mRNA_4976 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: A0A836CGT5_9STRA (P4Hc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT5_9STRA) HSP 1 Score: 887 bits (2293), Expect = 0.000e+0 Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 1
Query: 1 MRSLLLSLCLVATIGFAKVHRHPDEVFLAFENEPIQAKNGMAINSFRGHSFVAHKADRTLTHFDPDTDASPDAVFFTMSDWGDTITLTSNKDGSLALTQMNSYLQVKDQMAAAADKCKRKRNLKDDTAVLDKHLLKCISDIMAKQVAPLRQCTVXXXXXXXXXXXXXXLDKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKWSGHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVAGQTQRDKSAARRAMAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKYDTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQGRPLRREEWDDPVDEDSXXXXXXXXXXXXEPADDEYWDEXXXXXXQEL 1425
MRSLLLSLCLVATIGFAKVHRHPDEVFLAFENEPIQAKNGMAINSFRGHSFVAHKADRTLTHFDPDTDASPDAVFFTMSDWGDTITLTSNKDGSLALTQMNSYLQVKDQMAAAADKCKRKRNLKDDTAVLDKHLLKCISDIMAKQVAPLRQCTVXXXXXXXXXXXXXXLDKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKWSGHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVAGQTQRDKSAARRAMAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKYDTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQGRPLRREEWDDPVDEDSXXXXXXXXXXXXEPADDEYWDEXXXXXXQEL
Sbjct: 1 MRSLLLSLCLVATIGFAKVHRHPDEVFLAFENEPIQAKNGMAINSFRGHSFVAHKADRTLTHFDPDTDASPDAVFFTMSDWGDTITLTSNKDGSLALTQMNSYLQVKDQMAAAADKCKRKRNLKDDTAVLDKHLLKCISDIMAKQVAPLRQCTVXXXXXXXXXXXXXXLDKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKWSGHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVAGQTQRDKSAARRAMAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKYDTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQGRPLRREEWDDPVDEDSXXXXXXXXXXXXEPADDEYWDEXXXXXXQEL 475
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: A0A835YYR1_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR1_9STRA) HSP 1 Score: 475 bits (1223), Expect = 7.800e-161 Identity = 252/484 (52.07%), Postives = 306/484 (63.22%), Query Frame = 1
Query: 49 AKVHRHPDEVFLAFENE------------------------PIQAKNGMAINSFRGHSFVAHKADRTLTHFDPDTDASPDAVFFTMSDWGDTITLTSNK-DGSLALTQMNSYLQVKDQMAAAADKCKRKRNLKDDTAVLDKHLLKCISDIMAKQVAPLRQCTVXXXXXXXXXXXXXXLDKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKWSGHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTL------------------------------------EAATVAGQTQRDKSAARRAMAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKYDTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQGRPLRREEWDDP 1317
A HR P+ V L F NE PIQ K+G+ ++SF+GHSFVA + +TH+DP D SP AV FTMS W DT+T+TSN DGSL L Q NS+ +V M AAA+ CKRK K+ A+LDK LL C+S+++A +VAP D EL+KQ KMM+ VG+R+RNYTC+DP+M+TTE LRT W G VFLEE DS+I+L+DNF S+AECDALIAAGT TL E ATV G T D S +RRA AG+A P S G+DP+TDLYRR Y+FANDQTGY M ++GQE FSVIKYD TDEYI HCDG C G PYK GGR+ATMV+YC AA+ GGGTTF+NVDVF+ GK+GQA FF+YYD E+ D+GRTRHSGCP+I GTKWIATLWMR GVSK+ + FDP+GRP+ +EW P
Sbjct: 20 AAEHRSPNAVSLQFNNEADVPVTLNWLNTFKGNKLIPQRDVPIQPKHGLGVDSFKGHSFVAVSTEVNMTHYDPINDRSPSAVHFTMSPWDDTVTITSNPYDGSLELHQTNSFKKVGASMEAAAEACKRKHKRKNAEALLDKELLDCMSNMLATEVAP----KASHRCRKLKFIGYFEEDHELAKQRKMMDIVGDRLRNYTCVDPQMKTTEKALRTITWDGRKASVFLEEPDSKIILVDNFASEAECDALIAAGTRTLTTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVATVNGATGADLSISRRAKAGVASPKLSLAEGEDPITDLYRRGYRFANDQTGYDMPLDGQEKFSVIKYDATDEYIPHCDGDCTGAPYKPGGRIATMVVYCGAAEFGGGTTFSNVDVFINGKRGQAAFFAYYDKERNVTDSGRTRHSGCPIISGTKWIATLWMRNGVSKAKSYMHFDPEGRPVT-DEWHKP 498
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: A0A6H5L771_9PHAE (P4Hc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L771_9PHAE) HSP 1 Score: 276 bits (706), Expect = 3.230e-83 Identity = 162/415 (39.04%), Postives = 229/415 (55.18%), Query Frame = 1
Query: 91 ENEPIQAKNGMAINSFRGHSF--VAHKADRTLTHFDPDTDASPDAVFFTMSDWGDTITLTSNKDGSLALTQMNSYLQVKDQMAAAADKCKRKRNLKDDTAVLDKHLLKCISDIMA------KQVAPLRQCTVXXXXXXXXXXXXXXLDKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKWSG------HAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVAGQTQRDK-SAARRAMAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKYDTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQGRP 1290
+ EPI + ++S+ GHSF V + LT++ P+ FTM ++ +T++ + +G+L ++ + M A+ +C++ + TA S +A + V +C + E +K +M+ VG+R RNYTC DPKM+TT L + +W + +VFL++ ++I L+DNF +D EC AL+ + L+ ATV G + S ARRA AG + + K + LYRR Y FAN TGY + ++GQE FSVIKY + DEY HCDG C G ++ GGRVATMV+YCE A GGGTTF++ DVF+ GKKGQA FFSY + + D GRTRHSGCP+IEGTKWIATLWMR GV+ W+ +DP G P
Sbjct: 56 KEEPIVPNGSLNVDSYYGHSFLVVDDQHAEGLTNYKPELWNPKIMAMFTMGEFDLEVTVSRDANGNLVHVAESAMTRTTRLMETASKECRQSPEVVKATAKRKGLAAAEGSCTIAGAQGENEMVPEFAECLTKAIAQDLAKK-----ETEANKSMRMLEVVGDRARNYTCADPKMDTTNSSLPSVQWKDPEGGLTYNAQVFLDDPAAKIYLLDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSNARRAKAGGVGADLNNK--NSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKKGQAAFFSYLGPDN-KTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQYYDPSGLP 462
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: A0A7S1GMS7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMS7_CYCTE) HSP 1 Score: 218 bits (554), Expect = 3.620e-62 Identity = 129/355 (36.34%), Postives = 192/355 (54.08%), Query Frame = 1
Query: 274 DGSLALTQMNSYLQVKDQMAAAADKCK----RKRNLKDDTAVLDKHLLKCISDIMAKQVAPLRQCTVXXXXXXXXXXXXXXLDKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKW-----SGHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVA-GQTQRDKSAARRAM-AGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKY------DTT-DEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQG 1284
D + L + + +D ++ D CK ++ N K + + + + + +C+SD++ ++ + E+S Q ++ ++GE NYTC DP + ++ L TT + S H VKV L+ S+I +++NF+SDA+C+A+ AA L A VA G D S RRA+ AGI GD P+ + R+ Y + N TG+ + +GQE+ I+Y DT D+Y HCDG C G P+K G RVAT+VMYC A+ GG T F N V V GK+G AVFFSY DS+ +D+G T HSGCPV+ G K I T W+R GV++ +PW R++ G
Sbjct: 50 DRNFQLVHEDHKSKARDHASSLLDDCKLLAIQRLNAKMEPSAVLEDVAECMSDMVTQEFTGIAD--------------------EISFQAQVRKKMGEHYENYTCADPSLPSSPAELNTTWYDKRTRSTHPVKVMLDRPASKIHVVENFISDAQCNAMEAAANGRLMKAVVADGSGGHDLSDHRRALQAGIRVKWEKENEGD-PIATISRKVYDYVNHVTGFNIDEKGQEDLMSIQYFGRGLDDTEPDQYKPHCDGECTGDPHKNGTRVATIVMYCTVAEVGGATNFRNAGVHVNGKRGSAVFFSYMDSDTHIMDSGFTEHSGCPVLVGEKKIVTQWVRHGVTEEIPWNRYNSLG 383
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: A0A1Z5JAZ8_FISSO (Prolyl 4-hydroxylase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAZ8_FISSO) HSP 1 Score: 203 bits (516), Expect = 2.900e-56 Identity = 111/269 (41.26%), Postives = 154/269 (57.25%), Query Frame = 1
Query: 505 LDKELSKQYKMMNEVGERVRNYTCIDPKMETTEP-PLRTTKWSGHA--VKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVAGQTQRDKSAARRA--MAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKY-------DTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFD 1275
+D++LS Q ++ ++ NYTC DP ET EP RT ++ G + V V SQI ++ +F+S EC+A+ A TL TVA K + R AG+ + A+ +DP+ + +R + +AN+ TGY+M + GQE+ I+Y T D Y HCDG CNG P+K GGRVATMVMYC+ + GG T F + +V+VK K G A FFSY + + + G T HSGCPV+ GTK IA WMR GV+ PW+ FD
Sbjct: 191 MDEKLSVQASVLKQISTLAENYTCADPLKETNEPIEERTWEYEGVSRNVGVLHNRPSSQIHVLHDFISAEECEAIRKAAEPTLHRGTVADGAGGSKLSENRKAWQAGV---TYDAENPNDPILMVKKRLFAYANNVTGYEMELPGQEDLMSIQYFGSGVDNPTPDRYTPHCDGECNGFPHKKGGRVATMVMYCDVPELGGATNFQHANVYVKPKVGAAAFFSYLNPTTRKSEEGFTTHSGCPVLLGTKRIAVQWMRIGVTSDEPWDSFD 456
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: A0A7S2UY63_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY63_9STRA) HSP 1 Score: 201 bits (511), Expect = 2.320e-55 Identity = 144/461 (31.24%), Postives = 218/461 (47.29%), Query Frame = 1
Query: 79 FLAFENEPIQAKNGMAINSFRGHSFVAHKADRTLTHFDPDTDASPDAVFFTMSDWGDTITLTSNKDGSL-ALTQMNSYLQVKDQMAAAADKCKR------------------------KRNLKDDTAVLDKHLLKCISDIMAKQVAPLRQCTVXXXXXXXXXXXXXXLDKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLR-------------TTK---WSGHA-------VKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVAGQTQRDKSAARRAM-AGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKYDTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYY--------DSEKER--VDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQG 1284
F+ + P++ I+S+ GHSF+ + T P +++ FT+ +T+T+N + L L + Q++D+MA D C++ +R + A +H CI +M++++ ++ +E S ++ + R+R+Y C DP ET++ R T K W G V L++ +++ML+ +++S+ EC I L ATVAG+T + + RRAM AGI + ++P T + R + FA+D G + + QE F+VI+Y DEY HCD GC G Y GGRVATMVMYC+ A GGGTTF N ++FV+ + GQA FFSY S KE +D+G T HSGCP+ EG KWI TLWMR GVS+ + DP+G
Sbjct: 52 FIRQTSLPVRNGTDSYIDSYMGHSFIVVVSGET-----PKMNSNQPT--FTLGTLDTVVTVTTNPENQLMTLVLITEKTQLEDKMAEILDYCRQEAIERFPEPRQGMEVNAGGEVVNNRRGVLLSRANAAQH---CIKVLMSEELVEVK--------------------REESFMKELQLAMANRLRDYQCADPTAETSQAVSRSYWRHAVIKDSKGTMKPKGWGGRRRGFDGVHVDTLLDQERARMMLVHDWISEEECQYFIDQAKPKLHKATVAGRTLQAQDPGRRAMQAGIL---YDWDDPENPATRVANRTFAFASDALGIEFPLRYQEQFTVIQYGVDDEYRPHCDAGCTGEEYLPGGRVATMVMYCQTATKGGGTTFTNANIFVQPQPGQASFFSYLGPPADGNSSSVKENRIMDDGLTEHSGCPIYEGEKWIVTLWMRLGVSEGHSADMVDPRG 479
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: A0A7S3LDH7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDH7_9STRA) HSP 1 Score: 197 bits (502), Expect = 2.450e-54 Identity = 136/408 (33.33%), Postives = 196/408 (48.04%), Query Frame = 1
Query: 127 INSFRGHSFVAHKADRTLTHFDPDTDASPDAVFFTMSDWGDTITLTSNKDGSLALTQMNSYLQVKDQMAAA--------------ADKCKRKRNLKDDTAVLDKHLLKCISDIMAKQVAPLRQCTVXXXXXXXXXXXXXXLDKELSKQYKMMNEVGERVRNYTCIDPKMETTEP-PLRTTKWSG--HAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVA-GQTQRDKSAARRAMAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKY-------DTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFD 1275
INSF H+FV + +L D + ++ ++D D I + KDG + M L+ AA A++ +K+NL +V+ + L +C++ A+ + EL + + E+ NYTC DP E + P ++T G V + E SQI ++ +F+S EC A+ L TVA G+ S R+A + + S + DP+ ++ RR + +AN GY M VEGQE+ I+Y T D Y+ HCDG C+G P+K GGRVATMVMYC+ + GG T F N VFVK KG A FFSY + E ++G T HSGCPV++GTK IA WMR GV ++ PW+ FD
Sbjct: 67 INSFVNHTFVIRSEEASLG------DENCTEEYYQVTD--DEIQILIVKDGLVVEQSMIHDLKPSSGKAAKESEQVDFTSDCRKQAERALKKKNLPQ--SVIFERLTECLTQNAAELIVEKSD--------------------ELVLEANLRVEMSRLAENYTCADPTKEVSTPIAIKTWNHKGVDREVHILHERPGSQIHMLKDFISAEECQAIQDLAEPLLHRGTVADGKGGSKMSENRKAWQAGLKVDWSKEAEGDPLANVKRRLFDYANQAAGYSMQVEGQEDVMSIQYFGNGLDDPTPDRYMPHCDGQCDGLPFKTGGRVATMVMYCDVPEVGGATNFQNAGVFVKPVKGAAAFFSYLNPETMVTESGFTTHSGCPVLQGTKRIAVQWMRIGVDENNPWDSFD 444
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: A0A7S1CZK9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZK9_CYCTE) HSP 1 Score: 196 bits (499), Expect = 9.360e-54 Identity = 111/273 (40.66%), Postives = 157/273 (57.51%), Query Frame = 1
Query: 511 KELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKW------SGHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVA-GQTQRDKSAARRAM-AGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKY-------DTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQG 1284
+E++ Q ++ ++ E+ YTC D ++ ++ + T W S H V+V L+ S++ LI+NF+SDA+CDA+ A L+ A VA G D S RRAM AGI K GD + + R+ Y + N TG + +GQE+ I+Y ++ D+Y+ HCDG C G P+K G RVAT+VMYC + GG T F N + V K+GQAVFFSY D E +D G T HSGCPV+ G K I T W+R GV++ VPW R++ G
Sbjct: 192 EEIAFQSQVRKKMAEQYETYTCADFELPSSVAEVNET-WHDSRTRSSHLVQVMLDRPASKVHLIENFISDAQCDAMEEAANGRLQRAVVADGAGGHDFSEHRRAMQAGIHVQWDKEKSGDH-IAAISRKVYDYVNHVTGLNIDEKGQEDLMSIQYFGKGLEDNSPDQYMPHCDGECTGDPHKHGTRVATIVMYCTVPEKGGATNFRNSGIHVVPKRGQAVFFSYMDPETNLMDTGFTEHSGCPVVFGEKKIVTQWVRHGVTEEVPWYRYNSLG 462
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: A0A7S3XMW1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMW1_HETAK) HSP 1 Score: 190 bits (482), Expect = 3.570e-53 Identity = 110/250 (44.00%), Postives = 137/250 (54.80%), Query Frame = 1
Query: 559 VRNYTCIDPKMETTEPPLRTTKWSGHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVAGQTQRDKSAARRAMAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVE----GQENFSVIKYDTT-DEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKK-GQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQGRP 1290
+R Y C + T PP R +++ G V+ + +++ L+ EC AL+ L ATVAG T +D+ RRA + + S + DPV L RRAY FA+ G + GQE FSVI+Y DEY HCD C GG K GGRVATMV+YCE AGG TTF N + V + G A FFSY + E D+G T HSGCP+ EG KWIATLWMR+GVS PW FDP G P
Sbjct: 49 LREYACANASA-ATPPPARRSQFQGVQVETLFDHQRARVDLLHGLAQAEECRALVDRAAPRLRRATVAGATLQDEDIGRRADQATVDYDWSDEV--DPVARLARRAYAFADSALGPRRGAPLPRGGQEGFSVIRYRPGGDEYRPHCDSDCEGGLAKDGGRVATMVIYCEVPAAGGATTFDNAALTVVPESAGDATFFSYIGDDGE-WDDGLTLHSGCPIKEGEKWIATLWMRQGVSDEAPWSSFDPAGNP 294
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Match: B7FW42_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW42_PHATC) HSP 1 Score: 192 bits (487), Expect = 1.570e-52 Identity = 106/269 (39.41%), Postives = 150/269 (55.76%), Query Frame = 1
Query: 508 DKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKW-----SGHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATVA-GQTQRDKSAARRAMAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKY-------DTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFD 1275
++EL+ Q ++ ++ N+TC DP M TT P+ W V+V SQI +++ F+S EC A+ A L TVA G+ S +R+A ++S K + ++DL +R + + N+ TG+ M ++GQE+ I+Y T D Y HCDG CNG P+K GGRVATMVMYC+ + GGGT F + +VFV G A FFSY +++ + G T HSGCPV+EGTK IA WMR GV + PW+ FD
Sbjct: 137 NEELAFQAQVREQISALAENHTCADP-MRTTTEPIEMRSWRYLDEDPRTVQVLHNRPSSQIHVLEGFISPEECQAIKDAAAPKLHRGTVADGKGGSKLSESRKAWQAGVGVDYSHK---NAISDLKKRLFAYTNEVTGFNMNLDGQEDIMSIQYFGDGVGNPTPDRYTPHCDGECNGMPHKRGGRVATMVMYCDIPEIGGGTNFQHSNVFVAPTIGAAAFFSYMNNDTGLHETGFTTHSGCPVLEGTKRIAVQWMRVGVDEDSPWDSFD 401 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348401 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4976 ID=mRNA_4976|Name=jgi.p|Trimin1|348401|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1428bp|location=Sequence derived from alignment at Contig_23:1054842..1068122- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCGGAGCCTGCTACTGTCTCTGTGCCTGGTTGCCACCATCGGCTTCGCback to top protein sequence of jgi.p|Trimin1|348401 >Trimin1|348401|estExt_Genemark1.C_Ctg_230117 ID=Trimin1|348401|estExt_Genemark1.C_Ctg_230117|Name=jgi.p|Trimin1|348401|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=476bp MRSLLLSLCLVATIGFAKVHRHPDEVFLAFENEPIQAKNGMAINSFRGHSback to top mRNA from alignment at Contig_23:1054842..1068122- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4976 ID=mRNA_4976|Name=jgi.p|Trimin1|348401|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13281bp|location=Sequence derived from alignment at Contig_23:1054842..1068122- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_23:1054842..1068122- >mRNA_4976 ID=mRNA_4976|Name=jgi.p|Trimin1|348401|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1428bp|location=Sequence derived from alignment at Contig_23:1054842..1068122- (Tribonema minus UTEX_B_3156 )back to top |