mRNA_486 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A836CEA1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA1_9STRA) HSP 1 Score: 380 bits (975), Expect = 1.520e-133 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1 Query: 1 FIQANVNRRQQELNPDVQPDEVVYINVPSNMDTSFDMPPLYKAAFYPSVESSQVRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPCRPVQQLTLTSEQLLDWYLNMLEMRCMRVGISTR 552 FIQANVNRRQQELNPDVQPDEVVYINVPSNMDTSFDMPPLYKAAFYPSVESSQVRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPCRPVQQLTLTSEQLLDWYLNMLEMRCMRVGISTR Sbjct: 1 FIQANVNRRQQELNPDVQPDEVVYINVPSNMDTSFDMPPLYKAAFYPSVESSQVRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPCRPVQQLTLTSEQLLDWYLNMLEMRCMRVGISTR 184
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A835Z6R2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R2_9STRA) HSP 1 Score: 290 bits (742), Expect = 2.220e-92 Identity = 140/154 (90.91%), Postives = 144/154 (93.51%), Query Frame = 1 Query: 91 MDTSFDMPPLYKAAFYPSVESSQVRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPCRPVQQLTLTSEQLLDWYLNMLEMRCMRVGISTR 552 M TSFDMP LYKAA YP ESSQVRYTSKTVCAYQM DGQPVLVLVLFCQEYG+DTVEANKGRVYIAYLDTAAFL PVKARS+V+K+VLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPCRPVQQLTLTSEQLL WYLNMLE RCMRVGI TR Sbjct: 1 MGTSFDMPRLYKAALYPLAESSQVRYTSKTVCAYQMVDGQPVLVLVLFCQEYGLDTVEANKGRVYIAYLDTAAFLSPVKARSSVHKEVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPCRPVQQLTLTSEQLLGWYLNMLETRCMRVGIRTR 154
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A835Z6P2_9STRA (CBP/p300-type HAT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6P2_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.440e-41 Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = 1 Query: 1 FIQANVNRRQQELNPDVQPDEVVYINVPSNMDTSFDMPPLYKAAFYPSVESSQVRYTSKTVCAYQMHDGQPVLVLVLFCQEY 246 FIQ VN RQQELNPD+QPDE+V+INVPSNMDTSFDMP LYKAAFYP ES QVRYTSKTVCAYQ+ DGQPVLVLVLFCQEY Sbjct: 24 FIQEKVNHRQQELNPDIQPDELVHINVPSNMDTSFDMPRLYKAAFYPLAESFQVRYTSKTVCAYQVLDGQPVLVLVLFCQEY 105
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A835YX18_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX18_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.690e-33 Identity = 70/173 (40.46%), Postives = 99/173 (57.23%), Query Frame = 1 Query: 25 RQQELNPDVQPDEVVYINVPSNMDTSFDMPPLYKAAFYPSVESS-----QVRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPCRPVQQLTLTSEQLLDWYLNMLEMRC 528 R QEL + ++ VP N SFD+P + + S + T+K +C YQ+ +GQ VL++VL+C EYG D N GRVY++YLDT A P +AR+ +Y++V+AAY++WV RRGF + H+WS PP EY+ P+ Q TL LL WY +L RC Sbjct: 220 RLQELKMEQPAGYSIFAVVPVNETVSFDVPAIVRQRCAASSADQVPLPETIPSTNKCICIYQVQEGQAVLLMVLYCHEYGKDAPACNAGRVYMSYLDTVALAKPAEARTTIYQEVVAAYMDWVRRRGFSFMHLWSWPPAKGDEYILVGHPLCQGTLPQPALLQWYRKLLA-RC 391
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A835YXJ3_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ3_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.330e-33 Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 40 NPDVQPDEVVYINVPSNMDTSFDMPPLYKAAFYPSVESSQVRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFL------LPVKARSAVYKDVLAAYLEWVARRGFRYAHI 408 N ++ P + +++ + SN F+MPP +KA FYP ES +V + SKT+CAYQ+ DG+PVL + +FCQEYG D NK RVY+AYLDTAA+L P AR+A Y+ +L AYL V RGF AHI Sbjct: 21 NSNLLPAQRIHVRLASN----FNMPPAFKATFYPEAESCKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHI 145
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A835ZGH1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGH1_9STRA) HSP 1 Score: 130 bits (327), Expect = 9.130e-32 Identity = 72/188 (38.30%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 1 FIQANVNRRQQELNPDVQPDEVVYINVPSNMDTSFDMPPLYKAAFYPSVESS-------QVRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPCRPVQQLTLTSEQLLDWYLNMLEMRCMRVGI 543 FI+ +V RR EL P + I V S++ + D+ + + F P + ++ Y SK +C +Q DG V + ++ QE+G D N RVY+AYLD+ + P AR+ VY ++LAAYL+W RRGFR AHIWSCPP+ ++F P Q T T E+L+ WY ML RC +G+ Sbjct: 413 FIELHVLRRLDELGMPPPPGSIS-IRVVSSITATHDVSSVVRRTFKPGGGAPPGACIPRELSYASKALCMFQCIDGAEVCLFSMYVQEHGADAPSFNARRVYVAYLDSVEYFRPRAARTHVYHEILAAYLDWARRRGFRTAHIWSCPPQRGNNFIFWAHPEHQKTPTRERLMTWYRLMLR-RCEALGV 598
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A835YQL1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL1_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.070e-30 Identity = 64/164 (39.02%), Postives = 94/164 (57.32%), Query Frame = 1 Query: 67 VYINVPSNMDTSFDMPPLYKAAFY--PSVE-SSQVRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPC--RPVQQLTLTSEQLLDWYLNMLEMRCMRVGI 543 + + + SN + +PP +A F P V+ + YTSK +C +Q+ +G V+ L+L+ EYG D+ N+GRVY++YLD+ ++ P RS VYK VLAAY +WV RRGF H+WS P E+ + C P TL L WY +++E +C R GI Sbjct: 30 IAVRLVSNCQKATSIPPPMQATFCTAPGVDLPPSILYTSKALCLFQLINGAWVMSLMLYSYEYGDDSPACNRGRVYLSYLDSVTYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASNVKEFAYICWCHPQHHATLDQTALRQWYGDIVE-QCQRRGI 192
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A836CK84_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK84_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.720e-29 Identity = 60/155 (38.71%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 1 FIQANVNRRQQELNPDVQPDEVVYINVPSNMDTSFDMPPLY-KAAFYPSVESSQ------VRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYM 444 FI+ V+ R QEL +++ VP N + +PPL + + + SQ + YT+K C +Q+ +GQ VL +VL C+E+G N GRVY++YLDT A P +AR+ +Y++V+AAY++WV RRGFR+ H+WS P EY+ Sbjct: 26 FIKERVDNRLQELEMQQPAGYIIFAVVPINETVYYHVPPLVCERCAVSTADQSQAPPPETIPYTNKCTCIHQVQEGQAVLFMVLCCREHGASA--CNAGRVYLSYLDTVALAKPAEARTTIYQEVVAAYMDWVRRRGFRFVHLWSWPSAEGDEYI 178
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A6H5L4V8_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V8_9PHAE) HSP 1 Score: 123 bits (309), Expect = 2.850e-29 Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 160 VRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPCRPVQQLTLTSEQLLDWYLNMLEMRCMRVGISTR 552 ++Y SK + +Q DG V + ++ QEYG D N R YI+YLD+ + P K R+AVY ++L AYL+W+ RRGF+ AHIWSCPP+ ++F C P+ Q T T ++L WY NML+ R +++G++ + Sbjct: 1440 LKYRSKALSMFQRVDGVEVCLFSMYVQEYGADAPYFNARRAYISYLDSVEYFRPRKHRTAVYHEILVAYLDWLRRRGFKAAHIWSCPPQRGNNFIFWCHPLHQKTPTRDRLSGWYGNMLK-RAVQLGVAAK 1569
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Match: A0A835YPS5_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS5_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.870e-28 Identity = 59/145 (40.69%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 85 SNMDTSFDMPPLYKAAFY--PSVESSQ-VRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFLLPVKARSAVYKDVLAAYLEWVARRGFRYAHIWSCPPRPRVEYMFPC--RPVQQLTLTSEQLLDWY 504 SN + +PP +A F P V+ + + YTSK +C +Q+ DG V+ +L+ EYG D N+GRVY++YLD+ ++ P RS VYK VLAAY +WV RRGF H+WS P E+ + C P TL L WY Sbjct: 36 SNCQKATSIPPPMQATFCAAPGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWY 180 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|147318 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_486 ID=mRNA_486|Name=jgi.p|Trimin1|147318|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=552bp|location=Sequence derived from alignment at Contig_3:1837256..1837807- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TTCATACAGGCGAACGTCAACCGCCGCCAGCAGGAGCTCAATCCCGACGTback to top protein sequence of jgi.p|Trimin1|147318 >Trimin1|147318|gw1.3.330.1 ID=Trimin1|147318|gw1.3.330.1|Name=jgi.p|Trimin1|147318|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=184bp FIQANVNRRQQELNPDVQPDEVVYINVPSNMDTSFDMPPLYKAAFYPSVEback to top mRNA from alignment at Contig_3:1837256..1837807- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_486 ID=mRNA_486|Name=jgi.p|Trimin1|147318|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=552bp|location=Sequence derived from alignment at Contig_3:1837256..1837807- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:1837256..1837807- >mRNA_486 ID=mRNA_486|Name=jgi.p|Trimin1|147318|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=552bp|location=Sequence derived from alignment at Contig_3:1837256..1837807- (Tribonema minus UTEX_B_3156 )back to top |