mRNA_5263 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348893
Unique NamemRNA_5263
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A836CE88_9STRA (Fatty acid desaturase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE88_9STRA)

HSP 1 Score: 1246 bits (3223), Expect = 0.000e+0
Identity = 697/697 (100.00%), Postives = 697/697 (100.00%), Query Frame = 2
Query:  191 MASAATAKEQKVAASPESSSNSVVPVLLCLTLVGAAAANVFMAKRIRYMMPPPKQARWQPADDLRAAQRAAAKRKYDMAWAEREEQERAAAAAQKAAQEAQLRREREYRALRDEMERIRRTATHRRQGLATSEARRRGSAPPHGIALLPPSVALALRALGFESLSGVTEASVKRAYLAKAQELHPDKHRHCVESEAARRRSEERFKEVAEAYQHLLEHYFNVNTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTAATLCSLAWLAWAVAVIGGCALLFHLPPWQYAAFVTAAFALSAAIPDPGTAPWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHHNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHALRARHPGRVWRFGPACDGVSAAXXXXXXXXXXXXXXXXAPVQKSKDA 2281
            MASAATAKEQKVAASPESSSNSVVPVLLCLTLVGAAAANVFMAKRIRYMMPPPKQARWQPADDLRAAQRAAAKRKYDMAWAEREEQERAAAAAQKAAQEAQLRREREYRALRDEMERIRRTATHRRQGLATSEARRRGSAPPHGIALLPPSVALALRALGFESLSGVTEASVKRAYLAKAQELHPDKHRHCVESEAARRRSEERFKEVAEAYQHLLEHYFNVNTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTAATLCSLAWLAWAVAVIGGCALLFHLPPWQYAAFVTAAFALSAAIPDPGTAPWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHHNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHALRARHPGRVWRFGPACDGVSAAXXXXXXXXXXXXXXXXAPVQKSKDA
Sbjct:    1 MASAATAKEQKVAASPESSSNSVVPVLLCLTLVGAAAANVFMAKRIRYMMPPPKQARWQPADDLRAAQRAAAKRKYDMAWAEREEQERAAAAAQKAAQEAQLRREREYRALRDEMERIRRTATHRRQGLATSEARRRGSAPPHGIALLPPSVALALRALGFESLSGVTEASVKRAYLAKAQELHPDKHRHCVESEAARRRSEERFKEVAEAYQHLLEHYFNVNTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTAATLCSLAWLAWAVAVIGGCALLFHLPPWQYAAFVTAAFALSAAIPDPGTAPWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHHNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHALRARHPGRVWRFGPACDGVSAAXXXXXXXXXXXXXXXXAPVQKSKDA 697          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A6H5KG61_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG61_9PHAE)

HSP 1 Score: 427 bits (1097), Expect = 2.600e-139
Identity = 212/404 (52.48%), Postives = 266/404 (65.84%), Query Frame = 2
Query:  977 ATLCSLAWLAWAVAVIGGCALLFHLPPWQYAAFVTAAFALSAAIPDPGTAPWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHHNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKD-APQLPCGYPGSILLAFVPPAWFRVMDPRIHALRAR-HPGRVWRFGP 2182
            A LC   W AW   +I G   L     W Y  FV + F  +A IPD G +P P + HL +P  A KG+H GG W     YWAF  LP  D +VGVDTFN   A Y  L ER+ FR+ + IF   ++ALL ++   V T  LT  E +G+ VSV VY GG GI ++HEL+H++ + E+ LGR +  ++ YGHF VEHN GHH+ VAT EDPATARFGESF++FLPRCVV SF SA  +E  RLR   LP++HNE+  Y V S+ +  L+ A+FG   + +F+GQSL+GI  FESVNY+EHYGLER+    GK E VG EHSWD+P RL+NM LFKLQRH DHH+ + +RYQ L A+   +PQLP GYPG ILLA  PP W  VMD R+  LR++ HPGR WR GP
Sbjct:   42 ARLCPRLWQAWVAGLIAGSMFLLEFDIWVYVGFVASLFLGTAVIPDSGDSPSPYFMHLAIPFFAVKGVHEGGGWTAISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPAQLALLAYACHAVNTIPLTPLEFLGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFASAWRLETDRLRDRNLPFYHNEMLWYWVASSCLCALLTAMFGPLTVPLFVGQSLIGIFFFESVNYVEHYGLERKRDEQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKNHPGRAWRHGP 445          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A7S3WDU4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WDU4_9SPIT)

HSP 1 Score: 311 bits (797), Expect = 3.440e-94
Identity = 163/361 (45.15%), Postives = 223/361 (61.77%), Query Frame = 2
Query: 1139 YAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVA----TRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHH--NEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPG-------KYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHALRARHPGRVWRFGP 2182
            Y H  +  +AA G++ GG W    + +  ++ P+LD  VG D+ +            ++FR+ + + P+ ++  L+WS   +A    + +LTVAE VG S+S G Y G  GI  AHEL HR++  ++ LG + + L+CY HFN+EHN GHH+ +AT EDPATAR GE+F+ FLPR ++   RSA  IE  RL  +GLP+ H  NE+ R    +  VA+L+  +FG  A   F GQ  + ++LFESVNYLEHYGLERR+ S         +YE V + H+WDSP RL N  + KLQRHADHH+ AGKRYQ L     +PQLP GY   I+LAFVPP WF VMDPR+   R R+P + +R  P
Sbjct:   59 YIHALVGGLAADGIYRGG-WRSMTLMYVILMFPMLDYFVGTDSRSPPPK---QELNSKSFRLASLMQPITQLVFLIWSCVIIAYGNDSGKLTVAEVVGASISFGTYTGAIGITYAHELCHRHSSLDKYLGIMNLILVCYPHFNIEHNKGHHKMIATEEDPATARAGETFYQFLPRVIMGELRSAADIERRRLLKKGLPFIHPCNELIRLFSATTCVALLIGTIFGAKACLFFCGQCAVALLLFESVNYLEHYGLERRQHSDDISLPVEWRYEPVALRHAWDSPTRLVNTFILKLQRHADHHVHAGKRYQQLTISDASPQLPGGYATMIVLAFVPPLWFAVMDPRLLEHRRRNPRQQYRHWP 415          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A3A4JVY7_9DELT (Alkane 1-monooxygenase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3A4JVY7_9DELT)

HSP 1 Score: 292 bits (747), Expect = 4.390e-88
Identity = 154/330 (46.67%), Postives = 212/330 (64.24%), Query Frame = 2
Query: 1154 LPIIAAKGLHAGGAWACSL-IYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWH--HNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRI 2134
            L ++A    +A G W   L ++ AFV++P+ D ++G +T N      ATL E R F++ T I   V+VAL+ W      T+ L+  E  G +VSVG+  G  GI ++HEL+HR   FE  LG+ ++  + Y H+++EH  GHHR VATP+DPATAR+GES ++FLPR +++SF SA TIE  RL+ +GL  +  HN + RY   +A +AV +  L+G AA+  FL QSL+ I L E VNY+EHYGL RR VS  ++E V   HSW++  RL+N  LF LQRH+DHH  A  RYQLL    ++PQLP GY G +LL  VPP WF VM+ R+
Sbjct:   43 LTVLATLAGYALGGWLTFLTVFIAFVVVPLFDFVLGANTLNPTPEEEATLDEARDFKLLTWIAAPVQVALMFWGAWVAGTKNLSWVETAGLTVSVGIVGGAMGINVSHELIHRYRPFETFLGKAMLWSVSYLHWSIEHVAGHHRRVATPQDPATARYGESVYAFLPRTIIDSFISAWTIERHRLKKKGLAEYGFHNRILRYLAATAALAVGLGLLWGAAAVAFFLVQSLVAITLLEIVNYIEHYGLLRRRVSDTEFEEVTPVHSWNASQRLTNYFLFNLQRHSDHHARAHIRYQLLRHLDESPQLPTGYAGMVLLTLVPPLWFAVMNKRV 372          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A1Y5T9Z1_9PROT (Alkane 1-monooxygenase 1 n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5T9Z1_9PROT)

HSP 1 Score: 281 bits (719), Expect = 1.960e-84
Identity = 145/327 (44.34%), Postives = 199/327 (60.86%), Query Frame = 2
Query: 1178 LHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLP-WH-HNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHALRAR 2152
            +  GG W    +   F ++P++D +VG    N   A  A +   R +R+    +  V+ ALL+WS   VA+  L   E +G ++++G+  G  GI  AHEL+HR  +F+R+L  +++  + Y HF +EH HGHHR VAT +DPATAR GESF+ FLPR +V   +SA  +E  R R  G+P W   N + RYG++  T  V+V A+FG A L  F+ Q+L+ +   E +NYLEHYGL RR    G+ E V   HSW+S   +SN+ L  L RH+DHH AAG+ YQLL    DAPQLP GY    L A VPP WFR+M+PR+ A RAR
Sbjct:   21 VQQGGWWMFFPVLQVFAIIPLIDEIVGPWQGNPDPATEARITRSRPYRLLVWAWVPVQTALLVWSLGLVASGALAPHEIIGLTLAIGISTGTVGITFAHELMHRPGRFDRMLAELLMGSVLYAHFCIEHVHGHHRNVATRDDPATARLGESFYRFLPRTIVRGAQSAWRLERERRRRRGIPFWSLRNRMLRYGLLQTTFLVVVLAVFGPAGLLFFVAQALVAVTELEIINYLEHYGLARRIGGDGRPERVRPWHSWNSSHLVSNLFLINLARHSDHHFAAGRPYQLLRHWPDAPQLPGGYGAMFLAAMVPPLWFRIMNPRVAAWRAR 347          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: R1FN77_EMIHU (FA_desaturase domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FN77_EMIHU)

HSP 1 Score: 283 bits (724), Expect = 4.090e-84
Identity = 157/363 (43.25%), Postives = 211/363 (58.13%), Query Frame = 2
Query: 1145 HLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVA--------TRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHH--NEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPG-------KYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHALRARHPGRVWRFGP 2182
            H     +A +G++ GG W  + + +  +LLP+ + +VG D  +            ++FR  +   P++++  L WS   VA         ++L+  E V   +S GVY+G FGI  AHEL HR+ K +RLLG + +  + Y HFN+EHN GHH+ VAT EDPATAR GESF+ FLPR V+   RSAV +E  RL   G+P+ H  NE+ +   +S  +A  V    G  AL  FL Q+   ++LFESVNYLEHYGLERR+ +         +Y  +G+ H+WDSP RL N  L KLQRHADHH  AGKRYQ L     +PQLP GY   I +A VPP WF VMDPR+   R   P + +R  P
Sbjct:   15 HAVTGALATEGIYRGG-WRAATVAYVIILLPIAEHIVGTDRRSPPPK---DELNSKSFRFASLAQPVLQLLWLAWSLLIVAFGNDGYDGVKKLSTMEVVLGGISFGVYSGAFGITYAHELCHRHAKLDRLLGILNLVCVFYPHFNIEHNKGHHKMVATEEDPATARAGESFYHFLPRVVIGELRSAVELEGKRLAKAGVPFLHPTNELLQLFSLSIAMAAGVGLGLGGQALAFFLIQAGTAVLLFESVNYLEHYGLERRQYTSDPSLPVEWRYAKIGLRHAWDSPTRLGNTILLKLQRHADHHNHAGKRYQQLTTSDASPQLPGGYATMIAIALVPPLWFAVMDPRLLEHRRSMPRQHYRHWP 373          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: R1B9Q8_EMIHU (Alkane-1-monooxygenase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B9Q8_EMIHU)

HSP 1 Score: 285 bits (728), Expect = 3.890e-83
Identity = 159/376 (42.29%), Postives = 215/376 (57.18%), Query Frame = 2
Query: 1106 IPDPGTAPWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVA--------TRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHH--NEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPG-------KYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHALRARHPGRVWRFGP 2182
            +PD        + H     +A +G++ GG W  + + +  +LLP+ + +VG D  +            ++FR  +   P++++  L WS   VA         ++L+  E V   +S GVY+G FGI  AHEL HR+ K +RLLG + +  + Y HFN+EHN GHH+ VAT EDPATAR GESF+ FLPR V+   RSAV +E  RL   G+P+ H  NE+ +   +S  +A  V    G  AL  FL Q+   ++LFESVNYLEHYGLERR+ +         +Y  +G+ H+WDSP RL N  L KLQRHADHH  AGKRYQ L     +PQLP GY   I +A VPP WF VMDPR+   R   P + +R  P
Sbjct:  133 VPDDHNTAVQYWFHAVTGALATEGIYRGG-WRAATVAYVIILLPIAEHIVGTDRRSPPPK---DELNSKSFRFASLAQPVLQLLWLAWSLLIVAFGNDGYDGVKKLSTMEVVLGGISFGVYSGAFGITYAHELCHRHAKLDRLLGILNLVCVFYPHFNIEHNKGHHKMVATEEDPATARAGESFYHFLPRVVIGELRSAVELEGKRLAKAGVPFLHPTNELLQLFSLSIAMAAGVGLCLGGQALAFFLIQAGTAVLLFESVNYLEHYGLERRQYTSDPSLPVEWRYAKIGLRHAWDSPTRLGNTILLKLQRHADHHNHAGKRYQQLTTSDASPQLPGGYATMIAIALVPPLWFAVMDPRLLEHRRSMPRQHYRHWP 504          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A0M9DTN4_9BACT (Alkane 1-monooxygenase n=1 Tax=bacterium 336/3 TaxID=1664068 RepID=A0A0M9DTN4_9BACT)

HSP 1 Score: 276 bits (706), Expect = 1.840e-82
Identity = 140/339 (41.30%), Postives = 214/339 (63.13%), Query Frame = 2
Query: 1154 LPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLP-WHH-NEVYR--------YGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHA 2140
            LP +   G + GG W  + + +AFVL+P+LDA VGVDT N  +    +L++ + +++ T  +  ++V L++W+   V+ + L   E VG+ +S     GG GI +AHEL H+NT+ E+ L ++I+A +CY HF +EHN GHH  VATP DPAT+R  ++F++F  + VV S RSA  +E  RL+ + L  WH  NE++          GV++  ++ L      +  ++ FL QS++G  L E+VNY+EHYG++R+ +  GKY+ V   HSW++   +SN  LF+LQRH+DHH  A +RYQ+L   +++PQLP GYP  IL A VPP WF +M+ R+ A
Sbjct:   15 LPTLWLTGYYGGGIWNYATLIFAFVLIPILDAGVGVDTQNPEKEEEKSLSDEKFYKIVTFSWAFLQVGLVIWACYVVSLQTLQTYELVGFVLSTMTVTGGVGITVAHELGHKNTRIEQFLAKVILATVCYRHFYIEHNRGHHVNVATPLDPATSRKNQTFYAFWWQTVVGSIRSAWDLEKRRLQKQNLSVWHFSNEMWACIFQPILFIGVITLLISYLQGYFVWQVPVF-FLVQSILGFSLLEAVNYIEHYGIKRKLLPSGKYQRVEHLHSWNASHLISNFFLFQLQRHSDHHAFANRRYQVLRHFEESPQLPAGYPTMILTALVPPLWFAIMNKRLEA 352          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A0W0S8S6_9GAMM (Alkane monooxygenase n=1 Tax=Legionella cherrii TaxID=28084 RepID=A0A0W0S8S6_9GAMM)

HSP 1 Score: 275 bits (703), Expect = 3.370e-82
Identity = 142/341 (41.64%), Postives = 207/341 (60.70%), Query Frame = 2
Query: 1139 YAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHHNEVYRYGVVSATVAVLVAALF--GRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHALRARH 2155
            Y  + LP I   G + G  ++    +  F L+P++D    VD+ N        L + R F++ T I+  V+ + L+ +   V    LTV E +G+S+S+G+  GG GI +AHEL+H+N+  ++LL +I++  +CYGHF +EH  GHH  VATP DPATAR GES + FLPR ++ SFRSA+ +E  RL   G  W+H     Y ++     + +A L+  G   L  F+ QSL  I+L E +NY+EHYGLER++++ G YE V  +HSW++   LSNM LF LQRH+DHH+   + YQLL     +PQLP GY G ++LA  PP W  VMD R+   R+++
Sbjct:   13 YLLVILPFI---GFYFGHFYSFLPFFVLFTLIPLMDVWF-VDSSNPDSTQEQRLLKDRYFKLITWIYVPVQYSFLILAIYLVVHYPLTVTEFIGFSLSIGLLTGGIGITLAHELMHKNSTIDQLLSKILLVSVCYGHFFIEHVRGHHVHVATPRDPATARLGESLYHFLPRTIIGSFRSALNLEGKRLNRLGYSWYHWNNQFYWIIGIPFLLAIALLYYGGWGGLLFFILQSLTAILLLEIINYIEHYGLERKKLANGSYEKVSAQHSWNASHWLSNMLLFHLQRHSDHHVHGARPYQLLRHIDSSPQLPSGYLGMLILALFPPLWRGVMDKRVLISRSKN 349          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A3A0DPJ2_9BACT (Alkane 1-monooxygenase n=3 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0DPJ2_9BACT)

HSP 1 Score: 276 bits (706), Expect = 4.190e-82
Identity = 140/338 (41.42%), Postives = 203/338 (60.06%), Query Frame = 2
Query: 1127 PWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLP-W-HHNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRI 2134
            PWP      +P+    G   GG +        F L+P+LD ++G D  N        L+E+  FRV T ++  ++++L++W    V    LT  E  G+++S+G+  GG G+ +AHEL H+   FE+ LG +++  + Y HF +EH  GHH  VATP DPATAR GES ++F  R V  S+  A  IE  RL+  G   W +HN +  +  +    A ++ +LFG  A++ F  QS +G  L E VNYLEHYGL+RRE++ G+YE V + H+W++  R++N  LFKLQRHADHH+   +RYQ L   +++PQLP GYPG +LLA  PP W R+M PR+
Sbjct:   38 PWPYSLAYVVPLSVILGHWLGGVFYYLTPMITFGLIPLLDLMIGSDRTNLDADALERLSEKFGFRVITFLYVPLQISLVIWGAHVVTHEALTGFELAGFALSIGITTGGVGVTVAHELFHKKNAFEKALGHVLLMTVSYMHFYIEHLIGHHVHVATPRDPATARRGESLYAFYVRTVSRSWLDAWRIEKQRLQHRGYSHWGYHNRMLWFVALPVMFAAMLGSLFGWQAVFYFFVQSAVGFTLLEIVNYLEHYGLQRRELASGRYEKVNLAHAWNADQRVTNYFLFKLQRHADHHVHPLRRYQTLRHFEESPQLPTGYPGMMLLALAPPLWRRIMHPRL 375          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A835YZP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZP9_9STRA)

HSP 1 Score: 717 bits (1852), Expect = 6.200e-260
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 1
Query:    1 MTLRMLWYRAACLLVLATLGNAVTCTNSSAVAVPGYKLALTSTSVYELGAIGDYAPPSTTFTEVVTDYAAVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLLEPAGTFELVLHKNGNFDINLSSMAYHFDVEGTNNSLVGWQSQVSSKCICGPSCTASSAESTKGTCDNLFSGTYNWAFSLSATLQYTYGPDCMSGGDLAGKSSSTVMIAAGGACGAGLVLSLLLMFXXXXXXXXXXXAREDAEAEVRRLARLAALDKKSDWDEVGDFRTLGDLTPLETPVSSGETPTGNEGKGRXXXXXXXXXXXXXXXXXDAEEGAAGERTSLTDVPLHMRSDSGGV 1203
            MTLRMLWYRAACLLVLATLGNAVTCTNSSAVAVPGYKLALTSTSVYELGAIGDYAPPSTTFTEVVTDYAAVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLLEPAGTFELVLHKNGNFDINLSSMAYHFDVEGTNNSLVGWQSQVSSKCICGPSCTASSAESTKGTCDNLFSGTYNWAFSLSATLQYTYGPDCMSGGDLAGKSSSTVMIAAGGACGAGLVLSLLLMFXXXXXXXXXXXAREDAEAEVRRLARLAALDKKSDWDEVGDFRTLGDLTPLETPVSSGETPTGNEGKGRXXXXXXXXXXXXXXXXXDAEEGAAGERTSLTDVPLHMRSDSGGV
Sbjct:    1 MTLRMLWYRAACLLVLATLGNAVTCTNSSAVAVPGYKLALTSTSVYELGAIGDYAPPSTTFTEVVTDYAAVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLLEPAGTFELVLHKNGNFDINLSSMAYHFDVEGTNNSLVGWQSQVSSKCICGPSCTASSAESTKGTCDNLFSGTYNWAFSLSATLQYTYGPDCMSGGDLAGKSSSTVMIAAGGACGAGLVLSLLLMFXXXXXXXXXXXAREDAEAEVRRLARLAALDKKSDWDEVGDFRTLGDLTPLETPVSSGETPTGNEGKGRXXXXXXXXXXXXXXXXXDAEEGAAGERTSLTDVPLHMRSDSGGV 401          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A382X0W6_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382X0W6_9ZZZZ)

HSP 1 Score: 60.1 bits (144), Expect = 1.570e-6
Identity = 39/123 (31.71%), Postives = 63/123 (51.22%), Query Frame = 1
Query:  211 VSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTET-LLEPAGTFELVLHKNGN--FDINLSSMAYH 570
            V LP+ F+F GV+Y+T+ +  +GF+SF A  + +  + P   VP    PS  +  FW +L   ++ + Y     Y   D++ FIV W +  T       TFEL+L+ +    FD  +  M Y+
Sbjct:  117 VDLPFPFSFYGVDYTTITVCSNGFISFGASELESFRNYP---VPGAGGPSPMVAVFWDDLTTSSNGNVYT----YADPDNEYFIVEWSNMRTDNYNSVNTFELILYNDTAPPFDDGIMKMQYN 232          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A7V2JHG3_9BACT (T9SS type A sorting domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7V2JHG3_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 4.000e-6
Identity = 45/152 (29.61%), Postives = 74/152 (48.68%), Query Frame = 1
Query:  211 VSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLL----EPAGTFELVLHKNG---------NFDINLSSMAYHFDVEGTNNSLVGWQSQVSS 627
            + LPWAF+F G EY++++I   G+V FD   V   +S  TS+ P   AP  AIF +W N+      + Y  +T       + FI++W     L     +    F+LVL ++G         N D+N +++  + D  G++  L  + + V S
Sbjct:  601 IQLPWAFDFYGTEYNSLWICESGYVMFDEPGVAYGSSSNTSL-PRPYAPKPAIFPYWDNIGTDEGGNIYASQT------GNAFIITWNDLHHLEWETDDGPYRFQLVLTRDGAIHTQYADMNGDVNSATIGIN-DENGSSGLLTAFNTGVPS 744          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: I4HEZ4_MICAE (PEP-CTERM domain-containing protein n=1 Tax=Microcystis aeruginosa PCC 9807 TaxID=1160283 RepID=I4HEZ4_MICAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.130e-5
Identity = 38/114 (33.33%), Postives = 61/114 (53.51%), Query Frame = 1
Query:  208 AVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADS---DTFIVSWFSTETLLE-PAGTFELVLHKNGN 537
            A+SL + F+F G  YS VY+S +GF++F+  S     SGP S+      PSN +  FW++L  P +    +P   Y+   S     F+V +++     + P  TFE++LH+  N
Sbjct:   77 AISLGFNFDFYGNTYSQVYVSSNGFLTFNPGSDDGCCSGP-SLPDGNSDPSNLVAGFWNDLYPPLT----QPNIFYQTTGSPGSQEFVVGFYNVPNFFDGPQVTFEMILHEGSN 185          
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Match: A0A2M7WKM0_9BACT (Por_Secre_tail domain-containing protein (Fragment) n=1 Tax=candidate division Zixibacteria bacterium CG_4_9_14_3_um_filter_46_8 TaxID=1975520 RepID=A0A2M7WKM0_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 5.400e-5
Identity = 35/123 (28.46%), Postives = 64/123 (52.03%), Query Frame = 1
Query:  196 TDYAAVSLPWAFNFLGVEYSTVYISRDGFVSFDALSVGAATSGPTSVVPSVVAPSNAIFAFWSNLVYPASSSTYRPRTQYEMADSDTFIVSWFSTETLLEPAG-TFELVLHKNGNFDINLSSM 561
            T+    +LP+ FN+ GV Y+++ +  +G++SF++ S    TS   + +PS  AP+N + A W +L   A+ + YR  T      +DT I++W +     +    TFE+++   G       +M
Sbjct:  172 TNTGPYTLPFVFNYYGVNYNSIRVCSNGWISFNSSS----TSYSNTNIPSPSAPTNMLGAMWDDLNPGAAGTVYRYIT------ADTAIIAWVNVPHYYDSGSYTFEIIITSGGAITFQYQTM 284          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348893 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CE88_9STRA0.000e+0100.00Fatty acid desaturase-domain-containing protein n=... [more]
A0A6H5KG61_9PHAE2.600e-13952.48FA_desaturase domain-containing protein n=2 Tax=Ec... [more]
A0A7S3WDU4_9SPIT3.440e-9445.15Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A3A4JVY7_9DELT4.390e-8846.67Alkane 1-monooxygenase n=1 Tax=Myxococcales bacter... [more]
A0A1Y5T9Z1_9PROT1.960e-8444.34Alkane 1-monooxygenase 1 n=1 Tax=Oceanibacterium h... [more]
R1FN77_EMIHU4.090e-8443.25FA_desaturase domain-containing protein n=1 Tax=Em... [more]
R1B9Q8_EMIHU3.890e-8342.29Alkane-1-monooxygenase n=2 Tax=Emiliania huxleyi T... [more]
A0A0M9DTN4_9BACT1.840e-8241.30Alkane 1-monooxygenase n=1 Tax=bacterium 336/3 Tax... [more]
A0A0W0S8S6_9GAMM3.370e-8241.64Alkane monooxygenase n=1 Tax=Legionella cherrii Ta... [more]
A0A3A0DPJ2_9BACT4.190e-8241.42Alkane 1-monooxygenase n=3 Tax=candidate division ... [more]

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BLAST of jgi.p|Trimin1|348893 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YZP9_9STRA6.200e-260100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A382X0W6_9ZZZZ1.570e-631.71Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A7V2JHG3_9BACT4.000e-629.61T9SS type A sorting domain-containing protein n=2 ... [more]
I4HEZ4_MICAE1.130e-533.33PEP-CTERM domain-containing protein n=1 Tax=Microc... [more]
A0A2M7WKM0_9BACT5.400e-528.46Por_Secre_tail domain-containing protein (Fragment... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_32contigContig_32:803080..810167 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348893|estExt_Genemark1.C_Ctg_320106
DescriptionFatty acid desaturase
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2CXPI@1|root,2RYW0@2759|Eukaryota
Evalue8.87e-143
Seed ortholog2880.D7FNV7
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionalkane 1-monooxygenase
Ec32 orthologEc-12_003200.1
TranscriptId349215
TrackFilteredModels1
ProteinId348893
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348893gene_5263Tribonema minus UTEX_B_3156 geneContig_32 803080..810167 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348893Trimin1|348893|estExt_Genemark1.C_Ctg_320106Tribonema minus UTEX_B_3156 polypeptideContig_32 803270..810167 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5263_1exon_5263_1Tribonema minus UTEX_B_3156 exonContig_32 803080..803566 +
exon_5263_2exon_5263_2Tribonema minus UTEX_B_3156 exonContig_32 804330..804700 +
exon_5263_3exon_5263_3Tribonema minus UTEX_B_3156 exonContig_32 806123..806741 +
exon_5263_4exon_5263_4Tribonema minus UTEX_B_3156 exonContig_32 807619..807884 +
exon_5263_5exon_5263_5Tribonema minus UTEX_B_3156 exonContig_32 808106..808197 +
exon_5263_6exon_5263_6Tribonema minus UTEX_B_3156 exonContig_32 808733..808791 +
exon_5263_7exon_5263_7Tribonema minus UTEX_B_3156 exonContig_32 809245..809376 +
exon_5263_8exon_5263_8Tribonema minus UTEX_B_3156 exonContig_32 809910..810167 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_5263UTR5_5263Tribonema minus UTEX_B_3156 five_prime_UTRContig_32 803080..803269 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5263CDS_5263Tribonema minus UTEX_B_3156 CDSContig_32 803270..803566 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5263 ID=mRNA_5263|Name=jgi.p|Trimin1|348893|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2284bp|location=Sequence derived from alignment at Contig_32:803080..810167+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCTGCTGCTGCCGGGGGAAGATGCACATAAAATCAGCGTCTGCAGAGCGA
TGAACGTGGCCCGTCCAAAGCGGAAGCCCAACATGTGTCACACAGCTGCG
GATACTCTGCCGGAAATTGACATTGCGGATATAGCTTCTGCTGCAACCTA
GAAGGAAGACACGCTTGGAAACCTGGAAAGTCTACTCAGTATGGCATCGG
CGGCCACGGCAAAGGAGCAGAAAGTCGCAGCTAGCCCCGAAAGCAGCAGC
AACAGCGTGGTGCCCGTGCTGCTCTGCCTGACGTTAGTCGGCGCTGCAGC
TGCTAATGTGTTCATGGCAAAGCGCATACGGTACATGATGCCTCCGCCCA
AGCAAGCGAGGTGGCAGCCTGCTGACGATCTGAGAGCTGCACAAAGAGCA
GCGGCAAAGAGGAAGTACGACATGGCTTGGGCAGAGCGGGAGGAGCAGGA
ACGCGCAGCCGCTGCAGCACAAAAAGCTGCGCAGGAAGCGCAGCTGCGGC
GCGAGCGCGAGTACCGCGCGCTGCGCGACGAGATGGAGCGCATCCGGCGC
ACCGCCACGCACAGGCGGCAGGGCCTCGCCACCAGCGAGGCGCGCCGCCG
CGGCAGCGCTCCGCCGCACGGCATCGCGCTGCTGCCGCCGAGCGTCGCGC
TGGCGCTGCGCGCGCTGGGGTTCGAGAGCCTGAGCGGCGTGACGGAGGCG
AGCGTGAAGAGGGCGTACCTGGCCAAGGCGCAGGAGCTGCATCCGGATAA
GCACAGGCACTGTGTGGAGTCGGAGGCGGCGCGGCGGCGCAGCGAGGAGC
GCTTCAAGGAGGTCGCCGAGGCGTACCAGCACCTGCTGGAGCACTACTTC
AATGTGAACACCACCGCCGCCACCACCACCGCCACCAGCGCCACCAACTC
AGCAGCCGCCGCCGCAACCACCGGCAACCAGTGGTGGTCTCTGCGCACCC
ACCCCCCTCCCCCCACCGGCACCGCCGCCACCCTCTGCTCCCTCGCCTGG
CTGGCCTGGGCCGTCGCAGTCATCGGCGGCTGCGCGCTGCTCTTTCACCT
GCCGCCATGGCAGTACGCGGCCTTTGTGACCGCGGCCTTCGCGCTGAGCG
CCGCCATCCCCGACCCCGGCACCGCCCCCTGGCCCACCTACGCGCACCTG
TGCCTCCCGATCATCGCTGCCAAAGGGCTGCACGCGGGGGGGGCATGGGC
ATGCTCCCTCATATACTGGGCCTTCGTGCTGCTGCCGGTGCTGGATGCGC
TAGTTGGCGTCGATACGTTCAACCACGCGCGCGCCGTGTACGCGACGCTG
GCGGAGCGGCGCGCGTTCCGCGTCACCACTTGCATTTTCCCGCTTGTTGA
AGTGGCGCTGCTGCTGTGGTCATTCAGGGAGGTGGCGACGCGTGAGCTCA
CTGTGGCGGAGGCGGTGGGATACAGTGTCAGCGTCGGCGTGTACGCAGGC
GGCTTCGGCATACTGATTGCCCATGAGCTGCTGCACCGCAACACTAAGTT
CGAGCGCCTCCTGGGCCGCATCATCATAGCGCTCATGTGCTACGGTCACT
TCAACGTCGAGCACAATCACGGCCACCACCGCACCGTCGCCACCCCCGAA
GACCCCGCAACGGCGCGCTTCGGCGAGTCCTTCTGGTCGTTTCTGCCGCG
CTGCGTGGTCAACTCGTTTCGGAGCGCTGTGACGATTGAGAATGCGCGGC
TCAGGGCGGAGGGGCTGCCGTGGCACCACAACGAGGTGTACAGGTATGGC
GTTGTGTCGGCAACGGTGGCAGTGCTCGTTGCAGCGCTGTTCGGGCGCGC
GGCGCTGTACATGTTCCTGGGACAAAGCCTCATGGGCATCATTCTCTTTG
AGAGCGTCAACTACCTGGAGCATTATGGGTTGGAGCGGAGGGAGGTATCG
CCGGGCAAGTACGAGAGCGTAGGTGTGGAGCACTCGTGGGACTCCCCCTT
TCGGCTCAGCAACATGTGTCTATTCAAGCTGCAGCGCCACGCTGACCACC
ACATCGCAGCTGGCAAGCGCTACCAGCTGCTGTTGGCCCAGAAGGACGCC
CCCCAGCTGCCGTGCGGATACCCCGGCTCCATACTGCTGGCGTTCGTCCC
CCCCGCGTGGTTCCGTGTCATGGACCCCCGCATTCACGCACTGCGCGCGC
GCCACCCGGGACGCGTGTGGCGCTTCGGCCCCGCTTGCGACGGCGTTTCT
GCCGCTGGTAGTTCTGCCGCCGGCGATTCTGCCGCTGGCGGTTATGCCGC
CGGCGCTCCTGTGCAAAAGTCCAAGGATGCGTGA
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protein sequence of jgi.p|Trimin1|348893

>Trimin1|348893|estExt_Genemark1.C_Ctg_320106 ID=Trimin1|348893|estExt_Genemark1.C_Ctg_320106|Name=jgi.p|Trimin1|348893|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=698bp
MASAATAKEQKVAASPESSSNSVVPVLLCLTLVGAAAANVFMAKRIRYMM
PPPKQARWQPADDLRAAQRAAAKRKYDMAWAEREEQERAAAAAQKAAQEA
QLRREREYRALRDEMERIRRTATHRRQGLATSEARRRGSAPPHGIALLPP
SVALALRALGFESLSGVTEASVKRAYLAKAQELHPDKHRHCVESEAARRR
SEERFKEVAEAYQHLLEHYFNVNTTAATTTATSATNSAAAAATTGNQWWS
LRTHPPPPTGTAATLCSLAWLAWAVAVIGGCALLFHLPPWQYAAFVTAAF
ALSAAIPDPGTAPWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPV
LDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVAT
RELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMC
YGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIE
NARLRAEGLPWHHNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGI
ILFESVNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRH
ADHHIAAGKRYQLLLAQKDAPQLPCGYPGSILLAFVPPAWFRVMDPRIHA
LRARHPGRVWRFGPACDGVSAAGSSAAGDSAAGGYAAGAPVQKSKDA*
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mRNA from alignment at Contig_32:803080..810167+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5263 ID=mRNA_5263|Name=jgi.p|Trimin1|348893|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7088bp|location=Sequence derived from alignment at Contig_32:803080..810167+ (Tribonema minus UTEX_B_3156 )
GCTGCTGCTGCCGGGGGAAGATGCACATAAAATCAGCGTCTGCAGAGCGA TGAACGTGGCCCGTCCAAAGCGGAAGCCCAACATGTGTCACACAGCTGCG GATACTCTGCCGGAAATTGACATTGCGGATATAGCTTCTGCTGCAACCTA GAAGGAAGACACGCTTGGAAACCTGGAAAGTCTACTCAGTATGGCATCGG CGGCCACGGCAAAGGAGCAGAAAGTCGCAGCTAGCCCCGAAAGCAGCAGC AACAGCGTGGTGCCCGTGCTGCTCTGCCTGACGTTAGTCGGCGCTGCAGC TGCTAATGTGTTCATGGCAAAGCGCATACGGTACATGATGCCTCCGCCCA AGCAAGCGAGGTGGCAGCCTGCTGACGATCTGAGAGCTGCACAAAGAGCA GCGGCAAAGAGGAAGTACGACATGGCTTGGGCAGAGCGGGAGGAGCAGGA ACGCGCAGCCGCTGCAGCACAAAAAGCTGCGCAGGAAGTGAGTGAAAATA TCCTTAGCACATGGCGACCTGCCGATTTGTAGGGAAACTCAAAACTGATT TGTGTTCAGTCCCCGCATTGAATTCAATTAAAATGAGTTGATCAAATAGC ATTTGACCCCAACGCTCCAATTGCAACATTCGACAGTCTGTGCTGCGTGT GTACAAGGTGGCTCGCGCCGAAAGCTGCATGTGCGCATGGTTGGCCCAGC AGTGGTGCGAGTAGCGTATAAAGAGCATCTGGTACCACGGCTTTCTGTTA TCGAAAGCATACGTCCAGTCAAGCAGGTGCTCATGTACCGTCGGACGACA TGCAGCCAGGGTCTGGCGCCGACTCACAGTTTGTGGCATCGGTATTGATA CAGCATTCTAGGTGGTCGGTGCCGGTACCGGTTTTGCGTGAATCAATGTC ATCAGTGGGCATGAGTAACACACCGGCATCAGGCAATGTGCTCACCCCAC AAACCATTTTCAGTGGCGATGAAATGAATGCGCTCATTCACCGTAGCCTA TGCTGCATGCACAGAGCTCTGTTGACCGTGCGCCCAGCCAAATGTGAGTC ACAATGTGACAGCTACGAGGAATCTCACCGCTTTGAGTGACCTCTTTCAC AGCACGTGAAGCTCCAACAGGCAACTTTGAGAACTGCTGTTTTTGCGGAA CGAGTCGGCATGAGTACAAGTGACAACGCGCCGTGCGCATACTCAGACCA CGGTCAGCTTCACTGCCGCGTGCCTCGCACTCCTTCCGCGACGCGCGCAG GCGCAGCTGCGGCGCGAGCGCGAGTACCGCGCGCTGCGCGACGAGATGGA GCGCATCCGGCGCACCGCCACGCACAGGCGGCAGGGCCTCGCCACCAGCG AGGCGCGCCGCCGCGGCAGCGCTCCGCCGCACGGCATCGCGCTGCTGCCG CCGAGCGTCGCGCTGGCGCTGCGCGCGCTGGGGTTCGAGAGCCTGAGCGG CGTGACGGAGGCGAGCGTGAAGAGGGCGTACCTGGCCAAGGCGCAGGAGC TGCATCCGGATAAGCACAGGCACTGTGTGGAGTCGGAGGCGGCGCGGCGG CGCAGCGAGGAGCGCTTCAAGGAGGTCGCCGAGGCGTACCAGCACCTGCT GGAGCACTACTTCAATGTGAAGTAGGAGGCTGCAGCACTACTTCAGTGTG AAGTAGGCGGAGGCTACTTCAGCCGTCAACTGGCAGCGGGGACGCATTGG GGGGGGCGGGCGATGGTGTCTGCGTGCAGACAGCGCCCGCTGTGGTCACT GGTTTCATGAAGGAGTGGTCTAGCAATGCCGTGAGGCCTGCTAAACAAGG CCGGTGAGGCAGTTTGCACTTGCGTCGTTCAGGCGGCGCCAAGTACAAGC GAGCCGTTGCATGTGTGCCGAGGCACAATGCGGAGCGCAGCTTGCTGTGC ACAAGCGGCTCCACCAACAAATATGCATGCGGCATGCCACGTGTGTCATG CGCGCCTATGAGTCAGCACTCAACTAGGCAAAAGTTGGGTCTGGATACAA CCATGACGGCAGTGTCAGGTGCAACAGAGGTGTCATGGCTAGAGCGGCTA GCGCATCATCCTTGCAACGAGACGAAAAAGTTGAATGACATGGACTTGGA CAGTTTCGGAAGTGACCAATGCGCTTGCTGTGCAGGCCATAAGCTGCTCC AATGACAGCCTGCACTCTCAGGTTAGATGTTATTAGTGTGACACTGCAAT GAGACTCCTCTTTGTGTGTATCGCGTCTCGAGCTTCTGCATCCTGATGTG CACGGTACGTTGGCTGTTTCACGGCAATATTATGGCACCTGTGCATCTGA TGGCCATGTTGTGGTCAGCAAGCCCCAAGATACCTACAAAAAACAGGGGT GCAAGTATATGCACATGCACGTACGATTTGAATCAACGTTGAGCGATGTC ATTTAGACTCAGCGCGCATTGATGTGCTTTGTCACAAGGATACATGTGGA CTATAGTAAAGCTCATCAATCACAATCATCAAGGATCTTACACCTTTTGC AAGTTCAACTGTCCCTTCGGCGTCAACTGCAAGTTGAATCGGCGAGCGAT CTTTTGCATTGCCGGTGGCAAACCAGGTCGGTCTGCCCCTCCTAGGATCC TGACCTAGGCCGCTGTGGACGCTGCAAATTTCCGGCGGCTGGTTCTGGTC TTGATCCACCAAGCATCCACCCATCCACCCAACGGAGAACCTCAGGCCAC GCAAATGCCGCCGTATACGACCACGGAGAGTACGGCCAACGGGGCTCTGC AGCAGTTGCCTGCCCAGATAAAGTTGCAGAGGTGCGAATAACTAACCTCG TTGCACAGTTGCCATCAATCTCCTGTCCGCTACATGGGAGGTTTGCAAAT ATCACTGATCAACTGCAACGTGGCGATGCAGGCTGCATTTTTTCTTGAGC TAGTCGTGTTCTTGAAGGCGATCCTTCAATCTGTACGCCTACTTCTTCCT GTCGTTTCGAAATCTGTGTTGGCGTATTTGACACGTCGCAAGCACCGTTG TGTTGTTTCGGCTCAAACGATCCTGCACGCCGCTGTACCGCAGCACCACC GCCGCCACCACCACCGCCACCAGCGCCACCAACTCAGCAGCCGCCGCCGC AACCACCGGCAACCAGTGGTGGTCTCTGCGCACCCACCCCCCTCCCCCCA CCGGCACCGCCGCCACCCTCTGCTCCCTCGCCTGGCTGGCCTGGGCCGTC GCAGTCATCGGCGGCTGCGCGCTGCTCTTTCACCTGCCGCCATGGCAGTA CGCGGCCTTTGTGACCGCGGCCTTCGCGCTGAGCGCCGCCATCCCCGACC CCGGCACCGCCCCCTGGCCCACCTACGCGCACCTGTGCCTCCCGATCATC GCTGCCAAAGGGCTGCACGCGGGGGGGGCATGGGCATGCTCCCTCATATA CTGGGCCTTCGTGCTGCTGCCGGTGCTGGATGCGCTAGTTGGCGTCGATA CGTTCAACCACGCGCGCGCCGTGTACGCGACGCTGGCGGAGCGGCGCGCG TTCCGCGTCACCACTTGCATTTTCCCGCTTGTTGAAGTGGCGCTGCTGCT GTGGTCATTCAGGGAGGTGGCGACGCGTGAGCTCACTGTGGCGGAGGCGG TGGGATACAGTGTCAGCGTCGGCGTGTACGCAGGCGGCTTCGGCATACTG ATTGCCCATGAGGTGAGTCTCTTCTTGAAGTACAGTAGTTGTATACTTCA ATTCACAAGGACGCCGGACGCGAGGGGTGGCTTTGGCATCCTGAATGCCC GTAAAAGACATCTCCTCCTGGAATACCATCTTGGCTACTTGATTGAGGAC ACTGGACGCTTTATTCTGTTGTTAGCTCCAAGGCCCATGCAATAAGCACA GGAGACCCTTTTTCTTCTTGCTGTGCCAAAGACTGTCCAGCCCCCCCTGT TCATGTGTGCGCCGGTATCCTGCCACCCGCCCACAAGGTGAGTCTGGTCT TGAAGTACTGTGGCTGGTTGAAGTGGCCGGTTGCGCAGTTGACACGCATT GACTTTGCTGTCGAGCAACGCTGGCAACAACACGGCTGGCGATGGTGGCG GTACAGCGAGGCGCGCAGCCTGCCTGGGCTGTTGCGGTTTCTGAGCATCC ACTGCTCCCTAGGAAATTTGGACGAGCCCTGTTTAGCTGCAGAATAGCGC GTTGACTGATGCATCAGCACAATCATCAGATGTGAAGGTAGAGCGCCACA ACTCAGGCAACCGATGCCGAGGCTGGCATGAAGGCTACCACTCCTGCTGT CTTGTATCGCGCAAGCTGCAATCGCCAGGCTTGTCATGACAGCCGCTGGA TGTGCCGCTGTTGCGTTGCGCGCACGCTCGTGCCGTCGCATCCGCTGCAC CGAAACACATCAACCGTGACAGGCCTGACCCAGCACCACGATAGCGCCGA CGTATTACGGCCACCTCCAACTCTCACTTTCCCACCGGTGTGCAATCACA TGCCTAGTCTGTGCCCACACACAATGTACTGAACCTCCCCCGTCTCCCCC CCTCCCCTCCCCCACACCCATTGTCACCCCTCCTGTCAGCTGCTGCACCG CAACACTAAGTTCGAGCGCCTCCTGGGCCGCATCATCATAGCGCTCATGT GCTACGGTCACTTCAACGTCGAGCACAATCACGGCCACCACCGCACCGTC GCCACCCCCGAAGACCCCGCAACGGCGCGCTTCGGCGAGTCCTTCTGGTC GTTTCTGCCGCGCTGCGTGGTCAACTCGTTTCGGAGCGCTGTGACGATTG AGAATGCGCGGCTCAGGGCGGAGGGGCTGCCGTGGCACCACAACGAGGTG TACAGGTGTGTACTGTGCCTGTCCTGGCGTGTACTGCGTGACTGCGTATG ACGCTGCGTTTTTTGACGATGCTGTTTGTATGCACGGGAGTGTGTGTGGG GGGGGGGGCACGATTGTCGCCTCCTCACGCTGCGTGTTCCCAGATAATGG GCAGAATCTGTCAGGAATTCTTCTGCTTTTTCCAGGAGTCAAGCTGACTT CTTGCTGGCGATGTTTTGCTGCGCAGGTATGGCGTTGTGTCGGCAACGGT GGCAGTGCTCGTTGCAGCGCTGTTCGGGCGCGCGGCGCTGTACATGTTCC TGGGACAAAGCCTCATGGGTGAGTTTCGTCTGGTGTTGTGTATCGATCTG TACAGGCAGGGCACGCTGCATTTTTCTCGCTTTCACCGGACACAGTTGGC AAATGATCATGGAAAGGCTGCCTCGCTGTGCTTCAATGTGAGCCGAGTGG TTGAGGCATGAGCAAGCATGCATCCGCACAACGGTTTGAACTTCTGCACT CAAGAAGACGGAGAAGAAGAAGAAGCAATGTGGCAGCAAAAGTGGCACAT CAAGCACGGCTTCACACGGCTGATACAGCCCACCATTACCACCTGGCCCT GTCTCTTGCCTGCATGTGACTGTACTACCTCATGTAAAAACGACGTACTT CAAAGTATATGGACACAATTTTTCTTCTTCTTGCATGCATGTATCTGTAT GGGACAGGCATTGAAAGGAGCTGGTTCACTGTGCAGAGTTAGAGTTACAA GCCGCATCTGCCTTTTTCCGTCCACACACTAGTTGAGCATTGCCACTGAA GCAGTGCACATTGGCTGCTACTTCACTTCAGTTTGTTTATTTGTGTTTTG CAGGCATCATTCTCTTTGAGAGCGTCAACTACCTGGAGCATTATGGGTTG GAGCGGAGGGAGGTGAGAACGAGACCTACATTATTCTGCTAATGCTAGCT CTAACCCCTAACACAAACCCTGCCAAGCAGTTCTTGCATTGGGAGAGCTT CTTAGCTAGCCTTGAAAGTGTGCTAGGGGTTGATTCAGACACTGTGCTTG GCATGCGTAAGCCACCTGAGGTGCCACCGCACATGCGCCTTGTCCGTTGT TGAATTTAAGGAGCACTGCCACCTTTCATTGCTTACTATCAACAAACAGG GCCCTCACGCATAGAACTAGCGATGAAGCAATAACAACGGGAACACGGAA CGTGAGTATGCATGCGGAAGGCGCGTCAGTCACCCGCTTAGTCAGCAACA ACTTGGGCGGCGCGCTGCGGTCACAGCATCCATGGGGATACCCACAATGC TGACATCCAGCGCGAAACACAAGTGATTGAGCTGCGCATGCTGCATGTGT GCTGCGCACGAGCAGGTATCGCCGGGCAAGTACGAGAGCGTAGGTGTGGA GCACTCGTGGGACTCCCCCTTTCGGCTCAGCAACATGTGTCTATTCAAGC TGCAGCGCCACGCTGACCACCACATCGCAGCTGGCAAGCGCTACCAGGTG GGGTCGCGGTTCATGAATTTGATATCAGAGTTCATGAATTTGATTCGTTT TTCTTCCGAATGGACAGCGTACGCCCTGCCATAGGGTGAAGCATTTGGCG AGTGAAGTGTCTGTTGACTACGCGTAGCAACGGATTCTGTGCCGAATTGA CGTCCACACTAGACCAGTCCACATGTTGAAGTTACAGAGCCGGCATGCGC CCACGTTTCTCACTTGTTTCCCCAAAGCATTGCGCTGCGCGCAAGCTAAG ACCGTTGCTGGGGCCACTGCGTTTGCTGTCAAAGTTCTGTAGCTGCTCAT GCCCCAGAACCCCCCATTGCTGCTGCGCACCACCATTTTGTTTCCTATCA GCGCCCTCACAAACATGCGCGTCGATTTGACCGACAACTGCCCGCATCAC CACCATGCCTCCTGCACCACTCTCATCGCTGCTGCGCATTCACCCATGCG AGCGTCCCCCCCCCCCTACCCTAACCCTACCCCTACCCTACCCCTGACCC TACCCCTACCCCCCCCCCTTTATCGCGCAGCTGCTGTTGGCCCAGAAGGA CGCCCCCCAGCTGCCGTGCGGATACCCCGGCTCCATACTGCTGGCGTTCG TCCCCCCCGCGTGGTTCCGTGTCATGGACCCCCGCATTCACGCACTGCGC GCGCGCCACCCGGGACGCGTGTGGCGCTTCGGCCCCGCTTGCGACGGCGT TTCTGCCGCTGGTAGTTCTGCCGCCGGCGATTCTGCCGCTGGCGGTTATG CCGCCGGCGCTCCTGTGCAAAAGTCCAAGGATGCGTGA
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Coding sequence (CDS) from alignment at Contig_32:803080..810167+

>mRNA_5263 ID=mRNA_5263|Name=jgi.p|Trimin1|348893|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2094bp|location=Sequence derived from alignment at Contig_32:803080..810167+ (Tribonema minus UTEX_B_3156 )
ATGGCATCGGCGGCCACGGCAAAGGAGCAGAAAGTCGCAGCTAGCCCCGA
AAGCAGCAGCAACAGCGTGGTGCCCGTGCTGCTCTGCCTGACGTTAGTCG
GCGCTGCAGCTGCTAATGTGTTCATGGCAAAGCGCATACGGTACATGATG
CCTCCGCCCAAGCAAGCGAGGTGGCAGCCTGCTGACGATCTGAGAGCTGC
ACAAAGAGCAGCGGCAAAGAGGAAGTACGACATGGCTTGGGCAGAGCGGG
AGGAGCAGGAACGCGCAGCCGCTGCAGCACAAAAAGCTGCGCAGGAAGCG
CAGCTGCGGCGCGAGCGCGAGTACCGCGCGCTGCGCGACGAGATGGAGCG
CATCCGGCGCACCGCCACGCACAGGCGGCAGGGCCTCGCCACCAGCGAGG
CGCGCCGCCGCGGCAGCGCTCCGCCGCACGGCATCGCGCTGCTGCCGCCG
AGCGTCGCGCTGGCGCTGCGCGCGCTGGGGTTCGAGAGCCTGAGCGGCGT
GACGGAGGCGAGCGTGAAGAGGGCGTACCTGGCCAAGGCGCAGGAGCTGC
ATCCGGATAAGCACAGGCACTGTGTGGAGTCGGAGGCGGCGCGGCGGCGC
AGCGAGGAGCGCTTCAAGGAGGTCGCCGAGGCGTACCAGCACCTGCTGGA
GCACTACTTCAATGTGAACACCACCGCCGCCACCACCACCGCCACCAGCG
CCACCAACTCAGCAGCCGCCGCCGCAACCACCGGCAACCAGTGGTGGTCT
CTGCGCACCCACCCCCCTCCCCCCACCGGCACCGCCGCCACCCTCTGCTC
CCTCGCCTGGCTGGCCTGGGCCGTCGCAGTCATCGGCGGCTGCGCGCTGC
TCTTTCACCTGCCGCCATGGCAGTACGCGGCCTTTGTGACCGCGGCCTTC
GCGCTGAGCGCCGCCATCCCCGACCCCGGCACCGCCCCCTGGCCCACCTA
CGCGCACCTGTGCCTCCCGATCATCGCTGCCAAAGGGCTGCACGCGGGGG
GGGCATGGGCATGCTCCCTCATATACTGGGCCTTCGTGCTGCTGCCGGTG
CTGGATGCGCTAGTTGGCGTCGATACGTTCAACCACGCGCGCGCCGTGTA
CGCGACGCTGGCGGAGCGGCGCGCGTTCCGCGTCACCACTTGCATTTTCC
CGCTTGTTGAAGTGGCGCTGCTGCTGTGGTCATTCAGGGAGGTGGCGACG
CGTGAGCTCACTGTGGCGGAGGCGGTGGGATACAGTGTCAGCGTCGGCGT
GTACGCAGGCGGCTTCGGCATACTGATTGCCCATGAGCTGCTGCACCGCA
ACACTAAGTTCGAGCGCCTCCTGGGCCGCATCATCATAGCGCTCATGTGC
TACGGTCACTTCAACGTCGAGCACAATCACGGCCACCACCGCACCGTCGC
CACCCCCGAAGACCCCGCAACGGCGCGCTTCGGCGAGTCCTTCTGGTCGT
TTCTGCCGCGCTGCGTGGTCAACTCGTTTCGGAGCGCTGTGACGATTGAG
AATGCGCGGCTCAGGGCGGAGGGGCTGCCGTGGCACCACAACGAGGTGTA
CAGGTATGGCGTTGTGTCGGCAACGGTGGCAGTGCTCGTTGCAGCGCTGT
TCGGGCGCGCGGCGCTGTACATGTTCCTGGGACAAAGCCTCATGGGCATC
ATTCTCTTTGAGAGCGTCAACTACCTGGAGCATTATGGGTTGGAGCGGAG
GGAGGTATCGCCGGGCAAGTACGAGAGCGTAGGTGTGGAGCACTCGTGGG
ACTCCCCCTTTCGGCTCAGCAACATGTGTCTATTCAAGCTGCAGCGCCAC
GCTGACCACCACATCGCAGCTGGCAAGCGCTACCAGCTGCTGTTGGCCCA
GAAGGACGCCCCCCAGCTGCCGTGCGGATACCCCGGCTCCATACTGCTGG
CGTTCGTCCCCCCCGCGTGGTTCCGTGTCATGGACCCCCGCATTCACGCA
CTGCGCGCGCGCCACCCGGGACGCGTGTGGCGCTTCGGCCCCGCTTGCGA
CGGCGTTTCTGCCGCTGGTAGTTCTGCCGCCGGCGATTCTGCCGCTGGCG
GTTATGCCGCCGGCGCTCCTGTGCAAAAGTCCAAGGATGCGTGA
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