mRNA_604 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A835ZA04_9STRA (DUF5672 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA04_9STRA) HSP 1 Score: 474 bits (1219), Expect = 2.270e-169 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1 Query: 1 MNAPCTHRNSSENDRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPPALLATLRGLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEEYDYIGAPCGEVTEDKVVFNGGLSLRKKAAMLRTCGGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVHGTDKYYINPEVIFTEQVRRASH 675 MNAPCTHRNSSENDRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPPALLATLRGLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEEYDYIGAPCGEVTEDKVVFNGGLSLRKKAAMLRTCGGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVHGTDKYYINPEVIFTEQVRRASH Sbjct: 1 MNAPCTHRNSSENDRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPPALLATLRGLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEEYDYIGAPCGEVTEDKVVFNGGLSLRKKAAMLRTCGGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVHGTDKYYINPEVIFTEQVRRASH 225
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A835Z1P7_9STRA (DUF5672 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P7_9STRA) HSP 1 Score: 268 bits (685), Expect = 6.630e-88 Identity = 126/211 (59.72%), Postives = 158/211 (74.88%), Query Frame = 1 Query: 13 CTHRNSSENDRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPPALLATLRGLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEEYDYIGAPCGEVTEDKVVFNGGLSLRKKAAMLRTCGGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVHGTDKYYINPEVI 645 C HRN ++N RVAVIVETRDAFFLPLVI N DKLG +WN H+ AP +LA+LR P C F +T L ++S+YSALLRR SFW+ IREE IL+FQLD + LRG+P WAE YDYIGAPCG V +DK V NGGLSLRKK+AML+ GDD++ ESE ED+++TR+LR+ G LPS+ A RFACES+Y ++ CGVHGT Y++ + + Sbjct: 18 CLHRNLAQNTRVAVIVETRDAFFLPLVIANTVDKLGADWNLHVIAPAEVLASLRKSLPECEFASTTLACPTKISTSQYSALLRRRSFWSRIREEIILVFQLDVVMLRGVPAWAESYDYIGAPCG-VLDDKYVINGGLSLRKKSAMLQL-SGDDSMSESEAEDIFFTRELRSAGAALPSIRDATRFACESIYEKECCGVHGTCHYFLPSDTV 226
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A6C0LU15_9ZZZZ (DUF5672 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LU15_9ZZZZ) HSP 1 Score: 147 bits (371), Expect = 2.060e-40 Identity = 86/218 (39.45%), Postives = 124/218 (56.88%), Query Frame = 1 Query: 40 DRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPPALLATLRGLFPNCAFTTTKLHVEPPFTSSK----------YSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEEYDYIGAPCGEV-TEDKVVFNGGLSLRKKAAMLRTCGGDDTICESEPEDVYYTRKLRNHGG--KLPSVSTALRFACESLYHED-ACGVHGTDKYYINPEVIFT 651 ++ VI+ETR +F+LPLVIKNA DK E+N H+F P ++ L +HV+ + ++ Y+ LL SFW I EE I+IFQLDTLFLR +YDYIGA CG++ E+ + NGGLS R K AM++ C + ++ ED+ +T +R H LP++ T FA E++ + D A G+HGTDKYYI + I++ Sbjct: 25 NKCLVIIETRTSFWLPLVIKNAIDKCP-EYNLHVFGTPNVIQFL------------DIHVKGDYKKTRIDCYMRNIQDYNMLLTNTSFWERIEEEHIIIFQLDTLFLRSPTDNHYKYDYIGAVCGDLQNENTFIINGGLSYRSKRAMIKACDMIEPDDLNKTEDIVFTTLMRKHPDIFSLPTIQTCNNFAIETIGNVDNAIGIHGTDKYYIFDKTIYS 229
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A6C0EHQ7_9ZZZZ (DUF5672 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EHQ7_9ZZZZ) HSP 1 Score: 143 bits (361), Expect = 6.830e-39 Identity = 87/212 (41.04%), Postives = 124/212 (58.49%), Query Frame = 1 Query: 37 NDRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPPALLATLR----GLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEEYDYIGAPCGEVT-EDKVVFNGGLSLRKKAAMLRTCGGDDTICESEPEDVYYTRKLRNHGG--KLPSVSTALRFACESLYHED-ACGVHGTDKYYINPEVIF 648 +++ VI+ETR +F+LPLVIKNA DK +N ++F P + LR G + T +++ +Y+ LL FW+ I+EE I+IFQLDTLFLR +YDY GA CG++ E++ + NGGLS R K AML C D + PEDV +T+ +R H KLP++S F+ E+L + D G+HGTDKYYI + I+ Sbjct: 25 SNKCLVIIETRPSFWLPLVIKNAVDKCPG-YNLYVFCTPNVNQFLRDALEGDYYRIIINTYMQNIQ------EYNQLLTNYDFWDQIKEENIIIFQLDTLFLRTPTSEHMQYDYNGAVCGKLNRENEFIINGGLSYRSKKAMLIACKLIDDSYDGLPEDVIFTKLMRKHPELFKLPNISECNDFSIETLGNFDNVIGIHGTDKYYILEKNIY 229
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A6G6XQJ0_9VIRU (DUF5672 domain-containing protein n=1 Tax=Dishui Lake large algae virus 1 TaxID=2704073 RepID=A0A6G6XQJ0_9VIRU) HSP 1 Score: 114 bits (284), Expect = 3.420e-27 Identity = 79/231 (34.20%), Postives = 110/231 (47.62%), Query Frame = 1 Query: 16 THRNSSENDRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPPALLATLRGLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLD-TLFLRGIPK-WAEE----YDYIGAPC---GEVTEDKVVFNGGLSLRKKAAML--------------RTCGGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVHGTDKYYINPE 639 T N+ DRVAVI+E R L VI+N GN WN H+F + +R F C+F T L+ + T +YS +L +FWN I EE +LIFQ D LF +G+ W ++ +DY+GA VT GGLSLRKK+AML R+ + I EDV++T ++PS+ F+ E+ Y+ A G HG Y+ E Sbjct: 23 TFVNNPSKDRVAVIIEPRRHELLFQVIRNVMYNAGNNWNLHVFTTEENIEWIRDGFKGCSFRITLLN-KNNITRDEYSMILMSDTFWNTIPEENVLIFQTDCVLFRKGLLDIWIDDHDHGFDYVGANYYNPNHVTASIGGIQGGLSLRKKSAMLDCIKNVSLHDVHAYRSRNRLEPIYNFIHEDVFFTHACSILNKRVPSIEKRREFSIEADYYPAALGHHGLTHKYLTAE 252
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A6C0H4P9_9ZZZZ (DUF5672 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0H4P9_9ZZZZ) HSP 1 Score: 87.8 bits (216), Expect = 2.270e-17 Identity = 73/209 (34.93%), Postives = 98/209 (46.89%), Query Frame = 1 Query: 34 ENDRVAVIVETRDAFFLPLVIKNAADKLGNE-WNTHIFAPPALLATLR-GL--FPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIRE---ETILIFQLDTLFLRGIPKWAEEYDYIGAPCGEVTEDKV----VFNGGLSLRKKAAMLRTCGGDDTICESEP------EDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVH 609 + ++ VI+E R L +VIKN L + W IF L+ GL +PN E T Y+ LL SFW + LIFQLDT+ L+ EYDY+GAP E ++D V + NGGLSLR + ML I E P ED+Y++ L+ LPSV A F+ E++YH D CG+H Sbjct: 26 KTNKHCVIIEPRAHDKLIIVIKNFMYLLQKKGWGLIIFHSSENENMLKEGLKDWPNVIMIN---QFERNITIYDYNVLLCSSSFWKQLLSLGCHNCLIFQLDTVLLKDNIDDFIEYDYVGAPWDEKSQDNVFRAEIGNGGLSLRNVSKMLY-------ITEIYPIRDVISEDLYFSFNLKLDKANLPSVEKAKNFSVETIYHPDTCGMH 224
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A2V0PD74_9CHLO (DUF5672 domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PD74_9CHLO) HSP 1 Score: 89.4 bits (220), Expect = 2.900e-17 Identity = 68/219 (31.05%), Postives = 101/219 (46.12%), Query Frame = 1 Query: 7 APCTHRNSSENDRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIF----------APPALLATLR-GLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAE---EYDYIGAPC----GEVTEDKVVFNGGLSLRKKAAMLRTCGGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVH 609 AP + ++ +VAV+ ETR + L V+ A +L +W +F A PAL + G + +Y+ALL +FW+A+ E +LIFQLD+ P + EYDY+GAP G NGGLSLR+++AMLR+ ED+ + L GG+LP+ TA FA E +++E G+H Sbjct: 115 APAFAKQAAGAGKVAVLAETRASDRLVPVVVLFATRLPPDWRLQLFLSDEARAAAGAAPALRGWIESGRIIPLPWARAGNSTNVGVVVGEYNALLLSKAFWHAVAGEHVLIFQLDSALCAASPHKLDDFLEYDYVGAPWPESYGGPDHRPGCGNGGLSLRRRSAMLRSLERTGAPTNRN-EDLVFCDGLSAIGGRLPTRETARTFAVEMMFYERPLGLH 332
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A820VGC3_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A820VGC3_9BILA) HSP 1 Score: 87.0 bits (214), Expect = 6.310e-17 Identity = 64/203 (31.53%), Postives = 94/203 (46.31%), Query Frame = 1 Query: 46 VAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPP-----ALLATLRGLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEE---YDYIGAPCG----EVTEDKVVFNGGLSLRKKA---AMLRTCGGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVH 609 +AV+V+ R + ++ N + + W IF +TL L + T + E + S+ S LL P FW +R E IL+FQ+D++ P + YDY+GAP + +V NGG SLR ++ A+L D I PEDV+Y + L +PSV A FA ES+Y+E GVH Sbjct: 48 IAVLVDFRTVNQIVSIVHNVNQHIPSSWPIQIFHGKNNQNFIQNSTLAPLIASRKIFLTLM--EEVYDRSRTSELLTDPKFWERVRGEKILLFQIDSVMCSNSPHKITDFLQYDYVGAPWDLSWFGFNKAYLVGNGGFSLRSRSKILALLALVKYDVNI----PEDVWYAQNLHRVNASIPSVEIAKTFAVESIYYEIPLGVH 244
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A814DJR8_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A814DJR8_9BILA) HSP 1 Score: 85.1 bits (209), Expect = 2.450e-16 Identity = 61/203 (30.05%), Postives = 92/203 (45.32%), Query Frame = 1 Query: 46 VAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPP-----ALLATLRGLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEE---YDYIGAPCG----EVTEDKVVFNGGLSLRKKA---AMLRTCGGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVH 609 +AV+VE R + ++ N + + W IF +TL L + T ++ + ++ + LL P FW +R E IL FQ+D++ P + YDYIGAP + V NGG SLR ++ A+L D I PEDV+Y + L G +PS+ A F+ ES+Y+ GVH Sbjct: 31 IAVLVEFRTVDHIIAIVHNVNHHIPSTWPIQIFHGKDNEDFIKNSTLAPLIASGKIFLT--FMDQVYDRARTNQLLTNPIFWQCVRGEKILFFQIDSVMCSNSPHKITDFLQYDYIGAPWDLSFFSFNKQYRVGNGGFSLRSRSKILALLALISYDSRI----PEDVWYAQNLHRVNGSIPSIEIAKTFSVESMYYARPLGVH 227
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Match: A0A821XAT7_9BILA (Hypothetical protein n=6 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821XAT7_9BILA) HSP 1 Score: 85.9 bits (211), Expect = 4.740e-16 Identity = 62/201 (30.85%), Postives = 93/201 (46.27%), Query Frame = 1 Query: 46 VAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPPALLATLRGLFPNCAFTTTKL---HVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEE---YDYIGAP--CGEVTEDKV--VFNGGLSLRKKA---AMLRTCGGDDTICESEPEDVYYTRKLRNHGGKLPSVSTALRFACESLYHEDACGVH 609 +AV+VE R + ++ N + + W IF A ++ + K+ ++ + + + LL P FW IR E IL+FQ+D+ P + YDYIGAP T D+ V NGG SLR ++ A+L D I PEDV+Y + L G +PS+ A F+ ES+Y+ GVH Sbjct: 69 IAVLVEFRTVDHIVAIVHNINHHIPSTWPIQIFHGKDNEAFIKNSTLASLIISGKIFLTYMNETYDRGRTNQLLTDPKFWQRIRGEKILLFQIDSAMCSNSPHKITDFLQYDYIGAPWDLSFFTFDRQYRVGNGGFSLRSRSKILALLALIPYDSKI----PEDVWYAQNLHRVNGSIPSIEIAKTFSVESMYYVRPLGVH 265 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157159 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_604 ID=mRNA_604|Name=jgi.p|Trimin1|157159|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=678bp|location=Sequence derived from alignment at Contig_2:722196..722873+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAATGCTCCGTGCACACATCGCAATTCGAGTGAGAATGACAGGGTCGCback to top protein sequence of jgi.p|Trimin1|157159 >Trimin1|157159|e_gw1.2.20.1 ID=Trimin1|157159|e_gw1.2.20.1|Name=jgi.p|Trimin1|157159|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=226bp MNAPCTHRNSSENDRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPback to top mRNA from alignment at Contig_2:722196..722873+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_604 ID=mRNA_604|Name=jgi.p|Trimin1|157159|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=678bp|location=Sequence derived from alignment at Contig_2:722196..722873+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:722196..722873+ >mRNA_604 ID=mRNA_604|Name=jgi.p|Trimin1|157159|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=678bp|location=Sequence derived from alignment at Contig_2:722196..722873+ (Tribonema minus UTEX_B_3156 )back to top |