mRNA_5427 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164222
Unique NamemRNA_5427
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A836CGC3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC3_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 2.100e-156
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
Query:    1 VACLPLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISEASC 648
            VACLPLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISEASC
Sbjct:    1 VACLPLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISEASC 216          
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A835YXR6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR6_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.480e-93
Identity = 135/195 (69.23%), Postives = 161/195 (82.56%), Query Frame = 1
Query:   49 RGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLI 633
            RGSL  + N+PN W++ TP +R+QVL+D+AEGM FLH++NVYHRDLKSHNVLIT+WGRAKLTDFGLSKTT+AVSSFTGRSTMGGG VA+M PE+FG    SA  S+KSDVYSY IVTWEVLAG CG   STPWYG++IVEVI+AV++RGE PPL  ECI + NVS AE HA +M+RCWAA    RPTF +L+ L+
Sbjct:    2 RGSLRKVLNDPNTWRQFTPPMRNQVLMDVAEGMEFLHAHNVYHRDLKSHNVLITEWGRAKLTDFGLSKTTNAVSSFTGRSTMGGGTVAWMPPESFGKRLSSALSSSKSDVYSYSIVTWEVLAGTCGVDMSTPWYGKAIVEVIAAVSMRGERPPLADECIEDTNVSRAELHADIMQRCWAADPADRPTFSDLLALM 196          
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A836CB95_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB95_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.080e-77
Identity = 124/205 (60.49%), Postives = 147/205 (71.71%), Query Frame = 1
Query:   28 VLLQFMARGSLCHIFNEPNIWQR-VTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639
            +L+++M RGSL  + ++ + WQ+  TP +RHQVL DIA GM FLH N V+H DLKS NVLITDWGRAKLTDFGLS+TT AVSSFTGRST+ GG VA+MAPEAF   R SA   A SDVYSY IVTWEVLAG  G   + PW G SIV+VI+AV +RGE PPLP  C+ N NV+ A  H  +MRRCWAA    R  F E++  I  
Sbjct:   40 ILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIGS 244          
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A835YLW5_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW5_9STRA)

HSP 1 Score: 202 bits (513), Expect = 3.220e-63
Identity = 101/144 (70.14%), Postives = 116/144 (80.56%), Query Frame = 1
Query:  190 SHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGEL 621
            SHNVLIT+WGRAKLTDFGLS+ TSAVSSFTGRST+ GG VA+MAPE+FG  + SAS+SA SD+YSYGIVTWEVLAG+ G A STPWYG+S+VEVISAVT+ GE  PL   C+ N N+S A  H  VMRRCW+A    RPTF EL
Sbjct:    1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 144          
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A835YN29_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN29_9STRA)

HSP 1 Score: 185 bits (470), Expect = 3.150e-55
Identity = 101/205 (49.27%), Postives = 138/205 (67.32%), Query Frame = 1
Query:   28 VLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFT-GRSTMGGGMVAYMAPEAF-----GNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAG--STPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGE 618
            +++Q+M RGSL  +    N W+ VTP +RH++L D+A+GM +LH  NVYHRDLKSHNVL+TD  RA LTDFG+SKT SA+++ T  +ST  GG +A+ APE F     G  R  ++ + KSDVYSYGIV WEVL     RA   +  W  Q + E+++AV LRG+ PPLP + + + NV+ A +H  +MRRC AA   +RP+F E
Sbjct:   43 LVMQYMRRGSLNRVLCSENAWREVTPEMRHRLLCDVAQGMQYLHDRNVYHRDLKSHNVLLTDDWRAVLTDFGMSKTCSAITAATHAKSTYAGGTLAWTAPEVFKPRVGGGHR--SNFTFKSDVYSYGIVVWEVLVADAARAAPQARRWIQQQMGELVAAV-LRGDQPPLPADSVSDANVARAASHEALMRRCLAAEPEARPSFRE 244          
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A835Z605_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z605_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.590e-48
Identity = 100/209 (47.85%), Postives = 129/209 (61.72%), Query Frame = 1
Query:   28 VLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGG---GMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIV--NKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639
            +++++M RGSL  + N   +W  VTP +RHQ+L D+AEGM +LH N +YHRDLKSHNVLI D  RAKL+DFGLS+T S ++SF+     G    G + +M PE F      A    K DVYSYG+V WEVLAG  G   +TPW      ++I+AV LRGE P LP  C V  + NV  A  H G+M  C AA+   RPTF E+   + E
Sbjct:  985 LVMEYMRRGSLRKLLNSLELWAEVTPRMRHQMLSDVAEGMQYLHYNGIYHRDLKSHNVLIGDDFRAKLSDFGLSRTASTITSFSSGRCGGXXXXGTLNWMPPECFDASAAGADAP-KRDVYSYGMVVWEVLAGEAGPEANTPWGRTPPAQLIAAV-LRGERPALPACCDVRGDANVRRAPLHRGIMAACLAAAPAERPTFDEIARTLDE 1191          
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: B9HZI8_POPTR (Protein kinase domain-containing protein n=24 Tax=rosids TaxID=71275 RepID=B9HZI8_POPTR)

HSP 1 Score: 112 bits (280), Expect = 7.720e-26
Identity = 70/205 (34.15%), Postives = 104/205 (50.73%), Query Frame = 1
Query:   25 CVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639
            C++ ++M++G+L    N+   +   T  +  ++ LDI+ GM +LHS  V HRDLKS+N+L+ D  R K+ DFG S   +      G      G   +MAPE    + CS  V    DVYS+GIV WE+   +    G TP      V+   AV  + E PPLP  C          A A +++RCWAA+   RP F  ++  + +
Sbjct:  151 CIITEYMSQGTLRMYLNKKEPYSLSTETIL-RLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCQETKGNK----GTYRWMAPEMIKEKHCSRKV----DVYSFGIVLWELTTALLPFQGMTP------VQAAFAVAEKNERPPLPASC--------QPALAHLIKRCWAANPSKRPDFSHIVSALEK 332          
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: M5WM16_PRUPE (Protein kinase domain-containing protein n=7 Tax=Pentapetalae TaxID=1437201 RepID=M5WM16_PRUPE)

HSP 1 Score: 109 bits (273), Expect = 7.880e-25
Identity = 68/205 (33.17%), Postives = 105/205 (51.22%), Query Frame = 1
Query:   25 CVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639
            C++ ++M++G+L    N+   +   T  +  ++ LDI+ GM +LHS  V HRDLKS+N+L+ D  R K+ DFG S   +      G      G   +MAPE    + C+  V    DVYS+GIV WE+   +    G TP      V+   AV  + E PP+P  C          A A +++RCWAA+   RP F +++  + +
Sbjct:  151 CIITEYMSQGTLRMYLNKKEPYSLSTETIL-RLALDISRGMEYLHSQGVIHRDLKSNNLLLNDDMRVKVADFGTSCLETQCRETKGNK----GTYRWMAPEMIKEKPCTRKV----DVYSFGIVLWELTTALLPFQGMTP------VQAAFAVAEKNERPPMPASC--------QPALAHLIKRCWAANPSKRPDFSDIVSALEK 332          
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A251S652_HELAN (Putative serine/threonine-protein kinase HT1 n=7 Tax=Asteraceae TaxID=4210 RepID=A0A251S652_HELAN)

HSP 1 Score: 108 bits (271), Expect = 1.500e-24
Identity = 71/205 (34.63%), Postives = 106/205 (51.71%), Query Frame = 1
Query:   25 CVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639
            C++ ++M++G+L    N+   +   T  +  ++ LDI+ GM +LHS  V HRDLKS+N+L+ D  R K+ DFG    TS + + T  S    G   +MAPE    +  +  V    DVYS+GIV WE+   +    G TP      V+   AV  + E PPLP  C          A A +++RCWAA    RP F E++  + +
Sbjct:  150 CIITEYMSQGTLRMYLNKKEPYSLSTETVL-RLALDISRGMEYLHSQGVVHRDLKSNNLLLNDEMRVKVADFG----TSCLETQTQESKGNMGTYRWMAPEMVKEKPYTRKV----DVYSFGIVLWELTTALLPFQGMTP------VQAAFAVAEKNERPPLPASC--------QPALAHLIKRCWAAEPSKRPDFTEIVQALEK 331          
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: F0W647_9STRA (Protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W647_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.140e-24
Identity = 74/216 (34.26%), Postives = 111/216 (51.39%), Query Frame = 1
Query:    4 ACL-PLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLH--SNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISEA 642
            AC+ P N  ++++    GSL ++         +TP +R + LLD A+GM +LH     + HRDLKS N+L+      K++DFGL++  + V + TG      G V +MAPE  GN + +     K+DV+S+GIV WEV+ G C      P+ G S V+    V  R   P +P  C              +MR CW   A  RP+F +++  +SEA
Sbjct:  181 ACMEPPNRAIVVELCQGGSLWNVLRLKR--HSLTPKMRTKFLLDTAKGMSYLHHFKQPILHRDLKSPNLLVDSDYTIKISDFGLARVKAHVQTMTGNC----GTVQWMAPEVLGNLKYTE----KADVFSFGIVVWEVMTGEC------PYEGLSQVQAALGVLSRNLRPGIPKNC--------PPFFQRLMRSCWDRQADLRPSFSQIIVALSEA 372          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGC3_9STRA2.100e-156100.00Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YXR6_9STRA1.480e-9369.23Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A836CB95_9STRA1.080e-7760.49Kinase-like domain-containing protein n=2 Tax=Trib... [more]
A0A835YLW5_9STRA3.220e-6370.14Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YN29_9STRA3.150e-5549.27Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835Z605_9STRA1.590e-4847.85Protein kinase domain-containing protein n=1 Tax=T... [more]
B9HZI8_POPTR7.720e-2634.15Protein kinase domain-containing protein n=24 Tax=... [more]
M5WM16_PRUPE7.880e-2533.17Protein kinase domain-containing protein n=7 Tax=P... [more]
A0A251S652_HELAN1.500e-2434.63Putative serine/threonine-protein kinase HT1 n=7 T... [more]
F0W647_9STRA2.140e-2434.26Protein kinase putative n=1 Tax=Albugo laibachii N... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_30contigContig_30:889021..890233 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164222|e_gw1.30.74.1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944
Preferred nameRCCD1
Descriptionguanyl-nucleotide exchange factor activity
COG categoryDZ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0515@1|root,COG5184@1|root,KOG0192@2759|Eukaryota,KOG1426@2759|Eukaryota
Evalue2.82e-30
Seed ortholog2880.D7FKP6
Hectar predicted targeting categorysignal peptide
TranscriptId164544
TrackFilteredModels1
ProteinId164222
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164222gene_5427Tribonema minus UTEX_B_3156 geneContig_30 889021..890233 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164222Trimin1|164222|e_gw1.30.74.1Tribonema minus UTEX_B_3156 polypeptideContig_30 889021..890233 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5427_2exon_5427_2Tribonema minus UTEX_B_3156 exonContig_30 889021..889480 -
exon_5427_1exon_5427_1Tribonema minus UTEX_B_3156 exonContig_30 890043..890233 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5427CDS_5427Tribonema minus UTEX_B_3156 CDSContig_30 890043..890233 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5427 ID=mRNA_5427|Name=jgi.p|Trimin1|164222|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=651bp|location=Sequence derived from alignment at Contig_30:889021..890233- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTTGCATGCTTGCCCCTCAACACATGTGTTTTGTTGCAGTTCATGGCTCG
AGGCAGCTTGTGCCACATTTTCAATGAGCCAAACATCTGGCAACGCGTGA
CGCCCGCTCTGCGCCACCAAGTGCTGCTTGACATCGCCGAAGGTATGCAC
TTCCTCCACTCCAACAATGTATACCACAGGGACCTCAAGAGCCACAACGT
GCTCATCACTGACTGGGGCCGTGCCAAGCTGACCGACTTTGGCCTCTCCA
AGACCACCAGCGCCGTCAGCAGCTTCACAGGCAGGAGCACCATGGGCGGC
GGCATGGTGGCGTATATGGCCCCTGAAGCCTTTGGCAACGAGCGCTGCAG
CGCGTCCGTGTCTGCCAAGAGCGACGTCTACAGCTATGGCATTGTGACTT
GGGAGGTGCTGGCGGGCGTGTGTGGCCGTGCCGGCAGCACGCCATGGTAC
GGGCAGTCCATTGTGGAAGTCATCTCCGCAGTCACGCTGCGCGGCGAGAC
GCCGCCATTGCCAATGGAGTGCATCGTGAACAAGAACGTAAGCCATGCGG
AGGCTCACGCAGGCGTCATGCGGCGCTGCTGGGCTGCATCAGCGCTCAGC
AGGCCGACATTTGGCGAGCTGATGCCACTCATCAGCGAAGCGAGTTGCTA
G
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protein sequence of jgi.p|Trimin1|164222

>Trimin1|164222|e_gw1.30.74.1 ID=Trimin1|164222|e_gw1.30.74.1|Name=jgi.p|Trimin1|164222|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp
VACLPLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMH
FLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGG
GMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWY
GQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALS
RPTFGELMPLISEASC*
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mRNA from alignment at Contig_30:889021..890233-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5427 ID=mRNA_5427|Name=jgi.p|Trimin1|164222|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1213bp|location=Sequence derived from alignment at Contig_30:889021..890233- (Tribonema minus UTEX_B_3156 )
GTTGCATGCTTGCCCCTCAACACATGTGTTTTGTTGCAGTTCATGGCTCG AGGCAGCTTGTGCCACATTTTCAATGAGCCAAACATCTGGCAACGCGTGA CGCCCGCTCTGCGCCACCAAGTGCTGCTTGACATCGCCGAAGGTATGCAC TTCCTCCACTCCAACAATGTATACCACAGGGACCTCAAGAGGTGAGGTTT TAAGGATGTACTTCCAACCGCAGTGTGAGATGCTCAGCGCGCAGATGATG CCTCACAAGATTATTCTCAAAGTGCGTAGTGTACCGTACAAGCAAAATTC CAGTACTGTACTCTCAGGCGATGCTCAATGGGGATTTTGCGTATACTGGG GTGTGTACGGCCGTTCCGCTTTGTGTGGGCCAGAGGGACTTCGTGACATA CAGGAGGGTACCACGGAGGCTTTGCAAGACATACATGCACTGTACAGCAG TCTGTACCACAGGTTCTGATGACTCAAATATGCATTGTGTCAACAAAGCA AGATTCTCGCTGATGCTGGCGCTCAGAGGTAGCATCACAAACAGATGTAC CTTCTGCCATCCTCAATTTGATCGGCAGATAGGCTTGACAAGCACAGACA TGTATCGTGAGTGAAGCCCGGTACACCGTATATGCAGCAGACCCCATTTG GGCAATGCGCCCATGCCCACTGTCAGTCAACCTGCGTTTGACATGCTTCA AAAGTGAGCAACGAATGTACACTGATGTGCCTGTGGTGCATGTCGCCTCT CAGCCACAACGTGCTCATCACTGACTGGGGCCGTGCCAAGCTGACCGACT TTGGCCTCTCCAAGACCACCAGCGCCGTCAGCAGCTTCACAGGCAGGAGC ACCATGGGCGGCGGCATGGTGGCGTATATGGCCCCTGAAGCCTTTGGCAA CGAGCGCTGCAGCGCGTCCGTGTCTGCCAAGAGCGACGTCTACAGCTATG GCATTGTGACTTGGGAGGTGCTGGCGGGCGTGTGTGGCCGTGCCGGCAGC ACGCCATGGTACGGGCAGTCCATTGTGGAAGTCATCTCCGCAGTCACGCT GCGCGGCGAGACGCCGCCATTGCCAATGGAGTGCATCGTGAACAAGAACG TAAGCCATGCGGAGGCTCACGCAGGCGTCATGCGGCGCTGCTGGGCTGCA TCAGCGCTCAGCAGGCCGACATTTGGCGAGCTGATGCCACTCATCAGCGA AGCGAGTTGCTAG
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Coding sequence (CDS) from alignment at Contig_30:889021..890233-

>mRNA_5427 ID=mRNA_5427|Name=jgi.p|Trimin1|164222|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=651bp|location=Sequence derived from alignment at Contig_30:889021..890233- (Tribonema minus UTEX_B_3156 )
GTTGCATGCTTGCCCCTCAACACATGTGTTTTGTTGCAGTTCATGGCTCG
AGGCAGCTTGTGCCACATTTTCAATGAGCCAAACATCTGGCAACGCGTGA
CGCCCGCTCTGCGCCACCAAGTGCTGCTTGACATCGCCGAAGGTATGCAC
TTCCTCCACTCCAACAATGTATACCACAGGGACCTCAAGAGCCACAACGT
GCTCATCACTGACTGGGGCCGTGCCAAGCTGACCGACTTTGGCCTCTCCA
AGACCACCAGCGCCGTCAGCAGCTTCACAGGCAGGAGCACCATGGGCGGC
GGCATGGTGGCGTATATGGCCCCTGAAGCCTTTGGCAACGAGCGCTGCAG
CGCGTCCGTGTCTGCCAAGAGCGACGTCTACAGCTATGGCATTGTGACTT
GGGAGGTGCTGGCGGGCGTGTGTGGCCGTGCCGGCAGCACGCCATGGTAC
GGGCAGTCCATTGTGGAAGTCATCTCCGCAGTCACGCTGCGCGGCGAGAC
GCCGCCATTGCCAATGGAGTGCATCGTGAACAAGAACGTAAGCCATGCGG
AGGCTCACGCAGGCGTCATGCGGCGCTGCTGGGCTGCATCAGCGCTCAGC
AGGCCGACATTTGGCGAGCTGATGCCACTCATCAGCGAAGCGAGTTGCTA
G
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