mRNA_5930 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164764
Unique NamemRNA_5930
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: A0A835Z354_9STRA (Putative eukaryotic initiation factor 4E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z354_9STRA)

HSP 1 Score: 459 bits (1182), Expect = 1.260e-163
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1 
Query:    1 MIHRSEGANGLYDSPEDTTGGTQTAIQNRYCFWYKQKGNKQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASRQELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMSGLAGGSQGGXXXXXNQGQQPGVFRGGSWSRGPGGAGSQR 684
            MIHRSEGANGLYDSPEDTTGGTQTAIQNRYCFWYKQKGNKQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASRQELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMSGLAGGSQGGXXXXXNQGQQPGVFRGGSWSRGPGGAGSQR
Sbjct:    1 MIHRSEGANGLYDSPEDTTGGTQTAIQNRYCFWYKQKGNKQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASRQELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMSGLAGGSQGGXXXXXNQGQQPGVFRGGSWSRGPGGAGSQR 228
[Close]
BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: D8LBW9_ECTSI (Novel cap binding protein nCBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW9_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 6.900e-80
Identity = 130/217 (59.91%), Postives = 164/217 (75.58%), Query Frame = 1 
Query:   31 LYDSPEDTTGGTQTAIQNRYCFWYKQKGNKQLT---TEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMSGLAGGSQ--GGXXXXXNQGQQP-GVFRGGSWSR 657
            LY+ PED TG  QT IQNRYCFWY +KG ++ +   +E YES IK + SFQTVEHFWRIYNH+ R DQVP  TD HLF+DGIKP WED+ N+RGG  ++RLKKGLASR  + L+LA+IGEQFDVGNEICGAV+SVRYSEDV+ VWNR+A N E  +KIRD ++R+L++P+FVQ+EYRRHQD++   +   +  GG     + G  P G   GG+W+R
Sbjct:   81 LYNEPEDLTGTRQTLIQNRYCFWYYRKGAQKESKDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDASNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIEKIRDTVKRLLQIPSFVQVEYRRHQDNLGAASVREERGGGGFPAASPGFGPRGGPPGGAWTR 297
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BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: A0A7S2B9L2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9L2_9STRA)

HSP 1 Score: 237 bits (605), Expect = 5.630e-75
Identity = 106/182 (58.24%), Postives = 144/182 (79.12%), Query Frame = 1 
Query:   31 LYDSPEDTTGGTQTAIQNRYCFWYKQKGNKQLTTED-YESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMS 567
            L D PED     QTAIQNRY FW+ Q+ +K     D ++++++Q+ASFQTV+HFWR+Y+H+QR   +P  TD+HLFKDGIKP WED  N +GG W++RL+KGLA+R  +ELLL ++GEQFDVGNE+CGAV+S+RY+ED++ +WNRNADN EA  KIRD +RR+L+LP F+  EY+RH D++S
Sbjct:   18 LVDEPEDLE--KQTAIQNRYVFWFMQRQSKSAVGNDNFDANLQQIASFQTVQHFWRVYDHVQRATSLPQMTDFHLFKDGIKPTWEDPSNKQGGKWIIRLRKGLAARYWEELLLGIVGEQFDVGNEVCGAVLSIRYNEDIISIWNRNADNTEATSKIRDHMRRLLRLPAFISTEYKRHADALS 197
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BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: A0A485LDV3_9STRA (Aste57867_20004 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDV3_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.060e-71
Identity = 103/169 (60.95%), Postives = 136/169 (80.47%), Query Frame = 1 
Query:   67 QTAIQNRYCFWYKQKGNKQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMS 567
            ++ IQN YCFWY +K + +  TE YE SIK+L  F+TV+ FWR+YNHL RP+ +P  TDYHLFK GIKP WED+ N RGG WM+R++KG+ASR  ++L+LA++GEQFDVGNEICGAVMS+RY+ED++ +WNRNADN EA  +IRD +R++L LP FV LEY+RH  S++
Sbjct:   19 ESPIQNTYCFWYMKKNSGK--TESYEKSIKELGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSLN 185
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BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: F0W0Q3_9STRA (Eukaryotic initiation factor 4E putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0Q3_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.750e-71
Identity = 106/181 (58.56%), Postives = 136/181 (75.14%), Query Frame = 1 
Query:   31 LYDSPEDTTGGTQTAIQNRYCFWYKQKGNKQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMS 567
            + ++ +DTTG +   IQN Y FWY  K N     E YE SIK+L  F+TV+ FW IYNHL RP+ +P   DYHLFK GIKP WED  N RGG WM+R++KG+ASR  ++L+LA+IGEQFDVGNEICGAV+S+RY+ED++ +WNRNADN EA  +IRD +RR+L LP FV LEY+RH  S++
Sbjct:   11 ISEADDDTTGKSDAPIQNMYTFWYM-KRNTANKAESYEKSIKELGDFKTVQGFWCIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDPSNRRGGKWMVRMRKGIASRYWEDLILAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRRVLNLPQFVALEYKRHDASLN 190
[Close]
BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: A0A067CC28_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CC28_SAPPC)

HSP 1 Score: 228 bits (581), Expect = 1.760e-71
Identity = 102/169 (60.36%), Postives = 134/169 (79.29%), Query Frame = 1 
Query:   67 QTAIQNRYCFWYKQKGNKQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMS 567
            +TAIQN YCFWY +K       E YE SIK+L  F+TV+ FWR+YN+L RP+++   TDYHLFK GIKP WED+ N RGG WM+R++KG++SR  ++L+LA+IGEQFDVGNEICGAVMS+RY+ED++ +WNRNADN EA  +IRD +R++L LP FV LEY+RH  S++
Sbjct:    7 ETAIQNSYCFWYMKKNTGGKAAESYEKSIKELGEFKTVQGFWRLYNYLIRPNELSNTTDYHLFKTGIKPMWEDAANRRGGKWMIRIRKGVSSRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVVLEYKRHDTSLN 175
[Close]
BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: D0MYJ6_PHYIT (Eukaryotic initiation factor 4E, putative n=11 Tax=Phytophthora TaxID=4783 RepID=D0MYJ6_PHYIT)

HSP 1 Score: 228 bits (580), Expect = 2.200e-71
Identity = 107/174 (61.49%), Postives = 136/174 (78.16%), Query Frame = 1 
Query:   58 GGTQTAIQNRYCFWY--KQKGNKQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMS 567
            G T+T IQN Y FWY  +  GNK ++ E YE SIK L  F+TV+ FW+IYNHL RP+ +P   DYHLFK GIKP WEDS N RGG WM+RL+KG+ASR  ++L+LA+IGEQFDVGNEICGAV+S+RY+ED++ +WNRNADN EA  +IRD +R++L LP FV LEY+RH  S++
Sbjct:   18 GTTETPIQNMYTFWYIKRSTGNKAVS-ESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDSANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDTSLN 190
[Close]
BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: A0A024TVS7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVS7_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.350e-70
Identity = 106/177 (59.89%), Postives = 136/177 (76.84%), Query Frame = 1 
Query:   49 DTTGGTQTAIQNRYCFWYKQK--GNKQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMS 567
            D TG  ++ IQN Y FWY +K  G      E YE SIK++A F+TV+ FWR+YNHL RP+ +P  TDYHLFK GIKP WEDS N RGG WM+R++KG+ASR  ++L+LA+IGEQFDVGNEICGAVMS+RY+ED++ +WNRNADN EA  +IRD +R++L LP F  LEY+RH  S++
Sbjct:   12 DATG--ESPIQNTYTFWYMKKNSGKALEDQESYEKSIKEIAEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDSANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFASLEYKRHDTSLN 186
[Close]
BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: A0A6G0XTE8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTE8_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.480e-70
Identity = 102/171 (59.65%), Postives = 134/171 (78.36%), Query Frame = 1 
Query:   67 QTAIQNRYCFWYKQKGNKQLTT--EDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMS 567
            +  IQN YCFWY +K + +     E YE SIK++  F+TV+ FWR+YNHL RP+ +P  TDYHLFK GIKP WED+ N RGG WM+R++KG+ASR  ++L+LA+IGEQFDVGNEICGAVMS+RY+ED++ +WNRNADN EA  +IRD +R++L LP FV LEY+RH  S++
Sbjct:   19 EAPIQNTYCFWYMKKNSGKTLDDQESYEKSIKEIGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKSGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSLN 189
[Close]
BLAST of jgi.p|Trimin1|164764 vs. uniprot
Match: W4FZB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZB5_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.890e-70
Identity = 105/180 (58.33%), Postives = 138/180 (76.67%), Query Frame = 1 
Query:   40 SPEDTTGGTQTAIQNRYCFWYKQK--GNKQLTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMS 567
            +P DT G  +  IQN Y FWY +K  G      E YE SIK+++ F+TV+ FWR+YNHL RP+ +P  TDYHLFK GIKP WED+ N RGG WM+R++KG+ASR  ++L+LA++GEQFDVGNEICGAVMS+RY+ED++ +WNRNADN EA  +IRD +R++L LP FV LEY+RH  S++
Sbjct:   10 APVDTAG--EVPIQNTYTFWYMKKNSGKALEDQESYEKSIKEISEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDTANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNSEACYRIRDTMRKLLNLPQFVSLEYKRHDTSLN 187
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164764 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z354_9STRA1.260e-163100.00Putative eukaryotic initiation factor 4E n=1 Tax=T... [more]
D8LBW9_ECTSI6.900e-8059.91Novel cap binding protein nCBP n=2 Tax=Ectocarpus ... [more]
A0A7S2B9L2_9STRA5.630e-7558.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A485LDV3_9STRA1.060e-7160.95Aste57867_20004 protein n=1 Tax=Aphanomyces stella... [more]
F0W0Q3_9STRA1.750e-7158.56Eukaryotic initiation factor 4E putative n=1 Tax=A... [more]
A0A067CC28_SAPPC1.760e-7160.36Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
D0MYJ6_PHYIT2.200e-7161.49Eukaryotic initiation factor 4E, putative n=11 Tax... [more]
A0A024TVS7_9STRA1.350e-7059.89Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0XTE8_9STRA1.480e-7059.65Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FZB5_9STRA1.890e-7058.33Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:288762..291197 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164764|e_gw1.33.176.1
BRITEko00000,ko00001,ko00002,ko03012,ko03019
KEGG ModuleM00428
KEGG Pathwayko01521,ko03013,ko04066,ko04150,ko04151,ko04211,ko04910,map01521,map03013,map04066,map04150,map04151,map04211,map04910
KEGG koko:K03259
GOsGO:0000339,GO:0000340,GO:0001701,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005845,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0007275,GO:0007553,GO:0007554,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010565,GO:0010566,GO:0010605,GO:0010608,GO:0010629,GO:0010817,GO:0010893,GO:0017148,GO:0019216,GO:0019218,GO:0019222,GO:0019538,GO:0019899,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031625,GO:0032268,GO:0032269,GO:0032350,GO:0032352,GO:0032501,GO:0032502,GO:0032991,GO:0034248,GO:0034249,GO:0034518,GO:0034641,GO:0034645,GO:0043009,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0045182,GO:0045834,GO:0045940,GO:0045966,GO:0045998,GO:0046885,GO:0046886,GO:0046889,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0051094,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0060255,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090030,GO:0090031,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000026,GO:2000112,GO:2000113
Preferred nameEIF4E2
Descriptiontranslation initiation factor activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5053@1|root,KOG1669@2759|Eukaryota
Evalue1.13e-80
Seed ortholog2880.D8LBW9
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionnovel cap binding protein nCBP
Ec32 orthologEc-20_003570.1
TranscriptId165086
TrackFilteredModels1
ProteinId164764
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164764gene_5930Tribonema minus UTEX_B_3156 geneContig_33 288762..291197 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5930_1exon_5930_1Tribonema minus UTEX_B_3156 exonContig_33 288762..289001 +
exon_5930_2exon_5930_2Tribonema minus UTEX_B_3156 exonContig_33 289289..289396 +
exon_5930_3exon_5930_3Tribonema minus UTEX_B_3156 exonContig_33 289863..289910 +
exon_5930_4exon_5930_4Tribonema minus UTEX_B_3156 exonContig_33 290907..291197 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5930CDS_5930Tribonema minus UTEX_B_3156 CDSContig_33 288762..289001 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164764Trimin1|164764|e_gw1.33.176.1Tribonema minus UTEX_B_3156 polypeptideContig_33 288762..291197 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5930 ID=mRNA_5930|Name=jgi.p|Trimin1|164764|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=687bp|location=Sequence derived from alignment at Contig_33:288762..291197+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATCCACAGATCTGAAGGTGCTAACGGACTTTATGACAGTCCAGAGGA
CACGACAGGCGGCACGCAGACGGCCATACAGAATCGATACTGCTTCTGGT
ACAAGCAGAAGGGCAACAAGCAGCTGACAACAGAAGACTACGAGAGCAGC
ATCAAGCAACTCGCCAGTTTCCAGACAGTGGAGCATTTCTGGCGCATCTA
CAACCACCTGCAGAGGCCAGATCAAGTGCCCATTGGCACAGACTACCACC
TGTTCAAGGATGGGATTAAGCCGGCGTGGGAAGACAGCCATAATGCTCGC
GGGGGGTTGTGGATGATGCGGCTCAAAAAGGGCTTGGCAAGCAGGCAAGA
GCTGCTGCTGGCTATGATCGGCGAGCAGTTTGACGTGGGGAATGAGATCT
GCGGCGCCGTCATGAGCGTGCGCTACAGCGAGGACGTGGTCTACGTCTGG
AACCGCAACGCCGACAACCGCGAGGCGGCGGACAAGATTCGCGACCAGAT
CCGGCGAATCTTGAAACTGCCAAACTTTGTGCAGCTCGAGTACCGCAGGC
ATCAGGACAGTATGAGCGGACTGGCGGGGGGGAGCCAGGGGGGTCCGGGC
GGGGGGGGGAATCAGGGGCAGCAGCCGGGGGTTTTCAGGGGGGGCTCTTG
GAGCAGGGGGCCGGGGGGCGCTGGGTCACAGAGGTGA
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protein sequence of jgi.p|Trimin1|164764

>Trimin1|164764|e_gw1.33.176.1 ID=Trimin1|164764|e_gw1.33.176.1|Name=jgi.p|Trimin1|164764|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=229bp
MIHRSEGANGLYDSPEDTTGGTQTAIQNRYCFWYKQKGNKQLTTEDYESS
IKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNAR
GGLWMMRLKKGLASRQELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVW
NRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSMSGLAGGSQGGPG
GGGNQGQQPGVFRGGSWSRGPGGAGSQR*
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mRNA from alignment at Contig_33:288762..291197+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5930 ID=mRNA_5930|Name=jgi.p|Trimin1|164764|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2436bp|location=Sequence derived from alignment at Contig_33:288762..291197+ (Tribonema minus UTEX_B_3156 )
ATGATCCACAGATCTGAAGGTGCTAACGGACTTTATGACAGTCCAGAGGA
CACGACAGGCGGCACGCAGACGGCCATACAGAATCGATACTGCTTCTGGT
ACAAGCAGAAGGGCAACAAGCAGCTGACAACAGAAGACTACGAGAGCAGC
ATCAAGCAACTCGCCAGTTTCCAGACAGTGGAGCATTTCTGGCGCATCTA
CAACCACCTGCAGAGGCCAGATCAAGTGCCCATTGGCACAGTAAGTAACA
GCATGCCTCTTATGCTCTGTTGCTAGTGCGGATCATATTTGATAATCATG
TTTTTGAGTAGTTGGTACTTTTTCTTTTCGTCGGACGGCGCACCTGCTTA
GTTCTGCAACGCCTCCTTTCCATTACTGGTCTACTCAAATGCCAACACTG
CTGTGTGTCTGCACACCATCATTTGCATGTTGGTTATCTTTGTCAGCTTT
TGAACCGCTGCTTTGCTCGATGATCGCTCTTCACATGAACACATCAGTAA
TACAGTTGCGCTCTCTGTTATCTTCAGGACTACCACCTGTTCAAGGATGG
GATTAAGCCGGCGTGGGAAGACAGCCATAATGCTCGCGGGGGGTTGTGGA
TGATGCGGCTCAAAAAGGGCTTGGCAAGCAGGCAAGTGCAGAAAACTTCA
AGTTGAACTATCCCACATCGGTGCATACCAGTGTGGTGAAATTGTTATCC
TGCGTGCCGCGTGCATGCTGGGCTCAAGTACTTCTTGTTGTGGCCAGTGC
GCAACTAAGTTGAACCATGCAAATGCCATTTACTAGCAATCTGGCCTGAT
GGTACCTTTTGTCGCTGCTGTGTTGGTTTCATCCATGAACAATGTAACAG
CTGCTTCAGCGCTGTGCACGCAGCCGCACAGCGTCTTGCACATGTTTCAA
GTCGTTTTGTGAGTGGTACATACACATAGCCGTACGTTGGCAACCACTGG
TGTATGAAGCAGTTGTGGTCGTGGTGTGTCGCCTTGGCACTACGATAAAA
GTGTGCTTGGCTCTGCCACTCGAAGTGGAAAGATACCTCCAACACAACAC
CATGGCTGCTGACAAAGTCAATCGGATGTTGCTGTCTACAGATACTGGGA
GGAGCTGCTGCTGGCTATGATCGGCGAGCAGTTTGACGTGGGGAATGAGG
TGAGCTTCTAGGGATAGATTAGGGCTACCACTATGTCTAGCTTCAGGGCA
ATGAGACGAGCTAAGGCGTAAGCCTGAGCTAAGGGGCGTTTAGGCCTAGG
CCAAGGGGGGGGGTTTGAGGCCTAGGCGTTGCCTCCTGTTGCAACCATAC
AGAGGTGGCTGTCAGAGGCGCTTTGGGTATGTAGGTAGTGCTGTTGTGGG
TAGGTAGCGTTTGCTGCTCTGCTCTGGGCTGGGTGCAAATCAGTTACGCA
GCTGTGTAACGGCTTTGCATTGCGGCCCGCAGCAACACCAGAGCGCACAG
CAGTGTGGCAGACGGCCAACATGTCTCACCAGTCCACACTGCATCATCTC
TGATTTCTAGGTGTCACTGCGTCTTACATGAGTCGGCACCGCCATGATTG
TACGCCATGGCCGTCATATGGCCTGTGCCAGCGCACGTGGCTGTTATGAA
ACTGCCCTTTTCTGCTCCAGATCTGTGGCGCCGTGATGAGCATGCGCTGC
AGTGAAAAAAAAAAGGTGTTTTGTGTGACTTTCATGTCACTAGCTGGCTT
GCTGCATCCAACTTGTGCAGCACCGCCTCTGCCACATGTCACAGTCAACA
CAATGTCATGCATCCTGCGAAACGGGGGTTTGTAACTGCCATGTAACCGC
CTGTCTGCCCTCAGATCTGCGGCGCCGTCGTGAGTTTGCGCTACAGCGAG
GACGTCGTTGCGTCTTCAGTAACTGCCATGTTACCGCCCTGCTTGCTGCG
CGCCAGACGAGCTGCGCTGTCACGTCCGTGCGCTACAGCCAACACATCAT
CATGCATGCGCAAAACAGTTTTGTAACTGCCATGTAACCGCCGTCTTGCC
CCCTCAGATCTGCGGCGCCGTCATGAGCGTGCGCTACAGCGAGGACGTGG
TCTACGTCTGGAACCCATCACCATGCATGCATGCATGCGTAACAGTTTTG
TAACTGCCATGTACTTTTTTTTTGCACCCATGCCTGCACCTTCAGATCTG
CGGCGCCGTCATGAGCGTGCGCTACAGCGAGGACGTGGTCTACGTCTGGA
ACCGCAACGCCGACAACCGCGAGGCGGCGGACAAGATTCGCGACCAGATC
CGGCGAATCTTGAAACTGCCAAACTTTGTGCAGCTCGAGTACCGCAGGCA
TCAGGACAGTATGAGCGGACTGGCGGGGGGGAGCCAGGGGGGTCCGGGCG
GGGGGGGGAATCAGGGGCAGCAGCCGGGGGTTTTCAGGGGGGGCTCTTGG
AGCAGGGGGCCGGGGGGCGCTGGGTCACAGAGGTGA
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Coding sequence (CDS) from alignment at Contig_33:288762..291197+

>mRNA_5930 ID=mRNA_5930|Name=jgi.p|Trimin1|164764|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=687bp|location=Sequence derived from alignment at Contig_33:288762..291197+ (Tribonema minus UTEX_B_3156 )
ATGATCCACAGATCTGAAGGTGCTAACGGACTTTATGACAGTCCAGAGGA
CACGACAGGCGGCACGCAGACGGCCATACAGAATCGATACTGCTTCTGGT
ACAAGCAGAAGGGCAACAAGCAGCTGACAACAGAAGACTACGAGAGCAGC
ATCAAGCAACTCGCCAGTTTCCAGACAGTGGAGCATTTCTGGCGCATCTA
CAACCACCTGCAGAGGCCAGATCAAGTGCCCATTGGCACAGACTACCACC
TGTTCAAGGATGGGATTAAGCCGGCGTGGGAAGACAGCCATAATGCTCGC
GGGGGGTTGTGGATGATGCGGCTCAAAAAGGGCTTGGCAAGCAGGCAAGA
GCTGCTGCTGGCTATGATCGGCGAGCAGTTTGACGTGGGGAATGAGATCT
GCGGCGCCGTCATGAGCGTGCGCTACAGCGAGGACGTGGTCTACGTCTGG
AACCGCAACGCCGACAACCGCGAGGCGGCGGACAAGATTCGCGACCAGAT
CCGGCGAATCTTGAAACTGCCAAACTTTGTGCAGCTCGAGTACCGCAGGC
ATCAGGACAGTATGAGCGGACTGGCGGGGGGGAGCCAGGGGGGTCCGGGC
GGGGGGGGGAATCAGGGGCAGCAGCCGGGGGTTTTCAGGGGGGGCTCTTG
GAGCAGGGGGCCGGGGGGCGCTGGGTCACAGAGGTGA
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