mRNA_51 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157641
Unique NamemRNA_51
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A835YWQ7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWQ7_9STRA)

HSP 1 Score: 1683 bits (4358), Expect = 0.000e+0
Identity = 893/893 (100.00%), Postives = 893/893 (100.00%), Query Frame = 1
Query:    1 MVNVAQLQAATGAQSRYVAGLIPGSVQYLYIRARNTGTGEYTVLNATGAEVVTAAARPVNERAYLTASDFSDTSIVASYLGPVAVSGSYAILGAYGKDSLGISNAGGAYAFELNATTGAWEEKAVLETQGFASDAAGKAVAISGTYAAAGAPSRLAGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWSRGTASGGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSSGKGTLGSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGAPSRTGSSGVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGADTTATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPGTASLSLSNNVGTGQYTCLTATGTQLITASSPSSGYALPELFEDSAGAHGDKYGGSVAASGSCVAIGAHAKDRNGNGFSVAAGGAYVFERDGAGAWTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYVFTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGPGALQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAGTWQQTVLPNPDAASNANLGYAVAMQGDWVFGSAPGSSSSTGSVLIWKEDAAAGTWSRVQVLTRAGAAAFDTFGKALAVCGDVLAVGAYWATSKGCIRAGAVVVFERNV 2679
            MVNVAQLQAATGAQSRYVAGLIPGSVQYLYIRARNTGTGEYTVLNATGAEVVTAAARPVNERAYLTASDFSDTSIVASYLGPVAVSGSYAILGAYGKDSLGISNAGGAYAFELNATTGAWEEKAVLETQGFASDAAGKAVAISGTYAAAGAPSRLAGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWSRGTASGGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSSGKGTLGSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGAPSRTGSSGVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGADTTATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPGTASLSLSNNVGTGQYTCLTATGTQLITASSPSSGYALPELFEDSAGAHGDKYGGSVAASGSCVAIGAHAKDRNGNGFSVAAGGAYVFERDGAGAWTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYVFTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGPGALQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAGTWQQTVLPNPDAASNANLGYAVAMQGDWVFGSAPGSSSSTGSVLIWKEDAAAGTWSRVQVLTRAGAAAFDTFGKALAVCGDVLAVGAYWATSKGCIRAGAVVVFERNV
Sbjct:    1 MVNVAQLQAATGAQSRYVAGLIPGSVQYLYIRARNTGTGEYTVLNATGAEVVTAAARPVNERAYLTASDFSDTSIVASYLGPVAVSGSYAILGAYGKDSLGISNAGGAYAFELNATTGAWEEKAVLETQGFASDAAGKAVAISGTYAAAGAPSRLAGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWSRGTASGGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSSGKGTLGSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGAPSRTGSSGVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGADTTATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPGTASLSLSNNVGTGQYTCLTATGTQLITASSPSSGYALPELFEDSAGAHGDKYGGSVAASGSCVAIGAHAKDRNGNGFSVAAGGAYVFERDGAGAWTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYVFTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGPGALQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAGTWQQTVLPNPDAASNANLGYAVAMQGDWVFGSAPGSSSSTGSVLIWKEDAAAGTWSRVQVLTRAGAAAFDTFGKALAVCGDVLAVGAYWATSKGCIRAGAVVVFERNV 893          
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A835Z2L7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2L7_9STRA)

HSP 1 Score: 417 bits (1073), Expect = 1.720e-128
Identity = 339/929 (36.49%), Postives = 486/929 (52.31%), Query Frame = 1
Query:    1 MVNVAQLQAATGAQSRYVAGLIPGSVQYLYIRARNTGTGEYTVLNATGAEVVTAAARPVNERAYLTASDFSDTSIVASYLGP-VAVSGSYAILGAYGKDS-LGISNAGGAYAFELNATTGAWEEKAVL-ETQGFASDAAGKAVAISGTYAAAGAPS-----RLAGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWSRGTAS-GGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSSGKGTLGSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGAPSRTGSS-----GVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGADTT----ATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPGTASLSLSNNVGTGQYTCLTAT------GTQLITASSPSSGYALPELFEDSAG------AHGDKYGGSVAASGSCVAIGAHAKDRNGNGFSVA-AGGAYVFERDGAGA-WTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYVFTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGPGALQK---GKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAGTW-QQTVLPNPDAASNANLGYAVAMQGDW-VFGSA---PGSSSSTGSVLIWKEDAAAGTWSRVQVLTRAGAAAFDTFGKALAVCGDVLAVGAYWATSKGCIRAGAVVVF 2667
            M N   ++  T AQ+ Y +GL  G+  +L++RA+N  TG YTVL+++G ++  +AA    E A LTA D       + Y G  VA+SG YA++GA+ KD  +G++++G AY  EL++ TG W   AVL  T  +  D+ G  V++SGTYA  GAP      +   G AYV+ERN+GT AW+QK  L ASD++P DSFG ++ ++GTY  VGA ++   G A+ G VY+F+RN GSG WE+ A +  SD  A   +G +V+  GTY IVG+  K   G AYV ER+  TG W EKA+L   D  A + TFG SVA+  S A+VG P+++ SS     G Y+YER +G  W   A +       +   G +VA++G Y + G ++      +  G   +YKRN+T+GVWE+K   TASD A SD+ G+ V +SG      +   +V GV  AG   VY+LPS +   P    L+ S    T   T   AT       T +++ S+  S  +   ++ ++A          D +G SVA SGS   +GA+ +       S+A AG AYV E +G+   W  K  L+ +D    DLFG +V +SG YAVVGA     GGK   G AY FER++GTGAW QK  L       +  FGYSV + G     GA  +    A+  G  YVF RNS S  WE  + +      T+  FG    W+    + V  + A  GA  K   G AY F   S    S+    Q+ +LT  D          A FG  ++++DG    V A  +    ++   +G VY++E+ A TW Q+ +L NPD A+    GY+VA+ G + V G     P S  + G+  ++K ++  G W      T +   A D  G ++ + G  +   AY  T  G   AG   V+
Sbjct:    1 MANACIIRPWTLAQTVYPSGLPAGTSPWLFVRAKNVLTGAYTVLSSSGTQITLSAASLYYEAAALTAFDPG----ASDYFGQIVAISGGYAVIGAWAKDPPVGLADSGAAYVLELDSGTGEWVHSAVLYPTDAYPGDSFGYGVSVSGTYAVIGAPQSDPTGKTDAGAAYVFERNSGTGAWEQKTKLIASDSMPSDSFG-TVGVSGTYAIVGAYSKKQLGIANFGAVYLFERNVGSGVWEQKASLYPSDYLAGSYYGSSVSISGTYAIVGAYQKAGGGGAYVLERNTGTGAWEEKAILTCPD--ATTATFGISVAIDNSYAIVGGPAKSVSSLSSAGGAYIYERVSG-TWTLTATINNPDPAASDSFGNAVAVNGIYAVIGCNSKDPAGKSAAGSTYLYKRNSTTGVWENKIEWTASDGAASDQFGASVGVSGTHVLSGAYRKAVNGVSPAGGAYVYELPSTTTISPLATILAPSTVSTTDNATVTIATLGTDADYTYVVSYSTTISSLSAASIYYEAAALTAFDPVASDHFGQSVAVSGSYAIVGAYWRYP----LSIATAGVAYVLELNGSTMEWEHKAVLYPTDAYTNDLFGVAVFISGTYAVVGASASDPGGKTDAGAAYAFERNSGTGAWEQKTKLVASDAMPSDSFGYSVGVSGTYAIAGAHVRTRLGASSSGGAYVFERNSGSGVWEQKSVLFPSDLPTASKFG----WS----VSVSGTYAIVGAYLKTGGGGAYIFERNS----STGAWEQKAILTCPDSTI-------AQFG-YSVSIDGTYAVVSAQNKSVNSLA--TAGGVYMYERVASTWTQKAILENPDPAATDQFGYSVAVSGVYAVIGCVNKDPASKGNAGATYLYKRNSTTGVWESKMEWTASDGLASDQMGWSVGLSGTHVVSSAYNKTVTGLSTAGGAYVY 895          
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A835Z0X2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0X2_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 2.450e-128
Identity = 330/910 (36.26%), Postives = 474/910 (52.09%), Query Frame = 1
Query:    1 MVNVAQLQAATGAQSRYVAGLIPGSVQYLYIRARNTGTGEYTVLNATGAEVVTAAARPVNERAYLTASDFSDTSIVASYLGPVAVSGSYAILGAYGKDSLGISNAGGAYAFELNATTGAWEEKAVL-ETQGFASDAAGKAVAISGTYAAAGAPS-----RLAGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWSRGTAS-GGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSSGKGTLGSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGAPSRTGSS-----GVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGAD----TTATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPGTASLSLSNNVGTGQYTCLT-------ATGTQLITASSPSSG------YALPELFEDSAGAHG------DKYGGSVAASGSCVAIGAHAKDRNGNGFSVA-AGGAYVFERDGAGA-WTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYVFTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGPGALQK-GKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAGTWQQTVLPNP-DAASNANLGYAVAMQGDWVFGSAPGSSSSTGSVLIWKEDAAAGTWSRVQVLTRAGAAAFDTFGKALAVCGDVLAVG 2613
            M NV  ++  T AQ+ Y +GL  G+  +L++RA+N  TG YTVL+++G ++  +AA    E A LTA D   +    S    VA+SG YA++GA+ KD +G++++G AY  EL++ TG W    VL  T  +  D+ G  V++SGTYA  GAP      +   G AYV+ERN+GT AW+QK  L ASD +P DSFG S+ + GTY  VGA ++   G A+ G VYVF+RN GSG WE+ A +  SD  A   +G +V+  GTY IVG+  K   G AY+ ER+A T  W EKA+L   D  A +  FG SVA+  S A+VG P+++ SS     G YVYER +G  W   A +       +   G +V ++G Y + G +       +  G   +YKRN+T+GVWE+K   TASD   SD  G+ V +SG      +   +V GV  AG   VY+L S +   P  A++S  + V T     +T       A  T +++ S+ +        +    ++ ++A          D +G SVA SGS   +GA+ +       S+  AG AYV E +G+   W  K  L+ +D    DLFG +V +SG YA+VGA     GGK   G AY FER++GTGAW QK  L       +  FG SV + G    VGA  +    A+  G  YVF RNS S  WE+  A+       SD FG + +  S    LVGAS + PG     G AY F   S     +    Q   L   D L GD FG        ++ V G     GAY +    +  +NSG VY FE+++G WQ+  +  P D  + ++ GY+V++ G +    A  + S  G   I++ +++ GTW    +LT   +    TFG ++++ G    +G
Sbjct:    1 MANVCIIRPWTIAQTVYPSGLPAGTSPWLFVRAKNVLTGTYTVLSSSGTQLTLSAASLYYEAAALTAFDPGASDYFGSN---VAISGGYAVIGAWAKDPVGLADSGAAYVLELDSGTGEWVHSTVLYPTDAYPGDSFGNGVSVSGTYAVVGAPQSDPTGKTDAGAAYVFERNSGTGAWEQKTKLIASDAMPSDSFGLSVGVNGTYAIVGAYSKKQLGIANFGAVYVFERNVGSGVWEQKASLYPSDYLAGSYYGSSVSISGTYAIVGAYQKAGGGGAYILERNAGTNAWEEKAILTCPD--ATTAQFGSSVAIDNSYAIVGGPAKSVSSLSSAGGAYVYERISG-TWTLTATINNPDPAASDSFGTAVTVNGIYAVIGCNGKDPAGKSGAGSTYLYKRNSTTGVWENKIEWTASDGVASDSFGTSVGVSGTHVLSGAYRKTVNGVSPAGGAYVYELSSTTTISP-LATISAPSTVSTTDNATVTIGTLGTDADYTYVVSYSTTNDSTAAMVDFGASSIYYEAAALTAFDPVVSDHFGQSVAVSGSYAIVGAYWRYP----LSITTAGVAYVLELNGSTMEWEHKAVLYPTDAYTNDLFGVAVFISGTYAIVGASASDPGGKTDAGAAYAFERNSGTGAWEQKTKLVASDAMPSDSFGCSVGVSGTYAIVGAHVRTRLGASSSGGAYVFERNSGS-GWEHRAALYPSDAYASDQFGTSVS-VSGTYALVGASASDPGGKSSAGAAYVFERNS----GTGAWEQSIKLVASDALPGDRFGS-------SVGVSGTYAIAGAYGKK--QLGLANSGGVYAFERSSGVWQEKAILFPSDLPAASSFGYSVSISGSYAIAGAY-TKSGGGGAYIFERNSSTGTWEEKAILTCPDSTG-ATFGYSVSIDGTYAVIG 882          
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A835Z582_9STRA (FG-GAP repeat-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z582_9STRA)

HSP 1 Score: 367 bits (941), Expect = 1.690e-106
Identity = 333/913 (36.47%), Postives = 453/913 (49.62%), Query Frame = 1
Query:  247 VAVSGSYAILGAYGKDSLGISNAGGAYAFELNATTGAWEEKAVL-ETQGFASDAAGKAVAISGTYAAAGA----------PSRLAGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWSRGTA-SGGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSSGKGTLGSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGAPSRTGSS-----GVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGAD----TTATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPS---LSASPP-GTASLSLSNNVG-TGQYTCLTATGTQLITASSPSSGYALP-----ELFEDSAGAH------GDKYGGSVAASGSCVAIGAHAKDRNGNGFSVAAGGAYVFERDGA-GAWTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYVFTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGP-GALQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSV-----ALAVDG-------ERIAVGAYLRDA----------------------------GPVSGSN-SGAVYVFEKAA------------------GTWQ-QTVLPNPDAASNANLGYAVAMQGDWV----FGSAPGSSSSTGSVLIWKEDAAAGTWSRVQVLTRAGAAAFDTFGKALAVCGDVLAVGAYWATSKGCIRAGAVVVFERN 2676
            VAVSG+YA++GAY  D  G ++AG AY FE N+ TGAW +   L  +    +D  G  V++SGTYA  GA           S  A G AYV+ERN+GT AW     L ASD +PGD FG+S++++GTY  VGA  R   G   SGGVYVF+RN+G+  WE+ A++  SD      FG  V+  GTY +VG+ GK   G AYV+ER++ TG W EKA+L  SDS   S  FG+SVA+ G+ AVVGA ++T SS     G Y++ER +G  W   A++       +   G SVA++G Y + G +     + +  G   +YKRN+T+G WE+K   TAS + +         ++G TA  +  F   A V ++   +V    S    + +PP GTA+L+    V  +G Y  + A     ++ ++    Y L      E +E  A  +      GD +G SVA SG+   IGA   D  G      AG AYVFER+ + GAWTQ TKL ASD    D FG SV VSG YA+VGAYN+ + G A  G AYVFER++G+G W  KA LYP        FG SV++ G    VGA     G     GA YVF RNS + AWE  T + A     +D FG + +  S    +VGA      G +  G AY F   S     + T  Q   L P D +T   FG   +         AL+  G       ER +VGA+   A                              VS  N +G  YVFE+AA                  G W+ + VL   DA ++   GY+VA+ G +     F S PG  +S G+  +++ ++    W +   L  + A   D FG +++V G    VGAY     G   +G   VFERN
Sbjct:   69 VAVSGTYAVVGAYASDPGGKTDAGAAYVFERNSGTGAWTQGTKLVASDAMTNDYFGYTVSVSGTYAIVGAYNKKQQGDALSSGAAAGAAYVFERNSGTGAWASGTKLVASDAMPGDRFGSSVSVSGTYAVVGAYWRTQLGVGNSGGVYVFERNSGTAVWEQKAVLFPSDLATGSFFGT-VSVSGTYAMVGAYGKTGGGGAYVYERNSGTGAWEEKAILPCSDSTIAS--FGQSVAIDGTYAVVGAYTKTVSSLASAGGAYMFERLSG-TWTQTAILDNPDPAASDFFGISVAVNGIYAVIGCNGKYPASKSMAGATYLYKRNSTTGAWENK---TASQSVL---------ITGLTALTTYYFWVRAKVTSSSAYIVLSASSGAITTVTPPSGTATLTFGCAVAVSGSYAVVGAQLKDPLSVANAGGAYVLELSGTTEEWEHKAVLYPADAYAGDTFGSSVAVSGTYAVIGASTCDPGGE---TGAGAAYVFERNSSTGAWTQGTKLVASDAAPFDTFGYSVSVSGTYAIVGAYNRKRLGAANSGGAYVFERNSGSG-WEHKAVLYPTDACVNDGFGCSVAVSGTYAVVGASIADPGGKADAGAAYVFERNSGTGAWEQKTKLVASDAMPNDYFGYSVS-VSGTYAVVGAYVRTQLGVVYSGGAYVFERNS----GTGTWEQMAGLYPSDLVTFSRFGWSVSVSGTCAIVGALSKSGVGGAYIYERNSVGAWEEKAILTASDSTAQXXXXXXXXXXXXXXXXNNKTVSSLNGAGGAYVFERAAPSPPPXXXXXXARGQPPTGEWEHKAVLYPTDAYASDFFGYSVAVSGTYAVVGAFFSDPGGKTSAGAAYVFERNSGTIAWEQKTKLVASDAMPNDYFGYSVSVSGTYAVVGAYNRKQLGVSSSGGAYVFERN 956          
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A835YZ62_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ62_9STRA)

HSP 1 Score: 342 bits (878), Expect = 5.680e-100
Identity = 298/832 (35.82%), Postives = 420/832 (50.48%), Query Frame = 1
Query:  247 VAVSGSYAILGAYGKDSLGISNAGGAYAFELNATTGAWEEKAVL-ETQGFASDAAGKAVAISGTYAAAGAPSRL------AGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWSRGTASGGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSSGK-----GTLGSAYVFERDASTGVWTEKA-VLVPSDSVANSNTFGESVALKGSVAVVGAPSRTGSS-----GVYVYERSAGGAWQSKAVVTGVSGVFTG--RLGGSVAIDGDYLLAGADTT----ATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPG--------TASLSLSNNVGTGQYTCLTATGTQL-ITASSPSSGYALPELFEDSAGAHGDKYGGSVAASGSCVAIGAHAKDRNGNGFSVAAGGAYVFE-RDGAGAWTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYVFTRNSTSQAWEYVTAV---TAPAGGTSDSFGKATTWTSAGELLVGASTAGPGALQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAGTWQQT-VLPNPDAASNANLGYAVAMQGDW-VFG---SAPGSSSSTGSVLIWKEDAAAGTWSRVQVLTRAGAAAFDTFGKALAVCGDVLAVGA 2616
            V+VSG+YA++ A   D    +NAG AY FE N  T  WE+K  L  +   A D  G +VA+SGTYA  GA  R       +GG+ YV+ERNA ++ W+QKA+L  SD   G  FG S++++GTY   GA  +    +  GG Y+F+RN+G+G WE+  I+T SD + +  FG +VA DGTY I+G++ K        G AYVFER   +G WT+ A +L  SDS  +S  FG SV++ G+ A++GA S+T +S     G YV+ER  G  W   A++     V +   + G SV++ G Y   GA  +        G A I++RN ++G WE    L ASDA   D  GS + +SG  A V +P   + G  N+G   +++  S +A   G        T++ +   +V TG YT ++A GTQ+ ++AS+     A    F+    A  D +G +V  S S   +GA  +D  G      AG AYV E  +  G W  K  L+ SD  A D+FG +V V G YAV+G+Y     G+   G AYVFERD+ +G W     L          FG SV++      VGA  +     +  G  YVF RNS S  WE  + +     PAG     FG A+   S    +VGA T   G    G AY F       PSS    ++ +LT  D         R  FG   ++VDG    V AY +    +S   +G  YVFE+ AG W QT +L NPD A++   G++V+  G + V G     P S +S GS+ ++K +A  G W        +   A D  G ++ V G     GA
Sbjct:  135 VSVSGTYAVITANQADPGCKTNAGAAYVFERNDLTSVWEQKTKLVASDALAGDGFGSSVAVSGTYAMVGASPRTELGTANSGGV-YVFERNASSAVWEQKAILFPSDLPAGSYFGNSVSISGTYAIAGAYQK----SGGGGAYIFERNSGTGVWEQKGILTCSDSS-TANFGFSVAIDGTYAIIGANAKTVSSLANSGGAYVFER--LSGTWTQTAAILTASDS--SSGGFGYSVSIDGAYAIIGAYSKTVNSVSSAGGAYVFERVTG-TWTQAAILDNPDPVASDHDQFGRSVSVSGTYAAIGAYASDPIGKADAGAAYIFERNASTGAWEQNTKLIASDAIPGDFFGSSIGVSGTYAIVGAPSKRLLGTSNSGGAYMFERDSGNAPAGGSVGTPSSVTSTSATVADVLTGAYTVMSALGTQITLSASTMYFEAAALTAFDP---AVSDMFGNAVGMSASYFVVGAFQRDPLG---VANAGSAYVMELNNSTGEWEHKAVLYPSDAAATDMFGSAVSVRGTYAVIGSYLADPAGEVNAGAAYVFERDSSSGTWVSGGKLVASDGMPGDNFGISVAVSSTYAIVGAYSRTRLGVSASGGAYVFERNSDSGVWEQRSVLFPSDLPAG---SRFG-ASVSISGTYAIVGAYTKSGG----GGAYIFE----RNPSSGIWEEKAILTCSDSTVA-----RFGFG---VSVDGTYAIVSAYYKTVNSLS--QAGGAYVFERIAGAWTQTAILDNPDPAASDQFGFSVSASGIYAVIGCNLKDPSSKNSAGSMYLYKRNATTGGWENKVQWAASDGLAGDQLGFSVGVYGTTAVAGA 927          
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A399WKT7_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A399WKT7_9BACT)

HSP 1 Score: 232 bits (591), Expect = 2.860e-60
Identity = 281/839 (33.49%), Postives = 385/839 (45.89%), Query Frame = 1
Query:    7 NVAQLQAATGAQSRYVAG--LIPGSVQYLYIRARNTGTGEYTVLNATGAEVVTAAARPVNERAYLTASDFSDTSIVASYLG-PVAVSGSYAILGAYGKDSLGISNAGGAYAFELNATTGAWEEKAVLETQGFAS-DAAGKAVAISGTYAAAGAPSRLAG-GIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNR-WSRGTASGGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSS-----GKGTLGSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGA-----PSRTGSSGVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGADT----TATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPGTASLSLSNNVGTGQYTCLTATGTQLITASSPSSGYALPELFEDSAGAHGDKYGGSVAASGSCVAIGAHAKDRNGNGFSVAAGGAYVFERDGAGAWTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYVFTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGPGA-LQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAGTWQ-QTVLPNPDAASNANLGYAVAMQGDWVFGSAP 2457
              A+L A+ GA + Y      I G++  +  R  N+  G   V    G            E   LTASD +  +    Y G  VA++G   I+GA G  +LG    G AY F  ++ T  W E+  L   G AS D  G +VA  G  A  GA    +G G AYV+ER+   S+W Q   L ASD   GD+FG S+A++G+   VGA N         G  YVF  + GS  W E A +T +      QFG +V+  G   IVG++     G    G+AYVF R  S  +WT++A L  SD VA+   FG SVA+ G VAVVGA      + +     YV++RS G  W     +T   G+    +G SVA+ G+  +AG+      + + QG A +++   T   W  +    ASD A  D+LGS VA+SG TA V +P        N G+              G+A + + +  G  Q   L A                       S GA GD +G SV+     V +GA   D    G +   G AYVF R G  +WTQ+ KL +SDG  GD FG SV +    A VGA      G    G  YVF R +GT  W+++A L      T   FG SV++ G    VGA       AT  G+ YVF  + +S  W     +TA  G  SD FG +    S   ++VGA T   G    +G AY F        ++ T SQ+  LT  D    D FG       +++ V G+   VG+Y+   GP   S  G+ YVF + +GTW  Q+ L     A++   G +VA+ GD +   AP
Sbjct:   76 QTAKLIASDGAVNDYFGASVAIQGNLAVVGSRFDNSAQGSAYVFELVGTTWT--------EVQKLTASDAAPNA----YFGYSVAIAGDTIIVGALG--ALGFQ--GAAYVFVFSSPT--WVEQQKLTATGGASGDLFGASVAAYGDTAIVGAFGVSSGTGSAYVFERSG--SSWTQVQQLIASDASLGDNFGVSVAISGSTAIVGAYNDDVGANPDQGSAYVFFYSGGS--WIEQAQLTGTSGPPGGQFGYSVSISGDTAIVGAALDDAFGNSNRGAAYVFTRSGS--LWTQQAYLSASDGVADDQ-FGNSVAVSGDVAVVGAYLDDVGTNSNQGSAYVFKRS-GTIWTQTEHLTPSDGIAGQSVGVSVAVSGNNAIAGSPYDQIGSNSAQGSAYVFRVLGTG--WTQEAQKVASDGAGGDRLGSSVAISGDTAVVGAPDK------NGGQ--------------GSAYVFVRSGAGWTQQGQLVA-----------------------SDGAAGDNFGVSVSIYRDTVVVGADTADV---GVNADQGSAYVFTRSGT-SWTQQAKLNSSDGAGGDAFGHSVSIDSDTAFVGADQHTVLGNLSQGSVYVFVR-SGT-VWTEQAELTSIGGSTGDHFGTSVALSGTTAIVGA-NLDDALATDQGSAYVFVGSGSS--WTQQAQLTAADGAASDQFGTSVA-ISGDTVIVGADTDDVGVNTGQGSAYVFTR------TAGTWSQQAHLTAPDGSANDNFG-------ISVGVSGDTAVVGSYVDTVGP--NSAQGSAYVFTRTSGTWSFQSHLTAAGGAADDEFGTSVAISGDKIVVGAP 818          
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A3D3NV84_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3D3NV84_9BACT)

HSP 1 Score: 234 bits (596), Expect = 4.850e-60
Identity = 291/958 (30.38%), Postives = 406/958 (42.38%), Query Frame = 1
Query:  172 PVNERAYLTASDFSDTSIVASYLGP-VAVSGSYAILGAYGKDS--LGIS--------NAGGAYAFELNATTGAWEEKAVLETQGFAS-DAAGKAVAISGTYAAAGA-------------PSRLAG--GIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWS-----------RGTASGGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIV-------GSSGKGTL--------GSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGA----PSRTG-----------SSGVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGA--------------DTTATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPGTASLSLSNNVGTGQYTCLTATGTQLITASSPSSGYALPELFEDSAGAHGDKYGGSVAASGSCVAIGAHAKDRNGNGFSVA-------AGGAYVFERDGAGAWTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQG----------GKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATL----------VGATYVFTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTA-------------GPGALQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPV--------SGSNSGAVYVFEKAAGTW-QQTVLPNPDAASNANLGYAVAMQGDWVFGSAPGSSSSTGSVLIWKEDAAAGT------------WSRVQVLTRAGAAAFDTFGKALAVCGDVLAVGA 2616
            P+ ++AY+  SD  DT+      G  VAVSG   ++GA  +DS   GI+        NAG AY F  N TT  W ++A L+     S D  G +VA+SG     G              P+   G  G AYV+ R+  T  W Q+A L++     GD+FG S+A++G    VGA+   S             T++G  YVF R+  +  W + A + A   +   QFG +VA  G    +       GS+G  +         G+AYVF R   T  WT++A L P    AN N FG SVA+ G   VVG+     S TG           +   YV+ RS G  W  +A +           G SVA+ GD ++ GA              + TAT  G A ++ R+ T+  W  + +L A +A   D+ G  VA+SG +  V + F       ++  T +   P+ +A   G A + +       Q   +  T            G A P  F        D++G SVA SG  V IGA  +D +  G +         AG AYVF RDG GAW+Q+  L A    A D FG SV VSG   VVGA N+                  G AYVF RD G GAWSQ+A L   Q     QFGYSV++ G  + +G PG+      +           GA YVF R+ T   W     + A   G  D FG + +  S    ++GA +              G      G AY F        +    SQ+  L       GDAFG       + +AVDG+ + VGA   D+G          S +++GA YVF ++   W QQ  L      +    G +VA+ GD V   A    S+T  +    +++AA              W +   L      A D FG ++AV G+ + VGA
Sbjct:  255 PIAQQAYMKRSDPRDTAGPGDGFGESVAVSGDTVVVGARFEDSGTTGINSTPDELANNAGAAYVFVRNGTT--WTQQAYLKAHQVTSGDFFGGSVAVSGDTVVVGGYLEDSNTTGVNSTPNEGLGNTGAAYVFVRSGST--WTQQAYLKSHQVSVGDNFGVSVAVSGDTVVVGANFEDSGTTGVNSTPDESATSAGAAYVFVRSGST--WTQQAYLKAHQVSEFDQFGFSVAVSGDTAAISGVAERSGSTGVNSTPDESAVNAGAAYVFVRSGVT--WTQEAYLKPHQVNANDN-FGNSVAVDGDTVVVGSRFEDSSTTGIDSTPNESAISAGAAYVFARS-GTTWTQQAYLKAHQVTAGDNFGTSVAVSGDTVVVGAYFEDSSTTGINSTPNETATSAGAAYVFVRSGTT--WSQQAYLKAGNAGQDDRFGISVAVSGDSVVVGASFE------DSSLTGINRTPNEAAPDSGAAYVFVRGGADWSQQAYVKPTPIP--------PGGAGPAAF--------DQFGASVAVSGDTVVIGAPNEDSSSTGVNGIPNESVEDAGAAYVFVRDGGGAWSQQAYLKAHQVTAEDYFGASVAVSGDTVVVGARNEDSSTTGINSTPNESAGNAGAAYVFVRDGG-GAWSQQAYLKASQVTADDQFGYSVAVSGDTVVIGTPGEDSSTPGVNSTPNESLGSSGAAYVFVRDGTD--WTQQAYLKAGLPGHEDEFGTSVS-VSGDTAVIGAYSEDSFISGINSTPKKGISGSAAGAAYVFVR------NGTAWSQQAYLKAQQVTDGDAFG-------LYVAVDGDTVVVGAPYEDSGTTGVNSAPDKSVADAGAAYVFVRSGTVWSQQAYLKAHQVTTGDQFGVSVAVSGDTVVVGALFDDSATTGINSTPDESAANAGAAYVFVRSGAVWIQQAYLKAGQVTAGDFFGGSVAVSGETVVVGA 1161          
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A662DTP3_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A662DTP3_9BACT)

HSP 1 Score: 214 bits (546), Expect = 4.640e-55
Identity = 230/731 (31.46%), Postives = 323/731 (44.19%), Query Frame = 1
Query:  553 PGDSFGASIAMTGTYCFVGASNRWSRGTASGGVYVFQRN-AGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSSGKG----TLGSAYVFERD-ASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGA----PSRTGSSGVYVYERSAGGA--WQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGA---DTTATQQGVACIYKRNTTSGV--WEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPGTASLSLSNNVGTGQYTCLTATGTQLITASSPSSGYALPELFEDSAGAHGDKYGGSVAASGSCVAIGAHAKDRNGNGFSVAAGGAYVFER--DGAGAWTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTG-TGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYVFTRN-STSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGPGALQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAG---TW-QQTVLPNPDAASNANLGYAVAMQGDWVFGSAPGSSSSTGSVLIWKEDAAAGTWSRVQVLTRAGAAAFDTFGKALAVCGDVLAVGAYWATSKGCIRAGAVVVFE 2670
            PG  FG S A+ G    VGA      G+  G  Y+F RN  G+  W ++A +TASD      FG +V      ++VG+ G        GSAYV+ RD     VW + A +  SD  A+SN FG +V++ G   VVGA         S   YV++R  GGA  W   A ++   G      G SVAI G  ++ GA       +  G A ++ RN   GV  W +   +TASD A  D     V++SG T  V +      G                 S  G+A++S  N  G   +                  G    ++  D+  A GD +G SV+ SG  V +GA   D NG    + +G AYVF+R   GA  W Q  K+ ASDG + + FG SV +SG   VVGAY     G    G AYVF+R+ G    W Q A +          FGYSVSI G  + VGA G         G+ YVF RN   + AW  V  +TA  G     FG A    S   L+VGA          G AY F         + T  Q   +   D + GD FG        ++++ G+ + VGAY  D    +GS SG+ YVF++  G    W Q   +   D  + A  G +V++ GD V   A     +  + +  +++  A  W ++  +T +G A  D FG ++++ G    +G       G I +G+  +FE
Sbjct:   75 PGSYFGFSTAVAGDLMVVGAYGE-EAGSNVGAAYIFDRNEGGADTWGQIAKITASDGAGDDYFGYSVGISSDTVVVGAYGDDDNGPNSGSAYVYARDQGGADVWGQVAKISASDG-ADSNYFGRAVSINGDTVVVGAFGDDDDGLNSGSAYVFDRDQGGADTWGQVARISASDGAHDDSFGYSVAISGGTVVVGAPGDSDNGSDSGSAYVFDRNE-GGVDGWVEVAKITASDGADDDYFSYSVSISGDTVVVGAYRDDDNG-----------------SDSGSATISDRNEDGADAW------------------GQVTKKVAPDTLTARGDSFGYSVSISGDTVVVGAFGDDDNG----LNSGSAYVFDRYQGGADTWGQVAKIAASDGASHNYFGYSVSISGDTVVVGAYGDDDNGGFS-GSAYVFQRNEGGVDTWGQVAKIVASDGVNGDFFGYSVSISGDTVVVGAYGDDDNNMAS-GSAYVFGRNMGGADAWGQVEKITASDGVGGAFFGWAVA-ISGDTLVVGAWGDDDIGSDSGSAYVFGRNKG---GADTWRQVAKIVASDGVNGDFFG-------YSVSISGDTVVVGAYGDDD---NGSISGSAYVFDRDEGGADIWGQMAKITASDGVTYALFGKSVSISGDTVAAGADEEDGNGSAYVFGRDEGGADIWGQMAKMTASGGAGSDLFGYSVSISGATAVIGTPDDDDVG-IDSGSASIFE 746          
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A0M9E2L2_9DELT (Dystroglycan-type cadherin-like domain protein (Fragment) n=1 Tax=Candidatus Magnetomorum sp. HK-1 TaxID=1509431 RepID=A0A0M9E2L2_9DELT)

HSP 1 Score: 216 bits (551), Expect = 3.980e-54
Identity = 256/851 (30.08%), Postives = 393/851 (46.18%), Query Frame = 1
Query:  178 NERAYLTASDFSDTSIVASYLG-PVAVSGSYAILGAYGKDSLGISNAGGAYAFELNATTGAW-EEKAVLETQGFASDAAGKAVAISGTYAAAGA----PSRLAGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWSRGTASGGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGS---SGKGTL-GSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGAPSR----TGSSGVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGAD---TTATQQGVACIYKRNTTSGVWE--DKGWLTASDA-----AISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPS--------LSASPPGTASLSLSNNVGTGQYTCLTATGTQLITASSPSSGYALPELFEDSAGAHGDKYGGSVAASGSCVAIGAHAKDRNGNGFSVAAGGAYVFERDGAGAWTQKTKLFASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTGAWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLV--GATYVFTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGPGALQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVALAVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAGTWQQTV-LPNPDAASNANLGYAVAMQGDWVFGSAPGSS---SSTGSVLIWKEDAAAGTWSRVQVLTRAGAAAFDTFGKALAVCGDVLAVGA 2616
            ++ A LTA D +D+     Y G  V++SG+YAI+GAY  D  G SN+G AY +  N     W +   +L + G  +D  G  VAISG  A  GA     S    G  Y+++R    S+W Q+A L ASD    D FG  + + G Y  +GA +    G++SG  Y+F  N  +  W + A +TASD  AS  FG AV     + +VG+     +G+  GSAY+F+RD ++  W++   L P D  A+ + FG ++++  +  +VG+       + S   YVYE+  G  W  K  +T   G  +      VA+    ++ G     +     G A IY   +   + E  D+ +  +SD       I+D  G  + ++  ++  +    +   V N+G   +    +        LS SP  T   S +  +       LT T     + S P    A  ++  D  G   D +G +V+ SG    + A+  D NG+     +G  Y+ +R  +G W   TKL ASDG   D FGCSV +SG +A+VGA N      +  G AY+F R      W Q+  +Y      +  FGY+VSI G  + VGA      +AT    GA Y+F ++     W     + A     SD FG + +  S    +VGA          G AY F        +    SQE  +   D +  D FG        ++++ G+ I VGAY  D+   +GSNSGA YV+++   TW Q   L + D A+    G  V++ GD+    A       S++G++ I+K   +   W ++Q +  + AA  DTFG A+A+    +  GA
Sbjct: 1398 SQAAKLTAHDGNDSD----YFGFNVSISGNYAIVGAYYDDDKG-SNSGSAYIY--NRIGNQWIQSTKLLASDGLDNDRFGYNVAISGDKAIVGAYLDDHSYTDQGSVYIFKREG--SSWVQQAKLTASDRAASDYFGFEVDIFGNYAIIGAYSDDDNGSSSGSAYIFYYNGTN--WTQQAKLTASDGEASDNFGYAVEISEDFALVGAYADDDEGSASGSAYIFKRDGTS--WSQWQKLTPGDG-ASDDYFGYNLSISDNYVIVGSKGDDDQGSASGSAYVYEKL-GTNWIFKVKLTSTDGQPSESFAWDVAVSETEVIVGTPNGYSNDVSTGSAYIYTFQSRPIITEIIDQSFDLSSDTYAMSFTIADADGQNITINAYSSDQNIVSDNDIDVGNSGNNFIVSSTTEGQLLSFDLSLSPQKTEYGSTTITLMITDADGLTCTSNFTFSLSPP----AEEKIIADD-GEADDTFGNAVSISGDYAIVSANKDDDNGSN----SGSVYILQRHASG-WQHSTKLIASDGNTDDNFGCSVDISGNFAIVGA-NYDDPTYSNTGTAYIFRR--AGNLWQQEDLIYASDRAASDYFGYAVSISGEYVIVGA---YADDATYTNQGAAYIFIKDGVD--WVQQAKLIASDKQASDYFGISVS-ISGDYAVVGAYAEDTKGSASGAAYVFKR------NGTAWSQEAKIYASDGVANDNFGR-------SVSISGDTILVGAYSHDS---NGSNSGAAYVYQRDGSTWTQVAKLTSNDIAAGDYFGLPVSLSGDYAAIGAYNKDEFGSNSGAIYIFKRIIS--DWVQIQKIVASDAAETDTFGNAVAINNGYVIAGA 2196          
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Match: A0A835YYF1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF1_9STRA)

HSP 1 Score: 203 bits (516), Expect = 5.420e-54
Identity = 150/414 (36.23%), Postives = 229/414 (55.31%), Query Frame = 1
Query:  130 LNATGAEVVTAAARPVNERAYLTASDFSDTSIVASYLGPVAVS--GSYAILGAYGKDSLGISNAGGAYAFELNATTGAWEEKAVL-ETQGFASDAAGKAVAISGTYAAAGAP----SRLAGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYCFVGASNRWSRGTAS-GGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAVAADGTYLIVGSSGKGTL-GSAYVFERDASTGVWTEKAVLVPSDSVANSNTFGESVALKGSVAVVGAPSRTGSS-----GVYVYERSAGGAWQSKAVVTGVSGVFTGRLGGSVAIDGDYLLAGA----DTTATQQGVACIYKRNTTSGVWEDKGWLTASDAAISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYD 1317
            + A+G  + T+A     + A LT ++    +    Y   VAV    +YA++    + + G+S+AGGAY  EL+A  G W+  A+L  T    SD+ G+ VA+SGTYA  G+      RL  G AY++ER AGT  W Q   L ASD  PGD+FG +++++GTY  VGA+ R+  G AS GG Y+F+RN  +G WE+ A +  SD      FG  +   GTY IVG+  K T  G AY+FER++++G W EKA+L  SD  AN   FG++V++ G+ AVV A  +T ++     G YV+ER +G  W   A++       +   G SV++ G Y + G      ++ +  G   ++KR+ T+G+W      TA+D   SD +G  V+++G      + F + AGV   G   +++
Sbjct:    1 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYAVITGT-RAAYGLSSAGGAYVLELDAN-GEWDTNAILVPTDVATSDSFGRCVAVSGTYAILGSQCDVGGRLNAGAAYMFERIAGT--WTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGAGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMK-FGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSG-TWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSPTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 408          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157641 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWQ7_9STRA0.000e+0100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z2L7_9STRA1.720e-12836.49Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z0X2_9STRA2.450e-12836.26Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z582_9STRA1.690e-10636.47FG-GAP repeat-domain-containing protein (Fragment)... [more]
A0A835YZ62_9STRA5.680e-10035.82Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A399WKT7_9BACT2.860e-6033.49Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A3D3NV84_9BACT4.850e-6030.38Uncharacterized protein n=1 Tax=Verrucomicrobiales... [more]
A0A662DTP3_9BACT4.640e-5531.46Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A0M9E2L2_9DELT3.980e-5430.08Dystroglycan-type cadherin-like domain protein (Fr... [more]
A0A835YYF1_9STRA5.420e-5436.23Uncharacterized protein (Fragment) n=2 Tax=Tribone... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:357874..362334 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157641|e_gw1.3.141.1
DescriptionFG-GAP repeat
COG categoryS
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG1520@1|root,COG3266@1|root,COG1520@2|Bacteria,COG3266@2|Bacteria,4NQBS@976|Bacteroidetes,47QPM@768503|Cytophagia
Evalue1.36e-42
Seed ortholog1123277.KB893197_gene6105
Hectar predicted targeting categorymitochondrion
TranscriptId157963
TrackFilteredModels1
ProteinId157641
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157641gene_51Tribonema minus UTEX_B_3156 geneContig_3 357874..362334 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_51_1exon_51_1Tribonema minus UTEX_B_3156 exonContig_3 357874..359244 +
exon_51_2exon_51_2Tribonema minus UTEX_B_3156 exonContig_3 360079..360276 +
exon_51_3exon_51_3Tribonema minus UTEX_B_3156 exonContig_3 360763..361362 +
exon_51_4exon_51_4Tribonema minus UTEX_B_3156 exonContig_3 361825..362334 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_51CDS_51Tribonema minus UTEX_B_3156 CDSContig_3 357874..359244 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157641Trimin1|157641|e_gw1.3.141.1Tribonema minus UTEX_B_3156 polypeptideContig_3 357874..362334 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_51 ID=mRNA_51|Name=jgi.p|Trimin1|157641|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2679bp|location=Sequence derived from alignment at Contig_3:357874..362334+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGAACGTGGCGCAGCTGCAGGCCGCCACCGGGGCTCAGAGCAGGTA
CGTCGCGGGGCTGATACCGGGCTCCGTGCAGTACCTGTACATCCGCGCCA
GGAACACCGGCACCGGAGAGTACACTGTGCTGAACGCGACGGGAGCGGAG
GTCGTGACGGCAGCGGCCAGGCCCGTCAACGAACGCGCGTACTTGACCGC
CAGTGACTTCAGCGATACCTCCATCGTCGCCAGCTACCTCGGCCCTGTCG
CCGTGAGCGGGAGCTACGCGATCCTGGGCGCGTACGGCAAGGATTCGCTG
GGCATCTCCAACGCCGGCGGCGCCTACGCATTCGAGCTGAACGCGACGAC
AGGAGCGTGGGAGGAGAAGGCGGTGCTGGAGACGCAGGGCTTTGCCTCGG
ATGCGGCCGGCAAGGCGGTGGCGATCAGCGGGACGTACGCCGCGGCGGGA
GCACCGAGCAGGCTGGCGGGGGGCATCGCGTACGTGTACGAGCGGAACGC
CGGCACCTCAGCGTGGCAGCAGAAGGCGGTGCTTCGAGCGAGCGACACGC
TGCCCGGCGACTCTTTCGGCGCCTCGATCGCCATGACGGGCACCTACTGC
TTCGTCGGGGCGAGCAACAGGTGGAGCAGGGGCACCGCCAGCGGGGGTGT
GTACGTCTTCCAGCGCAACGCCGGCAGCGGGGCGTGGGAGGAGGTCGCGA
TAGTCACGGCCAGCGACGAGACTGCGAGCTGCCAGTTCGGGGAGGCCGTC
GCCGCGGACGGGACGTACCTGATCGTCGGTTCCAGCGGGAAGGGCACTCT
CGGCAGCGCCTACGTGTTCGAGCGCGACGCCAGCACGGGAGTGTGGACGG
AGAAGGCCGTCCTGGTCCCGTCGGATTCGGTCGCCAATTCCAACACTTTC
GGGGAGAGCGTGGCGCTCAAGGGGTCGGTAGCCGTGGTGGGAGCTCCCAG
CAGGACGGGCAGCAGCGGGGTGTACGTGTACGAGCGCTCCGCCGGGGGGG
CGTGGCAGAGCAAGGCCGTGGTGACGGGGGTCAGCGGCGTGTTCACGGGT
CGCCTCGGAGGCAGCGTCGCCATCGACGGGGACTACCTCCTGGCGGGCGC
GGACACGACGGCCACTCAGCAGGGCGTGGCGTGCATATACAAGCGAAACA
CGACATCGGGGGTCTGGGAGGACAAGGGGTGGCTGACGGCATCGGACGCG
GCGATAAGCGACAAGCTGGGCTCGTACGTGGCGCTGTCGGGCCAGACCGC
CTTCGTCTCCTCCCCCTTCCACAGCGTCGCCGGGGTGCTCAACGCCGGCA
GGACGGTGGTGTACGACCTGCCCTCGCTGTCAGCGTCGCCGCCCGGGACC
GCGTCGCTGTCCCTCTCGAACAACGTGGGCACGGGTCAGTACACTTGCCT
CACGGCCACCGGGACGCAGCTGATCACGGCGAGCTCCCCCTCCTCAGGCT
ACGCTCTCCCCGAGCTCTTCGAGGACAGCGCTGGCGCTCACGGGGATAAG
TACGGCGGCAGCGTGGCGGCCAGTGGGAGTTGCGTTGCGATCGGAGCTCA
CGCCAAGGACAGGAACGGGAACGGCTTCTCGGTCGCTGCCGGGGGCGCGT
ACGTGTTCGAACGCGACGGGGCCGGCGCATGGACCCAGAAGACCAAGCTG
TTCGCCAGCGACGGATTGGCGGGCGACCTCTTCGGCTGCTCCGTCGGCGT
GAGTGGGCGCTATGCGGTCGTCGGCGCGTACAACAAGGCCCAGGGAGGCA
AAGCGCAGTGCGGCTGCGCGTACGTCTTCGAGCGAGACACCGGCACGGGT
GCCTGGAGCCAGAAGGCGGCGCTCTACCCGCCGCAGTTCGAGACCGCCAT
GCAGTTCGGCTACAGCGTTTCCATAAGGGGGGGTGTGATCGCGGTGGGCG
CGCCCGGCAAGAAGTGCGGGGAAGCGACGCTCGTCGGGGCCACGTACGTC
TTCACGCGCAACTCCACCTCGCAAGCCTGGGAGTACGTGACCGCGGTCAC
AGCGCCGGCAGGCGGGACCTCCGACTCGTTCGGCAAGGCGACGACGTGGA
CGAGCGCAGGCGAGCTCCTCGTGGGCGCGTCGACGGCCGGCCCGGGCGCA
CTTCAGAAGGGCAAGGCGTACGCGTTCGCGCCCTGCTCGCCCGCTCCGCC
CTCCTCCGTGACGCTGTCCCAGGAGACCGTGCTGACCCCCGGCGACTGCC
TGACCGGCGACGCGTTCGGAGGCCGTGCGGCGTTCGGCTCCGTCGCCCTC
GCTGTGGACGGGGAGCGCATCGCCGTCGGAGCGTACCTGAGGGATGCGGG
ACCGGTGTCGGGGTCGAACTCGGGGGCCGTGTACGTGTTCGAAAAGGCGG
CGGGAACTTGGCAGCAGACGGTGCTGCCGAACCCCGACGCCGCCTCCAAT
GCCAACCTCGGCTACGCAGTCGCGATGCAGGGGGATTGGGTGTTCGGCAG
TGCCCCGGGGAGCTCGTCCAGCACCGGCTCCGTCCTCATCTGGAAGGAAG
ACGCCGCCGCGGGGACGTGGTCCCGCGTGCAGGTGCTCACTCGAGCGGGG
GCGGCTGCCTTCGATACATTCGGGAAGGCTCTGGCGGTGTGCGGTGACGT
GCTGGCCGTCGGCGCCTACTGGGCCACGTCGAAGGGGTGCATCAGGGCGG
GCGCGGTCGTCGTGTTCGAGCGGAACGTC
back to top

protein sequence of jgi.p|Trimin1|157641

>Trimin1|157641|e_gw1.3.141.1 ID=Trimin1|157641|e_gw1.3.141.1|Name=jgi.p|Trimin1|157641|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=893bp
MVNVAQLQAATGAQSRYVAGLIPGSVQYLYIRARNTGTGEYTVLNATGAE
VVTAAARPVNERAYLTASDFSDTSIVASYLGPVAVSGSYAILGAYGKDSL
GISNAGGAYAFELNATTGAWEEKAVLETQGFASDAAGKAVAISGTYAAAG
APSRLAGGIAYVYERNAGTSAWQQKAVLRASDTLPGDSFGASIAMTGTYC
FVGASNRWSRGTASGGVYVFQRNAGSGAWEEVAIVTASDETASCQFGEAV
AADGTYLIVGSSGKGTLGSAYVFERDASTGVWTEKAVLVPSDSVANSNTF
GESVALKGSVAVVGAPSRTGSSGVYVYERSAGGAWQSKAVVTGVSGVFTG
RLGGSVAIDGDYLLAGADTTATQQGVACIYKRNTTSGVWEDKGWLTASDA
AISDKLGSYVALSGQTAFVSSPFHSVAGVLNAGRTVVYDLPSLSASPPGT
ASLSLSNNVGTGQYTCLTATGTQLITASSPSSGYALPELFEDSAGAHGDK
YGGSVAASGSCVAIGAHAKDRNGNGFSVAAGGAYVFERDGAGAWTQKTKL
FASDGLAGDLFGCSVGVSGRYAVVGAYNKAQGGKAQCGCAYVFERDTGTG
AWSQKAALYPPQFETAMQFGYSVSIRGGVIAVGAPGKKCGEATLVGATYV
FTRNSTSQAWEYVTAVTAPAGGTSDSFGKATTWTSAGELLVGASTAGPGA
LQKGKAYAFAPCSPAPPSSVTLSQETVLTPGDCLTGDAFGGRAAFGSVAL
AVDGERIAVGAYLRDAGPVSGSNSGAVYVFEKAAGTWQQTVLPNPDAASN
ANLGYAVAMQGDWVFGSAPGSSSSTGSVLIWKEDAAAGTWSRVQVLTRAG
AAAFDTFGKALAVCGDVLAVGAYWATSKGCIRAGAVVVFERNV
back to top

mRNA from alignment at Contig_3:357874..362334+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_51 ID=mRNA_51|Name=jgi.p|Trimin1|157641|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4461bp|location=Sequence derived from alignment at Contig_3:357874..362334+ (Tribonema minus UTEX_B_3156 )
ATGGTGAACGTGGCGCAGCTGCAGGCCGCCACCGGGGCTCAGAGCAGGTA CGTCGCGGGGCTGATACCGGGCTCCGTGCAGTACCTGTACATCCGCGCCA GGAACACCGGCACCGGAGAGTACACTGTGCTGAACGCGACGGGAGCGGAG GTCGTGACGGCAGCGGCCAGGCCCGTCAACGAACGCGCGTACTTGACCGC CAGTGACTTCAGCGATACCTCCATCGTCGCCAGCTACCTCGGCCCTGTCG CCGTGAGCGGGAGCTACGCGATCCTGGGCGCGTACGGCAAGGATTCGCTG GGCATCTCCAACGCCGGCGGCGCCTACGCATTCGAGCTGAACGCGACGAC AGGAGCGTGGGAGGAGAAGGCGGTGCTGGAGACGCAGGGCTTTGCCTCGG ATGCGGCCGGCAAGGCGGTGGCGATCAGCGGGACGTACGCCGCGGCGGGA GCACCGAGCAGGCTGGCGGGGGGCATCGCGTACGTGTACGAGCGGAACGC CGGCACCTCAGCGTGGCAGCAGAAGGCGGTGCTTCGAGCGAGCGACACGC TGCCCGGCGACTCTTTCGGCGCCTCGATCGCCATGACGGGCACCTACTGC TTCGTCGGGGCGAGCAACAGGTGGAGCAGGGGCACCGCCAGCGGGGGTGT GTACGTCTTCCAGCGCAACGCCGGCAGCGGGGCGTGGGAGGAGGTCGCGA TAGTCACGGCCAGCGACGAGACTGCGAGCTGCCAGTTCGGGGAGGCCGTC GCCGCGGACGGGACGTACCTGATCGTCGGTTCCAGCGGGAAGGGCACTCT CGGCAGCGCCTACGTGTTCGAGCGCGACGCCAGCACGGGAGTGTGGACGG AGAAGGCCGTCCTGGTCCCGTCGGATTCGGTCGCCAATTCCAACACTTTC GGGGAGAGCGTGGCGCTCAAGGGGTCGGTAGCCGTGGTGGGAGCTCCCAG CAGGACGGGCAGCAGCGGGGTGTACGTGTACGAGCGCTCCGCCGGGGGGG CGTGGCAGAGCAAGGCCGTGGTGACGGGGGTCAGCGGCGTGTTCACGGGT CGCCTCGGAGGCAGCGTCGCCATCGACGGGGACTACCTCCTGGCGGGCGC GGACACGACGGCCACTCAGCAGGGCGTGGCGTGCATATACAAGCGAAACA CGACATCGGGGGTCTGGGAGGACAAGGGGTGGCTGACGGCATCGGACGCG GCGATAAGCGACAAGCTGGGCTCGTACGTGGCGCTGTCGGGCCAGACCGC CTTCGTCTCCTCCCCCTTCCACAGCGTCGCCGGGGTGCTCAACGCCGGCA GGACGGTGGTGTACGACCTGCCCTCGCTGTCAGCGTCGCCGCCCGGGACC GCGTCGCTGTCCCTCTCGAACGTCAACCTGACGACCGCGACTGCGACGGT GTCGCTGTCTTCCCTCGGGACGGACGCCAATTGGACGTACAGCGTGAGCA GGGCGACCCAGAATCTGACCACGGCCACCATGACGAGCTGCGGGACGCTG CTGGCACAGACGGGGCCCCAGACGGTCGCCATCACGGGGCTGACGTCGGG CAGCACCTACTACATGTTCGTGACCGCCGCGAACACTGCCGGAGGCACCA GGGTCCTGACCTCGACGGGATGGGGGGTGACCATGCCGGCGCTGCTGGCT CCCGCGGGGGCTGCAATCGCCGTCGACTCCGTGACCGCGGCCGCGACCTC CGCCTCCGTGTCCGTCGCCCTCACCACCATCGGCACCAACGCCGCGTACG AGTACTACCTCAGCCGGGCGGGCTCCAATTCGACTGCTGCGGCCATGACG GATTTGGGAGCTCTGCTGGCGGGGACGGACACGCAGACCCTCGCTGTCAC CGGCCTTGCCAGCGGCAGCACGTACTACCTGTTCGCGAGGGCCAAGAACA CAAGCACGGGGACCTACGTCTACATGAACGCCACGGGCGTCCCGCTGTAC TGCAATGCACTGGCTCCGGCGAGCGGGATCGTGACTGTGGCGGTGAAGGG GCCGGACACGGCAGCGGTGAAAGTCACCCTGGGGACCATCGGCTCCACCG CCGTGTACCGGTACGTGGTCAGCCGCAGCCCGGGCAGCTCTTCCGCGGGG GCGATGACGGACTGCGGGGATGCGCTGGCGCAGAACGCGACCCAGCCCGT GGTCCTCAGCGGGCTGGCCCCGGCCAGGACGTACTACCTCTTCGTCAGGG CGCAGAACGTGGGCACGGGTCAGTACACTTGCCTCACGGCCACCGGGACG CAGCTGATCACGGCGAGCTCCCCCTCCTCAGGCTACGCTCTCCCCGAGCT CTTCGAGGACAGCGCTGGCGCTCACGGGGATAAGTACGGCGGCAGCGTGG CGGCCAGTGGGAGTTGCGTTGCGATCGGAGCTCACGCCAAGGACAGGAAC GGGGTGATCAACACGGGAGCGGTCTTCTTGTACGACTCGGTGGACGGAGA AAGGCGGGAGTCAGTGCTCGTGGGTCCCGACGCGGTCTCCGAACAGTTCG GCCAGACCGTTGCCGTCACGGACTCGTACCTCGCCGTCGGAGCTCCCATG AAGAGTTCGGATGGCAACACTTTCAACGGGGGCGTCTACCTGTACGAGCG CAACTCGGGGACTGCCGCATGGGACGCGAAGACCGAACTGAAGCCCAGCA ACGCCCCGGCGACCGCTGACCAGTTCGGATCCTCCGTCAGCCTGTGCGAC ACGTACCTGGCCGTAGGCGCGAGCGGAAAGGCGTCGAGCGCAGGACGCAT GTACGTGTACGAGAGGGATGCGGGCACCGGTGTGTGGGGCGAGAAGATCC TGACGAGCGACGCGGTCGCCGGAGATGCCCTGGGCGCATCGTGCTGCCTG GATGTCACCTACCTGATTGCCGGCTCCACCAACAGGAAGAACGGCTTCTC GGTCGCTGCCGGGGGCGCGTACGTGTTCGAACGCGACGGGGCCGGCGCAT GGACCCAGAAGACCAAGCTGTTCGCCAGCGACGGATTGGCGGGCGACCTC TTCGGCTGCTCCGTCGGCGTGAGTGGGCGCTATGCGGTCGTCGGCGCGTA CAACAAGGCCCAGGGAGGCAAAGCGCAGTGCGGCTGCGCGTACGTCTTCG AGCGAGACACCGGCACGGGTGCCTGGAGCCAGAAGGCGGCGCTCTACCCG CCGCAGTTCGAGACCGCCATGCAGTTCGGCTACAGCGTTTCCATAAGGGG GGGTGTGATCGCGGTGGGCGCGCCCGGCAAGAAGTGCGGGGAAGCGACGC TCGTCGGGGCCACGTACGTCTTCACGCGCAACTCCACCTCGCAAGCCTGG GAGTACGTGACCGCGGTCACAGCGCCGGCAGGCGGGACCTCCGACTCGTT CGGCAAGGCGACGACGTGGACGAGCGCAGGCGAGCTCCTCGTGGGCGCGT CGACGGCCGGCCCGGGCGCACTTCAGAAGGGCAAGGCGTACGCGTTCGCG CCCTGCTCGCCCGCTCCGCCCTCCTCCGTGACGCTGTCCGTCCGCAACGT GGGAACCACGACAGCGCGCGCAGCTGTGTGCATCGGAAGCGTGGGCTTCG ATGCCGCGTACAGCTACGCGGTCAGCTGGAGCTCGTCCGACTCGCCTGCA GCGCCCATGACCGATTGCGGTGCGGTGCAGGCCAGCGGCGCTGAGCAGCT CGTGCGCGTCAGCGGGCTCTCGCCTGCGACGACGTACTACCTGTTTGTGC GGGCCACGAACGCGGCGACGCAAGTTTGCAGCGTGATCAGCCAGAGCGCG CTGCTGAGAACCGGATCTGCGGCGGCGGTGGTGACGCAGGGCCCGACCCT GACGCCGACGGCAGCTGGCGACGGCTACTACGGCACCACGGTCGCAGTGG GGGCGCAGTACGCGGCGGTCAGCGCCAAGCTGATGACGGTCAACAACAAC GTCGGCGTCGGCGGAGTGTACGTGTACGCCTCGGTCGCCGGGGCGTGGCA GCAGGAGACCGTGCTGACCCCCGGCGACTGCCTGACCGGCGACGCGTTCG GAGGCCGTGCGGCGTTCGGCTCCGTCGCCCTCGCTGTGGACGGGGAGCGC ATCGCCGTCGGAGCGTACCTGAGGGATGCGGGACCGGTGTCGGGGTCGAA CTCGGGGGCCGTGTACGTGTTCGAAAAGGCGGCGGGAACTTGGCAGCAGA CGGTGCTGCCGAACCCCGACGCCGCCTCCAATGCCAACCTCGGCTACGCA GTCGCGATGCAGGGGGATTGGGTGTTCGGCAGTGCCCCGGGGAGCTCGTC CAGCACCGGCTCCGTCCTCATCTGGAAGGAAGACGCCGCCGCGGGGACGT GGTCCCGCGTGCAGGTGCTCACTCGAGCGGGGGCGGCTGCCTTCGATACA TTCGGGAAGGCTCTGGCGGTGTGCGGTGACGTGCTGGCCGTCGGCGCCTA CTGGGCCACGTCGAAGGGGTGCATCAGGGCGGGCGCGGTCGTCGTGTTCG AGCGGAACGTC
back to top

Coding sequence (CDS) from alignment at Contig_3:357874..362334+

>mRNA_51 ID=mRNA_51|Name=jgi.p|Trimin1|157641|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2679bp|location=Sequence derived from alignment at Contig_3:357874..362334+ (Tribonema minus UTEX_B_3156 )
ATGGTGAACGTGGCGCAGCTGCAGGCCGCCACCGGGGCTCAGAGCAGGTA
CGTCGCGGGGCTGATACCGGGCTCCGTGCAGTACCTGTACATCCGCGCCA
GGAACACCGGCACCGGAGAGTACACTGTGCTGAACGCGACGGGAGCGGAG
GTCGTGACGGCAGCGGCCAGGCCCGTCAACGAACGCGCGTACTTGACCGC
CAGTGACTTCAGCGATACCTCCATCGTCGCCAGCTACCTCGGCCCTGTCG
CCGTGAGCGGGAGCTACGCGATCCTGGGCGCGTACGGCAAGGATTCGCTG
GGCATCTCCAACGCCGGCGGCGCCTACGCATTCGAGCTGAACGCGACGAC
AGGAGCGTGGGAGGAGAAGGCGGTGCTGGAGACGCAGGGCTTTGCCTCGG
ATGCGGCCGGCAAGGCGGTGGCGATCAGCGGGACGTACGCCGCGGCGGGA
GCACCGAGCAGGCTGGCGGGGGGCATCGCGTACGTGTACGAGCGGAACGC
CGGCACCTCAGCGTGGCAGCAGAAGGCGGTGCTTCGAGCGAGCGACACGC
TGCCCGGCGACTCTTTCGGCGCCTCGATCGCCATGACGGGCACCTACTGC
TTCGTCGGGGCGAGCAACAGGTGGAGCAGGGGCACCGCCAGCGGGGGTGT
GTACGTCTTCCAGCGCAACGCCGGCAGCGGGGCGTGGGAGGAGGTCGCGA
TAGTCACGGCCAGCGACGAGACTGCGAGCTGCCAGTTCGGGGAGGCCGTC
GCCGCGGACGGGACGTACCTGATCGTCGGTTCCAGCGGGAAGGGCACTCT
CGGCAGCGCCTACGTGTTCGAGCGCGACGCCAGCACGGGAGTGTGGACGG
AGAAGGCCGTCCTGGTCCCGTCGGATTCGGTCGCCAATTCCAACACTTTC
GGGGAGAGCGTGGCGCTCAAGGGGTCGGTAGCCGTGGTGGGAGCTCCCAG
CAGGACGGGCAGCAGCGGGGTGTACGTGTACGAGCGCTCCGCCGGGGGGG
CGTGGCAGAGCAAGGCCGTGGTGACGGGGGTCAGCGGCGTGTTCACGGGT
CGCCTCGGAGGCAGCGTCGCCATCGACGGGGACTACCTCCTGGCGGGCGC
GGACACGACGGCCACTCAGCAGGGCGTGGCGTGCATATACAAGCGAAACA
CGACATCGGGGGTCTGGGAGGACAAGGGGTGGCTGACGGCATCGGACGCG
GCGATAAGCGACAAGCTGGGCTCGTACGTGGCGCTGTCGGGCCAGACCGC
CTTCGTCTCCTCCCCCTTCCACAGCGTCGCCGGGGTGCTCAACGCCGGCA
GGACGGTGGTGTACGACCTGCCCTCGCTGTCAGCGTCGCCGCCCGGGACC
GCGTCGCTGTCCCTCTCGAACAACGTGGGCACGGGTCAGTACACTTGCCT
CACGGCCACCGGGACGCAGCTGATCACGGCGAGCTCCCCCTCCTCAGGCT
ACGCTCTCCCCGAGCTCTTCGAGGACAGCGCTGGCGCTCACGGGGATAAG
TACGGCGGCAGCGTGGCGGCCAGTGGGAGTTGCGTTGCGATCGGAGCTCA
CGCCAAGGACAGGAACGGGAACGGCTTCTCGGTCGCTGCCGGGGGCGCGT
ACGTGTTCGAACGCGACGGGGCCGGCGCATGGACCCAGAAGACCAAGCTG
TTCGCCAGCGACGGATTGGCGGGCGACCTCTTCGGCTGCTCCGTCGGCGT
GAGTGGGCGCTATGCGGTCGTCGGCGCGTACAACAAGGCCCAGGGAGGCA
AAGCGCAGTGCGGCTGCGCGTACGTCTTCGAGCGAGACACCGGCACGGGT
GCCTGGAGCCAGAAGGCGGCGCTCTACCCGCCGCAGTTCGAGACCGCCAT
GCAGTTCGGCTACAGCGTTTCCATAAGGGGGGGTGTGATCGCGGTGGGCG
CGCCCGGCAAGAAGTGCGGGGAAGCGACGCTCGTCGGGGCCACGTACGTC
TTCACGCGCAACTCCACCTCGCAAGCCTGGGAGTACGTGACCGCGGTCAC
AGCGCCGGCAGGCGGGACCTCCGACTCGTTCGGCAAGGCGACGACGTGGA
CGAGCGCAGGCGAGCTCCTCGTGGGCGCGTCGACGGCCGGCCCGGGCGCA
CTTCAGAAGGGCAAGGCGTACGCGTTCGCGCCCTGCTCGCCCGCTCCGCC
CTCCTCCGTGACGCTGTCCCAGGAGACCGTGCTGACCCCCGGCGACTGCC
TGACCGGCGACGCGTTCGGAGGCCGTGCGGCGTTCGGCTCCGTCGCCCTC
GCTGTGGACGGGGAGCGCATCGCCGTCGGAGCGTACCTGAGGGATGCGGG
ACCGGTGTCGGGGTCGAACTCGGGGGCCGTGTACGTGTTCGAAAAGGCGG
CGGGAACTTGGCAGCAGACGGTGCTGCCGAACCCCGACGCCGCCTCCAAT
GCCAACCTCGGCTACGCAGTCGCGATGCAGGGGGATTGGGTGTTCGGCAG
TGCCCCGGGGAGCTCGTCCAGCACCGGCTCCGTCCTCATCTGGAAGGAAG
ACGCCGCCGCGGGGACGTGGTCCCGCGTGCAGGTGCTCACTCGAGCGGGG
GCGGCTGCCTTCGATACATTCGGGAAGGCTCTGGCGGTGTGCGGTGACGT
GCTGGCCGTCGGCGCCTACTGGGCCACGTCGAAGGGGTGCATCAGGGCGG
GCGCGGTCGTCGTGTTCGAGCGGAACGTC
back to top