mRNA_5897 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164788
Unique NamemRNA_5897
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA)

HSP 1 Score: 455 bits (1170), Expect = 9.920e-162
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1 
Query:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKAAFFGGGG 690
            MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKAAFFGGGG
Sbjct:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKAAFFGGGG 230
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BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 2.370e-97
Identity = 155/232 (66.81%), Postives = 181/232 (78.02%), Query Frame = 1 
Query:    7 GGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLD---KPHEDDAAAAASEISGEKSPAKRGG-----GQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKAAFF 678
            GGVLAGGLHA+SGPDHLAALLPRIMG+ W  +MRIGA WGLGHGFSAT+IGLAAFF KDR+  G G   R ++ +G++TE LVGVSLI IGL+GLKESLLD    P  +  +A ++ + G              G+RAIF NG+LHGFSWDGAPSLAPALA ++W  VLWFLLAYC GTM AMSA TT+IGEGSVRVG+AL+QPDIP++LSVVSS +AI IGAVWL KA FF
Sbjct:    8 GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRL--GLGHNKRLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGXXXXXXXXXXXXXXGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF 237
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BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: A0A4D9DEM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEM4_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.230e-75
Identity = 130/228 (57.02%), Postives = 163/228 (71.49%), Query Frame = 1 
Query:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESL-----LDKPHEDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKA 669
            + GG+LAG LHA++GPDHLAALLPR +GK W  AMRIGAVWGLGHG SA ++G+ AFFLK R+          I KL  YTEVL+GVSLI IGL+GLKE+         P E + + A S  SG    AK+    +A+FLNGLLHGFSWDG P+LAPALA  +W  V+ FL +Y  GTM +MS AT++IGEG+V+VGQAL++P+IPK+L+  SS +AI +G VW VKA
Sbjct:   13 ISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHN--TLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSIAGSAASGA---AKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKA 235
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BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: W7TPT7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT7_9STRA)

HSP 1 Score: 237 bits (605), Expect = 5.670e-74
Identity = 130/229 (56.77%), Postives = 162/229 (70.74%), Query Frame = 1 
Query:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDAAAAASEI------SGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKA 669
            + GG+LAG LHA++GPDHLAALLPR +GK W  AMRIGAVWGLGHG SA ++G+ AFFLK R+          I KL  YTEVL+GVSLI IGL+GLKE+     H D +A    E       SG    AK+    +A+FLNGLLHGFSWDG P+LAPALA  +W  V+ FL +Y  GTM +MS AT++IGEG+V+VGQAL++P+IPK+L+  SS +AI +G VW VKA
Sbjct:  137 ISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHS--TLIPKLSLYTEVLIGVSLIIIGLLGLKEAA----HFDVSAVMPLEAEGSITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKA 359
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BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: A0A7S2Y0T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T2_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.300e-72
Identity = 120/222 (54.05%), Postives = 160/222 (72.07%), Query Frame = 1 
Query:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVK 666
            +GGGVL+G LHAISGPDHLAA++PR +GK W ++M++GA+WGLGHG S  ++GL AF +KD++          IS L T+TE+LVG+SLI IG +G+KES   +  + D AAA  ++  E+   K+ G  ++IF NGLLHG SWDG PSLAPALA TTW  V+ FL AYC G + +MS  T++IGEGSVRVG+  + P IP++LS+ SSG+AI IG +W  K
Sbjct:   93 VGGGVLSGSLHAISGPDHLAAVVPRCIGKRWWISMQVGALWGLGHGVSGLMMGLFAFLVKDKLNLNKS---PMISNLSTWTEILVGLSLILIGFLGVKES---RSFDSDKAAAKEKL--EQESGKKTGSFKSIFFNGLLHGLSWDGTPSLAPALAFTTWRPVVGFLSAYCWGVVVSMSMCTSLIGEGSVRVGR--DNPKIPQQLSMFSSGLAIVIGLLWTGK 304
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BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: K0TLK4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLK4_THAOC)

HSP 1 Score: 216 bits (551), Expect = 1.710e-66
Identity = 116/227 (51.10%), Postives = 149/227 (65.64%), Query Frame = 1 
Query:    7 GGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGR----WISKLGTYTEVLVGVSLITIGLIGLKE-----SLLDKPHEDDAAAAASEIS-GEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVW 657
            GGV +G LHAI+GPDHLAAL+PR  G  W  A R+GA+WGLGHGFSATL+G+A F LK  +   G GG      W    G+  E+ +G+SLI IGL+G+KE     S    P    +AA+   ++     P KR      + LNGLLHGFSWDGAPSLAPA+A ++W G L FLLAY  GTMA M+ ATT+IGEG+ +    L++PD+P+ LSV SS +A+ +G VW
Sbjct:   83 GGVFSGSLHAIAGPDHLAALIPRCCGLKWYSAARVGAIWGLGHGFSATLLGMAGFLLKKGVNLTGFGGFGLGMDWTKHAGSAMELAIGISLIIIGLLGVKEAREWSSPSGSPQSLSSAASPEALAVNPNQPTKR------VLLNGLLHGFSWDGAPSLAPAVAVSSWKGSLTFLLAYAFGTMATMTLATTVIGEGTCKAAGKLDRPDLPRDLSVASSFLALIVGVVW 303
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BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: A0A1Z5K7J2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7J2_FISSO)

HSP 1 Score: 214 bits (545), Expect = 9.320e-66
Identity = 117/228 (51.32%), Postives = 155/228 (67.98%), Query Frame = 1 
Query:    7 GGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDD-----------AAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVW 657
            GG+ AGGLHAI+GPDHLAALLPR  G+ W  A+R+GA+WG+GHG SAT++GL AF LK  +Q    G  + ++     TE+ VG+SLI IG++G++E+   +  E D           +AA   E++ + S  KR     A+  NG+LHGFSWDGAPSLAPA+A  TW G L FL AY  GTM  M+ ATT+IGEG+ + GQ L++PDIP++LS VSS +A+ IGAVW
Sbjct:   72 GGLFAGGLHAIAGPDHLAALLPRCCGQRWYRAVRVGALWGMGHGLSATVLGLTAFGLKSTVQ-NMKGMQKVLAGASHVTEIAVGLSLIVIGVMGIREA---REWEQDLTTTMGASQSLSAAVVDEVASKHSTQKR-----AVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAIGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAMVIGAVW 290
[Close]
BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: A0A7R9ZBQ6_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBQ6_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.000e-65
Identity = 118/224 (52.68%), Postives = 151/224 (67.41%), Query Frame = 1 
Query:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESL-----LDKPHEDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVW 657
            + GGV AGGLHAI+GPDHLAALLPR  G+ W  A RIGA+WG+GHG SAT++G+ AF LK R+   G    R +    ++ E+ VG SL+ IGL+G+KE+      ++       +AAA E  G K   KR     A+  NG+LHGFSWDGAPSLAPA+A  TW G + FLLAY  GTM AM+ ATT+IGEG+ + G+ L +PDIP++LS VSS IAI +G  W
Sbjct:   88 VSGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKSRMSKMGAFS-RVVRGASSFMEIAVGASLVFIGLLGIKEAREWEAEIEGGVPQSLSAAAGE-DGMKVAQKR-----AVVFNGVLHGFSWDGAPSLAPAIAVATWRGNITFLLAYALGTMGAMTIATTLIGEGTRKAGEVLHRPDIPQKLSYVSSIIAIGVGLFW 304
[Close]
BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: A0A7S0BZI7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZI7_9STRA)

HSP 1 Score: 214 bits (544), Expect = 3.680e-65
Identity = 110/222 (49.55%), Postives = 147/222 (66.22%), Query Frame = 1 
Query:    7 GGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKAA 672
            GG+ AGGLHAI+GPDH+AALLPR  GK W +A RIGA+WGLGHG SATL+G+ AFF K+R      G    ++   +  E+ VG+SL+ IG +GLKE++  K    D    +   +   S        R++ LNGL+HG SWDGAPSLAPA+A  TW G L FLL+Y  GT+ AM+ ATT+IGEG+ + G+  E+P+IP++ S  SS  AI +G +W+  AA
Sbjct:  112 GGLFAGGLHAIAGPDHIAALLPRCSGKRWYLAGRIGALWGLGHGISATLLGVIAFFFKNRFSGSMSG---ILTGASSVMEIAVGLSLVVIGAMGLKEAIEWKEQLQDVPPQSLSSAANDSVGVETKSNRSVILNGLIHGLSWDGAPSLAPAIALATWRGSLTFLLSYAMGTIGAMTVATTLIGEGTRKAGEVFERPNIPQQFSFYSSLFAILVGCIWVGLAA 330
[Close]
BLAST of jgi.p|Trimin1|164788 vs. uniprot
Match: A0A7S4J5D2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5D2_9STRA)

HSP 1 Score: 213 bits (541), Expect = 5.180e-65
Identity = 118/224 (52.68%), Postives = 150/224 (66.96%), Query Frame = 1 
Query:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESL-----LDKPHEDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVW 657
            + GGV AGGLHAI+GPDHLAALLPR  G+ W  A RIGA+WG+GHG SAT++G+ AF LK+R+   G      +     + EV VG SL+ IGL+G+KE+      ++       +AAA E  G K   KR     A+  NG+LHGFSWDGAPSLAPA+A  TW G + FLLAY  GTMAAM+  TT+IGEG+ + G+ L +PDIP++LS VSS IAI +G  W
Sbjct:   85 ISGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKNRMSKMGAFS-NIVHGASAFMEVAVGASLVFIGLLGIKEAREWEAEIEGGSPQSLSAAAGE-DGVKVAQKR-----AVVFNGVLHGFSWDGAPSLAPAVAVATWRGNITFLLAYALGTMAAMTITTTLIGEGTRKAGEVLHRPDIPQKLSFVSSIIAIGVGLFW 301
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164788 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVB1_9STRA9.920e-162100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LJP2_ECTSI2.370e-9766.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9DEM4_9STRA1.230e-7557.02Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TPT7_9STRA5.670e-7456.77Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S2Y0T2_9STRA4.300e-7254.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K0TLK4_THAOC1.710e-6651.10Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1Z5K7J2_FISSO9.320e-6651.32Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7R9ZBQ6_9STRA2.000e-6552.68Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A7S0BZI7_9STRA3.680e-6549.55Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4J5D2_9STRA5.180e-6552.68Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:110601..113940 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164788|e_gw1.33.157.1
Preferred nameNIK1
Max annot lvl2759|Eukaryota
EggNOG OGs28N5Y@1|root,2QUR7@2759|Eukaryota
Evalue3.88e-98
Seed ortholog2880.D8LJP2
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-17_002800.1
TranscriptId165110
TrackFilteredModels1
ProteinId164788
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164788gene_5897Tribonema minus UTEX_B_3156 geneContig_33 110601..113940 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164788Trimin1|164788|e_gw1.33.157.1Tribonema minus UTEX_B_3156 polypeptideContig_33 110601..113940 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5897_2exon_5897_2Tribonema minus UTEX_B_3156 exonContig_33 110601..111186 -
exon_5897_1exon_5897_1Tribonema minus UTEX_B_3156 exonContig_33 113834..113940 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5897CDS_5897Tribonema minus UTEX_B_3156 CDSContig_33 113834..113940 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5897 ID=mRNA_5897|Name=jgi.p|Trimin1|164788|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=693bp|location=Sequence derived from alignment at Contig_33:110601..113940- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGGGAGGTGTGCTTGCGGGAGGGCTGCATGCCATATCAGGGCCGGA
TCACTTGGCGGCTCTGCTGCCTCGCATCATGGGGAAGGCTTGGCCGGTTG
CTATGAGGATCGGCGCAGTGTGGGGATTAGGCCACGGCTTCAGCGCCACC
CTGATAGGACTGGCCGCTTTCTTCCTCAAGGATAGAATACAGGCGGGCGG
CGGCGGCGGCGGCCGCTGGATCTCCAAACTGGGCACCTACACGGAGGTAC
TCGTGGGCGTATCTCTCATAACCATCGGTCTCATTGGCCTCAAAGAGTCG
CTGCTAGACAAGCCGCACGAAGACGACGCCGCGGCGGCCGCCTCAGAAAT
TTCCGGGGAAAAGTCTCCGGCAAAGCGGGGCGGCGGTCAGCGCGCCATCT
TCCTTAACGGGCTTTTGCACGGTTTTTCGTGGGATGGTGCACCGTCGCTA
GCGCCGGCGCTCGCGTGCACTACGTGGCATGGCGTGCTGTGGTTTCTGCT
GGCCTACTGCGGCGGGACCATGGCGGCTATGTCCGCTGCAACGACGATCA
TCGGCGAAGGGAGCGTAAGGGTGGGGCAGGCGCTGGAGCAGCCTGACATT
CCCAAGCGGTTGAGCGTTGTCAGCAGCGGCATCGCGATTGCGATTGGTGC
CGTGTGGCTGGTGAAGGCGGCGTTCTTTGGCGGAGGGGGATAG
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protein sequence of jgi.p|Trimin1|164788

>Trimin1|164788|e_gw1.33.157.1 ID=Trimin1|164788|e_gw1.33.157.1|Name=jgi.p|Trimin1|164788|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=231bp
MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSAT
LIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKES
LLDKPHEDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSL
APALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDI
PKRLSVVSSGIAIAIGAVWLVKAAFFGGGG*
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mRNA from alignment at Contig_33:110601..113940-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5897 ID=mRNA_5897|Name=jgi.p|Trimin1|164788|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3340bp|location=Sequence derived from alignment at Contig_33:110601..113940- (Tribonema minus UTEX_B_3156 )
ATGGGGGGAGGTGTGCTTGCGGGAGGGCTGCATGCCATATCAGGGCCGGA
TCACTTGGCGGCTCTGCTGCCTCGCATCATGGGGAAGGCTTGGCCGGTTG
CTATGAGGTGAGTTCCAAACATACACGTGGCAGGCACCTCGTTCAAGCAC
TTCAGCGTACACAATGCGCGAAGGTGAAAAACTAGCACGATCTGCACCAT
TTTGCGCTTACCGCCGTTTTACGGTGTATGCACGCTGCCGGCTCGCCGGC
CAGACAGACTGGCAGCGCACCCGCCCTGTTGAGCATTCCAGTATCAAAGC
TGGTTTCAATTATGGGAGCTGAAGCTGGCCTACGCGCGGGATGCATGCGC
AAACACTGCAGTCCAGATCACTTAAATACATACTCACGCTGAAGCTGGGT
GTCCCACGCGCGAGCAGGTGTCGTGTGAGAGCTTCAGTCCAGCAACGTGC
AGTAGCAACAGGCAATGACCAGTTGCACCTGCCTTCGGGCGGCGTCTTCA
TCTGGCACCAACAAGATGCTCGTACTTAGAAAACACCTGGCGTGCCATGC
ACATCACCCTGCATGAGGCAAAGACTTCAAGTGCCAGCAACACTGGCCGA
GATGAGCTGTTGCTGGCTGCGATGCATGGCTCAGCTGCAGCACTTGAACT
TTCTGAGCCATGGAATGTGTTCGTTTCAGACTAATAGCCTTCTCAATGCA
ATCGCAGCAGATGTTGCGCAGCAGCTCGCAGAACATCCGTCTTCAACCAG
TGAGAGGTGGTTGGTGACTGCCAGCTGCTGCTTGACAAAGAGGCACATTG
TGAGCCAGTGTGACATGTTGCGATGGTGGTGACGGCCACTCTGCAGCAGC
CGATGCTTCATATAGCGTCTTCAAGACGTGGAGCCACTACGCACTAGATT
TGCTGTCCTGGTGGGCAAACTTCAACTTCAACCTCATCCGGCCGCGTTCG
CCAACAGGGCCGTATGTGGCGTGGCTGCATTGTTTGCAAGCATGAAAAGG
CATAGGTGATATGATACCTTGAAGCCTGTTAATGAAGACGAACTCCGCCA
GAGCGTGAACTGTAACTGCAGATATATATGATCACATTGAGATCATCACA
TGGCATTCATGACGTGCGCCCAGCCTTCAATTAACATCTGGTGCGGCAGT
TGCAACTCCACAACCATATGGTTCTGGGTGCTATAACTACCAGCAGCAGC
ATACATGCGTCTCTGAAGCTGCAAGCATTTACAACGACAACTATCCAGTG
GCGTAGCCAGAGTGGTCATCGGCCACAGTGGGCTGCCCTGGCTGCCGCCA
TCGCTGCTTATATTGACGATTATCAATTTCTCACTCTCACCAGTGTGCCT
GAGTACGGGAAGCCGGCGTCATGGCAATGGTAACATGTGTTTACAGCAGG
ACCAGCTCACTCAAGCCTCAAGTGAGCTGCATTGCGCCATCTCACATAGC
CCAGTAAACTTGGCGAAGACTTCTTTTGCACATAAGGCTTACTCTTCAAG
CGATGGACCGAGCAGCCACGTTCAGGAGGGCTAGGTCTTGTGCGTACTGT
GACCACAGCAGTGATGCATGCATTACATCTTCAACTTCAACCACTCCCTG
GACGTTGTGCCAGCCTTGTAGCGTTCATGATCATCGCATTGGCACGCGAC
CATTGTGATCAGGGTGGCTTCAGTGTGACACGTCAATTCACCCTGAAACA
AGCTGAGTCAGAGTTTTTGTGCTTCGCTTGGTATCGACTTTATTCTGCTG
GTGTGGAGTTCGTATTCAGCACTCAGCACAACACACACTGTCTGCACACT
TACAAAGCCAACACGACAAGCCCTCGTCAGCACAGGTGCTCAGCTCTATG
TCTTCAGAGAAATTCAAAGAATGCCTCAAGACAGTTGCTAACAGGTGTTG
TATGCTCCTTTTGTTGAGGCTGGAGAGTATCGCGTGTGTTGGCAGGCCAA
AGTAAGGCCGCGCTCAAGATGAGCAAATGCCAGCGCTGACAAGAAGTCTT
CATTGATGACAGCCGTGCTGCTTGTTCACTCAGTGATGCTGTGAAGCAGC
CCTGGTGGCACTAGTAAGGCAGGACTGATGGCATCTTCACTGCATAACTG
CAGTGTGCCTCTCACGGAAATGCATGATAGGCACCTTGTTGCCTGCCGCC
TCTCATGACGCTCTGACTCGCATGACACTGGCAGTGTTGCGGCGCAAGCG
CAGCCCTCAGCATATATAACTCGACAACGCTCAGCACACGACCATGCCTC
AACAAGTAGGTGCCACTGCTCAACATGATGTCACGCAATAAGCTGCATGT
ACCACAAGTTTGCCTCATTAACCATCTAGCATGAGTGCCGCAAAATCAGT
ACTCTGTTGCTGCCCACAATCGACAACTCAGTGACAGACGAACCACGGGG
TGTGTTAACTTCAATAGTCCGCGTCACAAAAAAGAGCTTCCAAACCACTC
TTAGTGGATGTCACGGTCAGACGTTTGAACTGTGCTGCAGCTGTTCTTGG
TCTATTGATGTTTCAGTACGCATGAAGCCTTGTTTGATGTAGGCATTAAC
TTTGACGTGTGATTCTGTTTTGCCCCTACTTAGAGATCTCATGTTCACCG
GTGACAGCATGCCTGTGTGTGCAAGCTGCTCGCATATCCAAGGCTCTCAC
AACCGCATTATTTACAACAATCAAGTCGTAGTTTACATTGTTGTTGAGGA
TTGACCATGACATTCACCACGCGCGCATGTTGCTCGCTCATCTCTACGTG
ACAGGATCGGCGCAGTGTGGGGATTAGGCCACGGCTTCAGCGCCACCCTG
ATAGGACTGGCCGCTTTCTTCCTCAAGGATAGAATACAGGCGGGCGGCGG
CGGCGGCGGCCGCTGGATCTCCAAACTGGGCACCTACACGGAGGTACTCG
TGGGCGTATCTCTCATAACCATCGGTCTCATTGGCCTCAAAGAGTCGCTG
CTAGACAAGCCGCACGAAGACGACGCCGCGGCGGCCGCCTCAGAAATTTC
CGGGGAAAAGTCTCCGGCAAAGCGGGGCGGCGGTCAGCGCGCCATCTTCC
TTAACGGGCTTTTGCACGGTTTTTCGTGGGATGGTGCACCGTCGCTAGCG
CCGGCGCTCGCGTGCACTACGTGGCATGGCGTGCTGTGGTTTCTGCTGGC
CTACTGCGGCGGGACCATGGCGGCTATGTCCGCTGCAACGACGATCATCG
GCGAAGGGAGCGTAAGGGTGGGGCAGGCGCTGGAGCAGCCTGACATTCCC
AAGCGGTTGAGCGTTGTCAGCAGCGGCATCGCGATTGCGATTGGTGCCGT
GTGGCTGGTGAAGGCGGCGTTCTTTGGCGGAGGGGGATAG
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Coding sequence (CDS) from alignment at Contig_33:110601..113940-

>mRNA_5897 ID=mRNA_5897|Name=jgi.p|Trimin1|164788|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=693bp|location=Sequence derived from alignment at Contig_33:110601..113940- (Tribonema minus UTEX_B_3156 )
ATGGGGGGAGGTGTGCTTGCGGGAGGGCTGCATGCCATATCAGGGCCGGA
TCACTTGGCGGCTCTGCTGCCTCGCATCATGGGGAAGGCTTGGCCGGTTG
CTATGAGGATCGGCGCAGTGTGGGGATTAGGCCACGGCTTCAGCGCCACC
CTGATAGGACTGGCCGCTTTCTTCCTCAAGGATAGAATACAGGCGGGCGG
CGGCGGCGGCGGCCGCTGGATCTCCAAACTGGGCACCTACACGGAGGTAC
TCGTGGGCGTATCTCTCATAACCATCGGTCTCATTGGCCTCAAAGAGTCG
CTGCTAGACAAGCCGCACGAAGACGACGCCGCGGCGGCCGCCTCAGAAAT
TTCCGGGGAAAAGTCTCCGGCAAAGCGGGGCGGCGGTCAGCGCGCCATCT
TCCTTAACGGGCTTTTGCACGGTTTTTCGTGGGATGGTGCACCGTCGCTA
GCGCCGGCGCTCGCGTGCACTACGTGGCATGGCGTGCTGTGGTTTCTGCT
GGCCTACTGCGGCGGGACCATGGCGGCTATGTCCGCTGCAACGACGATCA
TCGGCGAAGGGAGCGTAAGGGTGGGGCAGGCGCTGGAGCAGCCTGACATT
CCCAAGCGGTTGAGCGTTGTCAGCAGCGGCATCGCGATTGCGATTGGTGC
CGTGTGGCTGGTGAAGGCGGCGTTCTTTGGCGGAGGGGGATAG
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