mRNA_5181 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164529
Unique NamemRNA_5181
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: A0A835Z3E5_9STRA (Tubulin-tyrosine ligase/Tubulin polyglutamylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E5_9STRA)

HSP 1 Score: 702 bits (1811), Expect = 1.520e-255
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 1
Query:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGADGSRCIEVLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVRRAEQTPRCVASTAPGRTTRCPLPQCRTCAKMRCIDETQALTRMGTEVSV 1038
            NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGADGSRCIEVLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVRRAEQTPRCVASTAPGRTTRCPLPQCRTCAKMRCIDETQALTRMGTEVSV
Sbjct:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGADGSRCIEVLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVRRAEQTPRCVASTAPGRTTRCPLPQCRTCAKMRCIDETQALTRMGTEVSV 346          
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: F0YJJ4_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ4_AURAN)

HSP 1 Score: 382 bits (980), Expect = 3.580e-129
Identity = 179/304 (58.88%), Postives = 230/304 (75.66%), Query Frame = 1
Query:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGAD--GSRCIEVLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVRRAEQT 906
            NV+W+DVA IGER+ +L PWQR+NHFPGM+ +ARK R+AQ L++MRR FP +Y FYPRTWVLP E    R++FD+ GRS+R  IVKPD+GCQG+GI+LTQ  +  +  ++  V Q Y+R+P LIDGYKFDLR+YVL+TS +PLR+Y F DGL RLCT  Y++P A N+  RCMHLTNYAIN+ ++NF  N +A   + GSKRSLRW ++++    G+A+A  +W RMG  +VK +V +LP L REY + F  D  GSRC EVLG D ++D ALKPWL+EVNHLPSFATDSPLD +IK R  EQT
Sbjct:    6 NVYWIDVANIGERMSKLRPWQRINHFPGMSNIARKNRLAQNLEKMRREFPKEYSFYPRTWVLPLELADFRAQFDSMGRSSRFYIVKPDSGCQGRGIFLTQAFES-ISPLEQVVAQHYIRKPFLIDGYKFDLRLYVLMTSCKPLRMYLFHDGLVRLCTEEYLKPNAENVAMRCMHLTNYAINKHNENFQTNENAYAGNVGSKRSLRWFMDYIAAEKGQAKADALWWRMGTMSVKVIVSILPTLVREYESIFFKDTGGSRCFEVLGVDIIIDHALKPWLVEVNHLPSFATDSPLDQNIKSRVIEQT 308          
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: A0A7S3ZQE5_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQE5_9STRA)

HSP 1 Score: 365 bits (938), Expect = 1.640e-117
Identity = 177/341 (51.91%), Postives = 231/341 (67.74%), Query Frame = 1
Query:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGA--------------------------DGSRCIEVLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVRRAEQTPRCVASTAPGRTT 945
            NV+W+D++ I ER+ +L PWQR+NHFPGM+ +ARK R+AQ L++MRR F  +Y FYPRTWVLP E    R++FD+ GRS++  I+KPD+GCQG+GI+LTQ  +  +  ++  V Q Y+R+P LIDG+KFDLR+YVLVTS +PLRVY FRDGL RLCT  Y++P   N+  RCMHLTNYAINR S+NF  N      D GSKRSLRW ++++    G+ R+  +W RMG   VK ++ +LP L REY +TF                            +GS+C EVLG D ++D+ALKPWL+EVNHLPSFATDSPLD+ IK R  EQT   V + A  R T
Sbjct:   61 NVYWIDISNIAERMSKLRPWQRINHFPGMSNIARKNRLAQNLEKMRRGFQKEYNFYPRTWVLPLELADFRAQFDSNGRSSQFYIIKPDSGCQGRGIFLTQNFES-ISPLEQVVAQHYIRKPFLIDGFKFDLRLYVLVTSCKPLRVYLFRDGLVRLCTQKYLKPNPGNVAMRCMHLTNYAINRHSENFQGNETLGACDIGSKRSLRWFMDFLANEKGQRRSDALWSRMGAMVVKVILSILPTLVREYESTFNKGIRSEPKQTYNSTSCENQLDHHPQTIEGSQCFEVLGVDVIIDQALKPWLVEVNHLPSFATDSPLDSDIKARVIEQTMSIVRAKASDRYT 400          
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: B8BZF1_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZF1_THAPS)

HSP 1 Score: 323 bits (827), Expect = 1.250e-105
Identity = 154/305 (50.49%), Postives = 204/305 (66.89%), Query Frame = 1
Query:    1 NVHWVDVAAIGERL-RELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGADGS-------RCIEVLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVR 891
            +V W+D + + ++L   + PWQR+NHFPGM  + RK R+AQ+L+ M++ FPL+Y FYP T+ LP      ++ FD+ G+S  T IVKPD   QGKGI+LT +++D        V Q Y+R PLLID  KFDLR+YVLVTS  PLRVY FRDGL RLCT  Y RP ++N  DRCMHLTNY++N+RSD +  + D      GSKRS++WLLE + +   EA A  MW ++G   V T++ +LP L REY + FG D S       RC EVLG D ++D+ L+P+LIEVNHLPS+ TDS +D  IK R
Sbjct:   29 HVIWIDRSFVSDKLFLSIQPWQRINHFPGMTNICRKTRLAQSLELMKKQFPLEYSFYPTTYSLPHNIATFKTLFDSNGQSKTTFIVKPDGSAQGKGIFLTNKIEDVENRSMCCVAQQYIRNPLLIDKKKFDLRIYVLVTSCSPLRVYLFRDGLVRLCTEEYTRPNSSNRHDRCMHLTNYSVNKRSDKYERDGDESSAKLGSKRSIKWLLEMLAKERSEAEANEMWSKVGDICVMTIISILPTLRREYNSVFGKDSSSDVLGKSRCFEVLGVDILIDDGLRPYLIEVNHLPSWGTDSVIDEDIKSR 333          
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: A0A6H5KPS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS6_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 1.210e-102
Identity = 160/256 (62.50%), Postives = 197/256 (76.95%), Query Frame = 1
Query:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVG-QTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGADGS 765
            +V+W+DV AI ER++ L  WQR+NHFPGM+ VARK R+AQ LDRMRR FP +Y FYPRTWVLP E    ++EFD +G+S RT IVKPD+GCQG+GI+LTQ L+ R+ + +SQV QLYV+RPLLI+G+KFDLR+YVLVTS+ PLRVYAF+DGL RLCT  Y R ++ N+G RCMHLTNYA+N+ SDNFVAN  A   D GSKRSLRWLL W+  +  G+ +A  +WR+MG    KTLV VLP LHREY   FG D  
Sbjct:   36 HVYWIDVPAIVERMQHLHRWQRINHFPGMSNVARKGRLAQNLDRMRRTFPHEYSFYPRTWVLPVEWGTFKTEFDTSGKSTRTFIVKPDSGCQGRGIFLTQNLE-RVEATESQVAQLYVQRPLLIEGFKFDLRLYVLVTSVIPLRVYAFKDGLTRLCTEEYSRASSDNLGRRCMHLTNYAVNKGSDNFVANDQA---DLGSKRSLRWLLGWIAAERGGQEKADALWRKMGGAITKTLVSVLPILHREYLHMFGHDNG 287          
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: D8LM22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM22_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 2.430e-101
Identity = 161/254 (63.39%), Postives = 199/254 (78.35%), Query Frame = 1
Query:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVG-QTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGAD 759
            +V+W+DV AI ER++ L  WQR+NHFPGM+ VARK R+AQ LDRMRR FP +Y FYPRTWVLP E  A ++EFDA+G+S RT IVKPD+GCQG+GI+LTQ+L+ R+ + +SQV QLYV+RPLLI+G+KFDLR+YVLVTS+ PLRVY F+DGL R CT  Y R ++ N+G RCMHLTNYA+N+ SDNFVAN  A   D GSKRSLRWLL W+  +  G+ +A  +WR+MG    KTLV VLP LHREY  TFG D
Sbjct:   69 HVYWIDVPAIVERMQHLHRWQRINHFPGMSNVARKGRLAQNLDRMRRTFPHEYSFYPRTWVLPVEWGAFKTEFDASGKSTRTFIVKPDSGCQGRGIFLTQDLE-RVEATESQVAQLYVQRPLLIEGFKFDLRLYVLVTSVIPLRVYVFKDGLTRFCTEEYSRASSDNLGRRCMHLTNYAVNKGSDNFVANDQA---DLGSKRSLRWLLGWIAAERGGQEKADALWRKMGGAITKTLVSVLPTLHREYLHTFGHD 318          
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: A0A7S1UJL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJL5_9STRA)

HSP 1 Score: 306 bits (785), Expect = 2.690e-99
Identity = 140/250 (56.00%), Postives = 188/250 (75.20%), Query Frame = 1
Query:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATF 750
            N++W+DVA I +R++ L PWQR+NHFPGM  +ARKARMAQ L++MRR FP +Y FYP+TWVLP+E    ++ FD+ G+S +  I+KPD+GCQG+GI+LT  LD   L  +SQV Q Y+RRPLLI+ YKFDLR+YVL+TS +PLR+Y FRDGL RL T  YV+P+ AN+ DRCMHLTNYA+N+ +DNF   AD    ++GSKRSL W + W+ +T G+ +A+ +W+R+ Q   KTL+ V+P L REY   F
Sbjct:   97 NIYWIDVANIYDRMQRLRPWQRINHFPGMTNIARKARMAQNLEKMRRLFPSEYNFYPKTWVLPTEFGDFKTHFDSHGKSRQIFIIKPDSGCQGRGIFLTSSLDQVDLQ-ESQVAQQYIRRPLLIEEYKFDLRIYVLMTSCKPLRIYLFRDGLVRLATQEYVKPSKANINDRCMHLTNYAVNKTNDNFQ-KADQAMGESGSKRSLAWFMRWIAETRGDKKAKIVWQRISQLCCKTLLAVVPTLVREYENHF 344          
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: T0S0N8_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S0N8_SAPDV)

HSP 1 Score: 311 bits (798), Expect = 8.720e-98
Identity = 153/312 (49.04%), Postives = 204/312 (65.38%), Query Frame = 1
Query:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGADGSRCIE----------VLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVRRAEQT 906
            NVHW+DV       + + P+Q+VNHFPGM+ +ARK+++A+   RM + FP +Y F P+TW+LP +      +F+A G S+R  I+KPD  CQG+G++LT++L D +   D  V Q Y+  PLLI G KFDLR+YVLV+SI PLRVY F+DGL R+CT+ Y  P AANM  + MHLTNYAIN+RS+NF  N     D  GSKRSLRW L W+G+TH  A+   +W  +G   +K+++ V P +  EY +TF     R  +          VLG D +VD+ LKPWL+EVNHLPSF  DSPLD +IK R   QT
Sbjct:   49 NVHWIDVPDFLNTFKHMQPFQKVNHFPGMSNLARKSKLARNFQRMTKLFPSEYDFCPKTWILPFDYTEFSQQFNADGTSSRAFIIKPDHSCQGRGVFLTKQLKD-VNKTDIFVAQRYLPSPLLIGGKKFDLRIYVLVSSISPLRVYLFQDGLVRMCTADYTAPNAANMEQKFMHLTNYAINKRSNNFEKNKHEAVDGQGSKRSLRWFLSWLGETHDSAKVDALWEGIGDICLKSILAVQPTIAHEYHSTFAKFPKRVDDPPNVASSSFAVLGMDVLVDDHLKPWLLEVNHLPSFHCDSPLDWNIKERLLNQT 359          
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: A0A812LT48_9DINO (Ttll6a protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812LT48_9DINO)

HSP 1 Score: 300 bits (768), Expect = 8.930e-96
Identity = 154/323 (47.68%), Postives = 204/323 (63.16%), Query Frame = 1
Query:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAG-VARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELD-------DRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRP-------LRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFGAD------GSRCIEVLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVRRAEQT 906
            N+HW+D A IG+ +R++ PW R+NHFPGM   +ARK R+A+ + RM+R FP  YRF P TWV+P +   L   F  +  S    IVKPD  CQG+GI+LT ELD       +     ++ VVQ Y+ RP+LI+G KFDLR+Y LV++ +        +R + FRDGL RLCT+ Y  P A  M ++CMHLTNYA+N+ S NF  N D E D  GSKRSLRW + ++G+T+GE   R++W ++    +KT++ V P L  EY   F  D      G RC E+LG D M+D  +KP+LIEVNHLPSF  DSPLD  IK R   QT
Sbjct:   49 NIHWIDDANIGDWMRKVEPWMRINHFPGMNNALARKTRLARNMTRMQRLFPAAYRFVPPTWVIPDDLTDLEKRFGNSQESKVFYIVKPDHLCQGRGIFLTTELDRLRQAAEESRKKNEATVVQRYLSRPMLIEGLKFDLRLYFLVSAKKASGEAGLDMRCFLFRDGLVRLCTTPYQPPTAETMNEKCMHLTNYAVNKNSSNFQQN-DGEDDGAGSKRSLRWFMSYIGETYGEKERRKLWLKLMGVCMKTVLMVKPTLETEYDGAFPRDLTGGQMGCRCFELLGIDVMLDAKMKPYLIEVNHLPSFTCDSPLDEDIKRRLVSQT 370          
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Match: A0A5D6XUQ9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUQ9_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.170e-94
Identity = 154/328 (46.95%), Postives = 208/328 (63.41%), Query Frame = 1
Query:    1 NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFPLDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRDGLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGSKRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATFG-----------------------ADGSR---CIEVLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVRRAEQT 906
            N+HW+DV       + L P+Q+VNHFPGM+ +ARK+++A+  +RM++ FP ++ F PRTW+LP +    ++ F+A G S +T IVKPD  CQG+G++LT+ L  ++   D  V Q Y+ RPLLI G KFDLR+YVLVTS  PLRVY F+DGL R+CT+ YV P A NM  R MHLTNYA+N+ ++NF  N DA  D +GSKRSLRW   W+ ++H E R   +W ++G   +K+++ V P L +EYR+TF                        +DGS           D +VDE LKPWL+EVNHLPSF  DSPLD +IK R   QT
Sbjct:   51 NLHWIDVPDFLNTFKILLPYQKVNHFPGMSNLARKSKLARNFERMKKLFPDEFDFCPRTWILPFDLHDFQTHFNADGVSYKTFIVKPDHSCQGRGVFLTRNLS-QISRTDVLVAQQYIARPLLIAGKKFDLRIYVLVTSCSPLRVYLFKDGLVRMCTADYVTPNANNMEQRFMHLTNYAVNKHANNFELNKDASADGSGSKRSLRWFFAWLKESHDEPRVDALWDKIGDICLKSILAVQPLLAQEYRSTFAKNLRKSVCSASPGGPSQLPGSGLSDGSTRPSTASEASMDVLVDEGLKPWLLEVNHLPSFGCDSPLDWNIKERLISQT 377          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164529 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z3E5_9STRA1.520e-255100.00Tubulin-tyrosine ligase/Tubulin polyglutamylase (F... [more]
F0YJJ4_AURAN3.580e-12958.88Uncharacterized protein (Fragment) n=2 Tax=Aureoco... [more]
A0A7S3ZQE5_9STRA1.640e-11751.91Hypothetical protein n=4 Tax=Pelagomonas calceolat... [more]
B8BZF1_THAPS1.250e-10550.49Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A6H5KPS6_9PHAE1.210e-10262.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM22_ECTSI2.430e-10163.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1UJL5_9STRA2.690e-9956.00Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
T0S0N8_SAPDV8.720e-9849.04Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A812LT48_9DINO8.930e-9647.68Ttll6a protein n=1 Tax=Symbiodinium sp. CCMP2592 T... [more]
A0A5D6XUQ9_9STRA1.170e-9446.95Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_32contigContig_32:237044..241241 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164529|e_gw1.32.193.1
BRITEko00000,ko01000,ko03036,ko04812
KEGG koko:K16582
Descriptionpositive regulation of cilium movement
COG categoryKT
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2158@1|root,KOG2158@2759|Eukaryota
Evalue3.25e-131
Seed ortholog44056.XP_009041052.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTubulin-tyrosine ligase/Tubulin polyglutamylase
Ec32 orthologEc-14_002580.1
TranscriptId164851
TrackFilteredModels1
ProteinId164529
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164529gene_5181Tribonema minus UTEX_B_3156 geneContig_32 237044..241241 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164529Trimin1|164529|e_gw1.32.193.1Tribonema minus UTEX_B_3156 polypeptideContig_32 237044..241241 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5181_5exon_5181_5Tribonema minus UTEX_B_3156 exonContig_32 237044..237325 -
exon_5181_4exon_5181_4Tribonema minus UTEX_B_3156 exonContig_32 238115..238259 -
exon_5181_3exon_5181_3Tribonema minus UTEX_B_3156 exonContig_32 239015..239232 -
exon_5181_2exon_5181_2Tribonema minus UTEX_B_3156 exonContig_32 240104..240163 -
exon_5181_1exon_5181_1Tribonema minus UTEX_B_3156 exonContig_32 240906..241241 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5181CDS_5181Tribonema minus UTEX_B_3156 CDSContig_32 240906..241241 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5181 ID=mRNA_5181|Name=jgi.p|Trimin1|164529|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1041bp|location=Sequence derived from alignment at Contig_32:237044..241241- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AACGTGCACTGGGTCGACGTCGCGGCGATCGGCGAGCGCCTGCGCGAGCT
CGCGCCGTGGCAGCGCGTCAACCACTTCCCCGGCATGGCCGGCGTCGCGC
GCAAGGCGCGCATGGCGCAGGCGCTGGACCGCATGCGGCGCGCGTTCCCG
CTCGACTACCGCTTCTACCCACGCACGTGGGTGCTGCCGTCGGAGGCGTG
CGCGCTGCGCAGTGAGTTCGACGCCGCAGGGCGCAGCGCGCGCACGCTCA
TCGTCAAGCCCGACGCCGGCTGCCAGGGCAAGGGCATCTACCTGACGCAG
GAGCTCGACGACCGCCTGCTGTCCATGGACAGCCAGGTGGTGCAGCTGTA
CGTGCGGCGGCCGCTGCTCATCGACGGCTACAAGTTCGACTTGCGGGTGT
ACGTGCTGGTGACGTCGATACGGCCGCTGCGCGTGTACGCATTTCGCGAC
GGCCTTGCACGCCTCTGCACAAGCGCGTACGTGCGCCCCGCCGCCGCCAA
CATGGGCGACCGCTGCATGCACCTCACCAACTACGCCATCAACCGCCGCA
GCGACAACTTCGTTGCGAACGCGGACGCGGAGCGCGACGACACGGGCAGC
AAGCGCTCGCTGCGGTGGCTGCTCGAGTGGGTGGGGCAGACGCACGGCGA
GGCGCGCGCGCGGCGCATGTGGCGGCGCATGGGCCAGTGCGCCGTCAAGA
CGCTCGTGCCAGTGCTGCCGCAGCTGCACCGCGAGTACCGCGCGACGTTC
GGCGCGGACGGCTCGAGGTGTATAGAAGTTCTCGGGTTCGACTTCATGGT
GGACGAGGCGCTCAAGCCGTGGCTGATTGAAGTGAACCACCTGCCGAGCT
TCGCGACGGACTCGCCGCTCGACGCCAGCATCAAGGTGCGTCGCGCCGAA
CAGACGCCGAGATGCGTTGCATCGACAGCACCTGGGCGCACAACCCGCTG
TCCGCTGCCGCAGTGTCGTACATGTGCCAAGATGCGTTGCATAGACGAAA
CCCAGGCGCTCACTCGTATGGGTACAGAGGTATCGGTGTAG
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protein sequence of jgi.p|Trimin1|164529

>Trimin1|164529|e_gw1.32.193.1 ID=Trimin1|164529|e_gw1.32.193.1|Name=jgi.p|Trimin1|164529|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=347bp
NVHWVDVAAIGERLRELAPWQRVNHFPGMAGVARKARMAQALDRMRRAFP
LDYRFYPRTWVLPSEACALRSEFDAAGRSARTLIVKPDAGCQGKGIYLTQ
ELDDRLLSMDSQVVQLYVRRPLLIDGYKFDLRVYVLVTSIRPLRVYAFRD
GLARLCTSAYVRPAAANMGDRCMHLTNYAINRRSDNFVANADAERDDTGS
KRSLRWLLEWVGQTHGEARARRMWRRMGQCAVKTLVPVLPQLHREYRATF
GADGSRCIEVLGFDFMVDEALKPWLIEVNHLPSFATDSPLDASIKVRRAE
QTPRCVASTAPGRTTRCPLPQCRTCAKMRCIDETQALTRMGTEVSV*
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mRNA from alignment at Contig_32:237044..241241-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5181 ID=mRNA_5181|Name=jgi.p|Trimin1|164529|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4198bp|location=Sequence derived from alignment at Contig_32:237044..241241- (Tribonema minus UTEX_B_3156 )
AACGTGCACTGGGTCGACGTCGCGGCGATCGGCGAGCGCCTGCGCGAGCT CGCGCCGTGGCAGCGCGTCAACCACTTCCCCGGCATGGCCGGCGTCGCGC GCAAGGCGCGCATGGCGCAGGCGCTGGACCGCATGCGGCGCGCGTTCCCG CTCGACTACCGCTTCTACCCACGCACGTGGGTGCTGCCGTCGGAGGCGTG CGCGCTGCGCAGTGAGTTCGACGCCGCAGGGCGCAGCGCGCGCACGCTCA TCGTCAAGCCCGACGCCGGCTGCCAGGGCAAGGGCATCTACCTGACGCAG GAGCTCGACGACCGCCTGCTGTCCATGGACAGCCAGGTGAGCGCCCGGGA AGGGGGGCGGGGGGGGCAGGACTGTACGGGGGAGGGGGGGGGGGTGCTGA GCGTGTGGCCGGGGGGGGGGGAAGGGAGGGGGCTCTGTGTGGGAAGAGGC AGGTGAACGGGGCGGGGGCTGAGCGGGGAGAAGCTGAGGGACGGGCGGGG GGGGGGTGAGCGTGTGGCGAAGGGAGGGGGGAGGGGAGGGGAGGGGAGGA CTCTGAGCGAGGCGAGGCAGGGGAAGGGGGGGGGGGGGGGAGGGGGGCTG AGCGCTGCTGCTCTATCTGAAGCAGTGCCCTCACGTTGGTGTGCCTGATA GGAGTGTATGTGACATGTGCAGCAGAAGCGCGGGCCTTGGCATGCGTGCA TGGTGCGGACTGCGGTGCCGCATGTGTTGTGGTGGAGCGTCACTCAGTCT AATTAACGCGGCCAGCAAGGTGCGGCCAGCGAGCGCGGTTGCGCGGCCCG CCTACGCTGTGCCCCCCTGTACTTGCCGCAGTTGTGTACCCTGGTCGAGG CGCCACGCGCTTGCAGCAGGCTGACGCGATGCAGGCGCACGCTGTCGTGC ATGAGCGTGAGTCGACACGGATTGACAGGTACCAAGTCAACACTTGGAGT TGTGTACGCACACCCATGATCCTTGTACGCCATTCACATGTGCCCATACG CCTTGTACACATTACATTCACATGAGATGAGGATGATTGATACATACCCA TACCTCTGCGCACCCCGCGTCGTCACAGGTGGTGCAGCTGTACGTGCGGC GGCCGCTGCTCATCGACGGCTACAAGTTCGACTTGCGGGTGCGTCCGCAC GCGCACCATGCGGTGCCGTTTTCGCACATACAGATCTTGAACCTTACCCT AGCTGAAGCCATCTACACATAGAACTCAAATTCAGGCTAGGAGCGGTCGC AGCTGGCCCAAACGTCTCTGCCACAACGCTCAGCAGCTGCAGCATCATTG CCCAATCGCAGCTATGTGACAGAAATTGAGCTGGCGCACAAGGGTAGCGC TAAAGAAATGAAGGGCAAACCCACACCGTAGCCTGACTGCGAACCCTGAT CCTGACCGTGAAACTCGTCCTGAGGCTTGAAGGTGATATTGTTTGGACCC TGTTGATAAGCACCACCTCTGAATGCTGACCGCTGCGTGCCCACAGGTCT CTATGTGCTGAGCATGTCCGCTTTGTGCATCTGTGCACCTTCAATCCTGC TTGTGAACCCCACACCTAGCCGTAGCCCCAACCCTACCCGTAGCGTTGTG CAAAGTTCTGATGATCGGCAATGCCTCCGCCGCTGCTCACCGCCACTGTG CAGGTCTACGTGCTGGTGACGTCGATACGGCCACTGCATGTATGCGTTTT GCGATGGCCTCGCGCGCCTGTGCACCTCTAACCCTAGTTGTGAACCTCAA CCCTCACCCTAACCCTGACCCGTATTGTTGTGCCAACTTTGACTGCCGCT GCCGGCCGATGCTGCGCAGGTCTACGTGCTGGTGACGTCGATACAGCCGC TGCGCGTGCACGCATTCCGCGACGGCCTCGCGCGCCTCTACTCGTAACTG AAATCCAATCATTGCCATCACCTTGAACCCAACAATCTGCTGACCGCGAT GAGCACACAACTCTTCCAATGCTGCTGACGACGCACGCACGCTGACCCTG TGCCCACAGGTGTACGTGCTGGTGACGTCGATACGGCCGCTGCGCGTGTA CGCATTTCGCGACGGCCTTGCACGCCTCTGCACAAGCGCGTACGTGCGCC CCGCCGCCGCCAACATGGGCGACCGCTGCATGCACCTCACCAACTACGCC ATCAACCGCCGCAGCGACAACTTCGTTGCGAACGCGGACGCGGAGCGCGA CGACACGGGCAGCAAGCGCTCGCTGCGGTGCGTCACCGGTTGACGATGGC GCGGCGCAGCTGCGCGTGCGCATATGTGATACTTCTATATGTATATATAC ATTTACGCCTAACCGCACCTCGTCACCTAGACCTCTACGATCTTTTGATC CGTTTCCATGTATAACGGTTTGGGTCGTGGTTCGCCGTGAATGGAGACCG TGCGCAGCGAGCACGTTTTGTTTGTGAAGGTGCGTCACCTGTTGAACTTC AGCATCTCTCGATGTTGCGCTGCGACCACCAACGACCCTTGCGCTGCAGA GCTCTGCGAGTGGGTCGCCCAGGCGCACCATCAGTGGAGCCGGTATACGT TTTCACACCTCGTGGTCTGATCAAGAATACACAGCGGTTTGCTTCAGAGC ACATGCCCTTTTCACCATATCCCAATGCAGCGTCGCTCACCCGCGCCGGG CGCCGCTGCTCACACCGCCCCCACCCCCCCATTCTCCCGCAGTCGGCTGC TCTGATCAAGAGTACACGGCAGACTGATCAAGAGTACATAGTTCATTATG GTATATTTGTCATGCATCGTCGCTCACCCGCGCCGCGCGCCGCTGCCTCA AACCCCCTCTCCCCCCCCCCCCCCCCGCGCGCGCAGGTGGCTGCTGGAGT GGGTGGGGCAGACGCACGGCGAGGCGCGCGCGCGGCGATCAAGAGTACAC CTTTTGTTGGTAAACTTTCGTCATGCATCGTCGCTCACCCGCGCAGCCAC GCAAACCCCCGCCGCCATCCCCTTTCCCGCAGGTGGCTGCTCGAGTGGGT GGGGCAGACGCACGGCGAGGCGCGCGCGCGGCGCATGTGGCGGCGCATGG GCCAGTGCGCCGTCAAGACGCTCGTGCCAGTGCTGCCGCAGCTGCACCGC GAGTACCGCGCGACGTTCGGCGCGGACGTGTACGAGAGCCACGCGCCGCG GCGTGAGTGCACACCCGCGTGCGCCGTGTATGTGTATCGTATTCACGTAG TGGGGGCGCTTGAGCCGCGGTGCAAGCGCGCGCGCGCGTGCGCCGCGCAT GCGCCCAGCTGGAAGGGGTGCTGCATTCTCACCATGCGCGCGCGGTCCGA GGCGCGTGGCCATTTTATGTGAAAGCGAACATTGCAAGAGAACATACGTA CCCCCTATCAAGGTCAGCGCTCAGTCCAGGCGCGCTGCGAATGACATTTG CCGAGGGTGAATGAGGCGTGTACGCGTGCGCAGCTCTCTGCGTCATTGGG ACGTTGCCCCTCCCTCCACACGCCCCCGCAACGCGTCCTGCCGTCTGACC CTAACCCTAAGCACCACCGCTTGCCCTCGCGCAGCACAGCCGCAGTGGCG ATCGTGCCGCTGGCGCGCACAGCTTGCGTGCTGCAGTGCTCAACAGCACA GTACACACACAGTAGTCCCACAGCACGGTACACACACAGTACAGTACAGA CACAGTACACACACGGTGCAGTACTCACCCTCCCGCCTATCGCTGCACGC CCCCACGGATGACCGTTTTTTGCAGCGCTCGTTGTGGACGCGCCGGCAGC GGACGCGCGCAGCGCCGCCGCCGACGCCCCCCGCGCAGCAAGTTCAAGTT CGGACGCTCCGCGCACGGGCAGCGCCGGCAGCTCCGAAAGCGGCAGCTGC TGCAGAGAGGGGGGGGAGAGGGGGCCGGCGTGGGGGGAGGGTGGGGGCGA CCTCCCCCCCGTGGAGGGCTCGAGGTGTATAGAAGTTCTCGGGTTCGACT TCATGGTGGACGAGGCGCTCAAGCCGTGGCTGATTGAAGTGAACCACCTG CCGAGCTTCGCGACGGACTCGCCGCTCGACGCCAGCATCAAGGTGCGTCG CGCCGAACAGACGCCGAGATGCGTTGCATCGACAGCACCTGGGCGCACAA CCCGCTGTCCGCTGCCGCAGTGTCGTACATGTGCCAAGATGCGTTGCATA GACGAAACCCAGGCGCTCACTCGTATGGGTACAGAGGTATCGGTGTAG
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Coding sequence (CDS) from alignment at Contig_32:237044..241241-

>mRNA_5181 ID=mRNA_5181|Name=jgi.p|Trimin1|164529|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1041bp|location=Sequence derived from alignment at Contig_32:237044..241241- (Tribonema minus UTEX_B_3156 )
AACGTGCACTGGGTCGACGTCGCGGCGATCGGCGAGCGCCTGCGCGAGCT
CGCGCCGTGGCAGCGCGTCAACCACTTCCCCGGCATGGCCGGCGTCGCGC
GCAAGGCGCGCATGGCGCAGGCGCTGGACCGCATGCGGCGCGCGTTCCCG
CTCGACTACCGCTTCTACCCACGCACGTGGGTGCTGCCGTCGGAGGCGTG
CGCGCTGCGCAGTGAGTTCGACGCCGCAGGGCGCAGCGCGCGCACGCTCA
TCGTCAAGCCCGACGCCGGCTGCCAGGGCAAGGGCATCTACCTGACGCAG
GAGCTCGACGACCGCCTGCTGTCCATGGACAGCCAGGTGGTGCAGCTGTA
CGTGCGGCGGCCGCTGCTCATCGACGGCTACAAGTTCGACTTGCGGGTGT
ACGTGCTGGTGACGTCGATACGGCCGCTGCGCGTGTACGCATTTCGCGAC
GGCCTTGCACGCCTCTGCACAAGCGCGTACGTGCGCCCCGCCGCCGCCAA
CATGGGCGACCGCTGCATGCACCTCACCAACTACGCCATCAACCGCCGCA
GCGACAACTTCGTTGCGAACGCGGACGCGGAGCGCGACGACACGGGCAGC
AAGCGCTCGCTGCGGTGGCTGCTCGAGTGGGTGGGGCAGACGCACGGCGA
GGCGCGCGCGCGGCGCATGTGGCGGCGCATGGGCCAGTGCGCCGTCAAGA
CGCTCGTGCCAGTGCTGCCGCAGCTGCACCGCGAGTACCGCGCGACGTTC
GGCGCGGACGGCTCGAGGTGTATAGAAGTTCTCGGGTTCGACTTCATGGT
GGACGAGGCGCTCAAGCCGTGGCTGATTGAAGTGAACCACCTGCCGAGCT
TCGCGACGGACTCGCCGCTCGACGCCAGCATCAAGGTGCGTCGCGCCGAA
CAGACGCCGAGATGCGTTGCATCGACAGCACCTGGGCGCACAACCCGCTG
TCCGCTGCCGCAGTGTCGTACATGTGCCAAGATGCGTTGCATAGACGAAA
CCCAGGCGCTCACTCGTATGGGTACAGAGGTATCGGTGTAG
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