mRNA_5410 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164295
Unique NamemRNA_5410
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: A0A836CEK3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEK3_9STRA)

HSP 1 Score: 644 bits (1660), Expect = 4.220e-233
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1
Query:    1 ANNEDHVEYDDLDDLTARHRRARKERVDSVSDTILEARRLHLRRIRDFEVDPETVEQLRKLGLGRRKQPLDNRAFTKKWLNNKQVATGMGAGGFAVHLGSASKDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKPPILPVCGHTGAGVTALWENMRTRSLREPGSLVSSIEAARRVREAKLEKDRLKLQHTRTR 987
            ANNEDHVEYDDLDDLTARHRRARKERVDSVSDTILEARRLHLRRIRDFEVDPETVEQLRKLGLGRRKQPLDNRAFTKKWLNNKQVATGMGAGGFAVHLGSASKDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKPPILPVCGHTGAGVTALWENMRTRSLREPGSLVSSIEAARRVREAKLEKDRLKLQHTRTR
Sbjct:    1 ANNEDHVEYDDLDDLTARHRRARKERVDSVSDTILEARRLHLRRIRDFEVDPETVEQLRKLGLGRRKQPLDNRAFTKKWLNNKQVATGMGAGGFAVHLGSASKDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKPPILPVCGHTGAGVTALWENMRTRSLREPGSLVSSIEAARRVREAKLEKDRLKLQHTRTR 329          
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: D7FIT5_ECTSI (YihA3, YihA/EngB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT5_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 2.920e-94
Identity = 162/298 (54.36%), Postives = 204/298 (68.46%), Query Frame = 1
Query:   61 RARKERVDSVSDTILEARRLHLRRIRDFEVDPETVEQLRKLGLGRRKQPLDNRAFTKKW-LNNKQVATGMGAGGFAVHLGSASKDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDI-GAKLLAKPPILPVCGHTGAGVTALWENMRTRSLREPGSLVSSIEA---ARRVRE 939
            R RKER DSV+D+I++ R  HL R+   EVD    +  +   LG RK+P     F K +    KQV +   AGGFA  +GSASK WP F+H LPEVALAGHTNCGKSTLVNAL+GIHPR+G A  S+RAGWTD V FYQ+GKKPPVLT+VDLPGYGHAVA R   + W RM K+Y++  R++L RCCVLVD TRG  EEDR LL  L +R I +Q+VLTK DLL PE L+  +  + +DL D+ G +  +  P   VCG +GAGVT LW+++  ++ + PGSLV+   A   AR+ RE
Sbjct:  106 RGRKERRDSVTDSIVKEREQHLVRLAKAEVDTAMAKTFKASSLGSRKRPRQAGGFNKAYDRTGKQVHSDFAAGGFARWMGSASKGWPTFRHRLPEVALAGHTNCGKSTLVNALSGIHPRRGPASTSDRAGWTDLVGFYQVGKKPPVLTMVDLPGYGHAVATRHAIKGWLRMIKEYIT-TRQELIRCCVLVDCTRGFCEEDRALLQLLAKRNIPYQIVLTKADLLTPELLSACVLLLRRDLSDLCGQEAGSTAPFSAVCGTSGAGVTTLWKDLAKQAAKAPGSLVAMQAAHLAARKARE 402          
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: A0A4D9CU55_9STRA (EngB-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU55_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.900e-63
Identity = 122/241 (50.62%), Postives = 162/241 (67.22%), Query Frame = 1
Query:  100 ILEARRLHLRRI----RDFEV---DPETVEQLRKLGLGRRKQPLDNRAFTKKWLNNKQVATGMGAGGFAVHLGSAS----KDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIG 789
            +LE RR HL RI    R+ E    DPE + ++ +LGLG++++  D   + +   +     + +GA GFA  + +AS    + WP FKH LPEVA AGH+NCGKS+LVNA+AG+ PR+G+A VS+RAGWTD V FYQ+G+KPPVLTL DLPGYGHAVA+   +R WR MT+ YL+  RR L  CCVLVD  RGL  ED  LL  L  R +  ++VLTKGDLL    LA+S + V +D+ ++G
Sbjct:    1 MLEDRRRHLARIAALAREDEAEGPDPEILRRINELGLGQKQRGKDTARYRRGPKDMTAGPSQIGATGFATFMAAASGRGSEGWPFFKHMLPEVAFAGHSNCGKSSLVNAVAGMVPRRGVARVSDRAGWTDAVFFYQLGRKPPVLTLADLPGYGHAVASVQQKRRWREMTQSYLA-TRRVLSVCCVLVDCVRGLCREDGDLLKALRARDVAVKVVLTKGDLLDEMDLARSHSLVVRDMREMG 240          
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: A0A7S3M560_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M560_9STRA)

HSP 1 Score: 219 bits (559), Expect = 4.580e-63
Identity = 123/244 (50.41%), Postives = 162/244 (66.39%), Query Frame = 1
Query:   55 HRRARKERVDSVSDTILEARRLHLRRIRDFEVDPETVEQLRKLGLGRRKQPLDNRAFTKKWLNNKQVA---TGMGAGGFAVHLGSASKDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDL 777
            H R  +ER DSV++ IL  R+ H++R+     +   V  L   GLG R++   ++ ++   ++   V    T  GAGGFA+HL S S+DWP+FKH LPE+A AGH+N GKSTLVNA+ G+ P +G A VSERAGWTD + FYQ+GKKPPV+TL DLPGYGHAVA+   +R W  M +DYL   R  L RCC+LVD+TRGL + D++L+  L +  I   +VLTKGDLL    LAQ + AV  DL
Sbjct:   53 HGRGNRERRDSVTNEILWERQQHMKRLGRLPANQALVRALEDEGLGSRRRK--HQVYSHITVHEPGVIKKKTNSGAGGFALHLTSTSRDWPIFKHLLPEIAFAGHSNSGKSTLVNAMIGVLPSKGPAKVSERAGWTDQICFYQLGKKPPVMTLADLPGYGHAVASAGQRRAWGEMIRDYLQN-RTILSRCCILVDSTRGLCKGDKMLVRFLTKYDIPWMVVLTKGDLLDCTSLAQCVLAVQLDL 293          
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: A0A8J6CDF0_DIALT (EngB-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDF0_DIALT)

HSP 1 Score: 145 bits (366), Expect = 2.780e-37
Identity = 92/192 (47.92%), Postives = 116/192 (60.42%), Query Frame = 1
Query:  310 DWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQI-----GKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKPPILPVCGHTGAGVTALWENM 870
            DWP     LPEVAL G +N GKS+L+NA  G    +GLA VS RAGWT  +SF+++     G+  P   LVD+PGYG AVA+ S +R WRR  + YLS  R  L    +LVDA RGL  EDR LLA L R G  H LVLT+ DLL P QLA+    V+ +L ++ +   A  P++ V   TG GV  LWE +
Sbjct:  128 DWPD-GGGLPEVALVGQSNSGKSSLLNAFLGSISGEGLAPVSARAGWTAHLSFFRLSAELAGEFAPRFVLVDMPGYGDAVADTSTRRTWRRAIRAYLS-HRPALLSVLLLVDAERGLETEDRELLARLVRAGTPHALVLTRCDLLSPLQLARCHYRVSDELGELNSAAAADVPMISVL--TGVGVRELWERL 315          
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: A0A8J5X8C3_DIALT (EngB-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8C3_DIALT)

HSP 1 Score: 141 bits (355), Expect = 1.450e-35
Identity = 103/278 (37.05%), Postives = 140/278 (50.36%), Query Frame = 1
Query:   67 RKERVDSVSDTILEARRLHLRRIRDFEVDPETVEQLRKLGLGRRKQPLDNRAFTKKWLNNKQVATGMGAGGFAVHLGSASKDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMD-----IGAKLLAKPPILPVCGHTGAGVTALWENMRTRSL 885
            R ER DSV DT+L  R  H  R+ + + D   + Q+  L LGR     + +A   K    + V+     G       S      +    LPEVALAG++N GKS+L+NAL G+  ++G A V  RAGWT+ V  ++   +   L LVD PGYG AV ++  +  W R    Y+    +  C   +LVD TRGL E D  L+    RRG+  Q+VLTK DLL    LA+S A VT DL +     IGA+    P +  V  +   GV  LW   R  +L
Sbjct:   27 RNERTDSVDDTVLRERARHAERMEEVDPDTRVLGQISALKLGRPPGWCNQKAVVAKQRARQAVSVVRALGR------SLDNAATLNVLGLPEVALAGYSNSGKSSLLNALTGLPAQRGPASVDSRAGWTESVFAFEAVVRGVSLALVDTPGYGVAVQSQWTRARWERALHAYVQNSEQLRC-VLLLVDCTRGLCEHDWRLMRTARRRGVVCQIVLTKADLLTAPLLARSHAVVTADLHERHGGEIGARA---PAVAMVSANFVQGVRQLWSLARHHAL 294          
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: R1EQK4_EMIHU (GTP-binding protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EQK4_EMIHU)

HSP 1 Score: 130 bits (328), Expect = 2.630e-31
Identity = 110/303 (36.30%), Postives = 151/303 (49.83%), Query Frame = 1
Query:   31 DLDDLTARHRRARKERVDSVSDTILEARRLHLRRIRDFE-VDPETVEQLRKLGLGRRKQPLDNRAFT--KKWLNNKQVATGMGAGGFAVHLGSASKDWPMFKHN-LPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPV----------LTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKP---------PILPVCGHTGAGVTALWENM 870
            +L++L  R +R R ER DS+S+ + E R +H  RI + E  DP  + ++  L LGRRK   D +  +  K  +  +        G      G A +D      N  PEVAL GH+NCGKS L+NAL G   R+G A V  RAGWT  + FY    +  +          L LVD PGYGHAVA     R WR + + Y+S     L    +LVD +RGL   D  +L  L +R +    VLTK DLL P +LA+S A V+  + D   +  A P         P+L +  H  +G+  LWE +
Sbjct:   27 ELEELKRRAKR-RSERADSLSEQMREERVMHALRIANCEGPDPAVLREIETLKLGRRKHWHDQKRASQLKARVARRHAFEAQEVGKTG---GLALEDLDKGNRNGRPEVALLGHSNCGKSALLNALIGAKARRGPAEVDSRAGWTMRLHFYWARPRGLLDEAHAGSQQGLVLVDTPGYGHAVAGAKELRHWRDLIEAYVSSSP-SLRLALLLVDCSRGLCAADGRVLRLLRKRRVPTFAVLTKCDLLPPAELARSHAIVSAQV-DEALRNGAAPSRADAAPAVPLLMLSSHFYSGIDGLWERL 323          
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: A0A2W6VFB7_SPHSX (Probable GTP-binding protein EngB n=1 Tax=Sphingomonas sp. TaxID=28214 RepID=A0A2W6VFB7_SPHSX)

HSP 1 Score: 123 bits (308), Expect = 4.590e-30
Identity = 77/176 (43.75%), Postives = 105/176 (59.66%), Query Frame = 1
Query:  331 NLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKPPILPVCGHTGAGVTAL 858
            +LPEVA AG +N GKS+L+NAL G   RQGLA  S   G T  ++ + +G+ PPVL LVD+PGYG+A A + + REW R+  DYL G R  L R  VLVD+  GL   D+ ++  L++  + +Q+VLTK D + P  LA   AAV +      A   A P ++P    T AG+  L
Sbjct:   37 DLPEVAFAGRSNVGKSSLLNALTG---RQGLARTSNTPGRTQELNLFLVGE-PPVLRLVDMPGYGYAEAPKDLIREWGRLVNDYLRG-RPTLKRVLVLVDSRHGLKPVDKEIMELLDKAAVSYQIVLTKADKIKPTALAAVSAAVAEIARTHPA---AHPQLIPTSSETKAGIAEL 204          
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: A0A1I6K7M6_9SPHN (Probable GTP-binding protein EngB n=1 Tax=Sphingomonas jatrophae TaxID=1166337 RepID=A0A1I6K7M6_9SPHN)

HSP 1 Score: 122 bits (305), Expect = 1.400e-29
Identity = 74/175 (42.29%), Postives = 101/175 (57.71%), Query Frame = 1
Query:  334 LPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKPPILPVCGHTGAGVTAL 858
            LPEVA AG +N GKS+L+NAL G   R GLA  S   G T  ++F+ +G+ P V  LVD+PGYG A A + M R W+ +  DYL G R  L RC VLVDA  GL + DR L+  L++  + ++LV+TK D + P +LA+   A   +       + A P +L     TG G+  L
Sbjct:   42 LPEVAFAGRSNVGKSSLLNALTG---RNGLARTSNTPGRTQELNFFAVGE-PAVFRLVDMPGYGFAKAPKDMVRRWKHLVNDYLRG-RVVLKRCLVLVDARHGLKDVDRELMTMLDKAAVSYRLVMTKADKVKPTELARVQEATAAEARK---HVAAHPEVLATSSETGEGIAEL 208          
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Match: A0A154VYJ0_9PROT (Probable GTP-binding protein EngB n=2 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154VYJ0_9PROT)

HSP 1 Score: 121 bits (303), Expect = 2.740e-29
Identity = 75/185 (40.54%), Postives = 111/185 (60.00%), Query Frame = 1
Query:  331 NLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGWTDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQSMAAVTQDLMDIGAKLLAKPPILPVCGHTGAGVTALWENMRTRSL 885
            +LPE+A AG +N GKS+LVNAL G   R+ LA  S   G T  ++F+++G++   L LVDLPG+G+A  ++S  + W  + KDYL G R  L R C+LVDA  GL + DR L+A +++  + +Q+VLTK D   P +LA  +  ++ +L     +  A P I P     GAG+ AL   + T +L
Sbjct:   42 SLPEIAFAGRSNVGKSSLVNALTG---RKTLARTSNTPGRTQQLNFFKLGER---LLLVDLPGHGYAKVSKSQSKNWTFLVKDYLRG-RVALRRVCLLVDARHGLKDNDRELMALMDKAAVVYQVVLTKTDKTKPAELAAMIETLSAEL---SKRTAAYPVIFPTSALEGAGIEALRAELATLAL 216          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164295 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEK3_9STRA4.220e-233100.00P-loop containing nucleoside triphosphate hydrolas... [more]
D7FIT5_ECTSI2.920e-9454.36YihA3, YihA/EngB-like GTPase n=1 Tax=Ectocarpus si... [more]
A0A4D9CU55_9STRA2.900e-6350.62EngB-type G domain-containing protein n=2 Tax=Mono... [more]
A0A7S3M560_9STRA4.580e-6350.41Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A8J6CDF0_DIALT2.780e-3747.92EngB-type G domain-containing protein n=1 Tax=Diac... [more]
A0A8J5X8C3_DIALT1.450e-3537.05EngB-type G domain-containing protein n=1 Tax=Diac... [more]
R1EQK4_EMIHU2.630e-3136.30GTP-binding protein n=2 Tax=Emiliania huxleyi TaxI... [more]
A0A2W6VFB7_SPHSX4.590e-3043.75Probable GTP-binding protein EngB n=1 Tax=Sphingom... [more]
A0A1I6K7M6_9SPHN1.400e-2942.29Probable GTP-binding protein EngB n=1 Tax=Sphingom... [more]
A0A154VYJ0_9PROT2.740e-2940.54Probable GTP-binding protein EngB n=2 Tax=Oceaniba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_30contigContig_30:766292..769030 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164295|e_gw1.30.178.1
DescriptionGTP binding
COG categoryV
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0218@1|root,KOG2486@2759|Eukaryota
Evalue4.79e-95
Seed ortholog2880.D7FIT5
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionYihA3, YihA/EngB-like GTPase
Ec32 orthologEc-20_002980.1
TranscriptId164617
TrackFilteredModels1
ProteinId164295
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164295gene_5410Tribonema minus UTEX_B_3156 geneContig_30 766292..769030 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164295Trimin1|164295|e_gw1.30.178.1Tribonema minus UTEX_B_3156 polypeptideContig_30 766292..769030 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5410_5exon_5410_5Tribonema minus UTEX_B_3156 exonContig_30 766292..766443 -
exon_5410_4exon_5410_4Tribonema minus UTEX_B_3156 exonContig_30 767068..767203 -
exon_5410_3exon_5410_3Tribonema minus UTEX_B_3156 exonContig_30 767525..767615 -
exon_5410_2exon_5410_2Tribonema minus UTEX_B_3156 exonContig_30 767979..768172 -
exon_5410_1exon_5410_1Tribonema minus UTEX_B_3156 exonContig_30 768614..769030 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5410CDS_5410Tribonema minus UTEX_B_3156 CDSContig_30 768614..769030 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5410 ID=mRNA_5410|Name=jgi.p|Trimin1|164295|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=990bp|location=Sequence derived from alignment at Contig_30:766292..769030- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCTAACAATGAAGATCATGTCGAATATGACGATCTGGACGACCTCACCGC
GAGGCACAGACGTGCACGGAAAGAGCGCGTGGACAGCGTCAGTGACACCA
TATTGGAGGCCCGCCGGTTGCATCTGCGGAGAATAAGAGATTTTGAGGTG
GACCCAGAGACCGTAGAGCAGCTGCGAAAGCTCGGACTTGGCAGGCGCAA
GCAGCCTTTGGACAACAGGGCATTCACCAAGAAGTGGCTCAACAACAAGC
AAGTGGCCACAGGCATGGGCGCTGGCGGCTTTGCTGTGCACCTGGGCTCA
GCTTCGAAGGACTGGCCCATGTTCAAGCACAACTTGCCGGAAGTTGCGCT
GGCGGGGCATACCAACTGCGGCAAGAGTACCCTGGTGAACGCACTGGCCG
GCATACACCCTCGGCAGGGCCTTGCCGGCGTCAGCGAGCGAGCTGGCTGG
ACGGACTTTGTGAGCTTCTACCAGATTGGTAAAAAACCGCCGGTGCTGAC
GCTGGTTGACCTGCCGGGCTATGGACACGCCGTAGCCAACCGCAGCATGC
AGCGCGAGTGGCGCCGAATGACAAAAGACTACCTCAGCGGACAGCGCAGG
CAGCTGTGCAGGTGCTGCGTGTTGGTGGACGCGACACGTGGACTTGCAGA
AGAGGACCGGATACTGCTTGCTCACCTCGAACGACGTGGCATTGAGCATC
AGTTGGTGCTGACAAAGGGAGACCTTCTGCTTCCGGAGCAGCTGGCACAG
AGCATGGCTGCCGTGACGCAGGACTTGATGGACATAGGTGCAAAGCTGTT
GGCAAAGCCACCAATACTGCCCGTGTGCGGCCATACAGGTGCTGGTGTGA
CTGCGCTATGGGAGAACATGAGGACACGCAGCTTAAGGGAACCAGGGTCC
CTCGTTTCCAGCATAGAGGCTGCCAGGAGAGTGCGAGAGGCCAAACTGGA
GAAGGACAGACTCAAACTTCAGCACACCAGAACACGGTAG
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protein sequence of jgi.p|Trimin1|164295

>Trimin1|164295|e_gw1.30.178.1 ID=Trimin1|164295|e_gw1.30.178.1|Name=jgi.p|Trimin1|164295|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp
ANNEDHVEYDDLDDLTARHRRARKERVDSVSDTILEARRLHLRRIRDFEV
DPETVEQLRKLGLGRRKQPLDNRAFTKKWLNNKQVATGMGAGGFAVHLGS
ASKDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQGLAGVSERAGW
TDFVSFYQIGKKPPVLTLVDLPGYGHAVANRSMQREWRRMTKDYLSGQRR
QLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQLVLTKGDLLLPEQLAQ
SMAAVTQDLMDIGAKLLAKPPILPVCGHTGAGVTALWENMRTRSLREPGS
LVSSIEAARRVREAKLEKDRLKLQHTRTR*
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mRNA from alignment at Contig_30:766292..769030-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5410 ID=mRNA_5410|Name=jgi.p|Trimin1|164295|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2739bp|location=Sequence derived from alignment at Contig_30:766292..769030- (Tribonema minus UTEX_B_3156 )
GCTAACAATGAAGATCATGTCGAATATGACGATCTGGACGACCTCACCGC GAGGCACAGACGTGCACGGAAAGAGCGCGTGGACAGCGTCAGTGACACCA TATTGGAGGCCCGCCGGTTGCATCTGCGGAGAATAAGAGATTTTGAGGTG GACCCAGAGACCGTAGAGCAGCTGCGAAAGCTCGGACTTGGCAGGCGCAA GCAGCCTTTGGACAACAGGGCATTCACCAAGAAGTGGCTCAACAACAAGC AAGTGGCCACAGGCATGGGCGCTGGCGGCTTTGCTGTGCACCTGGGCTCA GCTTCGAAGGACTGGCCCATGTTCAAGCACAACTTGCCGGAAGTTGCGCT GGCGGGGCATACCAACTGCGGCAAGAGTACCCTGGTGAACGCACTGGCCG GCATACACCCTCGGCAGGTCAGCGTTTCAGCTATGCCACAAAACGTGGAA CAACTGTTGCTTGTTGATGCTGCTGTCGTGTCAAGCATGTTAGACGAGGC ATCTGATGTTTTGCAGCATATGGGCCGCAGCTTGTGACCAGCCCAGCGCA AATTTGCTCTGCATTCTTCCCGCTATACTGCACAAAGGAAGCAGACTGCT GTGCGTGTGTAAACGCCTTTTGTGCTATTGGCAGCCATTTGGTTGTTGCA AGTCACTAGCTCATCGATGTCACCATTTGCATCTCATTGAGGGTATGGCA ATCTGCTTTGCAGGTACGCCAGCCATTGAACCTGCCTAGGCGGCAGCCCG TATGCATTGACACCAACGCCATGTGGTATGGCTGATTGCTCAGTGCGTAG TGGCAACTGTGTTCATTGCGTTTATATTCACAACTTGTCTGTTGATCCTG CATGATAGGGCCTTGCCGGCGTCAGCGAGCGAGCTGGCTGGACGGACTTT GTGAGCTTCTACCAGATTGGTAAAAAACCGCCGGTGCTGACGCTGGTTGA CCTGCCGGGCTATGGACACGCCGTAGCCAACCGCAGCATGCAGCGCGAGT GGCGCCGAATGACAAAAGACTACCTCAGCGGACAGCGCAGGCAGCTGTGC AGGTGCGCACCTGCTTTGCTCTTGAAGGATGCCTTGTGCCTGGCGTGGAC AAATGCTCCAAGTGTGCTGCTCTGGGCATCACCATCTTGTTGTGGTTCAC AGGTGGTTTCGCTTGTGCTCAAGGCATGTGCAGCACCGCGCTTCAAAGCA GTGCACTGCTGTCGAACCTGCCCTGCACATCATACGTCATTGACACCTGG CTGCACCGCACGTTCCGACAGAGCCCTACCTCATCAGGTCATACCTGTGC CATCCAGAACCATCCTTGTGCATGACTGGGCTGCTTGCAATAATCACGGA CGCGCTGCATCAGCCAGTGGCGCGCTCTACTAAACCAGCACGGCGCGTGT TGCTGCTGAATGCAGGTGCTGCGTGTTGGTGGACGCGACACGTGGACTTG CAGAAGAGGACCGGATACTGCTTGCTCACCTCGAACGACGTGGCATTGAG CATCAGGTACGCCGCGCAAGCGTGCAGATGCTGCGGCAGTGTGGGAAAGC AAGATCCGTCACTTTGTCAATGAGGCACCTGCTCGTTGCTGCTCAATGAA TCACAATGCTGTCATGGCTGGAGGGGGGGGCGGCGTGCAGCAGTGCTCAC AGAACATCGTTTGAACACGGAACACTTTTTGGTCCCAGTGAGGTTTGATC ACATTTCAGGAGTGCATCCGGGGTGAACGGACACGTGCACTGGTATATAG TCATCTGTGTCACCAGCAAAGTTTTGTCGGCTGCATTTGCAACCAAACTC CGTCATATCTGCATTGTCCCTGTGCAGTTGGTGCTGACAAAGGGAGACCT TCTGCTTCCGGAGCAGCTGGCACAGAGCATGGCTGCCGTGACGCAGGACT TGATGGACATAGGTGCAAAGCTGTTGGCAAAGCCACCAATACTGCCCGTG TGCGGCCATACAGGTTGGTGGTTGAGCGCTGCTGCTGTCATGGCTTGCAA TCTGCGTAGCATAGATCGACAAGCTATGCATGCTGTCAGAAAGTCACAAC ACGATGAGCGTTGCACAACACACTGAAACATCAACCGAGTTGACTGCATC CCTGCAGGACTGATGAAGCTTGCACTTGCCGTACGGTAAGCATTGAGTCA CAAGCGTCAAGCATTGAGTCGCAAGCGTCAGTAGTCCACGGCTTCTTCTT CGGGTTACTTGTCCTGTACCCAAAGGATGTCTGCTCTATGTCAGCCCTGT AGACAGTGGCGCGCTTCGGAAAATGGCGCACTGTGGACTGATCTCGAGCA ACTGTATGTCATCCTTTAACAGGACCTTTTGATGAGAAAGGCCTTTGTAG CGGCCACACTGTACCTGGCAGACTGGACGCAATGGTAACACCCTTGTAGA CACACCATGTGAGGCAGTTGTGGTGTGCATGCTTTGATCCATCGATGCGC TGAAACACTCGTGTGTCAGATGCGAACTGATGAGAGTGTCAGGTGATTGC GCCGCGTGCAAGGCATTGTTTTCGTGTAACCTCTAAACCTCCCCACATAT GCCATGCTTTTGCCGTGTCCACGTTACCACCTTGCAGGTGCTGGTGTGAC TGCGCTATGGGAGAACATGAGGACACGCAGCTTAAGGGAACCAGGGTCCC TCGTTTCCAGCATAGAGGCTGCCAGGAGAGTGCGAGAGGCCAAACTGGAG AAGGACAGACTCAAACTTCAGCACACCAGAACACGGTAG
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Coding sequence (CDS) from alignment at Contig_30:766292..769030-

>mRNA_5410 ID=mRNA_5410|Name=jgi.p|Trimin1|164295|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=990bp|location=Sequence derived from alignment at Contig_30:766292..769030- (Tribonema minus UTEX_B_3156 )
GCTAACAATGAAGATCATGTCGAATATGACGATCTGGACGACCTCACCGC
GAGGCACAGACGTGCACGGAAAGAGCGCGTGGACAGCGTCAGTGACACCA
TATTGGAGGCCCGCCGGTTGCATCTGCGGAGAATAAGAGATTTTGAGGTG
GACCCAGAGACCGTAGAGCAGCTGCGAAAGCTCGGACTTGGCAGGCGCAA
GCAGCCTTTGGACAACAGGGCATTCACCAAGAAGTGGCTCAACAACAAGC
AAGTGGCCACAGGCATGGGCGCTGGCGGCTTTGCTGTGCACCTGGGCTCA
GCTTCGAAGGACTGGCCCATGTTCAAGCACAACTTGCCGGAAGTTGCGCT
GGCGGGGCATACCAACTGCGGCAAGAGTACCCTGGTGAACGCACTGGCCG
GCATACACCCTCGGCAGGGCCTTGCCGGCGTCAGCGAGCGAGCTGGCTGG
ACGGACTTTGTGAGCTTCTACCAGATTGGTAAAAAACCGCCGGTGCTGAC
GCTGGTTGACCTGCCGGGCTATGGACACGCCGTAGCCAACCGCAGCATGC
AGCGCGAGTGGCGCCGAATGACAAAAGACTACCTCAGCGGACAGCGCAGG
CAGCTGTGCAGGTGCTGCGTGTTGGTGGACGCGACACGTGGACTTGCAGA
AGAGGACCGGATACTGCTTGCTCACCTCGAACGACGTGGCATTGAGCATC
AGTTGGTGCTGACAAAGGGAGACCTTCTGCTTCCGGAGCAGCTGGCACAG
AGCATGGCTGCCGTGACGCAGGACTTGATGGACATAGGTGCAAAGCTGTT
GGCAAAGCCACCAATACTGCCCGTGTGCGGCCATACAGGTGCTGGTGTGA
CTGCGCTATGGGAGAACATGAGGACACGCAGCTTAAGGGAACCAGGGTCC
CTCGTTTCCAGCATAGAGGCTGCCAGGAGAGTGCGAGAGGCCAAACTGGA
GAAGGACAGACTCAAACTTCAGCACACCAGAACACGGTAG
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