mRNA_5528 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|161986
Unique Name	mRNA_5528
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: A0A835Z438_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z438_9STRA)

HSP 1 Score: 715 bits (1846), Expect = 4.240e-260
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 1

Query:    1 METNAQGRALLSWRSVEAAFASVCKAHVPRPGQPMARTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRERYDDTTHGTLTSVKTTIMQEWDGLRTTGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLTSQLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSETPRHNLAMYL 1107
            METNAQGRALLSWRSVEAAFASVCKAHVPRPGQPMARTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRERYDDTTHGTLTSVKTTIMQEWDGLRTTGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLTSQLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSETPRHNLAMYL
Sbjct:    1 METNAQGRALLSWRSVEAAFASVCKAHVPRPGQPMARTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRERYDDTTHGTLTSVKTTIMQEWDGLRTTGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLTSQLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSETPRHNLAMYL 369

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: D8LRV8_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRV8_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 3.100e-202
Identity = 293/358 (81.84%), Postives = 322/358 (89.94%), Query Frame = 1

Query:   46 VEAAFASVCKAHVPRPGQPMARTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPG-TGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRERYDDTTHGTLTSVKTTIMQEWDGLRTTGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELE---TGAALSDMDLTSQLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSETPRHNLAMYL 1107
            +E AFA+VCKA+VPRPGQPM+RTREEV ALAQ DRHE AL+ NVILPKDIGVTY MIGGL  AKELLRQ ITYPL+FPHLYSEGIA+EAVKGVLLFGPPG  G+TMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVI++DEVDSVLSSRE+YDDTTHGTLTSVKTT+MQEWDGLRT GDRVVVIASTNRPFDLDEAVLRRLPRRI+VDLPD ETREEIL+V+MA NRVD +V+F AI E LEGFTGSDIKEVCREAVVRIAHEKAQEL+         ++DLT+QLR VT +DF EARK+LT SVSEKGREL+RVWEWN+EYGE+KKK  +   H+L+MYL
Sbjct:    1 METAFAAVCKAYVPRPGQPMSRTREEVTALAQHDRHEQALVTNVILPKDIGVTYDMIGGLGGAKELLRQCITYPLRFPHLYSEGIAKEAVKGVLLFGPPGGRGRTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIFIDEVDSVLSSREKYDDTTHGTLTSVKTTLMQEWDGLRTGGDRVVVIASTNRPFDLDEAVLRRLPRRILVDLPDAETREEILKVSMAQNRVDASVNFTAITEELEGFTGSDIKEVCREAVVRIAHEKAQELDRAGVNGVREEVDLTAQLRPVTMDDFWEARKKLTASVSEKGRELSRVWEWNEEYGEVKKKRPDASAHHLSMYL 358

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: A0A6H5KCX2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX2_9PHAE)

HSP 1 Score: 524 bits (1349), Expect = 1.110e-171
Identity = 269/327 (82.26%), Postives = 293/327 (89.60%), Query Frame = 1

Query:  136 AQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRERYDDTTHGTLTSVKTTIMQEWDGLRTTGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELE---TGAALSDMDLTSQLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSETPRHNLAMYL 1107
            A A  HE AL+ NVILPKDIGVTY MIGGL  AKELLRQ ITYPL+FPHLYSEGIA+EAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVI++DEVDSVLSSRE+YDDTTHGTLTSVKTT+MQEWDGLRT GDRVVVIASTNRPFDLDEAVLRRLPRRI+VDLPD ETREEIL+V+MA NRVD +V+F AI E LEGFTGSDIKEVCREAVVRIAHEKAQEL+         ++DLT+QLR VT +DF EARK+LT SVSEKGREL+RVWEWN+EYGE+KKK  +   H+L+MYL
Sbjct: 1069 AGAGEHEQALVTNVILPKDIGVTYDMIGGLGGAKELLRQCITYPLRFPHLYSEGIAKEAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIFIDEVDSVLSSREKYDDTTHGTLTSVKTTLMQEWDGLRTGGDRVVVIASTNRPFDLDEAVLRRLPRRILVDLPDAETREEILKVSMAQNRVDASVNFTAITEELEGFTGSDIKEVCREAVVRIAHEKAQELDRAGVNGVREEIDLTAQLRPVTMDDFWEARKKLTASVSEKGRELSRVWEWNEEYGEVKKKRPDASAHHLSMYL 1395

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: A0A7S2FC78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FC78_9STRA)

HSP 1 Score: 478 bits (1231), Expect = 1.100e-159
Identity = 254/362 (70.17%), Postives = 296/362 (81.77%), Query Frame = 1

Query:   55 AFASVCKAHVPR----PGQPMARTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRERYDDTTHGTLTSVKTTIMQEWDGLRTTGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLT------SQLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSE-TPRHNLAMYL 1107
            A A+VC+   P      G P++R R EV +LA  D+HE AL++NVI P DIGVTYSMIGGL+  KEL+RQ +TYPLK+PHLY EGIA EAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNA+AVFTLARRLAPCVI+LDEVDSVLSSRE  DD++HGT+TSVKTTIMQEWDGL+TT DRVVVI STNRPFDLDEAVLRR+PRRI+VDLPD+ETREEILRV+MA NR+  ++DF  +A  LEG+TGSDIKEVCREAVV IAHE A+ LE  +A    D        + LR VT EDF  A ++L+ SVSE+GRE++RVWEWND+YGE+K+K  + TP    ++YL
Sbjct:  504 ALATVCQLATPSLSALSGGPVSRDRSEVTSLA-TDKHERALISNVIAPHDIGVTYSMIGGLESVKELMRQCVTYPLKYPHLYQEGIAAEAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNAKAVFTLARRLAPCVIFLDEVDSVLSSREHGDDSSHGTITSVKTTIMQEWDGLKTTKDRVVVIGSTNRPFDLDEAVLRRMPRRILVDLPDVETREEILRVSMAKNRMADDIDFSEVARQLEGYTGSDIKEVCREAVVCIAHEAAKSLEERSADKREDYADVEEEEAMLRPVTREDFTRALQKLSASVSERGREVSRVWEWNDQYGEVKRKQKQVTP----SLYL 860

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: A0A7S2Y6R9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6R9_9STRA)

HSP 1 Score: 461 bits (1185), Expect = 1.560e-155
Identity = 253/374 (67.65%), Postives = 297/374 (79.41%), Query Frame = 1

Query:   43 SVEAAFASVCKAHVPRP--GQP------MARTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRE-RYDDTTHGTLTSVKTTIMQEWDGLR--TTG-----DRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLTS---QLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSETPRHNLAMYL 1107
            ++E A + VC+   P P  GQ       + RT+EE AALAQ D+HE AL++ V+  +DIGVTY MIGGL E KELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +ENKWLGESEKNA+AVFTLARRL+PCV+++DEVDS+LSSRE   DD+ HGTLTSVKTT+M EWDGL   T G     DRV+V+ STNRPFDLDEAVLRR PRR++VDLPD+ETR EIL+VT+A NR+DP V+   IAE LEG+TGSDIKEVCREAVV I+HE A+ L+ G A    D ++   +LR VT EDF+ A  +L  SVSE GRELARVWEWNDEYGEIK+   + P+  ++MYL
Sbjct:  272 TLERAISGVCRI-TPSPYGGQSGSSAAAVHRTKEETAALAQ-DKHEKALISQVVNAQDIGVTYDMIGGLTEVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLSPCVVFIDEVDSLLSSREGTSDDSAHGTLTSVKTTMMSEWDGLNSGTNGQGKGADRVIVVGSTNRPFDLDEAVLRRFPRRLLVDLPDLETRAEILQVTLAENRLDPQVNLTKIAERLEGYTGSDIKEVCREAVVYISHEHAKVLDQGLATQQDDGSAPPQELRPVTTEDFERALSKLKRSVSETGRELARVWEWNDEYGEIKRDKKQAPKM-MSMYL 642

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: W7TKE8_9STRA (Katanin p60 atpase-containing subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKE8_9STRA)

HSP 1 Score: 460 bits (1184), Expect = 3.750e-154
Identity = 238/360 (66.11%), Postives = 294/360 (81.67%), Query Frame = 1

Query:   28 LLSWRSVEAAFASVCKAHVPRPGQPMARTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRERYDDTTHGTLTSVKTTIMQEWDGLRTTGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLTSQLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSETPRHNLAMYL 1107
            LLS   +E A   VCK  VPRPG P++RT+EEV ALAQ +RHE AL+ NVI P DIGVTY  IGGL + KE LRQ +TYPL+FPHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIE+KWLGESEKNA+AVFTLARRLAPCV+YLDEVDS+LSSR++ +DT + T+TSVKTT MQEWDGLRTT DRV+V+ASTNRP+ LD+AVLRR+PRRI+VDLPD +TRE++L+  +A NR+ P V+  +IA+ LEG+TGSDI+EVCREAVVRIAHE++++L+    +    L  +LR V   DF  A ++L+ SV+ +GREL RV EWN+ +GE++KK    P H ++MY+
Sbjct:  381 LLSLEGLETALGMVCKTSVPRPGVPVSRTKEEVTALAQ-NRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDAQGVEVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKK--VQPPH-MSMYV 736

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: A0A1Z5JHE7_FISSO (AAA domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHE7_FISSO)

HSP 1 Score: 471 bits (1212), Expect = 1.870e-152
Identity = 248/342 (72.51%), Postives = 285/342 (83.33%), Query Frame = 1

Query:  109 RTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRE-RYDDTTHGTLTSVKTTIMQEWDGLRT----TGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLT----SQLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSETPRHNLAMYL 1107
            RTREE+ ALAQ D+HE AL++ V+ P+DIGVTY MIGGL E KELLRQSITYPLK+PHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +ENKWLGESEKNA+AVFTLARRLAPCVI++DEVDS+LSSRE   DD+ HGTLTSVKTT+M EWDGL +    +GDRVVVI STNRPFDLDEAVLRR PRRI+VDLPD++TR EIL VT+A NR+DP V+F  IAE LEG+TGSDIKEVCREAVV+I+HE+A++L+ G     MD +     +LR VT EDF++A  +L  SVSE GRELARVWEWN EYGE+KK       H  +MYL
Sbjct:  948 RTREEITALAQ-DKHERALISQVVSPQDIGVTYDMIGGLSEVKELLRQSITYPLKYPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGSGDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLKTRSEILEVTLAENRIDPAVNFTKIAERLEGYTGSDIKEVCREAVVQISHEQAKQLDEGLQGVRMDTSVGSLQRLRPVTMEDFEKALSKLKRSVSENGRELARVWEWNAEYGEVKKMDKNHLPHLASMYL 1288

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: A0A7R9UC12_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC12_9STRA)

HSP 1 Score: 460 bits (1183), Expect = 8.340e-152
Identity = 242/337 (71.81%), Postives = 283/337 (83.98%), Query Frame = 1

Query:  109 RTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRERYDDTTHGTLTSVKTTIMQEWDGLRTTGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLTSQ-------------LRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKKGSET 1080
            R+REE+A+LA  D+HE AL+ANVI P+DIGVTY MIGGL+  K++LRQ+ITYPLKFPHLY+EGIA EAVKG+LLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNA+AVFTLARRLAPCVI+LDEVDSVLSSRE  DD+THGTLTSVKTT+MQEWDGL+TT DRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPD +TR EIL+VT+A NR+ P+V+   IA  LEG+TGSDIKEVCREAV+RI+HE A +LE+   ++    +S              LR V ++DF+ A +RL+ SVSEK RE+ +V EWN++YGEIK K  E+
Sbjct:  578 RSREELASLAN-DKHERALIANVISPQDIGVTYDMIGGLQSVKDVLRQTITYPLKFPHLYTEGIAAEAVKGLLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNAKAVFTLARRLAPCVIFLDEVDSVLSSREHGDDSTHGTLTSVKTTLMQEWDGLQTTTDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDADTRHEILKVTLAHNRLAPDVNLTRIANDLEGYTGSDIKEVCREAVLRISHEAAAQLESNPVVNFDPASSSGEPAEGQGARRSLLRPVNSQDFKIAMERLSASVSEKSREMQKVLEWNEQYGEIKSKRKES 913

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: A0A7R9VXH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXH1_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 2.450e-151
Identity = 241/352 (68.47%), Postives = 278/352 (78.98%), Query Frame = 1

Query:  109 RTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRE-RYDDTTHGTLTSVKTTIMQEWDGLR--TTG------DRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLTS-----------------------QLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGEIKKK 1068
            RTREE+  LAQ ++HE AL++ V+ P+DIGV+Y MIGGL + KELLRQSITYPLKFPHLYSEGIA EAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDAS +ENKWLGESEKNA+AVFTLARRLAPCVI++DEVDS+LSSRE   DD+ HGTLTSVKTT+M EWDGL   T G      DRV+VI STNRPFDLDEAVLRR PRRI+VDLPD+ETR EIL VT+A NR+DP+V+   IAE LEG+TGSD+KEVCREAVV+I+HE+A+ L+ G    D D+ +                       +LR V  +DF+ A  +L  SVSEKGRELARVWEWN+EYGEIKKK
Sbjct:  227 RTREEITGLAQ-NKHERALVSQVVSPQDIGVSYDMIGGLGDVKELLRQSITYPLKFPHLYSEGIANEAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFIDEVDSILSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGKGDAGSDRVIVIGSTNRPFDLDEAVLRRFPRRILVDLPDMETRREILEVTLAENRLDPSVNLTTIAERLEGYTGSDLKEVCREAVVQISHEQARLLDQGFLAEDDDMDAAAAEASSEDGQSDSGGSSIATLQRLRPVEMKDFENAMSKLKRSVSEKGRELARVWEWNEEYGEIKKK 577

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BLAST of jgi.p|Trimin1|161986 vs. uniprot
Match: B8BRR4_THAPS (AAA domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRR4_THAPS)

HSP 1 Score: 438 bits (1127), Expect = 4.810e-151
Identity = 235/334 (70.36%), Postives = 271/334 (81.14%), Query Frame = 1

Query:  109 RTREEVAALAQADRHESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIYLDEVDSVLSSRE-RYDDTTHGTLTSVKTTIMQEWDGLR--TTG------DRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEILRVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELETGAALSDMDLTSQ---------LRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEYGE 1056
            R++E++ ALAQ D+HE AL+ N + P DIGVTY MIGGL + KELLRQSITYPLKFPHLYSEGIAREAVKGVLL+GPPGTGKTMLAKAVATEGGA+FLSVDAS +ENKWLGESEKNA+AVFTLARRLAPCVI++DEVDS+LSSRE   DD+ HGTLTSVKTT+M EWDGL   T G      DRVVVI STNRPFDLDEAVLRR PRRI+VDLPD+ETR EIL VT++ NR+  +V+   IAE LEG+TGSD+KEVCREAVV+I+HE+A+ L+ G  L D D  +          LR VT +DF+ A ++L  SVSE GREL RVWEWNDEYGE
Sbjct:   12 RSKEDLMALAQ-DKHERALIPNCVSPNDIGVTYDMIGGLTDVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLYGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGKGDAGSDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLETRREILEVTLSENRLGSDVNLTMIAERLEGYTGSDLKEVCREAVVQISHEQARMLDRGELLDDSDDETDGFTGAGFQMLRPVTMKDFESAMRKLKRSVSETGRELQRVWEWNDEYGE 344

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|161986 vs. uniprot

BLAST of jgi.p|Trimin1|161986 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z438_9STRA	4.240e-260	100.00	P-loop containing nucleoside triphosphate hydrolas...	[more]
D8LRV8_ECTSI	3.100e-202	81.84	AAA domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KCX2_9PHAE	1.110e-171	82.26	AAA domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A7S2FC78_9STRA	1.100e-159	70.17	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2Y6R9_9STRA	1.560e-155	67.65	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
W7TKE8_9STRA	3.750e-154	66.11	Katanin p60 atpase-containing subunit n=1 Tax=Nann...	[more]
A0A1Z5JHE7_FISSO	1.870e-152	72.51	AAA domain-containing protein n=2 Tax=Fistulifera ...	[more]
A0A7R9UC12_9STRA	8.340e-152	71.81	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7R9VXH1_9STRA	2.450e-151	68.47	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]
B8BRR4_THAPS	4.810e-151	70.36	AAA domain-containing protein (Fragment) n=1 Tax=T...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_19	contig	Contig_19:803241..810193 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|161986\|e_gw1.19.172.1
Description	ATP binding
COG category	O
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG0464@1\|root,KOG0737@2759\|Eukaryota
Evalue	5.08e-203
Seed ortholog	2880.D8LRV8
Hectar predicted targeting category	other localisation
Ec32 ortholog description	P-loop containing nucleoside triphosphate hydrolase
Ec32 ortholog	Ec-08_002610.1
TranscriptId	162308
Track	FilteredModels1
ProteinId	161986

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|161986	gene_5528	Tribonema minus UTEX_B_3156	gene	Contig_19 803241..810193 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|161986	Trimin1\|161986\|e_gw1.19.172.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_19 803241..810193 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5528_8	exon_5528_8	Tribonema minus UTEX_B_3156	exon	Contig_19 803241..803381 -
exon_5528_7	exon_5528_7	Tribonema minus UTEX_B_3156	exon	Contig_19 803937..804014 -
exon_5528_6	exon_5528_6	Tribonema minus UTEX_B_3156	exon	Contig_19 804867..805025 -
exon_5528_5	exon_5528_5	Tribonema minus UTEX_B_3156	exon	Contig_19 805560..805691 -
exon_5528_4	exon_5528_4	Tribonema minus UTEX_B_3156	exon	Contig_19 806717..806800 -
exon_5528_3	exon_5528_3	Tribonema minus UTEX_B_3156	exon	Contig_19 807644..807775 -
exon_5528_2	exon_5528_2	Tribonema minus UTEX_B_3156	exon	Contig_19 808780..809040 -
exon_5528_1	exon_5528_1	Tribonema minus UTEX_B_3156	exon	Contig_19 810071..810193 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5528	CDS_5528	Tribonema minus UTEX_B_3156	CDS	Contig_19 810071..810193 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_19:803241..810193-
coding sequence from alignment at Contig_19:803241..810193-

spliced messenger RNA

>mRNA_5528 ID=mRNA_5528|Name=jgi.p|Trimin1|161986|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1110bp|location=Sequence derived from alignment at Contig_19:803241..810193- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGACCAATGCGCAGGGGCGCGCGCTGCTGTCGTGGCGCAGCGTGGA
GGCGGCGTTCGCGTCGGTGTGCAAGGCGCATGTGCCGCGCCCTGGGCAGC
CGATGGCGCGCACGCGGGAGGAGGTGGCAGCGCTCGCCCAGGCGGACCGC
CACGAGTCCGCGCTCATGGCCAACGTCATCCTCCCCAAGGACATTGGCGT
AACGTACAGCATGATCGGCGGCCTCAAGGAGGCCAAGGAGCTGCTGCGCC
AGTCCATCACGTACCCGCTCAAGTTCCCGCACCTGTACAGCGAGGGCATT
GCGCGCGAGGCTGTGAAAGGCGTGCTGCTCTTCGGGCCGCCCGGCACCGG
CAAGACCATGCTCGCCAAGGCCGTCGCGACCGAGGGGGGTGCGACGTTCC
TGAGCGTTGATGCCAGCGTGATTGAGAACAAGTGGCTGGGGGAGAGCGAG
AAAAATGCGCGCGCGGTGTTCACCCTCGCACGCCGGCTTGCACCCTGCGT
CATCTACCTCGATGAGGTGGACTCGGTGCTCAGCAGCCGCGAGCGCTACG
ACGACACCACGCATGGCACGCTCACCAGCGTCAAGACCACCATCATGCAG
GAGTGGGATGGCCTGCGGACGACGGGCGACCGCGTGGTGGTGATTGCCAG
CACCAACCGACCATTTGATCTTGATGAGGCAGTGCTCAGGCGGTTGCCGC
GCCGCATCATGGTCGACCTGCCGGACATTGAGACGCGCGAAGAGATTCTG
CGCGTGACCATGGCCGCCAACAGGGTCGACCCCAACGTCGACTTCCGCGC
CATTGCGGAGACGCTAGAGGGCTTCACAGGCAGCGACATCAAAGAGGTGT
GCAGGGAGGCTGTTGTGCGCATCGCGCACGAGAAGGCGCAGGAGCTCGAA
ACTGGCGCAGCGCTCAGCGACATGGACCTGACTTCGCAGCTGCGGTGCGT
CACCGCTGAGGACTTCCAGGAAGCACGCAAGCGCCTGACCACGTCCGTCA
GCGAGAAGGGCCGCGAGCTTGCGCGCGTATGGGAGTGGAATGACGAGTAC
GGGGAGATCAAGAAGAAGGGGTCCGAGACCCCCCGTCACAACCTCGCCAT
GTACCTCTAG

protein sequence of jgi.p|Trimin1|161986

>Trimin1|161986|e_gw1.19.172.1 ID=Trimin1|161986|e_gw1.19.172.1|Name=jgi.p|Trimin1|161986|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=370bp
METNAQGRALLSWRSVEAAFASVCKAHVPRPGQPMARTREEVAALAQADR
HESALMANVILPKDIGVTYSMIGGLKEAKELLRQSITYPLKFPHLYSEGI
AREAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIENKWLGESE
KNARAVFTLARRLAPCVIYLDEVDSVLSSRERYDDTTHGTLTSVKTTIMQ
EWDGLRTTGDRVVVIASTNRPFDLDEAVLRRLPRRIMVDLPDIETREEIL
RVTMAANRVDPNVDFRAIAETLEGFTGSDIKEVCREAVVRIAHEKAQELE
TGAALSDMDLTSQLRCVTAEDFQEARKRLTTSVSEKGRELARVWEWNDEY
GEIKKKGSETPRHNLAMYL*

mRNA from alignment at Contig_19:803241..810193-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5528 ID=mRNA_5528|Name=jgi.p|Trimin1|161986|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6953bp|location=Sequence derived from alignment at Contig_19:803241..810193- (Tribonema minus UTEX_B_3156 )
ATGGAGACCAATGCGCAGGGGCGCGCGCTGCTGTCGTGGCGCAGCGTGGA
GGCGGCGTTCGCGTCGGTGTGCAAGGCGCATGTGCCGCGCCCTGGGCAGC
CGATGGCGCGCACGCGGGAGGAGGTAAGGGCGATGCAGAGCATGCGTGAG
ATGCACTCGTTCGGTTTGCAAGGCACACCGCAGCAGTGGAGGTACAATGC
GGGCGGAGGCGCAGTGCAGTTGCCGCACGAGGCTCTCTGCACATGTGCCT
GCCACGTGCACCTCGTTGTTGAGGTCATGTTGCTGAAGCAGGGCGTAGAG
AAAGCAAGGCGCCACGCGTACCACGTGCGGGAAGGAGGAGCATCCGCCTG
TCGTCATCAGCCTCGGCGGCTGCACAAGTCCGTCGCGCAACTGGCCGAGG
TCTCCCTCCTCTGAGGTGGCTGCACTGGTGCAGTCTGTCGCCACCTTCAT
GCATCTTATACTTTGTGAAGTACTGTGCTCATGGGAGCACCAGCCTGCAG
GTATCGGCAGGTACACGGGTCGCTCACGCTGCTGGCCGGGCTTTCCGACC
TCTCAGGTGGCAGTGCCCCGTGCAGGCAGATCACCACCATCATCGCTCAG
GCGGTGCACTCGCCGACAGGGTTGACAAAATACGGTCGGTTCTACGTCAT
ACATATGGTATATACGTATACTGCCCTGATAAGCTTATACATACGGTATA
TACGGTTACCGCAAACTTCAACTTTAACTTCACATTTAACTTCAGTTGAT
TTTCTTCCTTGATTTTGCCGCGGTGCGTGAGGGCTGTGTGCGGTTGCCGA
GCATAGTTTTGCTTGACGAGCACGAGCTGCGCGCTTCATGTCGTATATGA
ATGCTCAATGCAGGCATTGTACCACCATCTGTGCTCTGTATCCCGGCTGC
GCTGCCCGAGCGGGGTACTGCTTGCCTGCACCGGTCCGTATGTTCGTCCT
GGCGGGATTCATACGCACGCTCATACGGTATGTACGGTTCATACGGCGTA
GGCCGTATATGTCAACCCTGCTTGCAGATGCACTTTGGTGAATGTTCTGG
TGGCTGCGCTCACGCACTGCGCTTCTCAATGAGCACTCGGCGAACCGCCA
GGTGGCACCGCTCACGCAGCACACTCCGCGATGAACTCTTGGTGAACCGT
CAGGTGGCAGCGCTCGCCCAGGCGGACCGCCACGAGTCCGCGCTCATGGC
CAACGTCATCCTCCCCAAGGACATTGGCGTAACGTACAGCATGATCGGCG
GCCTCAAGGAGGCCAAGGAGCTGCTGCGCCAGTCCATCACGTACCCGCTC
AAGTTCCCGCACCTGTACAGCGAGGGCATTGCGCGCGAGGCTGTGAAAGG
CGTGCTGCTCTTCGGGCCGCCCGGCACCGGCAAGACCATGCTCGCCAAGG
CCGTCGCGACCGAGGTGCGTGCGTGCTGTAGCATGATGCGCCCTTGTGAT
TATCATGGTCAAAGTCAAAACTAGTGGTATTTTCCAAGGGTGTTGCAACC
AAGGTGCGTGGGCGCCGTTACATGCACCATTGGTGCGAGTGCATAGTAGG
TAGTGTGGGACAAAGAACGCCCCTGTGGCCTGCCTAGCACGGGCAAGACC
ATGCTCGTCAAGGCCGTCGCGACCGGGGTGCGCGCGTGCGGTCGCACGCA
GCATGCGCCTGTCGTTATTATCATGGTGGGGTCTAAGTTGAAGTTAGTGG
TATTATGATATACTTCACATTTTCATCAATAGATAGTGTGGGGATTGCGT
GTGGGGGGTGCTGCTGCGGCCAACCTGGCATGGGGCCCGATACTATGTTG
CCAAGGCCGTCGCTACTGAGGTGCGTGCATGCCGCTACTTGCACATCAGC
GCGGCACAGCAGCAATTAATCTGTGTGTTGAGAACGCTGGTTTGGCCTGC
CCGGCACTGGCAAGACCATGCTCGCCAAGGCTGTCGCCACTGAGGTGCGT
GCATGCTCTATTGGTCGTGCCGTGCTCTTAACTCTAGATTGTGGCGCGTG
CATGGCAGTGTGGGGGATTGCGTGTCGACGGTGGCACGTTGAGCACTGCA
CCCACTTGAAATTGGCGCTCAAGCAGCCTGGTACAGGGCGGCACGCGGTG
CGGATCTATTCTCCCTGAAATGAGCGGGGAGAGGCTTGTGAACGACGGTG
GCAGGCCCACGAACATGTTGTGGAGAAGTGATTGCATCAGTTTCCGCTGC
CGTCTCTGTGTTCTTAGTGTTGCGCGATTGCAGAAGGCATTGCACTGCGA
GACGTCCTCGTAGTTGGCCCACCTGCACGAGAGGGCGCGCGCGTCACTGC
GTGCCCTTGGCGCACTGAAGCGGCTCACGCGCAATCCTACACCTGTGATA
AATCAACCAACCGCCTTACTCACTCAGACACATTTGCCCTCTGTCTCATT
TCATACTATGTGCTTCAGGGGGGTGCGACGTTCCTGAGCGTTGATGCCAG
CGTGATTGAGAACAAGTGGCTGGGGGAGAGCGAGAAAAATGCGCGCGCGG
TGTTCACCCTCGCACGCCGGCTTGCACCCTGCGTCATCTACCTCGATGAG
GTGAGTTGAAGTTGACATTGAAGTTGAATGGCTGAGGTTACTGGCGCTGC
TCGCGCGCCGGCTCGCGTCCTGCATCACCTACATCGATGAGGTGAGAAAT
ATCACTTGTACGTCCTGCATCGCATGGGCTGAGCACACGCATTGAAGTCG
GCTTTGAAGTTGTTGTAAGCCAGCAATGCCTGTTTCTGTATGGAAGGCTG
GAGGGACAGCGGCAGTAGAGTTGGGGTTGTTGCAGAAGAAGGGTCAGGAT
TAATTGACGTCAAATCTAACCTTGAGGGGTTGAAGTAGCGATCAGAGCTT
CCGAACGACACGGTTAGCCGGTGACCCCAATCTGGGCAAAGCGAGCGATC
AACTGAACGACATCAAATTTGATGCAAACCTGTCTGATTTTGGTCAATCC
TTTCGTCTCACACCTGCAGCTGAGCTGTAAGTGGTTTCAGCATGGACGCT
AGCGCCACCGCAGTGCCCAACAAATTTGTCGATCAATTCTACAACAGCTC
TATGCGCACGTTAACTTTGTGGCCAATCCTCGGTTCCGTTTGGTTAAACT
GGCCCAAGCAGTTGACGTTTGAACAACACCGTTTGATAAATCTCAGTAGG
AAACTCTGGTGGCAGGGATCACGTTCTGTGTTGGCTGTGAAACTGTGCCC
CTGCCCTAGAGAACATACTGAAGATTGTTCAAGAATTGGGGTCAGGGTTA
GCTTGCTGACGAGAGAGCGGTGCTTATGTCATCTGTTTTTTTTCTCTTCA
TTTCTACTGTGCTTGTAACAGCAGTGCAGAGGCTCATCTGTGAATTTTTG
TTGTTGCATATTCACTGTTTTGTTGTTGCGTGGCACGGCTCAGGTGGACT
CGGTGCTCAGCAGCCGCGAGCGCTACGACGACACCACGCATGGCACGCTC
ACCAGCGTCAAGACCACCATCATGCAGGTGAGTGTTCGGAGCGCTGCTTT
GTTTGGGGTCTCGTTGATGATGTTTTTTGTTTTGTTTTGTTTTTGTGCCG
GCCGCTGAGACCTGCAAGAGATACTGTAAGTTTGTTTCAGAGTGATCATC
AGGCGGTCCAGCCCGCCAGCCTTTTGGGTTAGGTTCTGAAAACCAGCTAG
TCTCTTGTCATCATGCACGTGACAATCCGAGGCATTGCTCAGCTGAAGGT
TTCATTGATGGCCCTGCATAATGTACCTGCACTCTGGTTGGCCGCGGAGA
CCAACCTTTGACCCTCTGCGCTTGTGTTTGTGTCATAGAGCAATCAGCAG
GCGATCCAACGCGTCAGTCTCGTGGTTAGGCACTAGGCTTTACTAGGCCA
CCCTTTGCAACTGCTCTCGTACTGCATCGTACTGCCGATCCAGTGCAAAC
AAAGTTTAGCAAGCACTCCGCCAGCGCCCAATATTGCTGATGGATAGCCG
AGCTGACAGGTATTCTGAATTGTGGTGCCCGACAAGATCGTAGTTGCTGA
ATAATTTTGTCCAGGTGCACTGAACATGTGCCGCTACCTGCATCGTCAAA
CCACTGTCCTCTGTTGGATCCGTGAATGCCATGTCCTTCAGCACTTATTC
GGTGAAGAGCTTACAAGGCGAGGGTGACACACCAAGCGGGCTATTCGTCA
CCCCACTGCACTAGGTGCAGCTCCAGCCGTGCCGCATAAACGCAAGCTCA
CACGCGCCTTGCCGTGCTCTGGCATGTGTGCTTTGACCGATGTTGTGAGA
TACACTCTGTAGCCTCTGGATGCTGTGGAGCAGTTGACAAGCGAACAGCT
CAGGGCTCTCGCATGATGAAGGGAAAAAAAAACGTACCATGCTGAATCGT
GCACACCCTAACACCGCTCTAATCTTGAATATTCAAAGATGCAAAACCTC
TCGCGTCACTGGTGCTGAGCCACTCTTCCCCACCAATATGCCTGTCAAGT
GACACTCATCAATTAAACTTCAACTTAACACTGCGTATTATCACTCGCGC
AGGAGTGGGATGGCCTGCGGACGACGGGCGACCGCGTGGTGGTGATTGCC
AGCACCAACCGACCATTTGATCTTGATGAGGCAGTGCTCAGGCGGTTGCC
GCGCCGCATCATGGTCGACCTGCCGGACATTGAGGTGAGAACGCATGTCA
CACACTTGTACACACTCATTGGATGTTTTGCTTCAGCGGTTTGCTTCCTT
TTTTAGCTGCATGACGAGGCAGTGCTCAGGCAGTTGCCGCACGGCGTCAC
GGTCGGCTTGCCGGACAAGGAGGCGAGAGCGGCGCGCAGCGGGCAGGGCG
ACGGCGCAACGAAAACACGTGGGTTGATCTCGTTGAGGCGGTTGTCAGAT
GGTTGCTGCTTGGGGCTAATGTTAGGGTCAGCATCAGGAGTAACCTGTTG
GGCATGGAGGTTAGAGCGGTTCACGGTACGGCAGGTGCCGGTACGCATGG
CGGACTCTATGGCTGTGTGCATGCCGCCCACCGCCCTCTCTTGCCCGCTT
GCCCGTCGGCAATTGCATGCACGCGCTGATGCTTGAGTGCCTTGGCATCA
ATACTGCCCGCTCGGTTCACAACTGTTTTTGGCTTGTCATATATATTGCT
CGCTTGCTTCACAACTGTCCGCGCTCCGCTTCTGCCGCACGCGCTGCCGC
CGTGCTGCCACTGCGCAGACGCGCGAAGAGATTCTGCGCGTGACCATGGC
CGCCAACAGGGTCGACCCCAACGTCGACTTCCGCGCCATTGCGGAGACGC
TAGAGGGCTTCACAGGCAGCGACATCAAAGAGGTGTGCAGGGAGGCTGTT
GTGCGCATCGCGCACGAGAAGGCGCAGGTGAGGGCTGTCACAGCGCTTAG
GCACTGTCAATTCGCATCGCAATGACAGGCTGTCTGTCCGCTCAGCCAAC
GTGGATGTCCGTTGAAATGACAGGCCTCCTCGACCGTGTACTGGCGTCAA
GAATTTGAGTGGGTGTCATGATCATCTTTTGCGATGCTCTGTGTGCTTAC
CACTACATAAAATGCTGCAGAACCTTTTCTCGACATCATCTGGGTTTTGA
CATGCGTAGTCTATCTCAGCCAACGTTTATTTTTGTTGTGATCGCAGGCC
TCCTGGAAGGTGGTCTGGTGTCGAGTCTGCGAGTAGGAGTCGTGATCGAT
CTGTTGCGATGCGCTGTGTGCCCGCACCACCAGATTGCTGCAGAGTCTGT
CATCGACCTGAGCTGGGTTTTTACATGTGTAGACTATACCAATGTCGCAA
CTGCCAACTGTACATGCTGCCGGGGTCTGTCACATGCTGAGGTGGTGCGA
GGGATTTAGTAGGCGGTGAGGGTGAGGGTGGGCACTCATGTTTGTGCATG
TGATTGCATTGTGCACACATGGCAGCGGTTGCAGAAGCGGCTCCGACGTC
CGATGCGCTGTGCTGTGCTTTGCTTAGTTGGTGGTTATGGCAATTTCGGC
GCGCTGCCGTAAGCCACAAAGAAATGGCCCATGTCAGATTCTCGGCTTGC
CTCATGACCTCATGACGGCGCAATCAGGCTGCGTAAAAAGACTGTAATGG
CAATGAAGGAGCAGCAGCGCTTATGTGCAAATGCGAGTTTGTGCACGTGA
CAGATAGTTGCACAGAGTACATGGCCCCGCATTGGTCTCATCGTGGCGCG
CCTGGCGGTCTCATTCGCTCGCTGCGCAGGAGCTCGAAACTGGCGCAGCG
CTCAGCGACATGGACCTGACTTCGCAGCTGCGGTGCGTCACCGCTGAGGA
CTTCCAGGTGCGCATATAGGGTGGTGTGCAGGTTCATGTGCATGGCAATG
ATCTGATTGATGCCCAGCGCTACATCGCCGCGTAGTGTACAGTTGCCACG
TCGCCCACTGCTCAGGCGCTTGGGGTTGGAAAGGGGCTTCAACATCCGAA
GGGATGGTGGTGGTGACAGGGGTATTATTTGTGCAGGGCAATATGTACAA
GGGGCTGCGGCAAGCGCAACATGGTCCCATTCGGCTCCATTTATGTATGC
TTTTTGACGTTGCGCAATGCAAAGCGTCTACTCAAAACATCACAGTGCAC
CAAAACCCATTGCACTTCACGTTTACTCCTTGCGAGCGACATCACCGCTG
GCATCGGCCGCAGACGCCTCGCACAACCCTGCACATTTGCCCTGGTCTTG
CAGGAAGCGCGCATGCGCATGACCACATCCATCAACGATGATAACCCCCC
TTCCGCTGTGGTTGCCATTGCTGTTAGGGTTCAGGTTGGGGCCAACGTTT
TCACATCCCACTCACAGCGCCCCTGCGCTTGCACCCCCCCTGCCCGCCCC
GTTATCGCGCAGGAAGCACGCAAGCGCCTGACCACGTCCGTCAGCGAGAA
GGGCCGCGAGCTTGCGCGCGTATGGGAGTGGAATGACGAGTACGGGGAGA
TCAAGAAGAAGGGGTCCGAGACCCCCCGTCACAACCTCGCCATGTACCTC
TAG

Coding sequence (CDS) from alignment at Contig_19:803241..810193-

>mRNA_5528 ID=mRNA_5528|Name=jgi.p|Trimin1|161986|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1110bp|location=Sequence derived from alignment at Contig_19:803241..810193- (Tribonema minus UTEX_B_3156 )
ATGGAGACCAATGCGCAGGGGCGCGCGCTGCTGTCGTGGCGCAGCGTGGA
GGCGGCGTTCGCGTCGGTGTGCAAGGCGCATGTGCCGCGCCCTGGGCAGC
CGATGGCGCGCACGCGGGAGGAGGTGGCAGCGCTCGCCCAGGCGGACCGC
CACGAGTCCGCGCTCATGGCCAACGTCATCCTCCCCAAGGACATTGGCGT
AACGTACAGCATGATCGGCGGCCTCAAGGAGGCCAAGGAGCTGCTGCGCC
AGTCCATCACGTACCCGCTCAAGTTCCCGCACCTGTACAGCGAGGGCATT
GCGCGCGAGGCTGTGAAAGGCGTGCTGCTCTTCGGGCCGCCCGGCACCGG
CAAGACCATGCTCGCCAAGGCCGTCGCGACCGAGGGGGGTGCGACGTTCC
TGAGCGTTGATGCCAGCGTGATTGAGAACAAGTGGCTGGGGGAGAGCGAG
AAAAATGCGCGCGCGGTGTTCACCCTCGCACGCCGGCTTGCACCCTGCGT
CATCTACCTCGATGAGGTGGACTCGGTGCTCAGCAGCCGCGAGCGCTACG
ACGACACCACGCATGGCACGCTCACCAGCGTCAAGACCACCATCATGCAG
GAGTGGGATGGCCTGCGGACGACGGGCGACCGCGTGGTGGTGATTGCCAG
CACCAACCGACCATTTGATCTTGATGAGGCAGTGCTCAGGCGGTTGCCGC
GCCGCATCATGGTCGACCTGCCGGACATTGAGACGCGCGAAGAGATTCTG
CGCGTGACCATGGCCGCCAACAGGGTCGACCCCAACGTCGACTTCCGCGC
CATTGCGGAGACGCTAGAGGGCTTCACAGGCAGCGACATCAAAGAGGTGT
GCAGGGAGGCTGTTGTGCGCATCGCGCACGAGAAGGCGCAGGAGCTCGAA
ACTGGCGCAGCGCTCAGCGACATGGACCTGACTTCGCAGCTGCGGTGCGT
CACCGCTGAGGACTTCCAGGAAGCACGCAAGCGCCTGACCACGTCCGTCA
GCGAGAAGGGCCGCGAGCTTGCGCGCGTATGGGAGTGGAATGACGAGTAC
GGGGAGATCAAGAAGAAGGGGTCCGAGACCCCCCGTCACAACCTCGCCAT
GTACCTCTAG