mRNA_5164 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348825
Unique Name	mRNA_5164
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348825 vs. uniprot
Match: A0A835Z4Z7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Z7_9STRA)

HSP 1 Score: 815 bits (2104), Expect = 8.670e-284
Identity = 812/812 (100.00%), Postives = 812/812 (100.00%), Query Frame = 1

Query:    1 MAEPVAAAPAVAPASADAGAKVNGTTFAKSWECLSTAGKAVFSIDRCAVFRGKKQVILRVPICTATKKSTRTVRSHGYAMMDLDVYMNSSQQKQCTLLQPRRMTGSVSVIAKALNVNNTRLFWQLSWICAERSSLTRQLGAVVPPQAPAEPPMMPVHCLLMSNTPASQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRYITAKRKCEAADAALATAVAHAAAQLEADAAGGKRQRCDSXXXXXXXXXXXXXXLLSAMAKTEGIDLRDLDVARVAAAAVARAQHSVLAARGSLLQLQLGGCRKGVGELEGAAPRMELSLLCSGVAALVETLQALSRDMRRTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPIFERADDSDADTPAASGLLCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGWRAAAAALAAPLPDLNGGHADVGALAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHAQQVDAATDPAAAWRSAHVWPTGFSEQPVAATTSAAAAADWRIAAVRELASPLPILQSATATKVTDGSEQPAAVACAMRIGSAQYVTGLSDASSGAVAXXXXXXXXXXXSLQTVAALDRQWGHEQQHSSTRTRAMQPHGTNKAVAAAEVAQAV 2436
            MAEPVAAAPAVAPASADAGAKVNGTTFAKSWECLSTAGKAVFSIDRCAVFRGKKQVILRVPICTATKKSTRTVRSHGYAMMDLDVYMNSSQQKQCTLLQPRRMTGSVSVIAKALNVNNTRLFWQLSWICAERSSLTRQLGAVVPPQAPAEPPMMPVHCLLMSNTPASQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRYITAKRKCEAADAALATAVAHAAAQLEADAAGGKRQRCDSXXXXXXXXXXXXXXLLSAMAKTEGIDLRDLDVARVAAAAVARAQHSVLAARGSLLQLQLGGCRKGVGELEGAAPRMELSLLCSGVAALVETLQALSRDMRRTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPIFERADDSDADTPAASGLLCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGWRAAAAALAAPLPDLNGGHADVGALAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHAQQVDAATDPAAAWRSAHVWPTGFSEQPVAATTSAAAAADWRIAAVRELASPLPILQSATATKVTDGSEQPAAVACAMRIGSAQYVTGLSDASSGAVAXXXXXXXXXXXSLQTVAALDRQWGHEQQHSSTRTRAMQPHGTNKAVAAAEVAQAV
Sbjct:    1 MAEPVAAAPAVAPASADAGAKVNGTTFAKSWECLSTAGKAVFSIDRCAVFRGKKQVILRVPICTATKKSTRTVRSHGYAMMDLDVYMNSSQQKQCTLLQPRRMTGSVSVIAKALNVNNTRLFWQLSWICAERSSLTRQLGAVVPPQAPAEPPMMPVHCLLMSNTPASQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRYITAKRKCEAADAALATAVAHAAAQLEADAAGGKRQRCDSXXXXXXXXXXXXXXLLSAMAKTEGIDLRDLDVARVAAAAVARAQHSVLAARGSLLQLQLGGCRKGVGELEGAAPRMELSLLCSGVAALVETLQALSRDMRRTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPIFERADDSDADTPAASGLLCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGWRAAAAALAAPLPDLNGGHADVGALAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHAQQVDAATDPAAAWRSAHVWPTGFSEQPVAATTSAAAAADWRIAAVRELASPLPILQSATATKVTDGSEQPAAVACAMRIGSAQYVTGLSDASSGAVAXXXXXXXXXXXSLQTVAALDRQWGHEQQHSSTRTRAMQPHGTNKAVAAAEVAQAV 812

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348825 vs. uniprot

BLAST of jgi.p|Trimin1|348825 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z4Z7_9STRA	8.670e-284	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_32	contig	Contig_32:90831..97202 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348825\|estExt_Genemark1.C_Ctg_320013
Hectar predicted targeting category	other localisation
TranscriptId	349147
Track	FilteredModels1
ProteinId	348825

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348825	gene_5164	Tribonema minus UTEX_B_3156	gene	Contig_32 90831..97202 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348825	Trimin1\|348825\|estExt_Genemark1.C_Ctg_320013	Tribonema minus UTEX_B_3156	polypeptide	Contig_32 90833..97202 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5164_9	exon_5164_9	Tribonema minus UTEX_B_3156	exon	Contig_32 90831..91065 -
exon_5164_8	exon_5164_8	Tribonema minus UTEX_B_3156	exon	Contig_32 91511..92342 -
exon_5164_7	exon_5164_7	Tribonema minus UTEX_B_3156	exon	Contig_32 92394..92432 -
exon_5164_6	exon_5164_6	Tribonema minus UTEX_B_3156	exon	Contig_32 93241..93346 -
exon_5164_5	exon_5164_5	Tribonema minus UTEX_B_3156	exon	Contig_32 93415..93549 -
exon_5164_4	exon_5164_4	Tribonema minus UTEX_B_3156	exon	Contig_32 94462..94670 -
exon_5164_3	exon_5164_3	Tribonema minus UTEX_B_3156	exon	Contig_32 95870..96303 -
exon_5164_2	exon_5164_2	Tribonema minus UTEX_B_3156	exon	Contig_32 96364..96557 -
exon_5164_1	exon_5164_1	Tribonema minus UTEX_B_3156	exon	Contig_32 96826..97202 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_5164	UTR3_5164	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_32 90831..90832 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5164	CDS_5164	Tribonema minus UTEX_B_3156	CDS	Contig_32 96826..97202 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_32:90831..97202-
coding sequence from alignment at Contig_32:90831..97202-

spliced messenger RNA

>mRNA_5164 ID=mRNA_5164|Name=jgi.p|Trimin1|348825|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2561bp|location=Sequence derived from alignment at Contig_32:90831..97202- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGAGCCTGTTGCCGCAGCACCAGCCGTGGCGCCTGCAAGTGCAGA
TGCCGGCGCCAAAGTCAATGGCACCACCTTCGCAAAGAGCTGGGAGTGCC
TCAGCACCGCCGGCAAGGCCGTCTTCTCGATCGACAGATGCGCCGTTTTC
CGCGGCAAGAAGCAGGTCATCCTGAGGGTTCCCATATGCACGGCGACGAA
GAAAAGCACCAGGACCGTGAGGTCTCATGGCTATGCGATGATGGACCTCG
ACGTCTACATGAACTCAAGCCAGCAGAAGCAGTGCACTCTGCTGCAGCCC
AGAAGGATGACAGGCTCGGTGAGCGTCATTGCCAAGGCTCTCAACGTCAA
CAACACGCGCTTGTTCTGGCAGCTTTCGTGGATCTGCGCGGAGCGCAGCA
GCCTGACCCGACAGCTCGGGGCCGTTGTGCCGCCGCAGGCGCCGGCAGAG
CCCCCGATGATGCCTGTCCACTGCCTCCTCATGTCCAATACGCCTGCGTC
GCAGCAGCCCAGCAGCACTGCTGTAGCAGCACCACCAGCAGCAGCACCAC
CAGCAGCAGCAGCACCAGCAGGCGCCAGTGCCAGGCGAGCTTCACGCGCC
GCTGCAAAGGCGGCGGCGGCGGTGCTGAAACGAGCAGCACCGGCGCCGCG
GCCGGTCGCACCAGCAGCAGCGGCGGCGGCGGCGGCAGCGCGGCCCCCGC
CGCCGTCGCGGTACATCACCGCCAAGCGCAAGTGCGAGGCGGCGGACGCG
GCGCTGGCGACGGCGGTCGCGCACGCGGCGGCGCAGCTAGAGGCGGACGC
AGCCGGCGGCAAGCGGCAGCGCTGCGACAGCGACGGCGGCGGCAGCAGCA
GCGCGGACAATGCGGCGCTGTTGCTGCTGAGCGCCATGGCGAAGACGGAG
GGCATTGACCTGCGGGACCTGGACGTGGCGCGCGTGGCGGCGGCGGCGGT
GGCGCGCGCGCAGCACAGCGTGCTGGCGGCGCGCGGCTCGCTGCTGCAGC
TGCAGCTCGGCGGCTGCCGCAAGGGCGTCGGCGAGCTGGAGGGCGCAGCA
CCGCGCATGGAGCTGAGCCTGCTGTGCTCCGGCGTCGCGGCGCTGGTGGA
GACGCTCCAGGCACTGTCCAGGGACATGCGCAGGACGTGCGGCGGCGGCG
ACGGCGCTGGCGGTGGCGGCGGCGGCAGCAGCGGCGCAGGCAGTGCGCCG
TGGCAGAGCAGCAGGGAAAGGCGGGGGCCGCCGATCTGCATCGCCGGCGG
CGCCACGCTGGTGGCCAAGACGCAGTTTGCTGCGGCGCGTGCAGCAGCAG
CAGCAGCAGCCGCAGCACACCTATTGTTCCTGCTGCGCGTCTTCACCTTC
AGCCACGCAGCAGCGGCGGCGACGGCGCAGCAGCAGGCGGGCGCCGGGGG
CGGCGCGGAGGAGGACATCATTTGGGTTGACGAAGAGGAGGAAATGCCGA
TATTTGAGAGAGCCGATGACAGCGACGCAGACACGCCGGCCGCGTCAGGG
CTCCTCTGCTCAGGCCTGGCCGCCGCTGCCGCCGCCAGCGCCGCCGCCGC
GCGCACTGACGTCATGCCCTGCGCGCCCGCAGCGGCAGCAGGGGTGGCAG
TGACGGCAGCCGCTGCTGGAGATGACACGCTCTTGGCGCCGCCGAGTGCA
GCGCTGTCGCCGCTTGCTGCACAAGCGGCGGGTGCTGCTTTCTCGGCTGC
TGGTTTCGCTGCTGCTGCTGGTGCTGCTGCCGGAGGCGGCACCGCCGCTG
ATACTGCTGCCGGTGGCACCACCGCTAGCGCTGCTGCTCCCGCTCCCGGG
TGGCGTGCGGCGGCCGCCGCGCTCGCAGCGCCCCTGCCCGACTTGAACGG
CGGTCACGCCGACGTTGGCGCGCTGGCGGCGACTACCGGGGGCAGCAGCG
AGCAACCTATGGCGGCGGCTGTGGCTGCTGCTGTCGCTGCTGCTGCTGCT
GCTGCTGCTGCATCCTGCTGCAGCCATGCTCAGCAGGTTGATGCCGCGAC
CGATCCCGCAGCTGCCTGGCGCAGCGCACACGTCTGGCCCACTGGCTTTA
GCGAGCAACCTGTGGCTGCCACCACATCTGCTGCGGCTGCTGCTGATTGG
CGGATCGCCGCCGTCCGCGAGCTCGCATCACCCCTACCCATCTTGCAGAG
CGCGACGGCAACAAAAGTCACGGACGGCAGCGAGCAACCTGCTGCTGTTG
CTTGTGCAATGCGCATCGGCAGTGCTCAGTACGTGACGGGCTTGAGTGAT
GCCAGCAGCGGCGCCGTTGCTGCAACTGCTGCCGGTGGCGCCGCCGCTGC
TGCTTCTTTGCAGACGGTCGCCGCTCTGGATCGGCAGTGGGGACACGAGC
AGCAGCACAGCAGCACACGGACGAGGGCCATGCAGCCGCACGGCACCAAT
AAAGCGGTGGCGGCAGCAGAGGTGGCGCAGGCAGTGGTGGCAGTAGCGGC
AGAGGCAGCAGCGATGCTGTCAGCACGGGTGATAGTCATGGCGGTGATGG
CAGCGAGGGGTGGCAGCCACGCCAGAACAAGCAGCAGCCCGTGGTGGTGG
CTTATCTAGCG

protein sequence of jgi.p|Trimin1|348825

>Trimin1|348825|estExt_Genemark1.C_Ctg_320013 ID=Trimin1|348825|estExt_Genemark1.C_Ctg_320013|Name=jgi.p|Trimin1|348825|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=853bp
MAEPVAAAPAVAPASADAGAKVNGTTFAKSWECLSTAGKAVFSIDRCAVF
RGKKQVILRVPICTATKKSTRTVRSHGYAMMDLDVYMNSSQQKQCTLLQP
RRMTGSVSVIAKALNVNNTRLFWQLSWICAERSSLTRQLGAVVPPQAPAE
PPMMPVHCLLMSNTPASQQPSSTAVAAPPAAAPPAAAAPAGASARRASRA
AAKAAAAVLKRAAPAPRPVAPAAAAAAAAARPPPPSRYITAKRKCEAADA
ALATAVAHAAAQLEADAAGGKRQRCDSDGGGSSSADNAALLLLSAMAKTE
GIDLRDLDVARVAAAAVARAQHSVLAARGSLLQLQLGGCRKGVGELEGAA
PRMELSLLCSGVAALVETLQALSRDMRRTCGGGDGAGGGGGGSSGAGSAP
WQSSRERRGPPICIAGGATLVAKTQFAAARAAAAAAAAAHLLFLLRVFTF
SHAAAAATAQQQAGAGGGAEEDIIWVDEEEEMPIFERADDSDADTPAASG
LLCSGLAAAAAASAAAARTDVMPCAPAAAAGVAVTAAAAGDDTLLAPPSA
ALSPLAAQAAGAAFSAAGFAAAAGAAAGGGTAADTAAGGTTASAAAPAPG
WRAAAAALAAPLPDLNGGHADVGALAATTGGSSEQPMAAAVAAAVAAAAA
AAAASCCSHAQQVDAATDPAAAWRSAHVWPTGFSEQPVAATTSAAAAADW
RIAAVRELASPLPILQSATATKVTDGSEQPAAVACAMRIGSAQYVTGLSD
ASSGAVAATAAGGAAAAASLQTVAALDRQWGHEQQHSSTRTRAMQPHGTN
KAVAAAEVAQAVVAVAAEAAAMLSARVIVMAVMAARGGSHARTSSSPWWW
LI*

mRNA from alignment at Contig_32:90831..97202-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5164 ID=mRNA_5164|Name=jgi.p|Trimin1|348825|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6372bp|location=Sequence derived from alignment at Contig_32:90831..97202- (Tribonema minus UTEX_B_3156 )
ATGGCGGAGCCTGTTGCCGCAGCACCAGCCGTGGCGCCTGCAAGTGCAGA
TGCCGGCGCCAAAGTCAATGGCACCACCTTCGCAAAGAGCTGGGAGTGCC
TCAGCACCGCCGGCAAGGCCGTCTTCTCGATCGACAGATGCGCCGTTTTC
CGCGGCAAGAAGCAGGTCATCCTGAGGGTTCCCATATGCACGGCGACGAA
GAAAAGCACCAGGACCGTGAGGTCTCATGGCTATGCGATGATGGACCTCG
ACGTCTACATGAACTCAAGCCAGCAGAAGCAGTGCACTCTGCTGCAGCCC
AGAAGGATGACAGGCTCGGTGAGCGTCATTGCCAAGGCTCTCAACGTCAA
CAACACGCGCTTGTTCTGGCAGCTTTCGTGCGTGTGGCAGTCGGACTGGG
ACAATGGCACCGGCAGGCAAGTGGCTCACTCGCCAGACAGCTCCAAATTT
GGCTGTGCCCGCAACTGCTTATTCGCGCTGAGCACTGCCTCAGCTCTGTC
TTGCAACGTTCCCTCGGCGACGACTGACGTTTTGACATGGCACCAACGTG
CTGCATGTTGCAAGGTTCACATAATCAGCAGACCGTGAGCTACAAACTTA
CTCATACTTTGCCGTCGGCCCACCGCCCCCGTTTTTGTTGCGCAGGTGGA
TCTGCGCGGAGCGCAGCAGCCTGACCCGACAGCTCGGGGCCGTTGTGCCG
CCGCAGGCGCCGGCAGAGCCCCCGATGATGCCTGTCCACTGCCTCCTCAT
GTCCAATACGCCTGCGTCGCAGCAGCCCAGCAGCACTGCTGTAGCAGCAC
CACCAGCAGCAGCACCACCAGCAGCAGCAGCACCAGCAGGTGCGGTAGCT
GCGCCATCAGCACCGCTTAGAGCTTCTAGAAGAACCGGCCAAAGCGCAGG
CGCCAGTGCCAGGCGAGCTTCACGCGCCGCTGCAAAGGCGGCGGCGGCGG
TGCTGAAACGAGCAGCACCGGCGCCGCGGCCGGTCGCACCAGCAGCAGCG
GCGGCGGCGGCGGCAGCGCGGCCCCCGCCGCCGTCGCGGTACATCACCGC
CAAGCGCAAGTGCGAGGCGGCGGACGCGGCGCTGGCGACGGCGGTCGCGC
ACGCGGCGGCGCAGCTAGAGGCGGACGCAGCCGGCGGCAAGCGGCAGCGC
TGCGACAGCGACGGCGGCGGCAGCAGCAGCGCGGACAATGCGGCGCTGTT
GCTGCTGAGCGCCATGGCGAAGACGGAGGGCATTGACCTGCGGGACCTGG
ACGTGGCGCGCGTGGCGGCGGCGGCGGTGGCGCGCGCGCAGCACAGCGTG
CTGGCGGCGCGCGGCTCGCTGCTGCAGCTGCAGGTGAGCGCTGCCATTGC
TGCGTAAACACTACGTCTCTCAGCGGTCGCCGCGCTCCAGAGCAGAACAC
ACAGGCAGCAAGACCGTTGATGCCGGTTCAGCTATGCGCTTGCGTAGCTG
CAGCCTGCGTCGGAACTAGTACCCCCATGGGGGGGGCATGCAGGGGCAGC
AGTCGCAGGTCAGCCACTGCTGTGGGAGAATGATTCTTGGCGATGGCTTG
AAGTTGGCGATGGCAATGCAGGTGCCACCCATTTATTGTCGTCGCAATCG
CTGCTGTGCACTGCAGCCGCTGCGCTGCGTAATGTGGCAGAAGCACTAGT
GGCACATGTGACTCTCCGCAGCTGCAGTCGAAATTGTCCGTGGCTCTTCA
TCATGCCTGTCTGAGCCCAGCTCCGCGGCTGCCAGGCCAGCCACTGCTCG
GCAAGAGAGGTCTGGCAATGAGTCATAGTCGGCGCTCGTGGTGCTTCTTC
TATTCCCACTTTGGTGTCGTACCAAATGCTGCAGTGCGCGGCAGCCGCTG
CGGGCCACGAGGCGGCGGAAGCACTGCACATGTAACTGCAGCGCTGCGGG
CCACGAGGCGGCGGAAGCACTGCACATGTGACTCTCCGCAGCGCTGCAGT
TGCGCATGTCCGCAGCACTGCATCATGATGCTTGAACACATGCAGCTCTT
CGGGCGCCTGCAGATTGGATGCTGAAGCAGCTGTTGCACGCGCCAGCATG
CTGCTGATTTCCAGAGGCTCAGTTGCAGGCTTGGGAACAACGTCTCTTAT
TTATGGGTCCTGTTGAAGTTCGCAGGCCAGCCCGTGAACGCGTGTGACGG
TTGCAGGGCCCCATCAATGCGGAAGTCCCCTCACCACGCTACAGGATGGC
TGCTGCGACAATACGTTGCTAACGAGACGCGTCAGTGCTCCTCATGCTAC
AAAGTCGTCCTATTGATAGCGCCCACTAGTGACTAAGCGGCTGATGCGCT
GCACCATACCTACCTTAGGGACGGGATCATGGCTCAACAGCATGGCTTGC
CATCGCGCAGCTCGATGGCGGCGGGGGAGGGGGCGGGGGGGGGGCAATGC
TCCCGCGCAGGAGTGAGCCTGGCGTGCCGCTGCCAGAATTGCAGAAGTAA
CACACCATGCACTGTCAGCAACATCAGAACCCAGTACGCTTCGTCACCAC
GCATCCCGTGCCGTACGACCTCGCCGCTGCAGCTCGGCGGCTGCCGCAAG
GGCGTCGGCGAGCTGGAGGGCGCAGCACCGCGCATGGAGCTGAGCCTGCT
GTGCTCCGGCGTCGCGGCGCTGGTGGAGACGCTCCAGGCACTGTCCAGGG
ACATGCGCAGGACGTGCGGCGGCGGCGACGGCGCTGGCGGTGGCGGCGGC
GGCAGCAGCGGCGCAGGCAGTGCGCCGTGGCAGAGCAGCAGGTGAGCGGT
GGCAGCGAGGAATTGGTGTTGTCGCGACTGGAACACGTGTGTAGTGCTGT
GGTAGAGTGCTGCACCTCAGGTCTATGAGCGTTGGGTTGATCGCTGCTGC
TGCTGCTGCTGCGCGTCATGCGCCGACTACTGGATGAAATTGGGCCAGGG
GGCAGCTTCAGGGGACACTTTATATGAGCTAGTGGCGCAGCAGCAAAAAG
TGCTACAGCAGCACCAGCATCTGCGTAAAGGGTGGTCGCCCTGCCGCTCG
GCACATGCCGTCTGCGCTGCCGGCGGCTCGCTGCCGCAGTGGCAAGTTCA
GCACTGCTGACGCTGAGCTCGGACCATCAGCCATTGCCGTTGACTTGCAG
GCGCTGGTCGTTCAGCACCTGCTGAGTGGCAGGCGGGTGTCGGCGATGGG
CTGAGCGCTGGCGCTTTCGTCTGCAGCGCTCAGCGCGCGCATCGCAACTG
CTCTGACTGTTGCGGCAGTGACCTCGTACGCGCGGTGCCGCAGAGGTGTG
TCTGGCCACCTTGCACGACAGCAGGCGCGCAGTGGGCGGTCGCGCACGGC
GCGCGCCGGTAGTGTCAGTTCACTGCCCGCTGAGGGTGCAATTTCACGTT
GTTAGTTGCGCGTTTCCTACGCAAGTTGGCTGTGCCCAGAACCGGGTTGA
TTGCTATGCGATGGCACCAACGACTGCGTGCAGATCACTCACACGCACGC
GCAGCCTGCCATTCCGATAGGCCGCGTACGCGCCGCCGCGTGCGTCCTTT
TATGCTGATAGGCCACGTACAGGCCACCGCGCACACTGGCACGTCACCGA
TCGCTTCCTTAGCAACCGCATAGGCGGCACGCTAATTGAACGCATCGGAC
TGGCTCGCATGATTCGCGAGCTGCTGCCGCTGCTGTCGTCGCATGTGCCA
AAGGGAAAGGCGGGGGCCGCCGATCTGCATCGCCGGCGGCGCCACGCTGG
TGGCCAAGACGCAGTTTGCTGCGGCGCGTGCAGCAGCAGCAGCAGCAGCC
GCAGCACACCTATTGTTCCTGCTGCGCGTCTTCACCTTGTTTGCCTTGGA
GAGACGCTTCTGCAGCGCCCCGCACTCACAGCGCACGCGCCGTCCGCGCA
TTGCAGCAGCCACGCAGCAGCGGCGGCGACGGCGCAGCAGCAGGCGGGCG
CCGGGGGCGGCGCGGAGGAGGACATCATTTGGGTTGACGAAGAGGAGGAA
ATGCCGATATTTGTGAGTCATTATGAGGACCGTGCCATGAAGTGGATGGT
GTCACATCTAGCGGGGTGCAAAGCGCGGCATCTGCACGACTGTCATATGA
TCAGTTGTCATGTGGCCATCAGCGGCCACTGTTGCTCAAGCAGGCGTGGT
CGATGCTGGCGCGGAGTGCACATGGTCAATCAGCAGCGCGACAGTGCTCA
GGGTACAGCGCCACATTATTGCTGCAAGCCAATAGCATCGCAATGTGTTG
GCGCGGTGTGGCATTGACTGTCACGCGCAGAGCGCCCGCCAAGTGCCTGT
GCAGCTTTCAAGCAAGCGTAGTCCTCTATCATTGTGCATGCAGTGTGGTC
GAGCTGAATTGGCGTTACAGGGCCAACAAGCACTTGGCGCACTGGTGGCT
TGAAGGTTGCTGGGAGCGTCTATAGTATGAGCAGGTCATGTCTTTCAAAT
CGCATTGTGAAGCCGAAATGGCATCTGGTGTTGCAAGTTGGGGTGACAGT
TGCGCTCATCTGGCACTTCCTCTTTCTGCAGCTACCTACCCCCAGCACCG
CATTTAATACTTTGAATCAGCTCAAGTCAGTAACGCCACCACCGCTGTGC
CGCTGCTGGGTGCTGCTTGTAACTTGGCGGGGGGGGCAGGGAATGGCACA
TGCCCCCCCCTCCCCCCGCCAATGCCCCCTTTTCGATGCTCTGGTGGCAC
AGACAGCCATATTGCGCTACCATACCGAACATGCTGCCTTTGAAACGCTC
AAGGTGAGCCTCTCGTGGCGGCTCGCAAGGAGCTGACATCGCCCGCCCGC
CGCCGCGCCCCCCCGAACAGGAGAGAGCCGATGACAGCGACGCAGACACG
CCGGCCGCGGTACCAGACCGCCATTGCGCTGCCGCTTGCGCCGCGCCGAC
GGCTGCGCAGTCAGGGCTCCTCTGCTCAGGCCTGGCCGCCGCTGCCGCCG
CCAGCGCCGCCGCCGCGCGCACTGACGTCATGCCCTGCGCGCCCGCAGCG
GCAGCAGGGGTGGCAGTGACGGCAGCCGCTGCTGGAGATGACACGCTCTT
GGCGCCGCCGAGTGCAGCGCTGTCGCCGCTTGCTGCACAAGCGGCGGGTG
CTGCTTTCTCGGCTGCTGGTTTCGCTGCTGCTGCTGGTGCTGCTGCCGGA
GGCGGCACCGCCGCTGATACTGCTGCCGGTGGCACCACCGCTAGCGCTGC
TGCTCCCGCTCCCGGGTGGCGTGCGGCGGCCGCCGCGCTCGCAGCGCCCC
TGCCCGACTTGAACGGCGGTCACGCCGACGTTGGCGCGCTGGCGGCGACT
ACCGGGGGCAGCAGCGAGCAACCTATGGCGGCGGCTGTGGCTGCTGCTGT
CGCTGCTGCTGCTGCTGCTGCTGCTGCATCCTGCTGCAGCCATGCTCAGC
AGGTTGATGCCGCGACCGATCCCGCAGCTGCCTGGCGCAGCGCACACGTC
TGGCCCACTGGCTTTAGCGAGCAACCTGTGGCTGCCACCACATCTGCTGC
GGCTGCTGCTGATTGGCGGATCGCCGCCGTCCGCGAGCTCGCATCACCCC
TACCCATCTTGCAGAGCGCGACGGCAACAAAAGTCACGGACGGCAGCGAG
CAACCTGCTGCTGTTGCTTGTGCAATGCGCATCGGCAGTGCTCAGTACGT
GACGGGCTTGAGTGATGCCAGCAGCGGCGCCGTTGCTGCAACTGCTGCCG
GTGGCGCCGCCGCTGCTGCTTCTTTGCAGACGGTCGCCGCTCGTGAGCTC
GCAGCACTGTTGCCCATCGTGACTGGCAGTTGCGCAAGTATCAGCGCGCT
GGCAGTGAGCACTGGAGGCAGCTGCCAGCCATCTGCTGACGCTGCCGCCG
CTGCTGATGCAGCGCACAGTGGCACTGCGCAGCACGTTCATACCATGATC
GATGCATTGCCCACAGCAACTTGACAGTTTGCATCGGCGTCAGCGCATGG
GCAGCGGGCGCTCGGAACGCCAGCAAGCAACGTGACTTCGCCCTCAACCC
TCCGAGTCCTCACGCTACTGCAGCAGATGCTGCTGGTGCTGCTGCTGCTG
CCAACAATCTCCAAGGTTGCGCGCCTGCATCAGGCTGATGCTGATATGCG
GTAGGCAAAAATCATGAGCGGCAGCGGGCAAGCAGCCACCGCTACAGCTG
CTGAGTTGTAACAACATCAACAGCCTGGGCCCTGCAGTGGATCGGCAGTG
GGGACACGAGCAGCAGCACAGCAGCACACGGACGAGGGCCATGCAGCCGC
ACGGCACCAATAAAGCGGTGGCGGCAGCAGAGGTGGCGCAGGCAGTGGTG
GCAGTAGCGGCAGAGGCAGCAGCGATGCTGTCAGCACGGGTGATAGTCAT
GGCGGTGATGGCAGCGAGGGGTGGCAGCCACGCCAGAACAAGCAGCAGCC
CGTGGTGGTGGCTTATCTAGCG

Coding sequence (CDS) from alignment at Contig_32:90831..97202-

>mRNA_5164 ID=mRNA_5164|Name=jgi.p|Trimin1|348825|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2559bp|location=Sequence derived from alignment at Contig_32:90831..97202- (Tribonema minus UTEX_B_3156 )
ATGGCGGAGCCTGTTGCCGCAGCACCAGCCGTGGCGCCTGCAAGTGCAGA
TGCCGGCGCCAAAGTCAATGGCACCACCTTCGCAAAGAGCTGGGAGTGCC
TCAGCACCGCCGGCAAGGCCGTCTTCTCGATCGACAGATGCGCCGTTTTC
CGCGGCAAGAAGCAGGTCATCCTGAGGGTTCCCATATGCACGGCGACGAA
GAAAAGCACCAGGACCGTGAGGTCTCATGGCTATGCGATGATGGACCTCG
ACGTCTACATGAACTCAAGCCAGCAGAAGCAGTGCACTCTGCTGCAGCCC
AGAAGGATGACAGGCTCGGTGAGCGTCATTGCCAAGGCTCTCAACGTCAA
CAACACGCGCTTGTTCTGGCAGCTTTCGTGGATCTGCGCGGAGCGCAGCA
GCCTGACCCGACAGCTCGGGGCCGTTGTGCCGCCGCAGGCGCCGGCAGAG
CCCCCGATGATGCCTGTCCACTGCCTCCTCATGTCCAATACGCCTGCGTC
GCAGCAGCCCAGCAGCACTGCTGTAGCAGCACCACCAGCAGCAGCACCAC
CAGCAGCAGCAGCACCAGCAGGCGCCAGTGCCAGGCGAGCTTCACGCGCC
GCTGCAAAGGCGGCGGCGGCGGTGCTGAAACGAGCAGCACCGGCGCCGCG
GCCGGTCGCACCAGCAGCAGCGGCGGCGGCGGCGGCAGCGCGGCCCCCGC
CGCCGTCGCGGTACATCACCGCCAAGCGCAAGTGCGAGGCGGCGGACGCG
GCGCTGGCGACGGCGGTCGCGCACGCGGCGGCGCAGCTAGAGGCGGACGC
AGCCGGCGGCAAGCGGCAGCGCTGCGACAGCGACGGCGGCGGCAGCAGCA
GCGCGGACAATGCGGCGCTGTTGCTGCTGAGCGCCATGGCGAAGACGGAG
GGCATTGACCTGCGGGACCTGGACGTGGCGCGCGTGGCGGCGGCGGCGGT
GGCGCGCGCGCAGCACAGCGTGCTGGCGGCGCGCGGCTCGCTGCTGCAGC
TGCAGCTCGGCGGCTGCCGCAAGGGCGTCGGCGAGCTGGAGGGCGCAGCA
CCGCGCATGGAGCTGAGCCTGCTGTGCTCCGGCGTCGCGGCGCTGGTGGA
GACGCTCCAGGCACTGTCCAGGGACATGCGCAGGACGTGCGGCGGCGGCG
ACGGCGCTGGCGGTGGCGGCGGCGGCAGCAGCGGCGCAGGCAGTGCGCCG
TGGCAGAGCAGCAGGGAAAGGCGGGGGCCGCCGATCTGCATCGCCGGCGG
CGCCACGCTGGTGGCCAAGACGCAGTTTGCTGCGGCGCGTGCAGCAGCAG
CAGCAGCAGCCGCAGCACACCTATTGTTCCTGCTGCGCGTCTTCACCTTC
AGCCACGCAGCAGCGGCGGCGACGGCGCAGCAGCAGGCGGGCGCCGGGGG
CGGCGCGGAGGAGGACATCATTTGGGTTGACGAAGAGGAGGAAATGCCGA
TATTTGAGAGAGCCGATGACAGCGACGCAGACACGCCGGCCGCGTCAGGG
CTCCTCTGCTCAGGCCTGGCCGCCGCTGCCGCCGCCAGCGCCGCCGCCGC
GCGCACTGACGTCATGCCCTGCGCGCCCGCAGCGGCAGCAGGGGTGGCAG
TGACGGCAGCCGCTGCTGGAGATGACACGCTCTTGGCGCCGCCGAGTGCA
GCGCTGTCGCCGCTTGCTGCACAAGCGGCGGGTGCTGCTTTCTCGGCTGC
TGGTTTCGCTGCTGCTGCTGGTGCTGCTGCCGGAGGCGGCACCGCCGCTG
ATACTGCTGCCGGTGGCACCACCGCTAGCGCTGCTGCTCCCGCTCCCGGG
TGGCGTGCGGCGGCCGCCGCGCTCGCAGCGCCCCTGCCCGACTTGAACGG
CGGTCACGCCGACGTTGGCGCGCTGGCGGCGACTACCGGGGGCAGCAGCG
AGCAACCTATGGCGGCGGCTGTGGCTGCTGCTGTCGCTGCTGCTGCTGCT
GCTGCTGCTGCATCCTGCTGCAGCCATGCTCAGCAGGTTGATGCCGCGAC
CGATCCCGCAGCTGCCTGGCGCAGCGCACACGTCTGGCCCACTGGCTTTA
GCGAGCAACCTGTGGCTGCCACCACATCTGCTGCGGCTGCTGCTGATTGG
CGGATCGCCGCCGTCCGCGAGCTCGCATCACCCCTACCCATCTTGCAGAG
CGCGACGGCAACAAAAGTCACGGACGGCAGCGAGCAACCTGCTGCTGTTG
CTTGTGCAATGCGCATCGGCAGTGCTCAGTACGTGACGGGCTTGAGTGAT
GCCAGCAGCGGCGCCGTTGCTGCAACTGCTGCCGGTGGCGCCGCCGCTGC
TGCTTCTTTGCAGACGGTCGCCGCTCTGGATCGGCAGTGGGGACACGAGC
AGCAGCACAGCAGCACACGGACGAGGGCCATGCAGCCGCACGGCACCAAT
AAAGCGGTGGCGGCAGCAGAGGTGGCGCAGGCAGTGGTGGCAGTAGCGGC
AGAGGCAGCAGCGATGCTGTCAGCACGGGTGATAGTCATGGCGGTGATGG
CAGCGAGGGGTGGCAGCCACGCCAGAACAAGCAGCAGCCCGTGGTGGTGG
CTTATCTAG