mRNA_5427 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A836CGC3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC3_9STRA) HSP 1 Score: 440 bits (1132), Expect = 2.100e-156 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1 Query: 1 VACLPLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISEASC 648 VACLPLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISEASC Sbjct: 1 VACLPLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISEASC 216
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A835YXR6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR6_9STRA) HSP 1 Score: 281 bits (718), Expect = 1.480e-93 Identity = 135/195 (69.23%), Postives = 161/195 (82.56%), Query Frame = 1 Query: 49 RGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLI 633 RGSL + N+PN W++ TP +R+QVL+D+AEGM FLH++NVYHRDLKSHNVLIT+WGRAKLTDFGLSKTT+AVSSFTGRSTMGGG VA+M PE+FG SA S+KSDVYSY IVTWEVLAG CG STPWYG++IVEVI+AV++RGE PPL ECI + NVS AE HA +M+RCWAA RPTF +L+ L+ Sbjct: 2 RGSLRKVLNDPNTWRQFTPPMRNQVLMDVAEGMEFLHAHNVYHRDLKSHNVLITEWGRAKLTDFGLSKTTNAVSSFTGRSTMGGGTVAWMPPESFGKRLSSALSSSKSDVYSYSIVTWEVLAGTCGVDMSTPWYGKAIVEVIAAVSMRGERPPLADECIEDTNVSRAELHADIMQRCWAADPADRPTFSDLLALM 196
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A836CB95_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB95_9STRA) HSP 1 Score: 243 bits (619), Expect = 1.080e-77 Identity = 124/205 (60.49%), Postives = 147/205 (71.71%), Query Frame = 1 Query: 28 VLLQFMARGSLCHIFNEPNIWQR-VTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639 +L+++M RGSL + ++ + WQ+ TP +RHQVL DIA GM FLH N V+H DLKS NVLITDWGRAKLTDFGLS+TT AVSSFTGRST+ GG VA+MAPEAF R SA A SDVYSY IVTWEVLAG G + PW G SIV+VI+AV +RGE PPLP C+ N NV+ A H +MRRCWAA R F E++ I Sbjct: 40 ILMEYMMRGSLRRVLSDEHAWQQQFTPTMRHQVLCDIAAGMLFLHDNRVHHGDLKSQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEIVASIGS 244
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A835YLW5_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW5_9STRA) HSP 1 Score: 202 bits (513), Expect = 3.220e-63 Identity = 101/144 (70.14%), Postives = 116/144 (80.56%), Query Frame = 1 Query: 190 SHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGEL 621 SHNVLIT+WGRAKLTDFGLS+ TSAVSSFTGRST+ GG VA+MAPE+FG + SAS+SA SD+YSYGIVTWEVLAG+ G A STPWYG+S+VEVISAVT+ GE PL C+ N N+S A H VMRRCW+A RPTF EL Sbjct: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 144
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A835YN29_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN29_9STRA) HSP 1 Score: 185 bits (470), Expect = 3.150e-55 Identity = 101/205 (49.27%), Postives = 138/205 (67.32%), Query Frame = 1 Query: 28 VLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFT-GRSTMGGGMVAYMAPEAF-----GNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAG--STPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGE 618 +++Q+M RGSL + N W+ VTP +RH++L D+A+GM +LH NVYHRDLKSHNVL+TD RA LTDFG+SKT SA+++ T +ST GG +A+ APE F G R ++ + KSDVYSYGIV WEVL RA + W Q + E+++AV LRG+ PPLP + + + NV+ A +H +MRRC AA +RP+F E Sbjct: 43 LVMQYMRRGSLNRVLCSENAWREVTPEMRHRLLCDVAQGMQYLHDRNVYHRDLKSHNVLLTDDWRAVLTDFGMSKTCSAITAATHAKSTYAGGTLAWTAPEVFKPRVGGGHR--SNFTFKSDVYSYGIVVWEVLVADAARAAPQARRWIQQQMGELVAAV-LRGDQPPLPADSVSDANVARAASHEALMRRCLAAEPEARPSFRE 244
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A835Z605_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z605_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.590e-48 Identity = 100/209 (47.85%), Postives = 129/209 (61.72%), Query Frame = 1 Query: 28 VLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGG---GMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIV--NKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639 +++++M RGSL + N +W VTP +RHQ+L D+AEGM +LH N +YHRDLKSHNVLI D RAKL+DFGLS+T S ++SF+ G G + +M PE F A K DVYSYG+V WEVLAG G +TPW ++I+AV LRGE P LP C V + NV A H G+M C AA+ RPTF E+ + E Sbjct: 985 LVMEYMRRGSLRKLLNSLELWAEVTPRMRHQMLSDVAEGMQYLHYNGIYHRDLKSHNVLIGDDFRAKLSDFGLSRTASTITSFSSGRCGGXXXXGTLNWMPPECFDASAAGADAP-KRDVYSYGMVVWEVLAGEAGPEANTPWGRTPPAQLIAAV-LRGERPALPACCDVRGDANVRRAPLHRGIMAACLAAAPAERPTFDEIARTLDE 1191
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: B9HZI8_POPTR (Protein kinase domain-containing protein n=24 Tax=rosids TaxID=71275 RepID=B9HZI8_POPTR) HSP 1 Score: 112 bits (280), Expect = 7.720e-26 Identity = 70/205 (34.15%), Postives = 104/205 (50.73%), Query Frame = 1 Query: 25 CVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639 C++ ++M++G+L N+ + T + ++ LDI+ GM +LHS V HRDLKS+N+L+ D R K+ DFG S + G G +MAPE + CS V DVYS+GIV WE+ + G TP V+ AV + E PPLP C A A +++RCWAA+ RP F ++ + + Sbjct: 151 CIITEYMSQGTLRMYLNKKEPYSLSTETIL-RLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCQETKGNK----GTYRWMAPEMIKEKHCSRKV----DVYSFGIVLWELTTALLPFQGMTP------VQAAFAVAEKNERPPLPASC--------QPALAHLIKRCWAANPSKRPDFSHIVSALEK 332
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: M5WM16_PRUPE (Protein kinase domain-containing protein n=7 Tax=Pentapetalae TaxID=1437201 RepID=M5WM16_PRUPE) HSP 1 Score: 109 bits (273), Expect = 7.880e-25 Identity = 68/205 (33.17%), Postives = 105/205 (51.22%), Query Frame = 1 Query: 25 CVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639 C++ ++M++G+L N+ + T + ++ LDI+ GM +LHS V HRDLKS+N+L+ D R K+ DFG S + G G +MAPE + C+ V DVYS+GIV WE+ + G TP V+ AV + E PP+P C A A +++RCWAA+ RP F +++ + + Sbjct: 151 CIITEYMSQGTLRMYLNKKEPYSLSTETIL-RLALDISRGMEYLHSQGVIHRDLKSNNLLLNDDMRVKVADFGTSCLETQCRETKGNK----GTYRWMAPEMIKEKPCTRKV----DVYSFGIVLWELTTALLPFQGMTP------VQAAFAVAEKNERPPMPASC--------QPALAHLIKRCWAANPSKRPDFSDIVSALEK 332
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: A0A251S652_HELAN (Putative serine/threonine-protein kinase HT1 n=7 Tax=Asteraceae TaxID=4210 RepID=A0A251S652_HELAN) HSP 1 Score: 108 bits (271), Expect = 1.500e-24 Identity = 71/205 (34.63%), Postives = 106/205 (51.71%), Query Frame = 1 Query: 25 CVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLHSNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISE 639 C++ ++M++G+L N+ + T + ++ LDI+ GM +LHS V HRDLKS+N+L+ D R K+ DFG TS + + T S G +MAPE + + V DVYS+GIV WE+ + G TP V+ AV + E PPLP C A A +++RCWAA RP F E++ + + Sbjct: 150 CIITEYMSQGTLRMYLNKKEPYSLSTETVL-RLALDISRGMEYLHSQGVVHRDLKSNNLLLNDEMRVKVADFG----TSCLETQTQESKGNMGTYRWMAPEMVKEKPYTRKV----DVYSFGIVLWELTTALLPFQGMTP------VQAAFAVAEKNERPPLPASC--------QPALAHLIKRCWAAEPSKRPDFTEIVQALEK 331
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Match: F0W647_9STRA (Protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W647_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.140e-24 Identity = 74/216 (34.26%), Postives = 111/216 (51.39%), Query Frame = 1 Query: 4 ACL-PLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHFLH--SNNVYHRDLKSHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGELMPLISEA 642 AC+ P N ++++ GSL ++ +TP +R + LLD A+GM +LH + HRDLKS N+L+ K++DFGL++ + V + TG G V +MAPE GN + + K+DV+S+GIV WEV+ G C P+ G S V+ V R P +P C +MR CW A RP+F +++ +SEA Sbjct: 181 ACMEPPNRAIVVELCQGGSLWNVLRLKR--HSLTPKMRTKFLLDTAKGMSYLHHFKQPILHRDLKSPNLLVDSDYTIKISDFGLARVKAHVQTMTGNC----GTVQWMAPEVLGNLKYTE----KADVFSFGIVVWEVMTGEC------PYEGLSQVQAALGVLSRNLRPGIPKNC--------PPFFQRLMRSCWDRQADLRPSFSQIIVALSEA 372 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164222 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5427 ID=mRNA_5427|Name=jgi.p|Trimin1|164222|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=651bp|location=Sequence derived from alignment at Contig_30:889021..890233- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GTTGCATGCTTGCCCCTCAACACATGTGTTTTGTTGCAGTTCATGGCTCGback to top protein sequence of jgi.p|Trimin1|164222 >Trimin1|164222|e_gw1.30.74.1 ID=Trimin1|164222|e_gw1.30.74.1|Name=jgi.p|Trimin1|164222|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp VACLPLNTCVLLQFMARGSLCHIFNEPNIWQRVTPALRHQVLLDIAEGMHback to top mRNA from alignment at Contig_30:889021..890233- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5427 ID=mRNA_5427|Name=jgi.p|Trimin1|164222|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1213bp|location=Sequence derived from alignment at Contig_30:889021..890233- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_30:889021..890233- >mRNA_5427 ID=mRNA_5427|Name=jgi.p|Trimin1|164222|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=651bp|location=Sequence derived from alignment at Contig_30:889021..890233- (Tribonema minus UTEX_B_3156 )back to top |