + C ++YG S C Y L+ +GGSSG Y + V +++ + L T G P ARYKH ++G+ M+I GGG + P +ID++ +F W+ V A G+ P R AH D S IY +GGF+ + R D +D +T ++H N P RAFHA+ +Y +++ GGA+ + RY DVW++ P + VLA RA Sbjct: 2 QQWKRLKCNVNEISARCDHGVVVLGPYAYIFGGCTGPVSSMACSPDLICFDFKARRCIKIKCAGEKPSGRASFAMCKGPDKGTLILAGGTGDDGLPRG----DIWEYNSLSRKWNRLFLSDGGLASTFC--RLYGQSVCCYGRSLIFFGGSSGKCYSNEVFKFDVDTLQYEQLKTKGTAPYARYKHQANIVGNKMFIFGGGNYLPSTKNIDVFCLDFETLRWNKVNALGQEPQARVAHTTVMDEISNKIYLWGGFNTSLNRLQDFFCFDIITSTWTALHCNKTSSYCPSPRAFHASCIYGDGIFIFGGANEENRYSDVWKYLVRHNPLSLMVLATRA 332 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157126 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_610 ID=mRNA_610|Name=jgi.p|Trimin1|157126|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1062bp|location=Sequence derived from alignment at Contig_2:744633..745694- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGTCCAGGGGAGTCCTGGACTCGCATTCAAGCGACCGGCGAAGGACCback to top protein sequence of jgi.p|Trimin1|157126 >Trimin1|157126|e_gw1.2.156.1 ID=Trimin1|157126|e_gw1.2.156.1|Name=jgi.p|Trimin1|157126|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=354bp MSPGESWTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYRDVATQNDLYRLback to top mRNA from alignment at Contig_2:744633..745694- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_610 ID=mRNA_610|Name=jgi.p|Trimin1|157126|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1062bp|location=Sequence derived from alignment at Contig_2:744633..745694- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:744633..745694- >mRNA_610 ID=mRNA_610|Name=jgi.p|Trimin1|157126|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1062bp|location=Sequence derived from alignment at Contig_2:744633..745694- (Tribonema minus UTEX_B_3156 )back to top |