mRNA_48 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A835Z603_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z603_9STRA) HSP 1 Score: 757 bits (1954), Expect = 1.030e-275 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 1 Query: 1 MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMARRSLSRRTCGRKLSTRVSLRRDESASRLDASEQDMDAGGSEDSFDAALDSPAKAASPSRSASSRSPPGSYLSVALSGMDAEQAAAQMAAADQPPAANVGAVAALTQLDACGGAGTLPTRAAPTPPRLLWSDY 1182 MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMARRSLSRRTCGRKLSTRVSLRRDESASRLDASEQDMDAGGSEDSFDAALDSPAKAASPSRSASSRSPPGSYLSVALSGMDAEQAAAQMAAADQPPAANVGAVAALTQLDACGGAGTLPTRAAPTPPRLLWSDY Sbjct: 1 MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMARRSLSRRTCGRKLSTRVSLRRDESASRLDASEQDMDAGGSEDSFDAALDSPAKAASPSRSASSRSPPGSYLSVALSGMDAEQAAAQMAAADQPPAANVGAVAALTQLDACGGAGTLPTRAAPTPPRLLWSDY 394
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A835Z256_9STRA (Putative serine/threonine protein kinase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z256_9STRA) HSP 1 Score: 352 bits (902), Expect = 1.220e-116 Identity = 172/280 (61.43%), Postives = 214/280 (76.43%), Query Frame = 1 Query: 1 MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMARRSLSRRTCGRKLSTRVS 840 M +G +EL NLLG+GAFGQVRLG + T RVA+K+M++ RIK+ M +VRREIS +K+L+HPNV+ LIEVLKS SH++LVCELAEGGDLFDKI +Q++FDEETTR YF QIL + YCHS+GICHRDLKPENILLAADG++R++DFGFSRA +D V++VYTR GTPNF APEVLSGR YD ADVWS G VLFVMLAGYLPFD+ ++ L KIR +F +P +V LAR L+S ML DP +R + + + PWM + L + R LST+ S Sbjct: 1 MIIGDFELTNLLGEGAFGQVRLGTNMRTEARVAVKIMELQRIKDLGMSVNVRREISSLKKLRHPNVVKLIEVLKSSSHIYLVCELAEGGDLFDKIAEQELFDEETTRNYFRQILAGVSYCHSMGICHRDLKPENILLAADGTVRISDFGFSRACIDQHAVIQVYTRVGTPNFIAPEVLSGRGYDAFSADVWSAGAVLFVMLAGYLPFDEEDLESLYTKIRRGEFKYPRYVHPLARNLISSMLVVDPLKRNTIEGVLKDPWMTNKHLDKSRVRRTLSTKFS 280
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A835ZCW8_9STRA (Putative serine/threonine kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW8_9STRA) HSP 1 Score: 328 bits (840), Expect = 3.470e-108 Identity = 155/262 (59.16%), Postives = 204/262 (77.86%), Query Frame = 1 Query: 1 MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMA 786 M VGKY+L +++G+GAFGQVRLG H DTG RVA+KVMD+DR++++ M VRREIS++K+L HP V+ L+EVLKS ++FLV LAEGGDLFDK+ Q+ FDE R +F+Q+L+ + YCHS GICHRDLKPEN+LL A+G++++ DFGFSR FL+ G VL++YTRCGTPN+ APEV+SGR Y ADVWSLGV+L+ ++AG LPFD+ S+ DL AKIR +F+FP H +LARGLVS MLT R+ + + HPWM+ Sbjct: 1 MLVGKYKLTSVIGEGAFGQVRLGTHVDTGLRVAVKVMDLDRVRKEGMSVHVRREISLLKKLDHPRVVRLVEVLKSSRNLFLVSALAEGGDLFDKMASQEAFDETAARRHFSQMLEGVSYCHSRGICHRDLKPENVLLDAEGNVQITDFGFSRTFLEEGAVLQMYTRCGTPNYIAPEVISGRGYRGPPADVWSLGVILYAIMAGSLPFDEESLPDLYAKIREGEFAFPRHFPSLARGLVSGMLTVAVDDRLTLEGVAAHPWMS 262
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A835ZM85_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZM85_9STRA) HSP 1 Score: 322 bits (825), Expect = 9.740e-106 Identity = 151/260 (58.08%), Postives = 203/260 (78.08%), Query Frame = 1 Query: 7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMA 786 VGKYEL N LGDGAFG+V LG H DTG RV++K+MD+ ++++ R+V R+IS++ +L H ++ LIEVLKS+ H+FLVC AEGGDLFDK+V Q++F+E+T RTYF +I DA++YCH G+CHRDLKPEN+ L+ADG + ++DFGFSRAF+DH T+++VYTRCGTPN+CAPEV + R YD ADVWS+GVVL+VM+AGYLPFD+ S+ L KI AD+ P H+ AR L+ ++ DP+ RI +A+I+ HPWMA Sbjct: 4 VGKYELTNKLGDGAFGEV-LGTHIDTGARVSVKMMDLHQVRDMGRSRNVLRKISMLMKLDHAGIVHLIEVLKSDHHIFLVC--AEGGDLFDKLVQQEVFNEQTARTYFAKIADAVDYCHQQGVCHRDLKPENLFLSADGRLLISDFGFSRAFIDHDTLMDVYTRCGTPNYCAPEVFTCRSYDARAADVWSMGVVLYVMVAGYLPFDERSLSTLYHKICTADYKCPRHMPRAARQLIERIIVVDPAARITLAEIKAHPWMA 260
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A836CC03_9STRA (CBL-interacting-like PK n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC03_9STRA) HSP 1 Score: 278 bits (710), Expect = 2.770e-86 Identity = 133/260 (51.15%), Postives = 188/260 (72.31%), Query Frame = 1 Query: 7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFL--DHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPW 780 VGKYE+ +G+G FG+V+L V+++T ++VAIKV+D I++Q M V+REIS+MK ++H V+ L EVL S + +FLVCEL GG+LFDKIV++ F E+ R YF Q+++ ++YCHS G+CHRDLKPENILL ++G+++++DFG S + D + ++T CGTPN+ APEVL+ R YD ADVWSLGV+L+V+LAG+LPFD+ SM +L KI+ ADFS+P R L+ +L DP QR+ +A IR HPW Sbjct: 5 VGKYEIGKTIGEGTFGKVKLAVNTETNEKVAIKVLDKSIIQKQNMGAQVKREISIMKLVRHSYVVQLKEVLASSTRIFLVCELITGGELFDKIVEKQRFSEDEARFYFKQLVEGVDYCHSQGVCHRDLKPENILLDSNGNVKISDFGLSNLYSGGDDEALKLLHTTCGTPNYVAPEVLADRGYDGRMADVWSLGVILYVLLAGFLPFDEPSMSNLFRKIQAADFSYPRWFSEDVRSLIDAILVPDPRQRLSIAQIRGHPW 264
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: D7FMK2_ECTSI (Possible CBL-interacting-like PK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK2_ECTSI) HSP 1 Score: 272 bits (695), Expect = 4.230e-84 Identity = 130/260 (50.00%), Postives = 187/260 (71.92%), Query Frame = 1 Query: 7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFL--DHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPW 780 VGKY++ +G+G FG+V+L ++++ G+++AIKV+D I+ Q M V+REIS+MK ++HP V+ L EVL S S +FLVCEL GG+LFDKIV++ F E+ R YF Q+L+ MEYCHS G+CHRDLKPENILL G+++++DFG S + D + ++T CGTPN+ APEVL+ + YD ADVWS+GV+L+V+LAG+LPFD+ SM L +KI+ ADFS+P AR ++ +L DP QR+ +A ++ HP+ Sbjct: 5 VGKYQVGRTIGEGTFGKVKLAINTENGEKMAIKVLDKSIIQRQNMGAQVKREISIMKLVRHPYVVQLKEVLASSSKIFLVCELITGGELFDKIVEKQRFTEDEARFYFRQLLEGMEYCHSQGVCHRDLKPENILLDGAGNVKISDFGLSNLYSGGDDEALKLLHTTCGTPNYVAPEVLADKGYDGRMADVWSMGVILYVLLAGFLPFDEPSMSTLFSKIQAADFSYPRWFSPEARSVIDRILVPDPKQRLTLAQMKAHPF 264
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: Q57YE4_TRYB2 (Serine/threonine kinase, putative n=4 Tax=Trypanozoon TaxID=39700 RepID=Q57YE4_TRYB2) HSP 1 Score: 258 bits (658), Expect = 2.230e-80 Identity = 131/262 (50.00%), Postives = 180/262 (68.70%), Query Frame = 1 Query: 7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDH----GTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPW 780 +G+YEL LG G F +V++G +TG+ AIK++D +++ +RM ++REI+VMK L+ PNV+ L EV+++ +H+++V EL GG+LFDKI FDE T R YF Q++ + YCHS GI HRDLKPEN+LL +D +++++DFG S + GT+L+ T CGTPN+ APEVL R YD V ADVWS GVVLFVMLAGYLPFDD +++ L KI ++ H AR L+S MLT DP +RI VA+I +HPW Sbjct: 7 IGRYELGKTLGSGNFSKVKIGRDVETGKEWAIKIIDKEQLVRERMEEQLKREIAVMKVLRQPNVIELREVMQTTNHIYIVLELVTGGELFDKIAAAKRFDENTARHYFHQLIAGVHYCHSQGIAHRDLKPENLLLDSDDTLKISDFGLSHLHNGNAGGQGTMLQ--TVCGTPNYVAPEVLKERGYDGVMADVWSCGVVLFVMLAGYLPFDDENVNALFTKIERGEYRMSRHFSPNARSLISRMLTVDPRRRITVAEITQHPW 266
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A7S3XYE1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYE1_HETAK) HSP 1 Score: 257 bits (657), Expect = 2.950e-80 Identity = 122/262 (46.56%), Postives = 186/262 (70.99%), Query Frame = 1 Query: 7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAF---LDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWM 783 VGKYE+ +G+G FG+V+ ++++TG++VA+KV+D I++Q M +++EIS+MK + HP+V+ LIEVL S + +F+V E+ GG+LFDKIV + F E+ R YF Q+L +EYCH+ G+CHRDLKPEN+LL +G+++++DFG S + D G L ++T CGTPN+ APEVL+ + YD KAD+WS GV+L+V+ AG+LPFD+ SM L KI+ ADFS+P RGL+ ++T D ++R+ + ++ PW+ Sbjct: 6 VGKYEIGKTIGEGTFGKVKSAINTETGEQVALKVLDKSAIQKQNMGPQIKKEISIMKMVSHPHVVRLIEVLASRTKIFIVLEMVTGGELFDKIVAEGRFSEDKARFYFRQLLAGVEYCHARGVCHRDLKPENLLLDENGNLKISDFGLSALYSGGTDEGMKL-LHTTCGTPNYVAPEVLADQGYDGRKADLWSCGVILYVLQAGFLPFDENSMSALFKKIQAADFSYPRWFSQEVRGLLDRIMTVDVNKRLTIPQMKEDPWI 266
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A5A8D7M2_CAFRO (Protein kinase domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D7M2_CAFRO) HSP 1 Score: 263 bits (671), Expect = 3.890e-80 Identity = 127/262 (48.47%), Postives = 185/262 (70.61%), Query Frame = 1 Query: 7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHG----TVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPW 780 VGKYE+ LG+G FG+V+ V ++T Q+VAIK++D ++I+ Q M +++EIS+MK ++HPNV+ L EVL S + +F+V EL GG+LFDKIV + F EET R YF +++ + YCHS G+ HRDLKPEN+LL +++++DFG S + G T L ++T CGTPN+ APEVL+ + YD ADVWS GV+L+V+LAG+LPFD+ +M L AKI+ A++ FP ++ AR L++ +L DP++R+ V DI HPW Sbjct: 5 VGKYEIGKTLGEGTFGKVKWAVDTETNQKVAIKILDKEKIQRQNMGAQIKKEISIMKMVRHPNVVKLHEVLASRTKIFIVLELVTGGELFDKIVAEGRFSEETARFYFRELIGGVRYCHSKGVAHRDLKPENLLLDPRSNLKISDFGLSALYTGEGDSTRTTL-LHTTCGTPNYVAPEVLNDKGYDGRAADVWSCGVILYVLLAGFLPFDEDTMSKLFAKIQKAEYQFPVWIKESARDLIAKILVPDPTKRLTVDDIMTHPW 265
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A812R5X7_9DINO (CIPK23 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812R5X7_9DINO) HSP 1 Score: 263 bits (671), Expect = 3.890e-80 Identity = 130/265 (49.06%), Postives = 184/265 (69.43%), Query Frame = 1 Query: 7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFS-----RAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMA 786 VGKYE+ LG+G FG+V+ V+++TG+RVAIK++D ++I+ Q M +++EIS+MK +KH NV+SL EVL S + +F+V EL GG+LFDKIV + F+EE R YF Q++ + YCHS G+CHRDLKPEN+LL S++++DFG S A D T+L +T CGTPN+ APEVLS + YD AD+WS GV+L+V+LAG+LPFD+ M L KI+ ADF++P A RGL+ +L DP++R+ + + H W A Sbjct: 5 VGKYEIGRTLGEGTFGKVKYAVNTETGERVAIKILDKEKIQRQNMGAQIKKEISIMKMVKHDNVVSLYEVLASRTKIFIVLELITGGELFDKIVSEGRFNEEMARYYFRQLIKGVSYCHSQGVCHRDLKPENLLLDEKSSLKISDFGLSALYGGEASDDRMTLL--HTTCGTPNYVAPEVLSDKGYDGRAADIWSCGVILYVLLAGFLPFDEPHMSALFRKIQKADFTYPSWFTAEVRGLLDQILVPDPAKRLTLDGVMSHSWFA 267 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_48 ID=mRNA_48|Name=jgi.p|Trimin1|157263|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1185bp|location=Sequence derived from alignment at Contig_3:352331..353622- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTTTGTCGGCAAGTACGAGCTGCTGAACCTTCTGGGAGATGGCGCCTTback to top protein sequence of jgi.p|Trimin1|157263 >Trimin1|157263|e_gw1.3.503.1 ID=Trimin1|157263|e_gw1.3.503.1|Name=jgi.p|Trimin1|157263|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=395bp MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSback to top mRNA from alignment at Contig_3:352331..353622- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_48 ID=mRNA_48|Name=jgi.p|Trimin1|157263|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1292bp|location=Sequence derived from alignment at Contig_3:352331..353622- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:352331..353622- >mRNA_48 ID=mRNA_48|Name=jgi.p|Trimin1|157263|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1185bp|location=Sequence derived from alignment at Contig_3:352331..353622- (Tribonema minus UTEX_B_3156 )back to top |