mRNA_5288 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A835Z586_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z586_9STRA) HSP 1 Score: 410 bits (1055), Expect = 7.890e-145 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1 Query: 1 MVDPLNEIVIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVIIAEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQIGCCLGE 633 MVDPLNEIVIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVIIAEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQIGCCLGE Sbjct: 1 MVDPLNEIVIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVIIAEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQIGCCLGE 211
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A836C8A8_9STRA (Sugar efflux transporter for intercellular exchange-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A8_9STRA) HSP 1 Score: 223 bits (569), Expect = 1.210e-69 Identity = 110/209 (52.63%), Postives = 155/209 (74.16%), Query Frame = 1 Query: 7 DPLNEIVIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVII--AEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQIGCCL 627 D +N +V+PL+GL TA ILF SP+RE+ +VDK++ +G LNVFP+A I NCFAW YA+ SNLW++ +N PS MIGL+YM++ + DL AA M++++ G+ LGL+++I E + + +N++G ICI++L++FY APLSTL VL+ +DSSAF LPLA+TTA+NGA W+AFG Y DAF+YGPN +GAVNG +Q+ CCL Sbjct: 6 DVVNNVVVPLIGLCTAHILFLSPMRELLKVDKSQALGDLNVFPLAMISVNCFAWTGYAIVKSNLWIFLTNFPSVMIGLFYMTIMTKCADLGAARLNMIRIITCAGLAFDGLGLLLMIALTGEQQQAARENIMGTICIIVLVIFYVAPLSTLAQVLKTKDSSAFFLPLALTTAINGAIWTAFGVYNHDAFVYGPNALGAVNGTVQVICCL 214
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A139ALS5_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139ALS5_GONPJ) HSP 1 Score: 147 bits (370), Expect = 2.610e-40 Identity = 76/204 (37.25%), Postives = 127/204 (62.25%), Query Frame = 1 Query: 13 LNEIVIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLG--LMMVIIAEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQIG 618 L E + PL+G++TAT++F +PL ++R++ T + N P+ I N +W++Y+L N +++WSN+ F +GL+Y+ L A D+ A+ +V V G L+ +G + +++ D+ A+++ G IC+ LL FY +PLSTL VL RD+S+F PL++ LNGA W+ +G +GD F++ PN +GAV G +Q+G Sbjct: 10 LTETLAPLLGVVTATLIFLAPLSDVRQIALTGELADFNPIPLGFIVTNALSWILYSLLVRNFYIFWSNVSGFCLGLYYIVSALGARDVPASARSLVTTVFTAGPFLILIGFHVAFLVVNPDDPDKARSLGGWICVAALLAFYTSPLSTLHHVLLTRDASSFSYPLSLACVLNGALWTVYGLVIGDGFVWAPNAVGAVVGVVQVG 213
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A7J7Q468_9CHLO (Bidirectional sugar transporter SWEET n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q468_9CHLO) HSP 1 Score: 119 bits (297), Expect = 1.630e-29 Identity = 69/201 (34.33%), Postives = 116/201 (57.71%), Query Frame = 1 Query: 25 VIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVIIAEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQIGCCL 627 V P +G + A LF SP + + +V ++ +G LN PM + NC AW+VY+ T ++++ SN+P ++G +M+++ M+Q V+ ++ + G++ V + + + A ++ G + +LL+FY APLS L VLR R S++ LP A +NG W+ +G LGD F+YGPN++GAV G +Q+ CL Sbjct: 10 VAPGLGCLVACALFSSPFKAVLQVRTSKALGSLNPLPMVAMWANCVAWLVYSFLTVDIYVLISNVPGLLLGS-FMTISCYGYADEKTRNIMLQGVMFFATVMTAAGIV-VSFGKFDHAGAVSIWGCTTVFILLIFYSAPLSALAEVLRTRSSASLYLPFAAMNVVNGLLWTTYGLALGDLFIYGPNMVGAVFGSVQVVLCL 208
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A1S8VJY0_9FUNG (Uncharacterized protein n=3 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VJY0_9FUNG) HSP 1 Score: 118 bits (296), Expect = 2.580e-29 Identity = 63/190 (33.16%), Postives = 115/190 (60.53%), Query Frame = 1 Query: 28 IPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVIIAEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAV 597 IP +G +TA +F +P + +R++DKT + +N FP I NC W+VY L + ++++ N+ + +G++Y + R + + R++Q++V +L+ S G + I + A+ ++G +C+++L VFY APLS +V++ +D+S+ LA + +NG+ WS +G LGDAF++ PNL+G V Sbjct: 19 IPGIGCLTALWIFIAPFKSVRKIDKTDSLDNVNPFPFPMIMANCLGWLVYGLLVQDPYVFFPNIVGYQLGVYYTLTSYRVSGKDFQS-RVIQILVVSSVLVFS-GAFVSFIVLNGAYPARTIMGLVCVMILAVFYSAPLSGFYSVIKNKDASSIDPILAAASLVNGSLWSIYGLALGDAFIWSPNLLGVV 206
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A7R9TVN4_9VIRI (Bidirectional sugar transporter SWEET n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TVN4_9VIRI) HSP 1 Score: 117 bits (292), Expect = 1.570e-28 Identity = 70/195 (35.90%), Postives = 109/195 (55.90%), Query Frame = 1 Query: 31 PLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMV-QVVVGGGMLLVSLGLMMVIIAEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQ 612 P +G++T+ F SPL +R + +N P A I NC W YA T + +++WSN P ++GL+++S ++ T ++ R+ Q++V + LV G + IA + A +V+GA+ + LLVFY APLS +V +L+ RDSS+ L PL T+A+NG W +G L D F+ GPN G + Q Sbjct: 28 PGLGVVTSNATFVSPLAHVRRARASGDFSSINAAPFAAIVANCMGWCAYAFGTRDWFVFWSNAPGVLLGLFFVSSAMQHTKCSSLLARLERQLLVQTAVTLV--GGAVAAIALRDADRAMSVLGAVAVFHLLVFYSAPLSDVVNILKQRDSSSLLWPLIATSAVNGLLWVGYGLALSDFFIAGPNAFGVLLAVFQ 220
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A383VKD7_TETOB (Bidirectional sugar transporter SWEET n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VKD7_TETOB) HSP 1 Score: 116 bits (290), Expect = 1.780e-28 Identity = 69/201 (34.33%), Postives = 114/201 (56.72%), Query Frame = 1 Query: 25 VIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVIIAEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQIGCCL 627 V P +G I A LF SP + + +V ++ +G LN P+ + NC AW+VY+ T ++++ SN+P ++G +M+++ M+Q V+ ++ + G+++ D + G + +LLVFY APLS L VLR+R S++ LP A +NG W+ +G LGD+F+YGPN++GAV G LQ+ C+ Sbjct: 10 VAPGLGCIVAWALFSSPFKAVLQVRASKALGSLNPLPLVAMWANCVAWLVYSFLTVDVYVLASNIPGLLLGS-FMTISCYGYADEKTRNVMLQGVMFFASIMTAAGIVVSFGRYDHAGTVF-IWGCTTVFILLVFYSAPLSALAEVLRSRCSASLYLPFAAMNVVNGLLWTTYGLALGDSFIYGPNMVGAVFGSLQVVLCM 208
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A7S3VUD2_DUNTE (Bidirectional sugar transporter SWEET n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VUD2_DUNTE) HSP 1 Score: 113 bits (283), Expect = 2.380e-27 Identity = 61/196 (31.12%), Postives = 116/196 (59.18%), Query Frame = 1 Query: 28 IPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVIIAEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQI 615 +P +G+I T+++ SPL+ +R+V + +G+ N P+ I N W++YA + ++ +NLP ++G++ V D+ + +VV +L +LG + V + + +++ N +G + + +LL +Y APLS L AV++++ S++ PL+ +NGA W A+G +GDAF++GPN +GA+ G +Q+ Sbjct: 16 VPSLGIILGTMMYMSPLKAIRDVKRYNTLGEFNTLPLPMIVANTIVWLIYASFIKSPYVAGANLPGLVLGVYMTFVAYGVADMKTRDSMLRVIVVITSVL--ALGTIAVALFVKDPAMSANAIGYLAVGILLCYYSAPLSALAAVVQSQTSASLHAPLSFMCFMNGALWVAYGLAVGDAFIWGPNGVGALFGAIQL 209
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A507CIL3_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CIL3_9FUNG) HSP 1 Score: 110 bits (275), Expect = 5.130e-26 Identity = 67/205 (32.68%), Postives = 112/205 (54.63%), Query Frame = 1 Query: 7 DPLNEIVIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWLWWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVII---AEDELSVAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQ 612 D L + +IP G++T+ +F SP+ + V K++ +G LN P + GNC W +Y + ++ NL + + +Y+ L + M + +LL+S GL+ I + D AK ++G + ++L++FY APLSTL+ +++ +DSS+ +PLAVT+ +NG W +G L D F+ PNL G + GCLQ Sbjct: 15 DILLKQIIPAAGVLTSIAIFTSPMIHVLAVRKSQKLGALNPLPYPLMAGNCLGWALYGYIARDYYVMIPNLFGWSLSTFYLMSALPHMPRKRQDHMMGMYIGSQALLLLS-GLVAFITLGGSSDGSGTAKTLMGCVTTVILVLFYLAPLSTLMHIIQTKDSSSVSIPLAVTSLVNGLLWGLYGLALADYFVACPNLFGFLTGCLQ 218
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Match: A0A3P3YE39_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YE39_PLABS) HSP 1 Score: 106 bits (265), Expect = 1.010e-24 Identity = 68/214 (31.78%), Postives = 120/214 (56.07%), Query Frame = 1 Query: 7 DPLNEIVIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPGNCFAWMVYALPTSNLWL------WWSNLPSFMIGLWYMSVTLRATDLTAATYRMVQVVVGGGMLLVSLGLMMVIIA-EDELS--VAKNVVGAICILLLLVFYFAPLSTLVAVLRARDSSAFLLPLAVTTALNGAAWSAFGFYLGDAFLYGPNLIGAVNGCLQIGC 621 D + +V P +GL+TA +L+ SPLR++R + L V P+A + N FAW VY+ +++ + ++SNLP ++ ++Y + L DL+ +++V GM LGL+ +A D+ S +++G + I + + +PL +LV VL+ R++++F PLA T +NGA W+ FGFY+ + ++GPN +N +Q+ C Sbjct: 2 DAVVVVVAPSLGLVTANLLYLSPLRDVRARVAKGELADLAVIPLAMLAVNGFAWCVYSTVMTDVTILSAFLVFFSNLPGALLCMYYGTAVLPLPDLSRRQLLGMRLVFAVGMSATLLGLLASQVACRDKCSPETRSSILGYVVIAIYMATTVSPLLSLVRVLKTRNAASFSAPLAATMLVNGALWAVFGFYIDNIVIWGPNAFSVLNSVVQLVC 215 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164694 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5288 ID=mRNA_5288|Name=jgi.p|Trimin1|164694|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=636bp|location=Sequence derived from alignment at Contig_32:953129..954547- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGGATCCTTTGAATGAGATAGTGATTCCCCTGGTGGGGCTTATCACback to top protein sequence of jgi.p|Trimin1|164694 >Trimin1|164694|e_gw1.32.40.1 ID=Trimin1|164694|e_gw1.32.40.1|Name=jgi.p|Trimin1|164694|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=212bp MVDPLNEIVIPLVGLITATILFYSPLREMREVDKTRLVGKLNVFPMACIPback to top mRNA from alignment at Contig_32:953129..954547- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5288 ID=mRNA_5288|Name=jgi.p|Trimin1|164694|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1419bp|location=Sequence derived from alignment at Contig_32:953129..954547- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_32:953129..954547- >mRNA_5288 ID=mRNA_5288|Name=jgi.p|Trimin1|164694|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=636bp|location=Sequence derived from alignment at Contig_32:953129..954547- (Tribonema minus UTEX_B_3156 )back to top |