mRNA_5807 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347565
Unique Name	mRNA_5807
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: A0A835ZAT8_9STRA (Splicing factor, Prp19-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT8_9STRA)

HSP 1 Score: 1016 bits (2626), Expect = 0.000e+0
Identity = 646/650 (99.38%), Postives = 646/650 (99.38%), Query Frame = 2

Query:  140 MEFTKRDLALLLPDQVGDAASLRFTADASADAAPAEMLKPRIDPTKKVVIYRAGQVPNFGANHQDEEGGTRRRRKGWDKGATQAAVAPSAGEGAGVGALLEGFGPLSVEEQDDXXXXXXXXRSKARXRARLVVEAEVIEGSASESDGELEGAYQKGAGKRRDADETPVEGDVAVGQADEQXXXXXXXXXXXXXXXXXXXXAASAGPDKAAEEAKARQRAEAAVLEEPGGAEEEEGEXXXXXGSDEWETDSESESEADXXXXXXXXXXXXXXXXXXXVALLKPVFVPREKRETLLQAKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVAVLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVDAPFRRXXXXXXXXXXXXXXQMPLPPPHYHVG 2089
            MEFTKRDLALLLPDQVGDAASLRFTADASADAAPAEMLKPRIDPTKKVVIYRAGQVPNFGANHQDEEGGTRRRRKGWDKGATQAAVAPSAGEGAGVGALLEGFGPLSVEEQDDXXXXXXXXRSKARXRARLVVEAEVIEGSASESDGELEGAYQKGAGKRRDADETPVEGDVAVGQADEQXXXXXXXXXXXXXXXXXXXXAASAGPDKAAEEAKARQRAEAAVLEEPGGAEEEEGEXXXXXGSDEWETDSESESEADXXXXXXXXXXXXXXXXXXXVALLKPVFVPREKRETLLQAKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVAVLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVDAPFRRXXXXXXXXXX    QMPLPPPHYHVG
Sbjct:    1 MEFTKRDLALLLPDQVGDAASLRFTADASADAAPAEMLKPRIDPTKKVVIYRAGQVPNFGANHQDEEGGTRRRRKGWDKGATQAAVAPSAGEGAGVGALLEGFGPLSVEEQDDXXXXXXXXRSKARXRARLVVEAEVIEGSASESDGELEGAYQKGAGKRRDADETPVEGDVAVGQADEQXXXXXXXXXXXXXXXXXXXXAASAGPDKAAEEAKARQRAEAAVLEEPGGAEEEEGEXXXXXGSDEWETDSESESEADXXXXXXXXXXXXXXXXXXXVALLKPVFVPREKRETLLQAKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVAVLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVDAPFRRXXXXXXXXXXHDYQQMPLPPPHYHVG 650

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: A0A7S2CP46_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP46_9STRA)

HSP 1 Score: 154 bits (388), Expect = 6.250e-39
Identity = 119/329 (36.17%), Postives = 160/329 (48.63%), Query Frame = 2

Query: 1025 AKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVAVLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVDAPFRR 2011
            AKA ++  R RA   A +LE++K ETR +VAE+IRRD+E+    +DG  SD  +P DTDD D                         P   EAWKVRE+QR+ RD++ R    +E+AETERRR LT+++R  ED  LGK   ++K KWKFMQKYYH+                                                 G FYMDE  + D  DVR R+  GAT +DKF+ +A+PKVMQ                             V  FG SGQTK+THL  +DTT+   P+   ++ +R+  +SKMAG GD+D+  R+
Sbjct:    7 AKAAQEEERERAR--AAQLEKRKAETRNMVAEQIRRDEEQVENHVDGNDSDANMPSDTDDLDD------------------------PMAYEAWKVRELQRVKRDRDLRLVHEQEKAETERRRGLTDEQRAAEDAALGKNKVEDKGKWKFMQKYYHK-------------------------------------------------GAFYMDETEM-DAEDVRKREFDGATLDDKFDKQALPKVMQ-----------------------------VKKFGFSGQTKYTHLKDQDTTDFDNPWNQKNQ-LRANYDSKMAGVGDIDSAGRK 229

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: A0A7S2SCR4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCR4_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.170e-37
Identity = 121/352 (34.38%), Postives = 172/352 (48.86%), Query Frame = 2

Query:  974 LLKPVFVPREKRETLLQAKALE--DAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSV----AVLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVDAPFRR 2011
            LLKPVFVPR KR T+ + +  E  +A+R   H+ A  LE++K ETR +VAE++RR+ ++ +    ++  G  SD  +P DTDD D                         P    +W++RE+QR+ RD + R A   ++AETERRRNLT+ ER  ED  LGK A K+K KW+FMQKYYH+                                                 G FYMD++++ D+ DVR R    AT EDKF+ +A+PKV+Q                             V  FG +G+TK+THLA +DTT+   P+ M    +R K +SK++G GD+D   R+
Sbjct:   54 LLKPVFVPRTKRGTVAEREMQEKREASRQLIHEAA--LEQRKIETRNMVAEQVRREDDEGMLEPGSIGGGNDSDAGMPSDTDDADD------------------------PVVFASWRLREIQRVKRDVDARRAFDLDKAETERRRNLTDAERAAEDAALGKNAEKDKEKWRFMQKYYHK-------------------------------------------------GAFYMDDETM-DKNDVRKRSYGEATLEDKFDKQALPKVLQ-----------------------------VKKFGFAGRTKYTHLADQDTTDWNNPW-MQKSNLREKYDSKLSGVGDIDRAGRK 299

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: A0A7S2CMS0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMS0_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.860e-34
Identity = 127/383 (33.16%), Postives = 172/383 (44.91%), Query Frame = 2

Query:  866 SDEWET-DSESESEADXXXXXXXXXXXXXXXXXXXVALLKPVFVPREKRETLLQAKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVAVLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVDAPFRR 2011
            S EWET  SESE E+                      L+KPVFV R KR T+L+A+        +    A +LE++K ETR +VAE+IRR+++     +    SD  +P DTDD D                         P   EAWKVRE+QRLTRD   +E + +E+ ETERRR LT+++R  ED  LGK   ++K+KWKF+QKYYH+                                                 G FYMD D   ++ DVR R     T EDKF+  A+P+VMQ                             V  FG +GQTK+THL  +DTT    P+ M +  +R   +SKM+G GD+D+  R+
Sbjct:  178 SSEWETGSSESEEESQ---------------------LMKPVFVSRNKRATILEAERKVKVEETKRKAAAVKLEQRKIETRNMVAEKIRREEQMVENQVGDNDSDDNMPSDTDDLDD------------------------PVAYEAWKVRELQRLTRDNAIKEKMKKEKEETERRRALTDEQRGAEDLALGKVKTEDKAKWKFLQKYYHK-------------------------------------------------GAFYMD-DEEHEKKDVRQRKYDQPTLEDKFDKAALPRVMQ-----------------------------VKKFGFAGQTKYTHLLDQDTTEWDSPW-MQNSALRQTTDSKMSGLGDIDSGGRK 435

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: D7FYL5_ECTSI (MFAP1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL5_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.800e-31
Identity = 99/280 (35.36%), Postives = 124/280 (44.29%), Query Frame = 2

Query: 1172 SDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVDAPFRR 2011
            S+G+ PDD DD D  L  E WK                        VRE+ R+ ++KEERE+  +ER +T RRRN+T+DERR ED  LGK  GK+K   KFMQKYYH+                                                 G FYMD+DS+K   DVR R     T EDKF+   MPK MQ                             V NFGRSGQTKWTHLA EDTT     +      + +K++ KM+G G++DA F+R
Sbjct:   11 SEGDAPDDDDDLDEELAFEEWK------------------------VRELSRVRKEKEERESAIKEREDTLRRRNMTDDERRMEDMMLGKHVGKDKGTIKFMQKYYHK-------------------------------------------------GAFYMDDDSLKVEDDVRRRSYNEPTLEDKFDKTQMPKPMQ-----------------------------VKNFGRSGQTKWTHLANEDTTQWDSAWAQETH-VATKMQHKMSGVGNIDAAFKR 187

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: A0A8K1CUC0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUC0_PYTOL)

HSP 1 Score: 138 bits (347), Expect = 3.680e-31
Identity = 130/395 (32.91%), Postives = 173/395 (43.80%), Query Frame = 2

Query:  818 PGGAEEEEGEXXXXXGSDEWETDSESESEADXXXXXXXXXXXXXXXXXXXVALLKPVFVPREKRETLLQAKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVAVLDGGGSDGELPDDTD--DPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVD 1996
            P  A +EE E     GS EWETDS+  +E +                    AL+KPVFVP++ RET+ + + L+     R      + + KK ETR+LVAEE++R++E       G  +D E+PDDTD  DP+                           E   W++REM+             +E  ET RRRN+TE+        L K A KEKSKWKFMQKYYH+                                                 G FYMD+ SV+++ DVR RD +GAT ED FN E MP VMQ                             V NFG+SG+TK+THLAAEDT+     +  +D  IR K  S+++GT D+D
Sbjct:  194 PSMARKEETESSGESGS-EWETDSDESNEGE--------------------ALMKPVFVPKKARETIKRQEELDAEEEKRRXXXXXKAQAKKLETRKLVAEELQREKEGEQT---GDMTDTEMPDDTDGLDPEQ--------------------------EYRDWELREMRXXXXXXXXXXXXRKEAEETLRRRNMTEEXXXXXXXXLKKNAPKEKSKWKFMQKYYHK-------------------------------------------------GAFYMDDTSVREKEDVRKRDASGATLEDNFNKEMMPSVMQ-----------------------------VKNFGKSGRTKYTHLAAEDTSKKDSLWGRND-AIREKFRSRLSGTRDLD 459

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: A0A4D9DAP2_9STRA (MFAP1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAP2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.670e-29
Identity = 123/369 (33.33%), Postives = 160/369 (43.36%), Query Frame = 2

Query:  971 ALLKPVFVPREKRETLLQAKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVA---VLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKG-----AGK-EKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMS-------DRTI------RSKLESKMAGTGDVDAPFRR 2011
            AL +PVF+P+ KRE                       E ++RETR +VAEE+R++ E +V     ++G GSD   PDD+D P+                      DA   E E W++RE+ R+ R+ E R+A  +++AE  RRR +TE ER  EDR LG G      GK EK+KWKFMQKYYH+                                                 G FYMDE+SV    DVR R    ATGEDKFN  A+P VMQ                             V NFGR+GQTK+THL  +DTT   +    S       D+        ++K   K+AGTGD+D   RR
Sbjct:  252 ALARPVFIPKGKRELDRXXXXXXXXXXXXXXXXXXARESRRRETRLMVAEEVRKEAEGAVGSGGAMEGYGSDAGAPDDSDRPEE---------------------DAL--EFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGMYAKQGGKGEKAKWKFMQKYYHK-------------------------------------------------GAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQ-----------------------------VKNFGRAGQTKYTHLLDQDTTRAEKHKTESVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDIDQAGRR 519

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: A0A024GTI8_9STRA (MFAP1 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTI8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.010e-27
Identity = 102/342 (29.82%), Postives = 155/342 (45.32%), Query Frame = 2

Query:  971 ALLKPVFVPREKRETLLQAKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVAVLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVD 1996
            +L+KPVF+PR+ R+T     A++     +  K+A++L  +K+ET++LV  E++  Q +   + D                                           E +AW++RE++R+ RD+++     ++R ET+RRRNLTE+ER+ EDR+L K   KEK KWKF+QKYYH+                                                 G FY+D+DSV+   DVR RD +GAT EDK N E +P VMQ                             V NFGR+G+TK+THL  +DTT     +  +D  IR+K  +K+ G  +++
Sbjct:  216 SLMKPVFIPRDARKTHSLQLAIDQNYDQQQQKEAEKLALRKKETKKLVLSEVQLKQTEKTDLTDXXXXXXXXX-----------------------------XXXXEEYKAWEIRELKRIKRDRDQAVRQEQDRQETQRRRNLTEEERQAEDRKLKKNEPKEKKKWKFLQKYYHK-------------------------------------------------GAFYVDDDSVQKNEDVRKRDTSGATLEDKHNKEILPIVMQ-----------------------------VKNFGRAGRTKYTHLVDQDTTGRDSLWTKNDE-IRAKYSTKIGGVRNLE 449

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: A0A5D6XW28_9STRA (MFAP1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW28_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.260e-27
Identity = 88/240 (36.67%), Postives = 121/240 (50.42%), Query Frame = 2

Query: 1292 ELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEPFLMSDRTIRSKLESKMAGTGDVDAPFRR 2011
            E   W++REM+R+ RD++ +E   +E  E  RRRN+TE+ER+ EDR+L K    EK+KWKFMQKY+H+                                                 GVFY+DE SVKD+ DVR RD +GAT EDKFN E +PKVMQ                             V NFGRSGQTK+THLA +DT++    +  +D +IR K ++K++G  D++   +R
Sbjct:  317 EYRDWELREMRRIKRDRDRKEQKRQEAEEILRRRNMTEEERQAEDRKLKKDVRTEKAKWKFMQKYHHK-------------------------------------------------GVFYVDETSVKDKDDVRRRDVSGATLEDKFNKEMLPKVMQ-----------------------------VKNFGRSGQTKYTHLADQDTSHRDSLWARND-SIREKFKNKLSGVRDIEGSLKR 477

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BLAST of jgi.p|Trimin1|347565 vs. uniprot
Match: W7TVS7_9STRA (Micro-fibrillar-associated 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVS7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 8.670e-27
Identity = 120/369 (32.52%), Postives = 155/369 (42.01%), Query Frame = 2

Query:  971 ALLKPVFVPREKRETLLQAKALEDAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVA---VLDGGGSDGELPDDTDDPDSILQLEAWKXXXXXXXXXAGARDAAPHELEAWKVREMQRLTRDKEEREALARERAETERRRNLTEDERRREDRELGKGA-----GK-EKSKWKFMQKYYHQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQRAGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFLRGHVXXXXXXXXXXXXXXXXVHNFGRSGQTKWTHLAAEDTTNLAEP-----FLMSDRTIR--------SKLESKMAGTGDVDAPFRR 2011
            AL +PVF+P+ KRE                       E ++RETR +VAEE+R++ E +V           D   PDD+D P+                      DA   E E W++RE+ R+ R+ E R+A  +++AE  RRR +TE ER  EDR LG G      GK EK+KWKFMQKYYH+                                                 G FYMDE+SV    DVR R    ATGEDKFN  A+P VMQ                             V NFGR+GQTK+THL  +DTT   +      +   D+  R        +K   K+AGTGD+D   RR
Sbjct:  112 ALARPVFIPKGKRELDRXXXXXXXXXXXXXXXXXXARESRRRETRLMVAEEVRKESEGAVGSXXXXXXXXXDAGAPDDSDRPEE---------------------DAL--EFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHK-------------------------------------------------GAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQ-----------------------------VKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDIDQAGRR 379

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347565 vs. uniprot

BLAST of jgi.p|Trimin1|347565 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZAT8_9STRA	0.000e+0	99.38	Splicing factor, Prp19-binding domain-containing p...	[more]
A0A7S2CP46_9STRA	6.250e-39	36.17	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S2SCR4_9STRA	1.170e-37	34.38	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2CMS0_9STRA	3.860e-34	33.16	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
D7FYL5_ECTSI	1.800e-31	35.36	MFAP1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A8K1CUC0_PYTOL	3.680e-31	32.91	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A4D9DAP2_9STRA	4.670e-29	33.33	MFAP1 domain-containing protein n=1 Tax=Nannochlor...	[more]
A0A024GTI8_9STRA	1.010e-27	29.82	MFAP1 domain-containing protein n=1 Tax=Albugo can...	[more]
A0A5D6XW28_9STRA	3.260e-27	36.67	MFAP1 domain-containing protein n=1 Tax=Pythium br...	[more]
W7TVS7_9STRA	8.670e-27	32.52	Micro-fibrillar-associated 1 n=1 Tax=Nannochlorops...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_13	contig	Contig_13:645040..655696 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347565\|estExt_Genemark1.C_Ctg_130059
Description	ENSANGP00000028298. Source PGD
COG category	Z
Max annot lvl	121069\|Pythiales
EggNOG OGs	KOG1425@1\|root,KOG1425@2759\|Eukaryota,1MDDV@121069\|Pythiales
Evalue	3.82e-40
Seed ortholog	65071.PYU1_T006925
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Splicing factor, Prp19-binding domain containing protein
Ec32 ortholog	Ec-26_002680.1
TranscriptId	347887
Track	FilteredModels1
ProteinId	347565

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347565	gene_5807	Tribonema minus UTEX_B_3156	gene	Contig_13 645040..655696 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347565	Trimin1\|347565\|estExt_Genemark1.C_Ctg_130059	Tribonema minus UTEX_B_3156	polypeptide	Contig_13 645127..655557 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5807_17	exon_5807_17	Tribonema minus UTEX_B_3156	exon	Contig_13 645040..645288 -
exon_5807_16	exon_5807_16	Tribonema minus UTEX_B_3156	exon	Contig_13 645959..646039 -
exon_5807_15	exon_5807_15	Tribonema minus UTEX_B_3156	exon	Contig_13 647136..647222 -
exon_5807_14	exon_5807_14	Tribonema minus UTEX_B_3156	exon	Contig_13 647424..647543 -
exon_5807_13	exon_5807_13	Tribonema minus UTEX_B_3156	exon	Contig_13 647926..647974 -
exon_5807_12	exon_5807_12	Tribonema minus UTEX_B_3156	exon	Contig_13 648105..648202 -
exon_5807_11	exon_5807_11	Tribonema minus UTEX_B_3156	exon	Contig_13 648285..648488 -
exon_5807_10	exon_5807_10	Tribonema minus UTEX_B_3156	exon	Contig_13 648601..648636 -
exon_5807_9	exon_5807_9	Tribonema minus UTEX_B_3156	exon	Contig_13 648769..648786 -
exon_5807_8	exon_5807_8	Tribonema minus UTEX_B_3156	exon	Contig_13 648933..648950 -
exon_5807_7	exon_5807_7	Tribonema minus UTEX_B_3156	exon	Contig_13 649426..649540 -
exon_5807_6	exon_5807_6	Tribonema minus UTEX_B_3156	exon	Contig_13 650782..650972 -
exon_5807_5	exon_5807_5	Tribonema minus UTEX_B_3156	exon	Contig_13 651137..651190 -
exon_5807_4	exon_5807_4	Tribonema minus UTEX_B_3156	exon	Contig_13 651738..651908 -
exon_5807_3	exon_5807_3	Tribonema minus UTEX_B_3156	exon	Contig_13 653051..653181 -
exon_5807_2	exon_5807_2	Tribonema minus UTEX_B_3156	exon	Contig_13 654302..654554 -
exon_5807_1	exon_5807_1	Tribonema minus UTEX_B_3156	exon	Contig_13 655393..655696 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_5807	UTR3_5807	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_13 645040..645126 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5807	CDS_5807	Tribonema minus UTEX_B_3156	CDS	Contig_13 655393..655557 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_5807	UTR5_5807	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_13 655558..655696 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_13:645040..655696-
coding sequence from alignment at Contig_13:645040..655696-

spliced messenger RNA

>mRNA_5807 ID=mRNA_5807|Name=jgi.p|Trimin1|347565|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2179bp|location=Sequence derived from alignment at Contig_13:645040..655696- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGAGTGTGGGCTGTCGTTGTCAAGAAGGCGCCTCTTGTGGCGACTCCAGA
GCCCATTTGGCTCAGGCGGAGTGAATTTGTGCAAAGCAGGAATCAGGCGA
AGCAGAGGAGCTCAGCCCTAAGCTTGGCTACACAGCATCATGGAGTTCAC
AAAGAGGGATTTGGCGCTGCTGCTGCCGGATCAGGTTGGGGATGCCGCCA
GTCTTCGGTTCACGGCGGATGCATCCGCGGACGCAGCTCCGGCTGAGATG
CTGAAGCCCAGGATCGATCCCACAAAGAAAGTGGTCATTTACAGGGCGGG
TCAGGTGCCAAACTTTGGTGCGAACCACCAAGACGAGGAGGGCGGCACGC
GGCGTCGGAGAAAGGGCTGGGACAAGGGGGCGACCCAGGCAGCGGTGGCG
CCCTCTGCAGGGGAGGGGGCGGGGGTGGGGGCTCTGCTGGAGGGGTTTGG
ACCGCTGAGCGTTGAGGAGCAGGACGATGAGGAGCGGAGGCGTGCTGCGG
CCAGGTCGAAGGCGCGGGCGCGCGCGCGGCTCGTCGTCGAAGCTGAAGTT
ATAGAAGGGAGCGCGAGCGAGAGCGATGGGGAGCTTGAGGGGGCCTATCA
AAAGGGCGCCGGCAAGCGCAGGGACGCGGATGAGACGCCTGTGGAGGGGG
ACGTTGCAGTTGGCCAGGCAGACGAGCAGGAGGAAGAGGAGGAGGACGTG
GCAGCGCGACGCGCCAGGATCCGCGCGCGCTTGCGCGCCGCCGCGTCCGC
TGGCCCCGATAAGGCCGCCGAGGAAGCCAAGGCGCGCCAAAGGGCGGAGG
CGGCCGTGCTGGAGGAGCCAGGGGGGGCAGAGGAGGAGGAGGGGGAGGAG
GAAGGGGAGGAGGGCAGCGACGAGTGGGAGACAGACTCTGAGTCTGAGTC
TGAGGCGGACGAGGAGGGCAGCGACGAGTGGGAGACAGACTCTGAGTCTG
AGGCGGAGGCGGACGAGGTGGCGCTGCTGAAGCCCGTCTTTGTCCCACGC
GAGAAGCGCGAGACGCTGCTGCAGGCCAAGGCGCTGGAGGACGCGGCGCG
CGCGCGCGCGCACAAGGACGCGCAGGAGCTGGAGCGCAAGAAGCGCGAAA
CGAGGCAACTCGTCGCCGAGGAGATCAGGCGCGATCAGGAGAAGTCAGTG
GCAGTGCTCGACGGCGGCGGCAGCGATGGCGAGCTGCCAGACGACACCGA
CGATCCCGACAGCATACTGCAGCTGGAGGCCTGGAAGGAGCTGGAGGCCT
GGAAGGAGCTGGAGGCAGGTGCGCGGGATGCAGCGCCTCACGAGCTGGAG
GCCTGGAAGGTGCGCGAGATGCAGCGCCTCACGCGCGACAAGGAGGAGCG
CGAGGCCCTCGCGCGCGAGCGCGCGGAGACGGAGCGGCGCCGCAATCTGA
CGGAGGACGAGCGCCGCCGCGAGGACAGGGAGCTCGGCAAGGGCGCCGGC
AAGGAGAAGAGCAAGTGGAAGTTCATGCAGAAGTACTACCACCAGTGCTG
GTGCGCAGCGAGCGGCGCGGCGCGTTCTTGGCGCATGCGTGCCGCGGACA
TTGCGTGTGGGGATGGCGTCGTTGTCAATGCGCCGGCGGCAGCGGCGTGC
GCCGCGTGCCGGCTGCTGAGGCGCGCCGCAACGCAGCGTGCGGGCGTGTT
CTACATGGACGAGGACTCCGTCAAAGACCGGGGCGACGTGCGCCTGCGCG
ACAACACGGGCGCCACGGGTGAGGACAAGTTCAACATGGAGGCCATGCCC
AAAGTCATGCAGGTGCCCGATCTACTGTTGAACTTCCTAAGGGGGCATGT
AACGGGCGAGGACAAGTTCAACATGGAGGCCATGCCCAAAGTGCTGCAGG
TCCACAACTTTGGCCGCAGCGGGCAGACCAAGTGGACGCACCTCGCGGCG
GAGGACACCACCAATCTGGCGGAGCCATTCCTCATGTCCGACCGCACGAT
ACGCTCCAAGCTGGAGAGCAAAATGGCGGGCACCGGCGACGTGGACGCCC
CCTTCCGACGGCGGCGCGGCGGCGGCGGCGGCGGCGACCAACACGACTAC
CAGCAGATGCCGCTGCCGCCGCCGCACTATCACGTGGGCTGATGTTGTGC
CGCACTCGAGCGGCATCACACGTATTGCTAGGTAGATCACAGAGCACTGC
ATAATACATGTGCCGCGCGGATCCCCGCG

protein sequence of jgi.p|Trimin1|347565

>Trimin1|347565|estExt_Genemark1.C_Ctg_130059 ID=Trimin1|347565|estExt_Genemark1.C_Ctg_130059|Name=jgi.p|Trimin1|347565|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=651bp
MEFTKRDLALLLPDQVGDAASLRFTADASADAAPAEMLKPRIDPTKKVVI
YRAGQVPNFGANHQDEEGGTRRRRKGWDKGATQAAVAPSAGEGAGVGALL
EGFGPLSVEEQDDEERRRAAARSKARARARLVVEAEVIEGSASESDGELE
GAYQKGAGKRRDADETPVEGDVAVGQADEQEEEEEDVAARRARIRARLRA
AASAGPDKAAEEAKARQRAEAAVLEEPGGAEEEEGEEEGEEGSDEWETDS
ESESEADEEGSDEWETDSESEAEADEVALLKPVFVPREKRETLLQAKALE
DAARARAHKDAQELERKKRETRQLVAEEIRRDQEKSVAVLDGGGSDGELP
DDTDDPDSILQLEAWKELEAWKELEAGARDAAPHELEAWKVREMQRLTRD
KEEREALARERAETERRRNLTEDERRREDRELGKGAGKEKSKWKFMQKYY
HQCWCAASGAARSWRMRAADIACGDGVVVNAPAAAACAACRLLRRAATQR
AGVFYMDEDSVKDRGDVRLRDNTGATGEDKFNMEAMPKVMQVPDLLLNFL
RGHVTGEDKFNMEAMPKVLQVHNFGRSGQTKWTHLAAEDTTNLAEPFLMS
DRTIRSKLESKMAGTGDVDAPFRRRRGGGGGGDQHDYQQMPLPPPHYHVG
*

mRNA from alignment at Contig_13:645040..655696-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5807 ID=mRNA_5807|Name=jgi.p|Trimin1|347565|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10657bp|location=Sequence derived from alignment at Contig_13:645040..655696- (Tribonema minus UTEX_B_3156 )
GGAGTGTGGGCTGTCGTTGTCAAGAAGGCGCCTCTTGTGGCGACTCCAGA
GCCCATTTGGCTCAGGCGGAGTGAATTTGTGCAAAGCAGGAATCAGGCGA
AGCAGAGGAGCTCAGCCCTAAGCTTGGCTACACAGCATCATGGAGTTCAC
AAAGAGGGATTTGGCGCTGCTGCTGCCGGATCAGGTTGGGGATGCCGCCA
GTCTTCGGTTCACGGCGGATGCATCCGCGGACGCAGCTCCGGCTGAGATG
CTGAAGCCCAGGATCGATCCCACAAAGAAAGTGGTCATTTACAGGGCGGG
TCAGGTCAGTACATGGTATGATCCTATTATTGAACACTGGCGGCCAGCGA
CAAGCGTATGAGTGCAGGTGACCATTAACATGCAAGTGTCTACTACCAGA
CTCTGAAGCGTCCTGTAAATATTGTTCCGACCAGCTTCGTGTCGCTTATG
AATGATGACAGGTCTCACAGTTGTAAAAGGTCTGTCAAGATCCCGACAAG
TCGACACTATCGATCACTTCTCTGTTGAATGTGCTGCAAGGCGGTTGGTC
AAACTTCACCTTCATGATAAACATTTTACTTCCTTGAAGAATAGTTTGCT
TCCCCTTCACTGCCAATTGCTGCAGCCAGTCTGGTGGTTGCCTGGCGTGT
CCCTGGCGGATGCAATGAACAATTACCCACCACTATGATGGCTGCTGTTG
CGTCATAATCTTGTTTATATGGATGGCAAAGTCTTCCGTCACACGCCATG
CCACTATGCCAGGAAAGGCATTTTGTATTTAGGAGCGTTGGCCACATCAA
ACTCTTACACACGTCAAAACCTCAGGTGCATTCCAACGATGCTGCTGCCA
AGCAGGAGGCAGGACAAGGTTCATTAGGAATCAGGGCTTCACCTCCCCAA
GTCCGCACTTTGCACAAAAGTGCATGCTACACTGCAGAACCCCCCTTTAT
CCCAGCGCCCCAATGGCGGCCGCCTTTGCACTCAGCGAAGGCGGCGATTC
TGCGCATCAACTGGTTTCCCCACACTACTGGCTTGAGCCGGCATGCAGCG
GCAGAACGGGTGAGACGGTCGATGCTGAAGCTCGTGAACCACACGCAACT
GACCGGGCTTCACTACGCAACCCACACTCTGCCCGCTGACAGGTGCCAAA
CTTTGGTGCGAACCACCAAGACGAGGAGGGCGGCACGCGGCGTCGGAGAA
AGGGCTGGGACAAGGGGGCGACCCAGGCAGCGGTGGCGCCCTCTGCAGGG
GAGGGGGCGGGGGTGGGGGCTCTGCTGGAGGGGTTTGGACCGCTGAGCGT
TGAGGAGCAGGACGATGAGGAGCGGAGGCGTGCTGCGGCCAGGTCGAAGG
CGCGGGCGCGCGCGCGGCTCGTCGTCGAAGCTGAAGTTATAGAAGGTACG
CCTCCTTGTGTAAGAATTGGCAGTTACTTGAGGTGCGCAGCAGAGGGTCA
AGTCGCGGGCGCGCACGCAGCACGTCATTCCAGTCAAGCTGAAGTCATCG
AGGCGCGCCCTGTGGCCGACTGCGCAGTGATATGAGCCGTGCAACGACTG
CTACATGGTGCTTGGAGTACGGCACTTCCCGTGGTAACTTCAAGTCAGAG
GGAGTCTGGTGAACAGGGCGGCGGCCACTGGCGTGGGGCGCATATTGCGC
TGTTGAGTGTTGAGGGTATTGATGCAATTTGAAGGTGGTTCTACTTTCAT
GTCGCTCTCAGAAAGTGCAAGTTCACATTTTTCCGAGGTCAGGATGTTGC
ATCACGGGCGAATACAGTCTGCCGAGACGTGCACATTCTGCGATACAACA
CGAAACTTGACATCCACAAATCTTTGTAAACAGCCCTGTCAGTTGAGTTT
TGGGCTGCGTTGAGTGCAGCTGGTAGCCCGCCGCACCCCCCCCTTCCCCC
CACACACATGTCCGCGTCCCTGGCCACAACGCTGGGAACAGCCGATTGCA
CCCGCACTGCATAACGACTGAGTATCTGCTGCCAAAATGGGTGTTTCAAA
TGAGATCTGTGGGGAGTGGCGTGTGTTGTTGCGTTTCGGCAACCCAAAAA
AATGACTAAGCAGGCCACATCATCAGAAATGCCGAGCTCACTTCAAAAGA
TATCGCTCCTGCGAAGTGGCGGCTACACAGCTGCTGGTGCCGGGATGAAG
GAGTGCATTAGTTGAAGTCGAAGTGTGTGGTTTTGGGTCTGTTGGGATTG
GCAAATCTATGTCTGCGAACAGAGGACGCAGGAGCGCAGTCGCGCAGTAC
TGGGTCTTGCGTGATCTGAGGTCCGGAGGTCCGCAGGTGCAGTCACTCCA
ACTGTTGAATGTGCGTAACGGCTGTAACTGCCTTTCGTGCGGGGGCACAC
GCTTCCCCCCACACGACACTCAGCTGGCGCTGATGCTGGTCGTAGCTGAT
GGTGGCGCAGTGCACTCTTGTTCATACATATACTACCAGGAACAGGCTGC
GACTGGTTGACACATCACTCAGCGCAATCGTCATCATGGACATGAAACGC
TTTGGGTTGACGCAGGGAGCGCGAGCGAGAGCGATGGGGAGCTTGAGGGG
GCCTATCAAAAGGGCGCCGGCAAGCGCAGGGACGCGGATGAGACGCCTGT
GGAGGGGGACGTTGCAGTTGGCCAGGCAGACGAGCAGGAGGAAGAGGCGA
GACGCGCAATTCTGCATACTACTCCAAGCACTAGATATTGTGGTGTTTGC
GCCAACTGGAAGGGCCAGATATTGTCGTCAAGTTTTCAAGTTCCTCGCAA
TGCACTGTCGGCAGGCAAGATTGTGAACAAAACAAAACGGCTGCGGCCGG
GGGTGCACCTGCAGGAGGTGAGACCTTTGAGGATGCGATGATTGCACAGC
AATGTGCACCTGGGTATGCTTACTTCGCAGCATGCCTTTCCTCTGCTGCG
CTGCTGCTGTTCTCGGCTGGTGATTCACCAACTCGTCACTTCGTTGTGAC
TTCAGTCATTCAGTCGTGCTTGCATGAGTTCCCCCATTGCCCGATGGGCA
GACTGTTTGAAGCCGCCTATGTATAGTGCTGCTGTTTTCACTAGACACTC
ACTGCTCAGCTTGCCCCCGTGACATGTGCAGCGCATGCTCCATCATAAGT
GCTCATCCATCCATATGTAACAGACTACAAGTCATCTTGCAGCAAAAGGG
TCGCCATGCGGCAGCGCACTGGAGCTTGCGTCAGTCACTCCGTCTTGCAG
CTCGCGTACTGATTTATGGCACGCATGCATTCATGCCTGCAATCACGAGC
GTTTGCCACGTTAGGCTTCTAAGCAGCGGGAGCAGCTGCCAACCTTTGCG
CTCGCACATGCCCGGAGGCGCCATGACATTGACCTGCCTCGCTCTGTTTA
GGGTCAGGGTTAGGGTTAGCTGCGCTGCGTGCCGAGCGCTGCCCACTGCT
GTTGTTGATCGCTGCCACTACTACCGCCTCACTTGCTGAGCGCTGCCTGC
TGCCGATGCTGATCACTGCCACTGCGTCTCTTGCACCGTTAGGGCTAGGG
CTGGGGAAATAGGGTCAGGGGTAGGGTTAGGGTTGGCGTCACATCTCTTG
CTGAGCGCTGCCCGCTGCTGTTGCTGTGCGCTGCCACCCCGCCATCGCCT
CTCTCTCGGGGGGGGGGGGGCGCAGGAGGACAGCGTCGCCACGCGCCGCT
GCCCTCAGAGAGGCGATGGTCGCCCCTCTCACGCAGCGCTGCCAGCCGCT
CGCCGCTGAACGCTGCCACTCCACCTCACCTGCTACTGCCGTTGCTGATC
GCTGTCACCCCTCTCGCCCCGCTCGCCCGCGCACGCAGGAGGAGGACGTG
GCAGCGCGACGCGCCAGGATCCGCGCGCGCTTGCGCGCCGCCGCGTCCGC
TGGCCCCGATAAGGCCGCCGAGGAAGCCAAGGCGCGCCAAAGGGCGGAGG
CGGCCGTGCTGGAGGAGCCAGGGGGGGCAGAGGAGGAGGAGGGGGAGGAG
GAAGGGGAGGTGAGGGAACTGGTCTGCCAGCAGGCTCTAGGGTGTGGCAT
CAAGTCACTGTTCTTGGCATCATCATATCTTCTTCATTGGTGTTGAAGGT
TGGCTGTTGGGTGATTCTAATGGTACACGTCGTTTTCGGGCAGGTAGTGT
GCGGAGTGTGCAAACACCCTGTGGTGGCAAAGACATGAGTGCTCTGTGAA
ACGTGTGCGTGCCCGCGGCGTTCTGCCTGCTGCACTTGGCGGGAGGACGG
CAATGAGCAGGAGTCAGACTCTCAGTCTGAGTTTGGCGTGGCGGCTGCTC
ATGGCACTGTGCGCGATTCACGCGCGCCATACGGCTTAAACCACGCAGGG
TCCCCCCCCCCCCTCCCCCTTATCACCAGTTCTCAAGTATCATCAGTTCG
GCGTCCTCTGACGCGCCGCTACCCCCGCCTGGCGGCGACGCCTGTCCCGC
TGCCTGGCAGGAGCCCCCCCCCTCTTCATCAGCAGTACTCGTGTACCATC
AGTAGGACGTCTTCTGACGCGTCAGCATTCCCGCCTCTCCCTGCTGTGCC
GCGCAGGAGGGCAGCGACGAGTGGGAGACAGACTCTGAGTCTGAGTCTGA
GGCGGACGAGGTGGCGCTGCTCAGCAATACTGCAAGCGCCATATGGGCCC
GTATCTTACACACACACACAAACACACACACACACACACACACACACATG
CCCCCTTATGAATAATACTCGTGTATCATCAGTACGGCGTCCTCTAACAT
GTATTATCGCTCGGCGCCCCGCAGGAGGGCAGCGACGAGTGGGAGACAGA
CTCTGAGTCTGAGGCGGAGGCGGACGAGGTGGCGCTGCTGAAGCCCGTCT
TTGTCCCACGCGAGAAGCGCGAGACGCTGCTGCAGGCCAAGGCGCTGGAG
GACGCGGCGCGCGCGCGCGCGCACAAGGACGCGCAGGAGCTGGAGCGCAA
GAAGCGCGAAACGAGGTGCGCGCGAAAGTGATAATCACGAAGCATTCTTC
ATGTTTTTAATCTAGAAAATGTGGCGGAATTGGCAGACGCGCTAGATTTG
GTTCTAAGTAGTGACAATATTTCGTGAGAGAATATGGCGCACAAGGACGC
GCAGGAGCTGGACCGCAAGAAGCGCGAGACGAGGTGCACGCGAAACTCAT
CTATATGAGGTGCACGCGAAACTCATCTATATGCTAAGCATTCTTCATGT
TGTAATCCAAGTACGAAAAAGATGATGACTATTGCGGATGTGGCGGAATC
GGCAGGCGCCCTAAATCAGGGTCTAGTGATAGTATCTCGTGAGATAACAT
GTCGAACAAGGACGCGCAGGAGCTGGAGCGCAAGAAGCGCGAAACGCGGT
GCGCGCAAAGCATGCGTGGGGAGCTGAAAATTCGAAGTAGGGATATGTTG
AAGTGACGTGTGTAGGTGAACGGTGGTGATGCTTCAAAGGAGGACATCGA
GGCGTGGACGCTTGACATTTGTGCACTGTGATGCAGCGGTCGACCTGAGT
TTTGATATCCTCAGGCGCTACATGCCTCTCCCATACATGGGTGACGACGC
ACGGTCAGCTCGCGCTGTAGCACGATGACAGCGTCAATCATGTACTTCCC
AATTGCTGACTGCAGGAGAGATGAGGCGCCATTAAGCCCTAAGCTCAGTC
TAGGTCCATCGAACTCAGAGAGATGTATTGACACTGGTATATACCCACTT
GTACTCGCGTGCATGGCCCATTTCAGCGAAGCAGTGCATGTCAGACAAAG
TAAATGACGCCAACATTTGACCAGGTGCGCTTGTTGCATGTCGCAGCTCT
CCACGCGCTCTGTGAGCAGGATGACTTCGACTCTTGACTCATCAAATAGG
ACTATTGACCCATTGACGTTTGGCTCTTTGAGTATGACTCTTGACTCATT
GGTTATGACTCTTGACTTATCAATTTGGTGCGCCTCATGGAACGCGTCGC
GCCGCAACAACAGGCAACTCGTCGCGGAAGAATAAGGCGCTATCAGGAGA
AGTCCGCGGCAGTGCTCGATTGGCGGCGGCAGCGACGATGACTCTTGACT
CATTTACTATGACTCATCGACTATGGCTCTTGAGTCGTTGACTATGACAA
CAGGCAGCTCGTCGCAGGAGAACTCCGTGACAGTCGATGGCGGCGGCAGC
GACGGTGACTCTTGACTCATTTACTATGATTTTTGACTCGTTGACCATGA
CAACAGGCAACTCGTCGCCGAGGAGATCAGGCGCGATCAGGAGAAGTCAG
TGGCAGTGCTCGACGGCGGCGGCAGCGATGGCGAGCTGCCAGACGACACC
GACGATCCCGACAGCATACTGGTACGTACTACCGCAGCTCTGCATACTGG
TATGTACCTACTGCAGCTCTGCCAGTACTGCTGCGTGCTGTGATATGCAT
GCATGTGCGCCCTTGGAGCGCTTGACGCCACTCGCAGATCGGTGGCGGTC
GTCAATTGCGGCGACAGCCATGCGAGGGCTGTGCTTGTGCGCAGTGGCGC
TACGGCAGTTGCGCTTGTTTGTACGCGCGATGGGGCATGCGGGCGCTCTG
TTTCGAGTGCGGTTTGCAAAGGTGAAGTACCCGCATACAGGCATATCTGA
TGACATTGATCACAAAGCGGGCACGCGCGTGCATGAACCATGGCGTTTCC
TGCAGAGCATTGTCACAGTGGCGCCGTGCGCACACTTGAAGTTGAAGTGG
GACCACCTATTTCGGGCTGCGAGCACTTCAGGTGTGATTGCTCATCGCTT
CACCATCGCGCTGCGTCACGCGCTCGGCTCGCCCGCTTCATTGCAGCAGC
TGGAGGCCTGGAAGGTGCGCGAGACGCAGCGCCTGACGCGCGACGAGGAG
GAGCACGCATCATACAAATCCTCACCAATCGCGAAAGCGATTTGCTGCAA
CTGACCAATCGCATCGCGCTGCATGCCAACATTCGCCATCACCTCGCCCC
CCGCGTGCAGGAGCTGGAGGCCTGGAAGGTTCGCGAGATGCAGCGCCTCA
CGCGCGAAGAGAAAGATCACACATTATACAAACCTCAGTACAATCGTGAA
AGCGATCGCTCATTGCTGACCGCTGCGCGCCGTGCACTCTTGGCGACTGC
TTCGATGCAGGAGCTGGAGGCAGGTGCGCGGGATGCAGCGCCTCACGTGC
GACGAACCATACATACCCCAATCAATCCAATCGTGGACGCAATTTCTACC
ACTGACCTATCGCATCACATCGCTTCGCGCTGCGTGTGCAACATTCGCTT
CCTTGCAGGAGCTGGAGGCCTGGAAGGTGCGCGAGATGCAGCGCCTCACG
CGCGACAAGGAGGAGCGCGAGGCCCTCGCGCGCGAGCGCGCGGAGACGGA
GCGGCGCCGCAATCTGACGGAGGACGAGCGCCGCCGCGAGGACAGGGAGC
TCGGCAAGGGCGCCGGCAAGGAGAAGAGCAAGTGGAAGTTCATGCAGAAG
TACTACCACCAGGTCAGTGCGCGCGCGCGCGGGCGCGCGCTCGCGAGGCA
CTGCGGAATTGTGCACGGCAGCTGGTTGCGGTCGGTCGCGCGAGTGCTGG
TGCGCAGCGAGCGGCGCGGCGCGTTCTTGGCGCATGCGTGCCGCGGACAT
TGCGTGTGGGGATGGCGTCGTTGTCAATGCGCCGGCGGCAGCGTGAGCGC
GGTGCGCAGTGTCAGGGTGGGCGACCACGTATATAACAGTCGGGGATTAG
TTGGTGCGTTGTACGTCCATGCAGGCATAGCGCGTGCTGACTGCTGCGCC
GTGTCGCCGGCTGATGCCGCAGGGCGTGCGCCGCGTGCCGGCTGCTGAGG
CGCGCCGCAACGCAGCGTGCGGTGCGGGGCGCAGGCATCGTTCGCGCGCC
TGTCACGCGCGATCGACGTGCTGAAGGCCAAGCTGCGTCGCCCATTAACT
CATGCTGCGCGTACGCTGACAGCCTGCTGTCCGTTGAGCTATGCCACCGT
TGCTTGAGCGGCGTGTCGTTCTGTGGTGCTCTGTGAAAACGCGGAGTCGA
CACCTTGAAATTGAAGTGGACTGCGGTGCCAGTCATGATAACGCTCAGGC
GTGTGTGAATTTGGGTGTGGCCCCGTCACACAGCGCGCACGGACGCAGCT
GCTGTTTCATCTCACCGCGCATTTATCGACAGCGTTGTCGTGTAGACTTC
GATGATGTGCTGACCAGACGCGCGCGGCTGTGTACTGTGCCGCTGTGCCG
CAGGGCGTGTTCTACATGGACGAGGACTCCGTCAAAGACCGGGGCGACGT
GCGCCTGCGCGACAACACGGGCGCCACGGGTGAGGACAAGTTCAACATGG
AGGCCATGCCCAAAGTCATGCAGGTGCGGCCCCAATCTGCTCTTGACCTT
TCTGCCTGAAGCATGTAACGGTAGAGGACAGTTTCAACATGAAGGCCATG
CCCAAAGTCATGCAGGTGCGCACGCGCGGCCCCCCCAGCTACTTTGGCGT
TAGACTTTTCCCTTGAAGTGTGTGACATCAGACCGTACAAGTTCAACATG
GAGGCCATGCCGAAAGTCATGCAGGTGCCCGATCTACTGTTGAACTTCCT
AAGGGGGCATGTAACGGGCGAGGACAAGTTCAACATGGAGGCCATGCCCA
AAGTGCTGCAGGTGCGGCCCCAATCTACTGTTGAACTTTCTGCCTGAGGC
GTGTAACGGTAGAGGACAGCTCAATATGGACGCCATGCCGAAAGTCATGC
AGGAGCGCACACGGGGCCATGCGCCAGTATATCAGCTACCACTTTGACAT
ATGCTTACAGTTGACCATTGCAGGGTTCAAGTAATTAAGTGCAGCTGCGG
CACAATGTTGGCGCGATCTGGGCAGACAGGTTCAACCTCGATGCTGTGCT
CATGAGCGTACAGTCGAGCAGTGAGGGAAAGCCGGCAGTGCCATCCCTAT
TTAAATGCTATCCCTGATACACCAGTGCAGTCCCACTGGCGGACAGGAAG
CCTTGGTGCGGCATCACATTCAGGCTTAAGTACAGTCAGTGTAACAGGCA
CTGGTCGACACCTGCACCGAGTTCTTCGGCTCAGTAGGCATCAGATTGCT
TAAGTCGAGCACTCCAAGCGCATCACGTTTGCACCTGCAGTTACTGTGCG
ACGACTGCGCTGTGTTGAAATCCACAGCCTCAACGTGCAGATGGCATCAC
CTCCACCCGGTTGGTGATGGCAATGCACTCAAGGTGGTGGCTGTCCATGC
TCACACTGCAGAGGGCGCCGCATCCCAACAACCTGCTGCGCTGCGCCGAC
CAGCGACCTTTGCGCAACGTACATCGATTCATCGATTCACTCGCCTGCAG
TTCACTCGCGGTCGGTGCTGACTCTCACCCCGAGCCCGGGGCTCACGCCC
AGGAGGCATTTCCCGCCATCGTGAACCCCGCACGCACCCGCGTGCACCGT
CGCAGGTGCACAACTGCGGCCGCAGAGGCTCAACTCGTAACACTTTGCAA
TTCATGCATGCCCCGTCCCAGCCCGGTTCCGTGACTTGCGTTGGTGACGC
CTTCGCTGACCCGCTGACCCCTCGTGCCGAGCGCCGTCGCTCACAGGTCA
CCTGCGCCGCACTGACCTTCACTCCAAACTTGAGCTCCCCTCACACACAC
ACACACACACACACACACACACACACACCCCGCACACAGAATCTCATTTC
CTGCGTAGCGCCCTCGTTAACCCCGCACGCCCCCGCGCGCGCTGTGCACC
ATCGCAGGTCCACAACTTTGGCCGCAGCGGGCAGACCAAGTGGACGCACC
TCGCGGCGGAGGACACCACCAATCTGGCGGAGCCATTCGTGAGTGCGCGC
TTTGCCTGCTGATCTGGCACTCTCGCTGCGTCGTAGGGGAAACCCACACG
TGCTGTACTATGTGCACACTGGCAGTGCGCATTGCATGAAGCATAGGTGC
ACAGTCCCCTGCACCGTTTCAACTCAAAAAGCAAGCGTTGGTTCACACCT
GCACCCAGCTTGGCTCTGACGCAGCTCGCGGGCAGACTCCAAAAGCATGT
GTTCGTACCTTGTAGCTGCTCACCAGAGGTGTGGGCGGCCAGGGCAACCA
TAATCAGGTGGCGTCACAACATTTTGTCACTCGAGGGGGGACTTCAGACA
TGCATGACCCCGCCGCGCCACAAGGATGACATCACATGTCAAGGGCACTA
CTCCACAGCCGTCGGGGATGCTGCGTGCCTGCACGCAGTTCATGCGGGCC
TCTGCATGATAGCATTTACATCCTGTCCTCTCTGACTTTTGGCCTTCTTG
TTACCCTCAGTGGTACTGCAAGATCTGGCTCCTGAGGCGCGCTGCGACAT
GGGGGGCATCTACACTACTGCAATGCGGAGCCCCCCTGCTGCTGTTCCGA
GTGTCAATGCTGCCATGATCGACTGTCGTCACATCAATCCCTATCCTGCT
TGCAGCGCACCAGACCGACCGCCCCCGTACTGACCATCTCCTTCCTTCGA
CGTTGCAGCTCATGTCCGACCGCACGATACGCTCCAAGCTGGAGAGCAAA
ATGGCGGGCACCGGCGACGTGGACGCCCCCTTCCGACGGCGGCGCGGCGG
CGGCGGCGGCGGCGACCAACACGACTACCAGCAGATGCCGCTGCCGCCGC
CGCACTATCACGTGGGCTGATGTTGTGCCGCACTCGAGCGGCATCACACG
TATTGCTAGGTAGATCACAGAGCACTGCATAATACATGTGCCGCGCGGAT
CCCCGCG

Coding sequence (CDS) from alignment at Contig_13:645040..655696-

>mRNA_5807 ID=mRNA_5807|Name=jgi.p|Trimin1|347565|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1953bp|location=Sequence derived from alignment at Contig_13:645040..655696- (Tribonema minus UTEX_B_3156 )
ATGGAGTTCACAAAGAGGGATTTGGCGCTGCTGCTGCCGGATCAGGTTGG
GGATGCCGCCAGTCTTCGGTTCACGGCGGATGCATCCGCGGACGCAGCTC
CGGCTGAGATGCTGAAGCCCAGGATCGATCCCACAAAGAAAGTGGTCATT
TACAGGGCGGGTCAGGTGCCAAACTTTGGTGCGAACCACCAAGACGAGGA
GGGCGGCACGCGGCGTCGGAGAAAGGGCTGGGACAAGGGGGCGACCCAGG
CAGCGGTGGCGCCCTCTGCAGGGGAGGGGGCGGGGGTGGGGGCTCTGCTG
GAGGGGTTTGGACCGCTGAGCGTTGAGGAGCAGGACGATGAGGAGCGGAG
GCGTGCTGCGGCCAGGTCGAAGGCGCGGGCGCGCGCGCGGCTCGTCGTCG
AAGCTGAAGTTATAGAAGGGAGCGCGAGCGAGAGCGATGGGGAGCTTGAG
GGGGCCTATCAAAAGGGCGCCGGCAAGCGCAGGGACGCGGATGAGACGCC
TGTGGAGGGGGACGTTGCAGTTGGCCAGGCAGACGAGCAGGAGGAAGAGG
AGGAGGACGTGGCAGCGCGACGCGCCAGGATCCGCGCGCGCTTGCGCGCC
GCCGCGTCCGCTGGCCCCGATAAGGCCGCCGAGGAAGCCAAGGCGCGCCA
AAGGGCGGAGGCGGCCGTGCTGGAGGAGCCAGGGGGGGCAGAGGAGGAGG
AGGGGGAGGAGGAAGGGGAGGAGGGCAGCGACGAGTGGGAGACAGACTCT
GAGTCTGAGTCTGAGGCGGACGAGGAGGGCAGCGACGAGTGGGAGACAGA
CTCTGAGTCTGAGGCGGAGGCGGACGAGGTGGCGCTGCTGAAGCCCGTCT
TTGTCCCACGCGAGAAGCGCGAGACGCTGCTGCAGGCCAAGGCGCTGGAG
GACGCGGCGCGCGCGCGCGCGCACAAGGACGCGCAGGAGCTGGAGCGCAA
GAAGCGCGAAACGAGGCAACTCGTCGCCGAGGAGATCAGGCGCGATCAGG
AGAAGTCAGTGGCAGTGCTCGACGGCGGCGGCAGCGATGGCGAGCTGCCA
GACGACACCGACGATCCCGACAGCATACTGCAGCTGGAGGCCTGGAAGGA
GCTGGAGGCCTGGAAGGAGCTGGAGGCAGGTGCGCGGGATGCAGCGCCTC
ACGAGCTGGAGGCCTGGAAGGTGCGCGAGATGCAGCGCCTCACGCGCGAC
AAGGAGGAGCGCGAGGCCCTCGCGCGCGAGCGCGCGGAGACGGAGCGGCG
CCGCAATCTGACGGAGGACGAGCGCCGCCGCGAGGACAGGGAGCTCGGCA
AGGGCGCCGGCAAGGAGAAGAGCAAGTGGAAGTTCATGCAGAAGTACTAC
CACCAGTGCTGGTGCGCAGCGAGCGGCGCGGCGCGTTCTTGGCGCATGCG
TGCCGCGGACATTGCGTGTGGGGATGGCGTCGTTGTCAATGCGCCGGCGG
CAGCGGCGTGCGCCGCGTGCCGGCTGCTGAGGCGCGCCGCAACGCAGCGT
GCGGGCGTGTTCTACATGGACGAGGACTCCGTCAAAGACCGGGGCGACGT
GCGCCTGCGCGACAACACGGGCGCCACGGGTGAGGACAAGTTCAACATGG
AGGCCATGCCCAAAGTCATGCAGGTGCCCGATCTACTGTTGAACTTCCTA
AGGGGGCATGTAACGGGCGAGGACAAGTTCAACATGGAGGCCATGCCCAA
AGTGCTGCAGGTCCACAACTTTGGCCGCAGCGGGCAGACCAAGTGGACGC
ACCTCGCGGCGGAGGACACCACCAATCTGGCGGAGCCATTCCTCATGTCC
GACCGCACGATACGCTCCAAGCTGGAGAGCAAAATGGCGGGCACCGGCGA
CGTGGACGCCCCCTTCCGACGGCGGCGCGGCGGCGGCGGCGGCGGCGACC
AACACGACTACCAGCAGATGCCGCTGCCGCCGCCGCACTATCACGTGGGC
TGA