mRNA_48 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157263
Unique NamemRNA_48
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A835Z603_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z603_9STRA)

HSP 1 Score: 757 bits (1954), Expect = 1.030e-275
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 1
Query:    1 MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMARRSLSRRTCGRKLSTRVSLRRDESASRLDASEQDMDAGGSEDSFDAALDSPAKAASPSRSASSRSPPGSYLSVALSGMDAEQAAAQMAAADQPPAANVGAVAALTQLDACGGAGTLPTRAAPTPPRLLWSDY 1182
            MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMARRSLSRRTCGRKLSTRVSLRRDESASRLDASEQDMDAGGSEDSFDAALDSPAKAASPSRSASSRSPPGSYLSVALSGMDAEQAAAQMAAADQPPAANVGAVAALTQLDACGGAGTLPTRAAPTPPRLLWSDY
Sbjct:    1 MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMARRSLSRRTCGRKLSTRVSLRRDESASRLDASEQDMDAGGSEDSFDAALDSPAKAASPSRSASSRSPPGSYLSVALSGMDAEQAAAQMAAADQPPAANVGAVAALTQLDACGGAGTLPTRAAPTPPRLLWSDY 394          
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A835Z256_9STRA (Putative serine/threonine protein kinase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z256_9STRA)

HSP 1 Score: 352 bits (902), Expect = 1.220e-116
Identity = 172/280 (61.43%), Postives = 214/280 (76.43%), Query Frame = 1
Query:    1 MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMARRSLSRRTCGRKLSTRVS 840
            M +G +EL NLLG+GAFGQVRLG +  T  RVA+K+M++ RIK+  M  +VRREIS +K+L+HPNV+ LIEVLKS SH++LVCELAEGGDLFDKI +Q++FDEETTR YF QIL  + YCHS+GICHRDLKPENILLAADG++R++DFGFSRA +D   V++VYTR GTPNF APEVLSGR YD   ADVWS G VLFVMLAGYLPFD+  ++ L  KIR  +F +P +V  LAR L+S ML  DP +R  +  + + PWM  + L +    R LST+ S
Sbjct:    1 MIIGDFELTNLLGEGAFGQVRLGTNMRTEARVAVKIMELQRIKDLGMSVNVRREISSLKKLRHPNVVKLIEVLKSSSHIYLVCELAEGGDLFDKIAEQELFDEETTRNYFRQILAGVSYCHSMGICHRDLKPENILLAADGTVRISDFGFSRACIDQHAVIQVYTRVGTPNFIAPEVLSGRGYDAFSADVWSAGAVLFVMLAGYLPFDEEDLESLYTKIRRGEFKYPRYVHPLARNLISSMLVVDPLKRNTIEGVLKDPWMTNKHLDKSRVRRTLSTKFS 280          
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A835ZCW8_9STRA (Putative serine/threonine kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW8_9STRA)

HSP 1 Score: 328 bits (840), Expect = 3.470e-108
Identity = 155/262 (59.16%), Postives = 204/262 (77.86%), Query Frame = 1
Query:    1 MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMA 786
            M VGKY+L +++G+GAFGQVRLG H DTG RVA+KVMD+DR++++ M   VRREIS++K+L HP V+ L+EVLKS  ++FLV  LAEGGDLFDK+  Q+ FDE   R +F+Q+L+ + YCHS GICHRDLKPEN+LL A+G++++ DFGFSR FL+ G VL++YTRCGTPN+ APEV+SGR Y    ADVWSLGV+L+ ++AG LPFD+ S+ DL AKIR  +F+FP H  +LARGLVS MLT     R+ +  +  HPWM+
Sbjct:    1 MLVGKYKLTSVIGEGAFGQVRLGTHVDTGLRVAVKVMDLDRVRKEGMSVHVRREISLLKKLDHPRVVRLVEVLKSSRNLFLVSALAEGGDLFDKMASQEAFDETAARRHFSQMLEGVSYCHSRGICHRDLKPENVLLDAEGNVQITDFGFSRTFLEEGAVLQMYTRCGTPNYIAPEVISGRGYRGPPADVWSLGVILYAIMAGSLPFDEESLPDLYAKIREGEFAFPRHFPSLARGLVSGMLTVAVDDRLTLEGVAAHPWMS 262          
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A835ZM85_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZM85_9STRA)

HSP 1 Score: 322 bits (825), Expect = 9.740e-106
Identity = 151/260 (58.08%), Postives = 203/260 (78.08%), Query Frame = 1
Query:    7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMA 786
            VGKYEL N LGDGAFG+V LG H DTG RV++K+MD+ ++++    R+V R+IS++ +L H  ++ LIEVLKS+ H+FLVC  AEGGDLFDK+V Q++F+E+T RTYF +I DA++YCH  G+CHRDLKPEN+ L+ADG + ++DFGFSRAF+DH T+++VYTRCGTPN+CAPEV + R YD   ADVWS+GVVL+VM+AGYLPFD+ S+  L  KI  AD+  P H+   AR L+  ++  DP+ RI +A+I+ HPWMA
Sbjct:    4 VGKYELTNKLGDGAFGEV-LGTHIDTGARVSVKMMDLHQVRDMGRSRNVLRKISMLMKLDHAGIVHLIEVLKSDHHIFLVC--AEGGDLFDKLVQQEVFNEQTARTYFAKIADAVDYCHQQGVCHRDLKPENLFLSADGRLLISDFGFSRAFIDHDTLMDVYTRCGTPNYCAPEVFTCRSYDARAADVWSMGVVLYVMVAGYLPFDERSLSTLYHKICTADYKCPRHMPRAARQLIERIIVVDPAARITLAEIKAHPWMA 260          
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A836CC03_9STRA (CBL-interacting-like PK n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC03_9STRA)

HSP 1 Score: 278 bits (710), Expect = 2.770e-86
Identity = 133/260 (51.15%), Postives = 188/260 (72.31%), Query Frame = 1
Query:    7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFL--DHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPW 780
            VGKYE+   +G+G FG+V+L V+++T ++VAIKV+D   I++Q M   V+REIS+MK ++H  V+ L EVL S + +FLVCEL  GG+LFDKIV++  F E+  R YF Q+++ ++YCHS G+CHRDLKPENILL ++G+++++DFG S  +   D   +  ++T CGTPN+ APEVL+ R YD   ADVWSLGV+L+V+LAG+LPFD+ SM +L  KI+ ADFS+P       R L+  +L  DP QR+ +A IR HPW
Sbjct:    5 VGKYEIGKTIGEGTFGKVKLAVNTETNEKVAIKVLDKSIIQKQNMGAQVKREISIMKLVRHSYVVQLKEVLASSTRIFLVCELITGGELFDKIVEKQRFSEDEARFYFKQLVEGVDYCHSQGVCHRDLKPENILLDSNGNVKISDFGLSNLYSGGDDEALKLLHTTCGTPNYVAPEVLADRGYDGRMADVWSLGVILYVLLAGFLPFDEPSMSNLFRKIQAADFSYPRWFSEDVRSLIDAILVPDPRQRLSIAQIRGHPW 264          
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: D7FMK2_ECTSI (Possible CBL-interacting-like PK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK2_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 4.230e-84
Identity = 130/260 (50.00%), Postives = 187/260 (71.92%), Query Frame = 1
Query:    7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFL--DHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPW 780
            VGKY++   +G+G FG+V+L ++++ G+++AIKV+D   I+ Q M   V+REIS+MK ++HP V+ L EVL S S +FLVCEL  GG+LFDKIV++  F E+  R YF Q+L+ MEYCHS G+CHRDLKPENILL   G+++++DFG S  +   D   +  ++T CGTPN+ APEVL+ + YD   ADVWS+GV+L+V+LAG+LPFD+ SM  L +KI+ ADFS+P      AR ++  +L  DP QR+ +A ++ HP+
Sbjct:    5 VGKYQVGRTIGEGTFGKVKLAINTENGEKMAIKVLDKSIIQRQNMGAQVKREISIMKLVRHPYVVQLKEVLASSSKIFLVCELITGGELFDKIVEKQRFTEDEARFYFRQLLEGMEYCHSQGVCHRDLKPENILLDGAGNVKISDFGLSNLYSGGDDEALKLLHTTCGTPNYVAPEVLADKGYDGRMADVWSMGVILYVLLAGFLPFDEPSMSTLFSKIQAADFSYPRWFSPEARSVIDRILVPDPKQRLTLAQMKAHPF 264          
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: Q57YE4_TRYB2 (Serine/threonine kinase, putative n=4 Tax=Trypanozoon TaxID=39700 RepID=Q57YE4_TRYB2)

HSP 1 Score: 258 bits (658), Expect = 2.230e-80
Identity = 131/262 (50.00%), Postives = 180/262 (68.70%), Query Frame = 1
Query:    7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDH----GTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPW 780
            +G+YEL   LG G F +V++G   +TG+  AIK++D +++  +RM   ++REI+VMK L+ PNV+ L EV+++ +H+++V EL  GG+LFDKI     FDE T R YF Q++  + YCHS GI HRDLKPEN+LL +D +++++DFG S     +    GT+L+  T CGTPN+ APEVL  R YD V ADVWS GVVLFVMLAGYLPFDD +++ L  KI   ++    H    AR L+S MLT DP +RI VA+I +HPW
Sbjct:    7 IGRYELGKTLGSGNFSKVKIGRDVETGKEWAIKIIDKEQLVRERMEEQLKREIAVMKVLRQPNVIELREVMQTTNHIYIVLELVTGGELFDKIAAAKRFDENTARHYFHQLIAGVHYCHSQGIAHRDLKPENLLLDSDDTLKISDFGLSHLHNGNAGGQGTMLQ--TVCGTPNYVAPEVLKERGYDGVMADVWSCGVVLFVMLAGYLPFDDENVNALFTKIERGEYRMSRHFSPNARSLISRMLTVDPRRRITVAEITQHPW 266          
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A7S3XYE1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYE1_HETAK)

HSP 1 Score: 257 bits (657), Expect = 2.950e-80
Identity = 122/262 (46.56%), Postives = 186/262 (70.99%), Query Frame = 1
Query:    7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAF---LDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWM 783
            VGKYE+   +G+G FG+V+  ++++TG++VA+KV+D   I++Q M   +++EIS+MK + HP+V+ LIEVL S + +F+V E+  GG+LFDKIV +  F E+  R YF Q+L  +EYCH+ G+CHRDLKPEN+LL  +G+++++DFG S  +    D G  L ++T CGTPN+ APEVL+ + YD  KAD+WS GV+L+V+ AG+LPFD+ SM  L  KI+ ADFS+P       RGL+  ++T D ++R+ +  ++  PW+
Sbjct:    6 VGKYEIGKTIGEGTFGKVKSAINTETGEQVALKVLDKSAIQKQNMGPQIKKEISIMKMVSHPHVVRLIEVLASRTKIFIVLEMVTGGELFDKIVAEGRFSEDKARFYFRQLLAGVEYCHARGVCHRDLKPENLLLDENGNLKISDFGLSALYSGGTDEGMKL-LHTTCGTPNYVAPEVLADQGYDGRKADLWSCGVILYVLQAGFLPFDENSMSALFKKIQAADFSYPRWFSQEVRGLLDRIMTVDVNKRLTIPQMKEDPWI 266          
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A5A8D7M2_CAFRO (Protein kinase domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D7M2_CAFRO)

HSP 1 Score: 263 bits (671), Expect = 3.890e-80
Identity = 127/262 (48.47%), Postives = 185/262 (70.61%), Query Frame = 1
Query:    7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFSRAFLDHG----TVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPW 780
            VGKYE+   LG+G FG+V+  V ++T Q+VAIK++D ++I+ Q M   +++EIS+MK ++HPNV+ L EVL S + +F+V EL  GG+LFDKIV +  F EET R YF +++  + YCHS G+ HRDLKPEN+LL    +++++DFG S  +   G    T L ++T CGTPN+ APEVL+ + YD   ADVWS GV+L+V+LAG+LPFD+ +M  L AKI+ A++ FP  ++  AR L++ +L  DP++R+ V DI  HPW
Sbjct:    5 VGKYEIGKTLGEGTFGKVKWAVDTETNQKVAIKILDKEKIQRQNMGAQIKKEISIMKMVRHPNVVKLHEVLASRTKIFIVLELVTGGELFDKIVAEGRFSEETARFYFRELIGGVRYCHSKGVAHRDLKPENLLLDPRSNLKISDFGLSALYTGEGDSTRTTL-LHTTCGTPNYVAPEVLNDKGYDGRAADVWSCGVILYVLLAGFLPFDEDTMSKLFAKIQKAEYQFPVWIKESARDLIAKILVPDPTKRLTVDDIMTHPW 265          
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Match: A0A812R5X7_9DINO (CIPK23 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812R5X7_9DINO)

HSP 1 Score: 263 bits (671), Expect = 3.890e-80
Identity = 130/265 (49.06%), Postives = 184/265 (69.43%), Query Frame = 1
Query:    7 VGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRSVRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDMFDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGFS-----RAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVMLAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRIGVADIRRHPWMA 786
            VGKYE+   LG+G FG+V+  V+++TG+RVAIK++D ++I+ Q M   +++EIS+MK +KH NV+SL EVL S + +F+V EL  GG+LFDKIV +  F+EE  R YF Q++  + YCHS G+CHRDLKPEN+LL    S++++DFG S      A  D  T+L  +T CGTPN+ APEVLS + YD   AD+WS GV+L+V+LAG+LPFD+  M  L  KI+ ADF++P    A  RGL+  +L  DP++R+ +  +  H W A
Sbjct:    5 VGKYEIGRTLGEGTFGKVKYAVNTETGERVAIKILDKEKIQRQNMGAQIKKEISIMKMVKHDNVVSLYEVLASRTKIFIVLELITGGELFDKIVSEGRFNEEMARYYFRQLIKGVSYCHSQGVCHRDLKPENLLLDEKSSLKISDFGLSALYGGEASDDRMTLL--HTTCGTPNYVAPEVLSDKGYDGRAADIWSCGVILYVLLAGFLPFDEPHMSALFRKIQKADFTYPSWFTAEVRGLLDQILVPDPAKRLTLDGVMSHSWFA 267          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157263 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z603_9STRA1.030e-275100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835Z256_9STRA1.220e-11661.43Putative serine/threonine protein kinase n=3 Tax=T... [more]
A0A835ZCW8_9STRA3.470e-10859.16Putative serine/threonine kinase (Fragment) n=1 Ta... [more]
A0A835ZM85_9STRA9.740e-10658.08Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A836CC03_9STRA2.770e-8651.15CBL-interacting-like PK n=1 Tax=Tribonema minus Ta... [more]
D7FMK2_ECTSI4.230e-8450.00Possible CBL-interacting-like PK n=1 Tax=Ectocarpu... [more]
Q57YE4_TRYB22.230e-8050.00Serine/threonine kinase, putative n=4 Tax=Trypanoz... [more]
A0A7S3XYE1_HETAK2.950e-8046.56Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5A8D7M2_CAFRO3.890e-8048.47Protein kinase domain-containing protein n=2 Tax=C... [more]
A0A812R5X7_9DINO3.890e-8049.06CIPK23 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:352331..353622 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157263|e_gw1.3.503.1
DescriptionBelongs to the protein kinase superfamily
COG categoryT
Max annot lvl5653|Kinetoplastida
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota,3XTBQ@5653|Kinetoplastida
Evalue3.65e-81
Seed ortholog5691.AAZ12858
Hectar predicted targeting categoryother localisation
TranscriptId157585
TrackFilteredModels1
ProteinId157263
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157263gene_48Tribonema minus UTEX_B_3156 geneContig_3 352331..353622 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157263Trimin1|157263|e_gw1.3.503.1Tribonema minus UTEX_B_3156 polypeptideContig_3 352331..353622 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_48_2exon_48_2Tribonema minus UTEX_B_3156 exonContig_3 352331..353013 -
exon_48_1exon_48_1Tribonema minus UTEX_B_3156 exonContig_3 353121..353622 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_48CDS_48Tribonema minus UTEX_B_3156 CDSContig_3 353121..353622 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_48 ID=mRNA_48|Name=jgi.p|Trimin1|157263|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1185bp|location=Sequence derived from alignment at Contig_3:352331..353622- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTGTCGGCAAGTACGAGCTGCTGAACCTTCTGGGAGATGGCGCCTT
CGGGCAGGTGCGCCTGGGAGTTCACTCCGACACCGGCCAGAGGGTGGCCA
TCAAGGTCATGGACGTGGACAGGATCAAGGAGCAGCGGATGTGCCGCAGC
GTGCGGCGGGAGATCTCCGTCATGAAGAGGCTCAAGCACCCCAACGTGCT
GAGCCTGATCGAGGTCCTCAAGTCGGAGAGTCACGTGTTCCTGGTGTGCG
AGCTGGCGGAGGGGGGGGACCTGTTCGACAAGATCGTGGATCAGGACATG
TTCGACGAGGAGACGACCAGGACCTACTTCACCCAGATTCTGGACGCGAT
GGAGTACTGCCACTCCGTCGGCATCTGCCATCGAGACCTGAAGCCGGAGA
ACATCCTGCTGGCCGCGGACGGCTCCATCCGCGTCGCTGACTTCGGCTTC
AGCCGGGCCTTCCTGGACCACGGCACGGTGCTGGAGGTGTACACTCGCTG
CGGCACTCCCAACTTCTGCGCCCCGGAGGTCCTCAGCGGCAGGCGGTACG
ACCCCGTGAAGGCGGACGTCTGGAGCCTGGGGGTGGTGCTCTTCGTCATG
CTGGCCGGCTACCTGCCGTTCGACGATGTGAGCATGGACGACCTGTGCGC
CAAGATCAGGGTCGCGGACTTCAGCTTCCCCCACCACGTGCGCGCACTCG
CCCGGGGCCTCGTGTCCCTCATGCTGACTGCGGATCCGTCGCAGCGCATA
GGGGTCGCGGACATACGGCGGCACCCCTGGATGGCCAGGCGCTCGCTGAG
CAGGAGGACGTGCGGCCGCAAGCTGAGCACGAGAGTGAGTCTGAGGAGGG
ACGAGTCCGCCTCGCGGCTCGACGCCTCGGAGCAGGACATGGACGCGGGC
GGCAGCGAAGACTCCTTCGACGCGGCCCTCGACAGTCCCGCGAAGGCGGC
GAGCCCCTCTCGCTCGGCGAGCTCCCGGTCCCCCCCCGGATCGTACCTGA
GCGTGGCGCTGTCGGGCATGGACGCGGAGCAGGCCGCAGCTCAGATGGCG
GCCGCGGACCAGCCGCCAGCGGCGAACGTGGGGGCGGTGGCCGCTCTGAC
GCAGCTGGACGCCTGCGGCGGCGCCGGCACCCTGCCGACGAGGGCGGCCC
CGACCCCGCCGAGGCTACTGTGGTCGGACTACTGA
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protein sequence of jgi.p|Trimin1|157263

>Trimin1|157263|e_gw1.3.503.1 ID=Trimin1|157263|e_gw1.3.503.1|Name=jgi.p|Trimin1|157263|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=395bp
MFVGKYELLNLLGDGAFGQVRLGVHSDTGQRVAIKVMDVDRIKEQRMCRS
VRREISVMKRLKHPNVLSLIEVLKSESHVFLVCELAEGGDLFDKIVDQDM
FDEETTRTYFTQILDAMEYCHSVGICHRDLKPENILLAADGSIRVADFGF
SRAFLDHGTVLEVYTRCGTPNFCAPEVLSGRRYDPVKADVWSLGVVLFVM
LAGYLPFDDVSMDDLCAKIRVADFSFPHHVRALARGLVSLMLTADPSQRI
GVADIRRHPWMARRSLSRRTCGRKLSTRVSLRRDESASRLDASEQDMDAG
GSEDSFDAALDSPAKAASPSRSASSRSPPGSYLSVALSGMDAEQAAAQMA
AADQPPAANVGAVAALTQLDACGGAGTLPTRAAPTPPRLLWSDY*
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mRNA from alignment at Contig_3:352331..353622-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_48 ID=mRNA_48|Name=jgi.p|Trimin1|157263|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1292bp|location=Sequence derived from alignment at Contig_3:352331..353622- (Tribonema minus UTEX_B_3156 )
ATGTTTGTCGGCAAGTACGAGCTGCTGAACCTTCTGGGAGATGGCGCCTT CGGGCAGGTGCGCCTGGGAGTTCACTCCGACACCGGCCAGAGGGTGGCCA TCAAGGTCATGGACGTGGACAGGATCAAGGAGCAGCGGATGTGCCGCAGC GTGCGGCGGGAGATCTCCGTCATGAAGAGGCTCAAGCACCCCAACGTGCT GAGCCTGATCGAGGTCCTCAAGTCGGAGAGTCACGTGTTCCTGGTGTGCG AGCTGGCGGAGGGGGGGGACCTGTTCGACAAGATCGTGGATCAGGACATG TTCGACGAGGAGACGACCAGGACCTACTTCACCCAGATTCTGGACGCGAT GGAGTACTGCCACTCCGTCGGCATCTGCCATCGAGACCTGAAGCCGGAGA ACATCCTGCTGGCCGCGGACGGCTCCATCCGCGTCGCTGACTTCGGCTTC AGCCGGGCCTTCCTGGACCACGGCACGGTGCTGGAGGTGTACACTCGCTG CGGTGAGCGCCGCCGCCCGAAACGCCGGCCTGCCAGCGACGCGCACCCTC AGATGCTCGCCTCATCCTCGACGACGCCCTCACTCGTCCTGCCCGCCCCT CGCTCGCAGGCACTCCCAACTTCTGCGCCCCGGAGGTCCTCAGCGGCAGG CGGTACGACCCCGTGAAGGCGGACGTCTGGAGCCTGGGGGTGGTGCTCTT CGTCATGCTGGCCGGCTACCTGCCGTTCGACGATGTGAGCATGGACGACC TGTGCGCCAAGATCAGGGTCGCGGACTTCAGCTTCCCCCACCACGTGCGC GCACTCGCCCGGGGCCTCGTGTCCCTCATGCTGACTGCGGATCCGTCGCA GCGCATAGGGGTCGCGGACATACGGCGGCACCCCTGGATGGCCAGGCGCT CGCTGAGCAGGAGGACGTGCGGCCGCAAGCTGAGCACGAGAGTGAGTCTG AGGAGGGACGAGTCCGCCTCGCGGCTCGACGCCTCGGAGCAGGACATGGA CGCGGGCGGCAGCGAAGACTCCTTCGACGCGGCCCTCGACAGTCCCGCGA AGGCGGCGAGCCCCTCTCGCTCGGCGAGCTCCCGGTCCCCCCCCGGATCG TACCTGAGCGTGGCGCTGTCGGGCATGGACGCGGAGCAGGCCGCAGCTCA GATGGCGGCCGCGGACCAGCCGCCAGCGGCGAACGTGGGGGCGGTGGCCG CTCTGACGCAGCTGGACGCCTGCGGCGGCGCCGGCACCCTGCCGACGAGG GCGGCCCCGACCCCGCCGAGGCTACTGTGGTCGGACTACTGA
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Coding sequence (CDS) from alignment at Contig_3:352331..353622-

>mRNA_48 ID=mRNA_48|Name=jgi.p|Trimin1|157263|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1185bp|location=Sequence derived from alignment at Contig_3:352331..353622- (Tribonema minus UTEX_B_3156 )
ATGTTTGTCGGCAAGTACGAGCTGCTGAACCTTCTGGGAGATGGCGCCTT
CGGGCAGGTGCGCCTGGGAGTTCACTCCGACACCGGCCAGAGGGTGGCCA
TCAAGGTCATGGACGTGGACAGGATCAAGGAGCAGCGGATGTGCCGCAGC
GTGCGGCGGGAGATCTCCGTCATGAAGAGGCTCAAGCACCCCAACGTGCT
GAGCCTGATCGAGGTCCTCAAGTCGGAGAGTCACGTGTTCCTGGTGTGCG
AGCTGGCGGAGGGGGGGGACCTGTTCGACAAGATCGTGGATCAGGACATG
TTCGACGAGGAGACGACCAGGACCTACTTCACCCAGATTCTGGACGCGAT
GGAGTACTGCCACTCCGTCGGCATCTGCCATCGAGACCTGAAGCCGGAGA
ACATCCTGCTGGCCGCGGACGGCTCCATCCGCGTCGCTGACTTCGGCTTC
AGCCGGGCCTTCCTGGACCACGGCACGGTGCTGGAGGTGTACACTCGCTG
CGGCACTCCCAACTTCTGCGCCCCGGAGGTCCTCAGCGGCAGGCGGTACG
ACCCCGTGAAGGCGGACGTCTGGAGCCTGGGGGTGGTGCTCTTCGTCATG
CTGGCCGGCTACCTGCCGTTCGACGATGTGAGCATGGACGACCTGTGCGC
CAAGATCAGGGTCGCGGACTTCAGCTTCCCCCACCACGTGCGCGCACTCG
CCCGGGGCCTCGTGTCCCTCATGCTGACTGCGGATCCGTCGCAGCGCATA
GGGGTCGCGGACATACGGCGGCACCCCTGGATGGCCAGGCGCTCGCTGAG
CAGGAGGACGTGCGGCCGCAAGCTGAGCACGAGAGTGAGTCTGAGGAGGG
ACGAGTCCGCCTCGCGGCTCGACGCCTCGGAGCAGGACATGGACGCGGGC
GGCAGCGAAGACTCCTTCGACGCGGCCCTCGACAGTCCCGCGAAGGCGGC
GAGCCCCTCTCGCTCGGCGAGCTCCCGGTCCCCCCCCGGATCGTACCTGA
GCGTGGCGCTGTCGGGCATGGACGCGGAGCAGGCCGCAGCTCAGATGGCG
GCCGCGGACCAGCCGCCAGCGGCGAACGTGGGGGCGGTGGCCGCTCTGAC
GCAGCTGGACGCCTGCGGCGGCGCCGGCACCCTGCCGACGAGGGCGGCCC
CGACCCCGCCGAGGCTACTGTGGTCGGACTACTGA
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