mRNA_475 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: A0A835YXJ3_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ3_9STRA) HSP 1 Score: 296 bits (759), Expect = 9.320e-102 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1 Query: 1 LLPQTYMSAFMEELVAVLLKNSNLLPAQRIHVRLASNFNMPPAFKATFYPEAESCKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHIRLHP 447 LLPQTYMSAFMEELVAVLLKNSNLLPAQRIHVRLASNFNMPPAFKATFYPEAESCKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHIRLHP Sbjct: 1 LLPQTYMSAFMEELVAVLLKNSNLLPAQRIHVRLASNFNMPPAFKATFYPEAESCKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHIRLHP 149
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: A0A836CEA1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA1_9STRA) HSP 1 Score: 123 bits (309), Expect = 7.650e-33 Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 61 NSNLLPAQRIHVRLASN----FNMPPAFKATFYPEAESCKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHI 435 N ++ P + +++ + SN F+MPP +KA FYP ES +V + SKT+CAYQ+ DG+PVL + +FCQEYG D NK RVY+AYLDTAA+L P AR+A Y+ +L AYL V RGF AHI Sbjct: 14 NPDVQPDEVVYINVPSNMDTSFDMPPLYKAAFYPSVESSQVRYTSKTVCAYQMHDGQPVLVLVLFCQEYGIDTVEANKGRVYIAYLDTAAFL------LPVKARSAVYKDVLAAYLEWVARRGFRYAHI 136
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: A0A835Z6R2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R2_9STRA) HSP 1 Score: 112 bits (280), Expect = 5.120e-26 Identity = 57/112 (50.89%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 100 LASNFNMPPAFKATFYPEAESCKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHI 435 + ++F+MP +KA YP AES +V + SKT+CAYQ+ DG+PVL + +FCQEYG D NK RVY+AYLDTAA+L P AR++ ++ +L AYL V RGF AHI Sbjct: 1 MGTSFDMPRLYKAALYPLAESSQVRYTSKTVCAYQMVDGQPVLVLVLFCQEYGLDTVEANKGRVYIAYLDTAAFLS------PVKARSSVHKEVLAAYLEWVARRGFRYAHI 106
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: A0A835Z6P2_9STRA (CBP/p300-type HAT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6P2_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 3.030e-17 Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 4 LPQTYMSAFMEELVAVLLK--NSNLLPAQRIHVRLASN----FNMPPAFKATFYPEAESCKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGN---KRRVYV 297 LP ++M+AF++E V + N ++ P + +H+ + SN F+MP +KA FYP AES +V + SKT+CAYQ+ DG+PVL + +FCQEY G RRVY+ Sbjct: 16 LPPSFMAAFIQEKVNHRQQELNPDIQPDELVHINVPSNMDTSFDMPRLYKAAFYPLAESFQVRYTSKTVCAYQVLDGQPVLVLVLFCQEYRARHRGGQLEVDRRVYM 122
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: A0A835YX18_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX18_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.790e-15 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 169 VPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHI 435 +P +K IC YQ+Q+G+ VL M ++C EYG DAPA N RVY++YLDT A P ART YQ ++ AY+ V+ RGF+ H+ Sbjct: 270 IPSTNKCICIYQVQEGQAVLLMVLYCHEYGKDAPACNAGRVYMSYLDTVALAK------PAEARTTIYQEVVAAYMDWVRRRGFSFMHL 352
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: A0A835ZA33_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA33_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 6.860e-15 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 169 VPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHI 435 +P+ +K IC YQ+Q+G+ VL M ++C EYG DAPA N VY++YLD A P ART YQ ++ AY V+ RGF H+ Sbjct: 86 IPYTNKCICIYQVQEGQAVLFMVLYCHEYGKDAPACNAGCVYLSYLDAVALAK------PAEARTTIYQEVVAAYTDWVRRRGFCFMHL 168
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: A0A835YPS5_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS5_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.140e-13 Identity = 49/133 (36.84%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 67 NLLPAQR--IHVRLASNF----NMPPAFKATFYPEAESCKVP----FVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHI 435 ++LPA I VR SN ++PP +ATF A +P + SK +C +QL DG V++ ++ EYG+DAPA N+ RVY++YLD+ Y+ P R+ Y+ +L AY V+ RGF+ H+ Sbjct: 21 SVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCA-APGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQ------PYTCRSVVYKTVLAAYFDWVRRRGFSTVHL 146
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: A0A2R5G0C5_9STRA (Histone acetyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0C5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.780e-13 Identity = 49/125 (39.20%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 79 AQRIHVRLASNFN----MPPAFKATF--YPEAESCKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHI 435 A ++H+R+ SNF+ + P K YP+A PF S+ I +Q DG VL AMF QEYG+D P N+R+VY+AYLD+ Y P RT Y +L YL ++ G T+A+I Sbjct: 829 ADKLHIRVLSNFDEECKVKPFVKRLIPEYPDA----FPFRSRCIFLFQELDGVDVLFFAMFVQEYGSDCPDPNRRKVYIAYLDSVYYFQ------PRRLRTTVYHELLLGYLEYMRRDGMTSAYI 943
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: A0A835YIA2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA2_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 6.690e-13 Identity = 55/151 (36.42%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 4 LPQTYMSAFMEELVAVLLKNSNLLPAQRIHVRLASNFNM----PPAFKATFYP---EAESCKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHI 435 LP++ + FME V KN+ A + VRL SN + PP ATF + +P+ SK +C +Q +G VL M+ QEY DAPA N+ R Y++Y+D+AA+ P ARTA Y+ + AY V+ RGF H+ Sbjct: 502 LPRSDVGDFMELRV----KNTQPADAPPLAVRLVSNTKLAMLVPPPVWATFRAAPGQPLPHVIPYSSKALCMFQQINGLWVLCFVMYVQEYSGDAPACNRGRAYISYIDSAAHWQ------PSSARTAAYKEFVVAYADWVRRRGFGWIHL 642
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Match: UPI001C9009EB (CREB-binding protein-like n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C9009EB) HSP 1 Score: 74.3 bits (181), Expect = 1.310e-12 Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 1 Query: 4 LPQTYMSAFMEELVAVLLKNSNLLPAQRIHVRLASNFN----MPPAFKATFYPEAES-CKVPFVSKTICAYQLQDGEPVLAMAMFCQEYGNDAPAGNKRRVYVAYLDTAAYLDTAPNLAPGPARTATYQAMLQAYLARVQPRGFTAAHI 435 LP T + ++E V LK A + +R+ S+ + + P KA F E K P+ +K + A++ DG V M QEYG+D+P N+RRVY+AYLD+ + P RT+ Y +L AYL V+ G+T AHI Sbjct: 1148 LPATKLGTYIENRVNNYLKKKES-GAGEVFIRVVSSSDKICEVKPGMKARFCDAGEMPAKFPYRAKALFAFEEVDGHEVCFFGMHVQEYGSDSPQPNRRRVYIAYLDSVHFFR------PRQFRTSVYHEILLAYLDYVKQLGYTMAHI 1289 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|147292 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_475 ID=mRNA_475|Name=jgi.p|Trimin1|147292|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=447bp|location=Sequence derived from alignment at Contig_3:1770778..1771224- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTGTTGCCGCAGACGTATATGTCAGCTTTCATGGAGGAGCTGGTGGCAGTback to top protein sequence of jgi.p|Trimin1|147292 >Trimin1|147292|gw1.3.329.1 ID=Trimin1|147292|gw1.3.329.1|Name=jgi.p|Trimin1|147292|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=149bp LLPQTYMSAFMEELVAVLLKNSNLLPAQRIHVRLASNFNMPPAFKATFYPback to top mRNA from alignment at Contig_3:1770778..1771224- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_475 ID=mRNA_475|Name=jgi.p|Trimin1|147292|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=447bp|location=Sequence derived from alignment at Contig_3:1770778..1771224- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:1770778..1771224- >mRNA_475 ID=mRNA_475|Name=jgi.p|Trimin1|147292|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=447bp|location=Sequence derived from alignment at Contig_3:1770778..1771224- (Tribonema minus UTEX_B_3156 )back to top |