mRNA_4704 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|160030
Unique NamemRNA_4704
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: A0A835ZIF0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIF0_9STRA)

HSP 1 Score: 625 bits (1613), Expect = 1.300e-226
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1
Query:    1 MALCVCSRDDRGRPGLIDPHRFSASQGYDDSDDRIGLYDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATARGGQVCC 927
            MALCVCSRDDRGRPGLIDPHRFSASQGYDDSDDRIGLYDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATARGGQVCC
Sbjct:    1 MALCVCSRDDRGRPGLIDPHRFSASQGYDDSDDRIGLYDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATARGGQVCC 309          
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: A0A7S1TSS1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSS1_9STRA)

HSP 1 Score: 422 bits (1084), Expect = 8.250e-145
Identity = 205/270 (75.93%), Postives = 228/270 (84.44%), Query Frame = 1
Query:  100 RIGLYDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATAR 909
            R+  YDI+KPIGKGKFAIVYRA R SDG  VALKKI +D MD K R K LKEVRLLQSL+HPNII YLDSF+ G+EL+IV EWAAAGDLKRQ+RKA E+  +FEERVVWKYF+QI   I HMH+RR+MHRDLKPANIFLTL GQ+KVGDLGLGRA+SE T+EAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGC+LYELAML+SPFK EGLNLYSLFQKIS+GDY PLP  YSEDLR LAYAMI TE   RPD+  +   A +MR  T +
Sbjct:   21 RMDAYDIMKPIGKGKFAIVYRAQRKSDGAIVALKKIQVDDMDQKQRDKCLKEVRLLQSLDHPNIIRYLDSFIEGSELIIVVEWAAAGDLKRQLRKALEKQTHFEERVVWKYFSQIAEAIAHMHSRRIMHRDLKPANIFLTLNGQVKVGDLGLGRAMSEHTMEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCLLYELAMLKSPFKSEGLNLYSLFQKISRGDYQPLPDFYSEDLRNLAYAMIRTEAQERPDIAEIVRFAQKMRYMTTQ 290          
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: A0A7S2C573_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C573_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 1.480e-143
Identity = 196/265 (73.96%), Postives = 229/265 (86.42%), Query Frame = 1
Query:  112 YDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATA 906
            Y+++KPIGKGKFA+VYRA R +D   VALKKIS+D+MDAK R K LKEVRLLQSL HPN+I YLDSF+ GNEL+I+FEWAAAGDLKRQ+RKAQER   FEERV+W+YFAQIC  IQHMH RR+MHRDLKPANIFLTL G +KVGDLGLGR LSE T+EAHSKVGTPLYMSPEVLRG GYD++SD+WS+GC+LYELAML+SPFK EGLNLYSLFQKIS+ D+ PLP HYSEDLR LAY+MI+ +P +RP +E VC +A  M+  T+
Sbjct:   32 YEVIKPIGKGKFAVVYRARRKADDAIVALKKISVDAMDAKARNKCLKEVRLLQSLRHPNVIEYLDSFIEGNELIIIFEWAAAGDLKRQIRKAQEREARFEERVIWRYFAQICEAIQHMHERRIMHRDLKPANIFLTLNGTVKVGDLGLGRELSEHTVEAHSKVGTPLYMSPEVLRGDGYDFRSDVWSVGCLLYELAMLKSPFKSEGLNLYSLFQKISKADFQPLPVHYSEDLRNLAYSMINIDPQQRPRMEEVCEIAQAMKAKTS 296          
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: F0Y2C1_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2C1_AURAN)

HSP 1 Score: 407 bits (1045), Expect = 1.050e-140
Identity = 195/264 (73.86%), Postives = 224/264 (84.85%), Query Frame = 1
Query:  112 YDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREAT 903
            Y+++KPIGKGKFA+VYRA R++D E VALKKI++DSMD + R+K LKEVRLLQSL+HPNII YLDS + G+ELVIVFEWAAAGDLKRQ+RKA ER   FEERV+WKYF+QIC  + HMH +R++HRDLKPAN+FLTL G +KVGDLGLGR +SE T EAHSKVGTPLYMSPEVLRG GYDWKSD+WSLGC+LYELAMLRSPFK EGLNLYSLFQKIS+ DY PLP  YS  LR LA AM+S +P  RPDV  VC VA RMR+ T
Sbjct:    4 YELIKPIGKGKFAVVYRARRIADDELVALKKIAVDSMDHRAREKCLKEVRLLQSLHHPNIIRYLDSLIEGDELVIVFEWAAAGDLKRQIRKAVERKQGFEERVIWKYFSQICDALAHMHEQRILHRDLKPANVFLTLNGTVKVGDLGLGRMMSEHTFEAHSKVGTPLYMSPEVLRGDGYDWKSDVWSLGCVLYELAMLRSPFKAEGLNLYSLFQKISKADYEPLPDTYSAPLRDLATAMLSVDPAERPDVAYVCDVATRMRKET 267          
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: A0A7R9UDR5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDR5_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 2.390e-132
Identity = 197/269 (73.23%), Postives = 230/269 (85.50%), Query Frame = 1
Query:  112 YDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATARGGQ 918
            Y+ LKPIGKGKFAIVYRA+R SDG  VALKKI++  MDA+ R+K LKEVRLLQSL+HPNII Y+DSF+  ++L+IV EWAAAGDLKRQ+RKA ++ V+ EERVVWKYF+QI   I+HMH+RR+MHRDLKPANIFLTL GQ+KVGDLGLGRA+SE T+EAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGC+LYELAML+SPFK EGLNLYSLFQKIS+GDY PLP  YS +LR L  AMI T+P  RPD+E +   ++RMR  TA+  Q
Sbjct:   19 YENLKPIGKGKFAIVYRATRKSDGADVALKKITVGEMDAQQREKCLKEVRLLQSLDHPNIIEYMDSFIVDSDLIIVVEWAAAGDLKRQLRKAVDKEVHLEERVVWKYFSQIAEAIEHMHSRRIMHRDLKPANIFLTLSGQVKVGDLGLGRAMSEHTMEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCLLYELAMLKSPFKSEGLNLYSLFQKISRGDYLPLPDRYSNELRSLVDAMIQTDPSERPDIEQIVEYSNRMRALTAQRRQ 287          
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: A0A7S1GED1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GED1_9STRA)

HSP 1 Score: 382 bits (981), Expect = 4.770e-130
Identity = 186/273 (68.13%), Postives = 223/273 (81.68%), Query Frame = 1
Query:   94 DDRIGLYDILKPIGKGKFAIVYRASRVSDGETVALKKISI-DSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATAR 909
            D R+  Y+++KPIGKGKF+ VYRA     GE VALKKI I D MD K+R+K LKE+RL+Q L+HPNII YLDSF+  N+L +VFE+A AGDLKRQ+RKA+ER   F+ERV+WKYF+QI   ++HMH RRVMHRDLKPAN+FLTL G +KVGDLGLGR  SE T+EA+SKVGTPLYMSPEVLRG GY+WKSD+WSLGC+LYELAML SPFK EGLNLY LFQKI++GDYAP+ + YS +LR LA+ M+S +P  RPD+E VC VA RMRE T R
Sbjct:   27 DGRLAHYEVMKPIGKGKFSTVYRARAKDGGELVALKKIQIFDMMDEKSREKCLKEIRLVQQLDHPNIIRYLDSFIEDNQLHLVFEYAEAGDLKRQLRKAREREARFDERVIWKYFSQIAEALRHMHERRVMHRDLKPANVFLTLNGTVKVGDLGLGRHFSEATMEAYSKVGTPLYMSPEVLRGKGYEWKSDVWSLGCVLYELAMLTSPFKEEGLNLYGLFQKITKGDYAPVSSVYSPELRDLAHRMLSVDPDGRPDMEEVCEVARRMREHTQR 299          
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: A0A8J2WWI5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWI5_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 4.870e-130
Identity = 189/264 (71.59%), Postives = 224/264 (84.85%), Query Frame = 1
Query:  112 YDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREAT 903
            Y+++KPIGKGKFA+V+RA R+SD   VA+KKIS+DSMD K R+K LKEVRLLQSL H NI+ YLDS + G+EL+IVFEWAAAGDLKRQVRKA ERG  FEERV+WKYF+QIC  I HMH+RR++HRDLKPAN+FLTL+G +KVGDLGLGR +SE T EAHSKVGTPLYMSPEVLRG GYDWKSD+WSLGC+LYELA+L+SPFK EGL+LYSLFQKIS+GDYAP P HYS  LR+L  +M+S +   RPDV  V  +A++MR  T
Sbjct:    5 YELIKPIGKGKFAVVHRAKRLSDDSIVAVKKISVDSMDDKAREKCLKEVRLLQSLQHDNIVQYLDSSIDGDELIIVFEWAAAGDLKRQVRKANERGKPFEERVIWKYFSQICDAITHMHSRRILHRDLKPANVFLTLDGTVKVGDLGLGRMMSEHTFEAHSKVGTPLYMSPEVLRGDGYDWKSDVWSLGCVLYELAVLKSPFKAEGLDLYSLFQKISKGDYAPPPEHYSSTLRELCVSMLSVDAKDRPDVAHVTSIANKMRRET 268          
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: T0PV50_SAPDV (NEK protein kinase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PV50_SAPDV)

HSP 1 Score: 372 bits (954), Expect = 5.230e-124
Identity = 178/265 (67.17%), Postives = 212/265 (80.00%), Query Frame = 1
Query:  112 YDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATA 906
            Y ILKPIGKGKF++VYRA R++D   VALKKI+ID MD + R+K LKEVRL+QS++HPNII YLD+F++GNEL I FEWA AGDLKRQ+RKA E+    +ER+VWKYFAQI A I HMH  R+MHRD+KPANIFL   GQ+KVGDLGLGR LSE+T+EAHSKVGTPLYMSPEVLRG GYDWK D+WSLGCILYELAMLRSPFK EGLNLY LFQK+++G+Y P+   YS+ LR L   M+S     RP + A+C V+    E+ A
Sbjct:   21 YAILKPIGKGKFSVVYRAKRMADDVLVALKKIAIDVMDKRAREKTLKEVRLVQSVHHPNIIQYLDAFIAGNELCIAFEWAEAGDLKRQIRKANEKDTRLDERLVWKYFAQIAAAIDHMHTHRIMHRDIKPANIFLMSSGQVKVGDLGLGRHLSENTMEAHSKVGTPLYMSPEVLRGDGYDWKCDVWSLGCILYELAMLRSPFKSEGLNLYGLFQKVNKGEYDPVSDIYSDALRSLVTQMLSLNANDRPTMAAICAVSSACHESRA 285          
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: A0A1V9YVL4_9STRA (NimA-related protein kinase 6 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVL4_9STRA)

HSP 1 Score: 379 bits (972), Expect = 6.680e-124
Identity = 179/257 (69.65%), Postives = 213/257 (82.88%), Query Frame = 1
Query:  112 YDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVA 882
            YDILKPIGKGKF++VYRA R +D   VALKKISID MDA+ R K LKEVRL+QS++HPNII YLD+F++GNEL I FEWA AGDLKRQ+RKA E+   F+ER++WKYFAQ+ A I+HMH  R+MHRD+KPANIFL L GQ+KVGDLGLGR LSE+T+EAHSKVGTPLYMSPEVLRG GYDWK D+WSLGCILYELAMLRSPFK EGLNLY LFQK+++G+Y P+P  YS  L+ L   M+S     RP ++A+C V+
Sbjct:   21 YDILKPIGKGKFSVVYRAKRNADEVLVALKKISIDLMDARARGKTLKEVRLVQSVHHPNIIQYLDAFIAGNELCIAFEWAEAGDLKRQIRKANEKNTRFDERLIWKYFAQVAAAIEHMHLHRIMHRDIKPANIFLMLSGQVKVGDLGLGRHLSENTMEAHSKVGTPLYMSPEVLRGDGYDWKCDVWSLGCILYELAMLRSPFKSEGLNLYGLFQKVNKGEYDPVPAIYSPALQSLVTQMLSLNANDRPTMDAICAVS 277          
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Match: A0A067CV70_SAPPC (NEK protein kinase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CV70_SAPPC)

HSP 1 Score: 377 bits (967), Expect = 1.640e-122
Identity = 188/294 (63.95%), Postives = 226/294 (76.87%), Query Frame = 1
Query:   28 DRGRPGLIDPHRFSASQ-GYDDSDDRIGLYDILKPIGKGKFAIVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISYLDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICAGIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKVGTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLFQKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREATA 906
            DR R G ++   FS +Q     S   +  Y ILKPIGKGKF++VYRA R++D   VALKKI+ID MD + R+K LKEVRL+QS++HPNII YLD+F++GNEL I FEWA AGDLKRQ+RKA E+   F+ER+VWKYFAQI A I HMH  R+MHRD+KPANIFLT  GQ+KVGDLGLGR LSE+T+EAHSKVGTPLYMSPEVLRG GYDWK D+WSLGCILYELAMLRSPFK EGLNLY LFQK+++G+Y P+   YS+ LR L   M+S     RP + A+C V+    E+ A
Sbjct:   34 DRERSGCMEA--FSDAQVALFASGGALTDYAILKPIGKGKFSVVYRAKRMADDVLVALKKIAIDVMDKRAREKTLKEVRLVQSVHHPNIIQYLDAFIAGNELCIAFEWAEAGDLKRQIRKANEKDTRFDERLVWKYFAQIAAAIDHMHTHRIMHRDIKPANIFLTSSGQVKVGDLGLGRHLSENTMEAHSKVGTPLYMSPEVLRGDGYDWKCDVWSLGCILYELAMLRSPFKSEGLNLYGLFQKVNKGEYDPVSDIYSDALRSLVTQMLSLNANDRPTMAAICAVSSACHESRA 325          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160030 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZIF0_9STRA1.300e-226100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S1TSS1_9STRA8.250e-14575.93Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A7S2C573_9STRA1.480e-14373.96Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
F0Y2C1_AURAN1.050e-14073.86Protein kinase domain-containing protein (Fragment... [more]
A0A7R9UDR5_9STRA2.390e-13273.23Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1GED1_9STRA4.770e-13068.13Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A8J2WWI5_9STRA4.870e-13071.59Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
T0PV50_SAPDV5.230e-12467.17NEK protein kinase n=1 Tax=Saprolegnia diclina (st... [more]
A0A1V9YVL4_9STRA6.680e-12469.65NimA-related protein kinase 6 n=1 Tax=Achlya hypog... [more]
A0A067CV70_SAPPC1.640e-12263.95NEK protein kinase n=1 Tax=Saprolegnia parasitica ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_11contigContig_11:101393..104973 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|160030|e_gw1.11.26.1
KEGG TC1.I.1.1.3
BRITEko00000,ko00001,ko01000,ko01001,ko03036,ko03400
KEGG Pathwayko04621,map04621
KEGG koko:K08857,ko:K20875,ko:K20876
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0591@1|root,KOG0591@2759|Eukaryota
Evalue1.72e-141
Seed ortholog44056.XP_009034143.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-12_003980.1
TranscriptId160352
TrackFilteredModels1
ProteinId160030
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160030gene_4704Tribonema minus UTEX_B_3156 geneContig_11 101393..104973 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160030Trimin1|160030|e_gw1.11.26.1Tribonema minus UTEX_B_3156 polypeptideContig_11 101393..104973 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4704_4exon_4704_4Tribonema minus UTEX_B_3156 exonContig_11 101393..101725 -
exon_4704_3exon_4704_3Tribonema minus UTEX_B_3156 exonContig_11 102722..102943 -
exon_4704_2exon_4704_2Tribonema minus UTEX_B_3156 exonContig_11 104041..104172 -
exon_4704_1exon_4704_1Tribonema minus UTEX_B_3156 exonContig_11 104731..104973 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4704CDS_4704Tribonema minus UTEX_B_3156 CDSContig_11 104731..104973 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4704 ID=mRNA_4704|Name=jgi.p|Trimin1|160030|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=930bp|location=Sequence derived from alignment at Contig_11:101393..104973- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCTTGTGTGTCTGCAGCCGTGATGATAGAGGCAGGCCAGGACTGAT
TGATCCTCACCGCTTCTCTGCCTCTCAGGGATACGATGACAGTGACGATC
GCATAGGCCTGTATGACATTTTGAAGCCCATAGGCAAGGGGAAGTTCGCC
ATCGTGTATCGGGCGAGCAGGGTTTCTGATGGCGAGACAGTCGCCCTCAA
GAAAATCTCAATTGACTCCATGGATGCCAAGAACAGGAAGAAGGTGCTGA
AAGAGGTGCGGCTGCTGCAGTCGCTAAATCACCCCAACATCATCAGCTAC
CTCGACAGCTTCCTCTCCGGCAACGAGCTGGTGATCGTGTTCGAGTGGGC
CGCTGCCGGCGACCTGAAGCGGCAGGTGCGCAAGGCGCAGGAGCGCGGCG
TGTACTTTGAGGAGCGCGTCGTGTGGAAGTACTTTGCGCAGATCTGCGCG
GGCATACAGCACATGCACGCGCGCCGCGTCATGCACCGCGACCTCAAGCC
CGCCAACATCTTCCTCACGCTGGAGGGGCAGATCAAGGTGGGGGACCTGG
GGCTGGGGCGCGCGCTGAGCGAGGACACGCTGGAGGCGCACAGCAAGGTG
GGAACCCCCCTATACATGAGCCCAGAGGTGCTGCGCGGGGGCGGCTACGA
CTGGAAGAGCGACATCTGGTCCCTCGGCTGCATCCTGTACGAGCTGGCTA
TGCTCCGGAGCCCCTTCAAGGGGGAGGGGCTCAACCTCTACAGCCTCTTT
CAGAAGATCAGCCAGGGGGACTACGCGCCCCTGCCGACGCACTACAGCGA
GGACCTTCGGCAGCTGGCGTATGCCATGATCAGCACGGAGCCCGTGCGGC
GCCCGGACGTGGAGGCGGTGTGTCTGGTGGCGGACAGGATGCGGGAGGCC
ACGGCCAGGGGGGGGCAGGTATGTTGCTGA
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protein sequence of jgi.p|Trimin1|160030

>Trimin1|160030|e_gw1.11.26.1 ID=Trimin1|160030|e_gw1.11.26.1|Name=jgi.p|Trimin1|160030|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=310bp
MALCVCSRDDRGRPGLIDPHRFSASQGYDDSDDRIGLYDILKPIGKGKFA
IVYRASRVSDGETVALKKISIDSMDAKNRKKVLKEVRLLQSLNHPNIISY
LDSFLSGNELVIVFEWAAAGDLKRQVRKAQERGVYFEERVVWKYFAQICA
GIQHMHARRVMHRDLKPANIFLTLEGQIKVGDLGLGRALSEDTLEAHSKV
GTPLYMSPEVLRGGGYDWKSDIWSLGCILYELAMLRSPFKGEGLNLYSLF
QKISQGDYAPLPTHYSEDLRQLAYAMISTEPVRRPDVEAVCLVADRMREA
TARGGQVCC*
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mRNA from alignment at Contig_11:101393..104973-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4704 ID=mRNA_4704|Name=jgi.p|Trimin1|160030|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3581bp|location=Sequence derived from alignment at Contig_11:101393..104973- (Tribonema minus UTEX_B_3156 )
ATGGCCTTGTGTGTCTGCAGCCGTGATGATAGAGGCAGGCCAGGACTGAT TGATCCTCACCGCTTCTCTGCCTCTCAGGGATACGATGACAGTGACGATC GCATAGGCCTGTATGACATTTTGAAGCCCATAGGCAAGGGGAAGTTCGCC ATCGTGTATCGGGCGAGCAGGGTTTCTGATGGCGAGACAGTCGCCCTCAA GAAAATCTCAATTGACTCCATGGATGCCAAGAACAGGAAGAAGGTGAGAT CATGCCAGCAGATGTGCACAATGTTGGTGGAGCTCGTCCCTGCCTGGTGC TGCTGGCTGGTGCTGAGCTTGAGTGCGTTGCGTGCATGGTCAGCGTTCAA CGCAGGCAATCATGGTCGCAAAGCCGGTACAAGATGGCTGAATTCAAAAT TGAAGCTGCACCCAGGTTTTGTGAATCAAGTGGTACTTGACAGCACTTTG ACTTTGCCCTTGGTCATCAACAACTGCCACTTTTCAACTGCCACTTTGCC GTGCTCATTCTGCACAAGGTCTCTTAAAGTTATCGTGACGAAAGTTTGCG CTTTGACGCACCTTAATGCTGAGGGTACTGCAACTGAATGTTGAGATGTG CATTGCTGACTTCACGTGTACACACCGCAATGCGAAAGTTTGGAAGACAT GTGCACAGTGCCAGGGAGCTTTTAGCACGTGTATTCAGAATGCAGCATTC ACACACGCCGTGTACCGATAAGCATGCCCTTGCTACACTTCAATTTGAAG TTATGTGTCCTCGCGCTGCATCACCGCTCATCTGCGCCCCCCGTGCGTCA GGTGCTGAAAGAGGTGCGGCTGCTGCAGTCGCTAAATCACCCCAACATCA TCAGCTACCTCGACAGCTTCCTCTCCGGCAACGAGCTGGTGATCGTGTTC GAGTGGGCCGCTGCCGGCGACCTGAAGCGGCAGGTGTGGACACGTCACAA CATGTCATATGGAACCGCATAATCTAGCACAGTGACAACATCTCAACAAC GGCCAGGCAGTAGTGCATGCTGTAATACTAACCCTAAGGCTAGCCTGATG CGGCACACATGTCAGCATGCATTTCTGTAAGTGTTCCTCAATGCTTGTGG GGTAGCAAATGGGAGCTCAGCTGCATGCACAGCTGCTGCAAACGCGCACA CGGCACCACAACTCGCCATCGCTTTGGCGCATCATGAAGTTGAAGTTGGC ATTGCAGGCTGAGGCGCAGGAGCGCGGCGTGTGCTTTTTGAGAAGCGCGT CACGTGTTGAACTTCTGTAGCATGGCTCCACACACTGGCAGTGGCATGCG CGTACATAGGCACTGCGCGGCATCACCGCTCATGACAGTGCTCAATCTCA ATGTCACATCACGAACGCGCCACAACCGCATTCGCAAGGCCCAGGAGCGC GGCTTGTTCTTTGAAGAGTGCATCATGTGTTGAAGTTCTTTCAGTATGGC TCCACACTGGCATACGGCGCATGCGTGCAGAGGTGCCATCATGACAGCGC TTAATGCTCAATCACGGACGCTCCGCAACCGCTGCGCAGGTTTACAAGGC GCAGGGGCTACTTTGAGAAGCGCGTCACATGTTGAATTTTTGTAGCATGG CTCCACACTGGCATACAGCACACGCGTGCATAGGTGCCGCACGACATTGC CCCTCACAACTGTGCTCAATTTTCAATGACAAACGCGCCGCAATCGCTGA GGGGAGGGTCGCAAGGCGCAGGAGCGCGGCGTGTACTTGGAGTGAGGAGC GCGTCACATGTTTAAGTTCTTTTAGCATGGCTCTCCACTGCATACGGCAC ACGCGTACATACTTGCCAGCGCTTAATGCTCCATCACAAACGCACTGCAT CCAACCGCTGCGCAGGTGCGCAAGGCGCAGGAGCGCGGCGTGTACTTTGA GGAGCGCGTGGTGTGGAAGTACTCTCAGCATGGCTCCACTTTGGCATACG GCACATGCGTACATACCATCACCCCTCATGACAGTGCTCGTTGTCTCACC ACGAACGCGCCGCAACCAATCGTCGCGCAGGTGCGCAAGGCGCAGGAGCG CGGCGTGTACTTTGAGGAGCGCGTCGTGTGGAAGTACTTTGCGCAGATCT GCGCGGGCATACAGCACATGCACGCGCGCCGCGTCATGCACCGCGACCTC AAGCCCGCCAACATCTTCCTCACGCTGGAGGGGCAGATCAAGGTGGGGGA CCTGGGGCTGGGGCGCGCGCTGAGCGAGGACACGCTGGAGGCGCACAGCA AGGTATGTAGGTATACACTATGCAACGCATATGCACAGCAAGGTATGTAG GTATGCTAGACACTGTGTAACGCATATGCACAGCAAGGTATGTAGGTATA TGCTTACCATAACTCAACCCATGTCGAGGACGCGCTGGAGGCCCACAGCA AGGTATGTAGGTATATGCTCACGCTAGCAAGGTATGTAGGTATATGCTGA CGCTAAACCTATCTCTGACCCATATCGAGGACACGCTGGAGGCGCACAGC AAGGTATGTAGGTATATGCTCACGCTAGCAAGGTATGTAGGTATACGCTA ACGCTAACCCTAACTCTGACCCATATCGAGGACACGCTGGAGGCGCACAG CAAGGTATGTAGGTATATGCTAACGCTAACCCTAAGTCTAATCCATATGT GGGCTCACAGCCAGTTTCAGCCAGCTCACTCTAATTCATCTGGTACCAAT AGCCGTAGTACATGGTAGAAAATATGTATTACTTCTAACTACATGATTGT AGGTATACCGTGGGCATGTGACCGTGCCGAATCAGTGGCGTGTGTCGCTG CAGCGATCGTGGAGAAACCAGAATGCAAGGTTCAACAGGCACGTCTGCGC TCAGCAGGACCAAACTTCAACTACTAACTTCAACATGCCGTTGAACGCCC CGGTGTTGCTCAGGTCGGAAAACCGCTGTACAGAATCTCATAGTGCTGCG CTTAGTTACCCCGCATAGCATGAGGGCATTGGCTCATGATGGCGCCAATG TCGTCGACTGCGTGCTCGCCAGCACGGCGGCAGTACGCATATATGCTCTC ATGACACTGTTGTTGATTGCCTGCGCCCTACATATTGTTGTGCCATGAGC CCGGAGTGCTGCGCGGCGGCGGCTATGACTGTGATAACACCCATGAATTA TGAAATCTGTATACTTCGAAGTATATATATACCTCAAGTAGATGCGATTT ACATCCTGCAAGTGCATGTAGTAACGTTGAGCGCCTGCGTGTTGCCAGGT GGGAACCCCCCTATACATGAGCCCAGAGGTGCTGCGCGGGGGCGGCTACG ACTGGAAGAGCGACATCTGGTCCCTCGGCTGCATCCTGTACGAGCTGGCT ATGCTCCGGAGCCCCTTCAAGGGGGAGGGGCTCAACCTCTACAGCCTCTT TCAGAAGATCAGCCAGGGGGACTACGCGCCCCTGCCGACGCACTACAGCG AGGACCTTCGGCAGCTGGCGTATGCCATGATCAGCACGGAGCCCGTGCGG CGCCCGGACGTGGAGGCGGTGTGTCTGGTGGCGGACAGGATGCGGGAGGC CACGGCCAGGGGGGGGCAGGTATGTTGCTGA
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Coding sequence (CDS) from alignment at Contig_11:101393..104973-

>mRNA_4704 ID=mRNA_4704|Name=jgi.p|Trimin1|160030|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=930bp|location=Sequence derived from alignment at Contig_11:101393..104973- (Tribonema minus UTEX_B_3156 )
ATGGCCTTGTGTGTCTGCAGCCGTGATGATAGAGGCAGGCCAGGACTGAT
TGATCCTCACCGCTTCTCTGCCTCTCAGGGATACGATGACAGTGACGATC
GCATAGGCCTGTATGACATTTTGAAGCCCATAGGCAAGGGGAAGTTCGCC
ATCGTGTATCGGGCGAGCAGGGTTTCTGATGGCGAGACAGTCGCCCTCAA
GAAAATCTCAATTGACTCCATGGATGCCAAGAACAGGAAGAAGGTGCTGA
AAGAGGTGCGGCTGCTGCAGTCGCTAAATCACCCCAACATCATCAGCTAC
CTCGACAGCTTCCTCTCCGGCAACGAGCTGGTGATCGTGTTCGAGTGGGC
CGCTGCCGGCGACCTGAAGCGGCAGGTGCGCAAGGCGCAGGAGCGCGGCG
TGTACTTTGAGGAGCGCGTCGTGTGGAAGTACTTTGCGCAGATCTGCGCG
GGCATACAGCACATGCACGCGCGCCGCGTCATGCACCGCGACCTCAAGCC
CGCCAACATCTTCCTCACGCTGGAGGGGCAGATCAAGGTGGGGGACCTGG
GGCTGGGGCGCGCGCTGAGCGAGGACACGCTGGAGGCGCACAGCAAGGTG
GGAACCCCCCTATACATGAGCCCAGAGGTGCTGCGCGGGGGCGGCTACGA
CTGGAAGAGCGACATCTGGTCCCTCGGCTGCATCCTGTACGAGCTGGCTA
TGCTCCGGAGCCCCTTCAAGGGGGAGGGGCTCAACCTCTACAGCCTCTTT
CAGAAGATCAGCCAGGGGGACTACGCGCCCCTGCCGACGCACTACAGCGA
GGACCTTCGGCAGCTGGCGTATGCCATGATCAGCACGGAGCCCGTGCGGC
GCCCGGACGTGGAGGCGGTGTGTCTGGTGGCGGACAGGATGCGGGAGGCC
ACGGCCAGGGGGGGGCAGGTATGTTGCTGA
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