mRNA_5088 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A835ZHD3_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHD3_9STRA) HSP 1 Score: 1051 bits (2719), Expect = 0.000e+0 Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 1 Query: 1 MTTAVFAHPLCLDDTFPVKGGSSFCTDSTSETYGSCCHSAQALQQRLFLYDHHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSSDSMYCYPYVESDATPSTTLEPFFKNLTLPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGGGELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHNGHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTFDATTDLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHLLNGPDAILYNPVYEYCHSDTAACASVVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEPGTGAWNAEPLVATTGWSISSLAEDRDRELYVIQYGVGANMYALPAKAT 1518 MTTAVFAHPLCLDDTFPVKGGSSFCTDSTSETYGSCCHSAQALQQRLFLYDHHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSSDSMYCYPYVESDATPSTTLEPFFKNLTLPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGGGELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHNGHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTFDATTDLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHLLNGPDAILYNPVYEYCHSDTAACASVVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEPGTGAWNAEPLVATTGWSISSLAEDRDRELYVIQYGVGANMYALPAKAT Sbjct: 1 MTTAVFAHPLCLDDTFPVKGGSSFCTDSTSETYGSCCHSAQALQQRLFLYDHHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSSDSMYCYPYVESDATPSTTLEPFFKNLTLPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGGGELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHNGHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTFDATTDLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHLLNGPDAILYNPVYEYCHSDTAACASVVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEPGTGAWNAEPLVATTGWSISSLAEDRDRELYVIQYGVGANMYALPAKAT 506
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A836CL62_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL62_9STRA) HSP 1 Score: 553 bits (1424), Expect = 1.040e-190 Identity = 273/506 (53.95%), Postives = 352/506 (69.57%), Query Frame = 1 Query: 19 AHPLCLDDTFP---VKGGSSFCTDSTSETYGSCCHSAQALQQRLFLYDHHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSSDSMYCYPYVESDATPSTTLEPFFKNLTLPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGG----GELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHNGHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTFDATTDLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHLLNGPDAILYNPVYEYCHSDTAACASVVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEPGTGAWNAEPLVATTGWSISSLAEDRDRELYVIQYGVGANMYALPAKA 1515 AHPLCLD+ P V+ +FCTD + GSCC + + + YD H LS AC PYQ +VACA+C+PFA H +A+G +GEVG+C FC Y AC D+ LP+DFCA+H++DS YC+PY+E PS TLEPFF+ +TLP + VG FMRPD + WW +DQ G+I EV +DP ATSMR +LDI RVNQG GELGLLGLAFSPDF+TTKR++INYV+N M +V+AR+ N +GN+E +L+ F QP +NHNGGTLLFK SDI + HY+ GGG +DP N Q+L + LGKILR+R+SS + +GF++P DN++++ G+ TL+YA GMRNPWKC+FD TD LYCGDVGQE EE D+I G NYGWSNYEGT N P P+YEYCH+ CA+V G CIIGGY+YRGSL++D Y +YI+ADY +S+LR + G ++A TGW ISSLA+D RELY ++YG G+N+YA+P A Sbjct: 15 AHPLCLDNACPSTAVQPALTFCTDVKANPNGSCCDATEERAVKAQYYDSHVLSNACEPYQRQVACASCDPFAVHLFASGNSGEVGFCSSFCASYFTACKADLGLPDDFCAVHATDSPYCFPYIEPAIPPSMTLEPFFQKITLPPQTVGVFMRPDTKAWWIIDQRGRILEVQNDPQATSMRTILDIQGRVNQGTNGAQGELGLLGLAFSPDFTTTKRYFINYVNNTMSSVVARYSLN-----SGNIETKLVTFKQPYQNHNGGTLLFKLSDI-----RAHYN-------GGGANDPKHNTQNLDSKLGKILRIRLSS--AGAGFTVPPDNVKNSKGETTLVYAYGMRNPWKCSFDWLTDDLYCGDVGQETREEIDVITRGANYGWSNYEGTQYNNSPSISYTKPLYEYCHTQ---CAAVSGSCIIGGYMYRGSLYADVYNGNYIYADYSAKSLLRMYT--GADGLKTSSVIAVTGWLISSLAQDNSRELYAVRYGDGSNLYAIPGSA 496
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A836CM86_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM86_9STRA) HSP 1 Score: 439 bits (1129), Expect = 8.220e-145 Identity = 240/536 (44.78%), Postives = 323/536 (60.26%), Query Frame = 1 Query: 13 VFAHPLCLDDTFPVKGG----SSFCT--DSTSETYGSCCHSAQALQQRLFLYDHHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLP--EDFCALHSSDSMYCYPYVESDATPSTTLEPFFKNLT-LPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGG----GELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHN-------------GHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTFDA---TTDLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHLLNGPDAILY-NPVYEYCHS--DTAACAS--VVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEPGTGAWNAEPLVATTGWSISSLAEDRDRELYVIQYGVGANMYALPAKAT 1518 V AHPLCL++ P + + FCT S S TYGSCC + A + Y LSAAC P+Q +VAC C+PFA H AG G +G C+GFC Y AC D+ +P +D+C H+++S +CYP V + STTL P+F +T LPS +VG FM+P WW + Q GKI EV + P A VLDI RV QGG GE+G+LGLAFSP F+TT FY+NY+D T IAR ++ L++HQP ENHNGGTLLF P ++E P H+ LYI TGDGGG++DP N Q L++ GK+LR+RISSD S + +++P DN + G+ + ++A G+RNPWKC+FD L+CGDVGQ+ +E+ + +G N GW NYE T L GP Y +P+Y YCH + + C GE + GG+ YRG+ +D YG YIFADY Q +LR +K+ +GAW +V +TGW+I SLAED + E+Y+++YG GAN+YALP +T Sbjct: 18 VAAHPLCLNNKAPSQAYQQELTDFCTVIKSKSNTYGSCCDAQGAADAKAANYAGLNLSAACKPFQEQVACGPCDPFAVHVMGAGSGGIMGMCRGFCESYWDACHTDLGMPSKQDYCDQHATESYWCYP-VNTKLASSTTLTPYFSKITDLPSMMVGMFMKPGSNKWWIIYQRGKILEVENSPDADYTHTVLDIQDRVIQGGDSGLGEMGMLGLAFSPTFATTGHFYVNYMDTGRNTNIARFTYDEASDAVDPDSETTAXXXXXXXXXXXFLKYHQPFENHNGGTLLFTPGELEQPNAPYHH-LYILTGDGGGENDPDNNAQDLSSKFGKVLRVRISSDPSTTSYTVPDDNP-TIQGQHSEVWAYGLRNPWKCSFDREKKNDPTLWCGDVGQDRIEKVTKVPMGANMGWRNYEATRLNTGPALDSYQHPLYMYCHDGVEDSQCQGKPFTGESVTGGFRYRGTQQADQYGGQYIFADYQQGRVLRLYKDD-SGAWQGSEVVQSTGWTIPSLAEDSNGEIYILRYGDGANVYALPNLST 549
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A835Z9U7_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U7_9STRA) HSP 1 Score: 441 bits (1135), Expect = 9.520e-144 Identity = 236/518 (45.56%), Postives = 315/518 (60.81%), Query Frame = 1 Query: 1 MTTAVFAHPLCLDDTFP----VKGGSSFCTDSTSETYGSCCHSAQALQQRLFLYDHHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSSDSMYCYPYVESDATPSTTLEPFFKNLTLPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGG----GELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHNGHMRG-TGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTFDATTDL-LYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHLLNGPDAILYNPVYEYCHSDTAA--CAS--VVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEPGTGAWNAEPLVATTGWSISSLAEDRDRELYVIQYGVGANMYALPAK 1512 + V AHP C+ D+ P ++G SFCT+ + YGSCC + Q Q + YD H LS AC P+Q +VAC C PF+ H Y N + C FC+ YV AC D+ LP D+C H+S YCYP + ++ + F NL LPS++VG F +P WW LDQSG I EV + P A VLD+T VN GG GELGLLGLAFSPDF TT FY+NYVD TVIAR + + G T + ++L F QP +NHNGGTLLF P D+ P G+ +YDLYI TGDGG ++P Q+ ++ LGK+LR+R+ + G++IP DN+++ ++A G RNP++C+FD D L+CGDVGQ+ VE+ G N+GW NYEGT ++YCHS + C G+C+IGGYVYRGS ++D YG +YIFADY Q I+R +++ G G W +E +V +TGW ISSLA+D + ELY+I+YG G N+Y LPAK Sbjct: 22 LAAGVDAHPSCISDSSPPSLDLRGQLSFCTEVINSQYGSCCDAGQENQAKAQYYDGHQLSDACKPFQQQVACGVCGPFSIHNYR---NQYLELCWDFCHDYVSACGNDLGLPADYCQTHASSDTYCYPVNDQLVKTASMNKYFNNNLNLPSRMVGMFPKPGSNKWWILDQSGSILEVDNSPDAGYTTRVLDLTGTVNTGGSGNIGELGLLGLAFSPDFQTTGYFYVNYVDWGRNTVIARFKFDSNNVGATAGTQVKILTFKQPYDNHNGGTLLFSPKDLSEPTGRSYYDLYIPTGDGGSGNNPEDTAQNRSSLLGKVLRIRL--PTNSDGYTIPDDNLQNE------VWAYGFRNPFRCSFDRAKDAELWCGDVGQDNVEKITRAIQGANHGWRNYEGTR-------------FQYCHSGVSGPWCDGKPFTGDCVIGGYVYRGSKYADVYGGNYIFADYQQGRIVRMYRQ-GDG-WQSEVIVQSTGWLISSLAQDSNGELYIIRYGNGGNVYELPAK 513
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A835ZA54_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA54_9STRA) HSP 1 Score: 405 bits (1040), Expect = 1.340e-130 Identity = 229/517 (44.29%), Postives = 303/517 (58.61%), Query Frame = 1 Query: 19 AHPLCLDDTFPV---KGGSSFCTD--STSETYGSCCHSAQALQQRLFLYD-HHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSSDSMYCYPYVESDATPSTTLEPFFKNL--TLPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGGGELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHN-GHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTFDATT---DLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHL--LNGPDAILYNPVYEYCHS-DTAACASV---VGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEP-GTGAWNAEPLVATTGWSISSLAEDRDRELYVIQYGVGANMYALPAK 1512 +HPLC DD+ PV K FCT GSCC++ Q + YD + +S CA Q +VAC+ C P+A H + G + CKGFC Y AC D+ LP +FC +H SDS YCYP +S A ST L P+F NL +P VG F+RPD WW LDQ+G I E+ +DP A + V+DI V G E+GLLGLAFSPDF T+KRFYI ++DN+M+ IA G + T + R+ +P NHNGG+L F P D P G+ +YDLY+S GDGG ++P + Q GKILRLR+S+D + ++IP DN R ++A G RNPW+C+FD L+CGDVGQ+ VE+ + G+N+GW N+EGT L PD P YEYCH+ D+ A ++ G+ + GGYVYRG +D YG YIFADY Q ILR FK GT N ++ATTG+ IS+LA+D D ELY++++G G +Y LP K Sbjct: 22 SHPLCEDDSSPVMALKAELKFCTHVKRAGNDKGSCCNAQQEAAVKATYYDIYPNMSEKCAKLQEQVACSTCEPYAVHLHPDGSELPI-MCKGFCKSYFDACKVDLGLPANFCEVHVSDSYYCYPVDDSIAGASTELTPYFNNLWKQMPQLPVGMFIRPDANKWWMLDQNGVILEIDNDPAADKVHTVIDINEEVMMYG-EMGLLGLAFSPDFKTSKRFYIYFIDNDMKATIAYLKWTPGDAKATADSMVRIFSLLKPYPNHNGGSLQFAPGDYLKPTGQAYYDLYVSVGDGGDANNPSNSAQKRGELFGKILRLRMSTDPAVKEYTIPDDNPRIKGKDPNEVFAYGFRNPWRCSFDKAKIEKPRLWCGDVGQDKVEKVTKVMKGENHGWRNFEGTRYNDLGSPDITFVQPEYEYCHAPDSDALCTLKPYTGQSVTGGYVYRGKSQADQYGGQYIFADYQQGLILRIFKNADGT---NDSDVIATTGFYISALAQDGDGELYIVKWGDGM-VYKLPDK 532
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A835YJB6_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJB6_9STRA) HSP 1 Score: 389 bits (998), Expect = 1.600e-120 Identity = 237/568 (41.73%), Postives = 313/568 (55.11%), Query Frame = 1 Query: 70 FCT------DSTSETYGSCCHSAQALQQRLFLYDHHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSSDSMYCYP-------------------YVESDATP---STTLEPFFKNLT---LPSKLVGAFMRPDLR--VWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGGGELGLLGLAFSPDFSTTKRFYINYVDNEM---ETVIARHVH-NGHMRGTGNVEA------------RLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMR-SNDGK--LTLIYALGMRNPWKCTFDATT----DLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHLLNGPDAILYN---PVYEYCHS------DTAACAS--VVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEPGTGAWNAEP------------------LVATTGWSISSLAEDRDRELYVIQY---GVGANMYALPA 1509 FCT + S+ G+CC + + LYD LS AC P QA+ AC C+PFA+H +G + C G+C KY AC D+ LP++FCA ++ D YCYP + A P ST L P+FK L+ +PS LVG + P + WW L+Q GKI EV +DP A VLD T RVN GGGE+GLLGLAFSPDF+ T FY+NYVD++ TV+AR+ + G + T + E +LL F QP NHN G LLF P+D P+ + +YDL+I+TGDGG DP N Q+ + LGKILR+R+S+D G+++P DN++ DGK LT YA G+RNPW+C+FD+ + DL +C DVGQ+ +E + G NYGW YEGT N PD +N PVY+YCH D C GECI GG+VYRG+ SD YG YIFAD+ +LR ++P G W + +V GW++SSLAED D ELYV++Y G AN+YALP+ Sbjct: 14 FCTIMMPDFTAASDVLGACCTADDESDVKRLLYDSKKLSDACKPLQAQYACGKCHPFAAHLALPDGSGILDMCSGWCGKYFNACKADLDLPDNFCA-NAGDGYYCYPDGVNATRPXXXXXXXXXXXXAAAKAPPPSTSTKLPPYFKKLSGGQIPSHLVGLHIVPGSKNKKWWMLNQDGKIVEVDNDPEAEDTTTVLDATDRVNSGGGEVGLLGLAFSPDFTKTGYFYVNYVDDDEPLPNTVVARYTYVEGDKQATHDSEVXXXXXXXXXXXXKLLTFQQPFLNHNAGQLLFSPADKAKPDNQPYYDLFIATGDGGSFSDPDGNAQNKGSLLGKILRIRLSTDPKAKGYTLPPDNIKVKKDGKEQLTEAYAYGLRNPWRCSFDSKSLDKLDL-WCADVGQDRIERIVRVKAGGNYGWRKYEGTRD-NIPDDDAFNFTPPVYQYCHQGEAGEDDDPICKDKPFTGECITGGFVYRGAKQSDVYGGQYIFADWQAHRLLRLIRQPD-GGWRGDAXXXXXXXXXXXXXXXXXVIVDELGWTVSSLAEDDDGELYVLRYDSSGSAANVYALPS 577
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A836CJ59_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ59_9STRA) HSP 1 Score: 340 bits (872), Expect = 3.650e-107 Identity = 204/534 (38.20%), Postives = 287/534 (53.75%), Query Frame = 1 Query: 13 VFAHPLCLDDTFPVKG---GSSFCTD---STSETYGSCCHSAQALQQRLFLYDHHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSSDSMYCYPYVESDATPSTTLEPFFKNLT---LPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGG------GELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHNGHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTFDA---TTDLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHLLNGPDAIL--YNPVYEYCHS--DTAACAS----------VVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEPGTGAWNAEPLVATTGWSISSLAEDRDRELYVIQYGVGANMYALPAKAT 1518 V AHPLCL+++ P K SFCT+ +++ + GSCC ++ + YD +TLS AC P Q +VAC CNPF++H + G M + DFC S STTL+ +F L+ L ++ G FM P R WW+++Q G+I EV + P A+S++ VLDI+ RV QGG GELGLLGLAFSPDF T FY+NYVD T ++R H+ H +G + + S++ + +Y LYI TGDGG DP + Q L + LGKI+R+RIS+D + ++ P DN S G +T YA G+RNPWKCTF+ + D ++CGDVGQ+ VE+ I G N+GW+ YEGT + P A PV+EYCHS D C + + G+ + GG+VY G+ +D Y YI+ADY Q I R + + +G W +V + GW+I++LAED D E+Y+++YG A +YALP K T Sbjct: 18 VRAHPLCLNESSPSKTFQQSLSFCTEVQSTSANSNGSCCDASAEADVKKKYYDIYTLSEACKPLQEQVACGTCNPFSAHLFDDGTG-------------------IMMMTTDFCNKLKS---------------STTLKAYFTKLSSNQLGTQPTGMFMNPKNRKWWYINQRGQIHEVDNSPTASSVKTVLDISGRVTQGGRNGGGQGELGLLGLAFSPDFVNTGFFYVNYVDKSFNTNVSRFKHS-HEKGVADPNSET-------------------SELAKTTNQPYYHLYIVTGDGGSAFDPQNHAQDLNSRLGKIMRVRISTDAGTNSYTTPPDNP-SIKGSVTRNYAYGLRNPWKCTFNRANKSADEIWCGDVGQDHVEKVIKIKAGGNHGWNYYEGTRQVRSPPANFDYVKPVFEYCHSNEDITQCKTKDSSGKTVYKMTGQSVTGGFVYSGTRQNDQYAGQYIYADYQQGRIARLYYDSASGTWKNSVIVQSAGWTITALAEDLDGEIYIMRYGDSAQVYALPDKQT 496
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A835YRR0_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRR0_9STRA) HSP 1 Score: 290 bits (741), Expect = 2.530e-88 Identity = 178/447 (39.82%), Postives = 255/447 (57.05%), Query Frame = 1 Query: 268 CKGFCNKYVKACAKDMQLPEDFCALHSS--DSMYCYPYVESDATPSTTLEPFFKNLT--LPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGGGELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHNG-HMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHR---NGQSLTTNLGKILRLRISSDVSESG---FSIPADN-------MRSNDGKLTLIYALGMRNPWKCTFDATTDLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHL----LNGPDAILYNP----VYEYCHSD-------------TAACAS--VVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFK-EPGTGAWNAEPLVATTGW--SISSLAEDRDRELYVIQY 1476 C+GFC +++ C + +P D+C +HS D+ YCYPYV P + F L P + G + P + WW ++Q+G I++ P+DP A ++ V DI + GELGLLGLAF P+F+ FY+NYV+ M TVIAR+ ++ T N E LL + QP NHNGG L F PSD+ P+ K ++DL+I+TGDGGG DD H N Q L++ +GKI+R+RI++ + +SIPADN + + L +YA GMRNPW+C+FD + L+CGDVGQ++VEE +I+ G+NYGW +YEGT L P+ P VY+YCH+D AAC + V+G + GG+VYRG+ + G +YIFADY ++ +L A + + T W + L T IS+ AED D EL ++ Y Sbjct: 4 CQGFCTQFLNECGASLMMPPDYCNVHSQKPDATYCYPYVP----PGKVMPSAFPLLDPQYPGLMNGLQLVPGGQAWWLVNQAGVIWQFPNDPTAAALTKVFDIVEKT-LFSGELGLLGLAFHPNFAANGAFYVNYVNLGMATVIARYTYDAADPVATVNSEQVLLTWLQPEANHNGGWLGFSPSDMATPQ-KAYHDLFIATGDGGGADDNHGLFGNAQDLSSYMGKIMRVRITAAQAVGVAPVYSIPADNPFVGAAPVPGQNVPLPEVYAYGMRNPWRCSFDPQ-ERLWCGDVGQDSVEEINIVEAGENYGWRSYEGTRCNLAALAFPNTGCRQPYTPPVYQYCHADYQLEPKPGQAAYARAACKNQKVMGRSVTGGFVYRGAALAAELGSAYIFADY-EDRVLAAIRYDDATATWTEQILADGTNGLGQISTFAEDADGELLLVSY 442
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A836CDA7_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDA7_9STRA) HSP 1 Score: 265 bits (676), Expect = 3.440e-77 Identity = 174/438 (39.73%), Postives = 231/438 (52.74%), Query Frame = 1 Query: 19 AHPLCLDDTFPVKGGSS----FCTDSTSETYGSCCHSAQALQQRLFLYDHHTLSAACAPYQAKVACAACNPFASHAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSS--DSMYCYPY----------VESDATPSTTLEPFFKNLT--LPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLATSMRLVLDITSRVNQGGGELGLLGLAFSPDFSTTKRFYINYVDNEMETVIARHVHN-GHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSDVSESG-----FSIPADNMRSND--GKLT----LIYALGMRNPWKCTFDATTDLLYCGDVGQEAVEEFDIIYIGQNYGWSNYEGTHLLNG-PDA---ILYN-PVYEYCHS 1227 +HPLC D T P+ GG + FCT G CC Q R +D +AA P C G + C+ FC +Y ACA + LP DFCA S D+ YCYPY V A P LEP F L LP +L G +RPD WW L+Q+G + E+ +DP A +LD++ R GG ELGLLGLAF P+F+ FY+ Y+ + M TV+AR H G T EARL + Q +NH G + F +D+ PE H DLY+STGDGGG +DP+ N Q+ + GK+LR+RI+ + + F IP DN +N G+ ++YA G+RNPW+C+FD TD L+CGDVGQ+ VEE D I G NYGW ++EG G PD + Y+ P+++YCHS Sbjct: 22 SHPLCSDFTTPLLGGDAPAYEFCTALNGNPDGGCCTLEQEDGVRA-RFDEAVAAAARPPSDQ------CKAMLMEVL--GPEDGMMLCRDFCQRYHDACAAALALPADFCAARSRAPDAFYCYPYAPRAWAAANHVADPAQPQ--LEPAFPLLQGRLP-QLTGMVLRPDADAWWLLEQTGVVHELQNDPGAADFMQILDVSDRTTSGG-ELGLLGLAFHPNFAANGAFYVAYIGDPMATVVARFAHMPGDPEATAASEARLFVWPQAFQNHKAGWMAFTHADMAAPERPSH-DLYMSTGDGGGGNDPNGNAQNPASPFGKMLRMRITQAHATAAAGAPLFEIPPDNPFANAAAGQQAALPGIVYARGLRNPWRCSFDRGTDALWCGDVGQDNVEEIDTIVKGGNYGWRDHEGERCNWGAPDFNCDLKYDAPLFQYCHS 445
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Match: A0A835ZBG7_9STRA (GSDH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG7_9STRA) HSP 1 Score: 248 bits (632), Expect = 2.450e-69 Identity = 184/561 (32.80%), Postives = 268/561 (47.77%), Query Frame = 1 Query: 25 PLCLDDTFPVKGGSS---FCTDSTSETYGSCCHSAQALQQRLFLYDHHT----LSAACAPYQAKVACAACNPFAS-HAYAAGVNGEVGYCKGFCNKYVKACAKDMQLPEDFCALHSSDSMYCYPYVESDATPSTTLEPFFK--------------------------NLTLPSKLVGAFMRPDLRVWWFLDQSGKIFEVPHDPLAT--SMRLVLDITSRVNQGGGELGLLGLAFSPDFSTTKRFYINYV---DNEMETVIARHVHNGHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGG--------GDDDPHRNGQSLTTNLGKILRLRISSDVSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTF------DATTDLLY-CGDVGQEA---VEEFDIIYI-----------GQNYGWSNYEGTHLLNGPDAIL----YNPVYEYCHS-DTAACAS---VVGECIIGGYVYRGSLHSDTYGVSYIFADYMQESILRAFKEPGTGAWNAEPLVA---TTGWSISSLAEDRDRELYVI 1470 P C D T P ++ FC+ + G+CC++ + Q + LYD ++ LSA C PYQ ++AC C P + AGV + FC Y AC +D+ LP D+C+ HS D++ P E + P EP + N+ +P+ +GA+ P WWF G I + P++P A ++ VLDI RV GELGL GLAFSPD+S TK FY++Y+ + +T I+R T E +L F H GG +LF+P+DI + K +++YI TGDG G +D + GQ++T+ LGKILR+ I D + + P+ N++ ++G L L +A G RNPWK A D+++ CG Q V +F Y+ N+GW YEGT N A+ P YE CHS DT+ +CIIGG+VYRG+ S Y +Y+FAD+ I R +K+ G + A +V G ++ LAE + ELYV+ Sbjct: 272 PSCADGTIPSTEKAAQLTFCS-APELVAGACCNAGEEQQFKAQLYDVYSHRQGLSAECEPYQRRLACGKCYPSGEDNLLPAGVGEPLLLSAAFCKAYAAACGEDLHLPTDYCSTHSFDAVE--PDAELEDLPVDQPEPEVQDHPPALAISASRDLAAVNPVSYYSDANVNIPAMPIGAYQNPVTNAWWFAGHEGVISKAPNNPQAAPGDVKTVLDIKDRVTFNSGELGLNGLAFSPDYSVTKFFYVSYIHISNGNYQTYISRFTDKSDAASTKGTEKVILTFDTLGLYHKGGQILFEPADIANFANKSGFNMYIPTGDGAQVPPGATDGFNDKYNRGQTITSPLGKILRIFIKPDGT---YYKPSGNLKDSNGNLQLAWAYGFRNPWKWRLLRQVYIGAAADVVWRCGREQQRGGMYVCDFTCTYMQYTLQVDKVEPNGNHGWRVYEGTRYTNLEPALADSANVKPAYEVCHSSDTSGTCQGKPFTSDCIIGGFVYRGTKQS--YVGNYVFADFSGSRIARLYKD-SVGKYQATTIVTWDKAKGLPVA-LAEALNGELYVV 822 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174744 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5088 ID=mRNA_5088|Name=jgi.p|Trimin1|174744|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1521bp|location=Sequence derived from alignment at Contig_117:276205..277725- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACGACCGCAGTGTTTGCACACCCGCTCTGTCTGGACGACACTTTCCCback to top protein sequence of jgi.p|Trimin1|174744 >Trimin1|174744|e_gw1.117.62.1 ID=Trimin1|174744|e_gw1.117.62.1|Name=jgi.p|Trimin1|174744|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=507bp MTTAVFAHPLCLDDTFPVKGGSSFCTDSTSETYGSCCHSAQALQQRLFLYback to top mRNA from alignment at Contig_117:276205..277725- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5088 ID=mRNA_5088|Name=jgi.p|Trimin1|174744|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1521bp|location=Sequence derived from alignment at Contig_117:276205..277725- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_117:276205..277725- >mRNA_5088 ID=mRNA_5088|Name=jgi.p|Trimin1|174744|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1521bp|location=Sequence derived from alignment at Contig_117:276205..277725- (Tribonema minus UTEX_B_3156 )back to top |