mRNA_438 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: A0A836CE87_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE87_9STRA) HSP 1 Score: 342 bits (878), Expect = 2.050e-119 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMYRR 492 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMYRR Sbjct: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMYRR 164
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: A0A8J2T1V8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1V8_9STRA) HSP 1 Score: 163 bits (413), Expect = 9.970e-46 Identity = 72/161 (44.72%), Postives = 108/161 (67.08%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNM 483 F +D D +G +D EF ++ +RTPLT+ +F ++ D G ++F ++ ++LTYC++T+ IL+FCF +D + + I+E FM LL TVNN +P+FPGN AL FD N DGLIDF EFK ++ RYP++ FP +RLQD MQ+ LGE+ W L +++ Sbjct: 178 FDEIDVDQSGSMDAVEFFDMLDEERTPLTDELFALMDLDGSGTIEFDEFIAVLLTYCMYTKDDILRFCFDTFDKDKSNSIDENEFMALLSTVNNGAPLFPGNMGTALMNFDSNDDGLIDFQEFKVIETRYPMIFFPAFRLQDRMQQKTLGETRWRDLMKSV 338
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: K3WVM9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVM9_GLOUD) HSP 1 Score: 159 bits (402), Expect = 2.570e-44 Identity = 74/164 (45.12%), Postives = 106/164 (64.63%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMYRR 492 F+ +D D +G +D +EF +I+ +TP +E + + ++ YC++TR +ILQF F +D TG I E F L+ VN+ PVFPGNF+ AL EFD+NKDGL+DF EFK M+KRYP+LLFP +RLQD MQK+ LGES W++L + +Y++ Sbjct: 191 FKQIDLDASGVIDYDEFFEFIDETKTPFSEGLXXXXXXXXXXXXXXXXXVHAMVLYCMYTRDEILQFAFDTFDPAKTGSIGEKEFKRLISVVNDGKPVFPGNFKNALSEFDRNKDGLLDFEEFKIMNKRYPMLLFPCFRLQDRMQKSTLGESHWLQLHKRLYQK 354
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: D0NZ23_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NZ23_PHYIT) HSP 1 Score: 152 bits (383), Expect = 4.240e-43 Identity = 70/164 (42.68%), Postives = 108/164 (65.85%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMYRR 492 FR +D DG +D +EF +I+ +TP +E +F ++ +D +G +DF ++ + YC++TR +IL+F F +D +G I + L+ VN+ F GN AL EFD+NKDG+IDF EFK ++KR+P+LLFP +RLQD MQKA LG++ W++L + +Y R Sbjct: 41 FRQIDLDGV--IDYDEFFNFIDETKTPFSEGLFRMIDSDSNGTIDFEEFVHATVLYCMYTRDEILRFAFDTFDPAASGSIGDKELRRLVSIVNDGQSRFSGNINTALTEFDRNKDGVIDFEEFKNLNKRFPMLLFPCFRLQDRMQKATLGDNHWLQLHKRLYER 202
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: A0A8K1CRP4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRP4_PYTOL) HSP 1 Score: 159 bits (403), Expect = 2.860e-42 Identity = 75/164 (45.73%), Postives = 105/164 (64.02%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMYRR 492 F +D D +G +D +EF +I+ ++TP +E +F + ++ YC++TR +ILQF F +D TG I E F L+ VN+ P FPGNF+ AL EFD+NKDG++DF EFK M+KRYPLLLFP +RLQD MQK+ LGE+ W+KL + +Y R Sbjct: 748 FSQIDLDQSGVIDYDEFFEFIDERKTPFSEGLFRXXXXXXXXXXXXXXXVHAMVLYCMYTRDEILQFAFDTFDPGKTGSIGEKEFKRLISVVNDGKPAFPGNFKNALNEFDRNKDGVLDFEEFKLMNKRYPLLLFPCFRLQDRMQKSTLGEAHWLKLHRRLYDR 911
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: A0A7S3ZNR4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNR4_9STRA) HSP 1 Score: 152 bits (384), Expect = 7.320e-42 Identity = 67/161 (41.61%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNM 483 F +D DG+G +D E + R+ +TE +F ++ D + LDF ++ + L+YC++T+ IL+FCF +D ++ G I+E F E+ V+ P+F GNF++ALE FD N DGLIDF+EF+ ++ RYP++L P +R+QD +QK LGE WVK+ +N+ Sbjct: 141 FDDIDVDGSGNIDAVELFEAMGEVRSKITEELFAMMDMDGNARLDFDEYVAVALSYCMYTKDDILKFCFDLFDLDSGGTIDEKEFTEMCVAVSAGDPLFSGNFRMALENFDTNDDGLIDFDEFRNLNDRYPMILHPAFRMQDKLQKYTLGEEEWVKVMENI 301
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: A0A6H5JH61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH61_9PHAE) HSP 1 Score: 145 bits (366), Expect = 2.630e-40 Identity = 72/164 (43.90%), Postives = 100/164 (60.98%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMYRR 492 F S+D TG V C E L + ++P T+ +F +VG P G+L F +++TYC+F++ IL F F QYD++++G I+E F EL TVNNASP+FPGNF AL +F AMDK +PLL FP +RLQD++QK LG + WVK Q+ + R Sbjct: 73 FESIDVGNTGTVFCYEVLSAVGIAQSPFTDNLFRLVGVHPEGSLSFCQLCRILMTYCVFSKEDILLFLFRQYDTDDSGAIDESEFRELAKTVNNASPMFPGNFAKALLDFXXXXXXXXXXXXXXAMDKAFPLLFFPAFRLQDSLQKFFLGSTFWVKAQEGVLAR 236
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: A0A485KUA1_9STRA (Aste57867_11925 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUA1_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.580e-39 Identity = 61/162 (37.65%), Postives = 107/162 (66.05%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMY 486 F +D D G +D +EF +I+ RTP + ++ + G +DF ++ + TYC++TR +IL+F F +D++ +G I+E F + +N+ SP+F N++ A+ +FD+N DG++DF+EF+ ++KRYP+L FP +R+Q+AMQKA LG + W++L + + Sbjct: 147 FNHVDMDRAGTIDYDEFFEFIDETRTPFCDKFLKMIDINGDGVIDFEEFVHALTTYCMYTRDEILKFAFECFDTDESGSIDEMEFKIMAGMINDGSPLFRINYEKAMHDFDKNNDGVLDFDEFQLLNKRYPMLFFPCFRMQEAMQKATLGVAHWLRLHERYF 308
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: A0A2P4YTF2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YTF2_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.630e-39 Identity = 69/164 (42.07%), Postives = 99/164 (60.37%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMYRR 492 FR +D D +G +DC+EF +I+ +TP +E + + + YC++TR +IL+F F +D TG I + L+ VN+ F GN AL EFD+NKDG+IDF EFK M+KR+P+LLFP +RLQD MQKA LG+S W++L + +Y R Sbjct: 140 FRQIDLDASGVIDCDEFFEFIDETKTPFSEGLXXXXXXXXXXXXXXXXXVHATVLYCMYTRYEILRFAFDTFDPAATGSIGDKELRRLVSMVNDGQAKFTGNINNALSEFDRNKDGVIDFEEFKNMNKRFPMLLFPCFRLQDRMQKATLGDSHWLQLHKRLYER 303
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Match: A0A6G0X0P8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0P8_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.850e-38 Identity = 61/162 (37.65%), Postives = 104/162 (64.20%), Query Frame = 1 Query: 1 FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLVLVLTYCLFTRAQILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFDQNKDGLIDFNEFKAMDKRYPLLLFPVYRLQDAMQKACLGESAWVKLQQNMY 486 F +D + EEF +I+ R P +E +F ++ A+ +G +DF ++ + YC+FTR +ILQF F +D +++G I+E F +L + VN+ P+F GNF AL++FD+ DG+I F F +++RYP++LFP ++LQ+ +Q+A LGE W+++ + Y Sbjct: 119 FHYIDITKEEEISYEEFFEFIDEHRNPYSESLFKMIDANGNGKIDFEEFVYALTMYCMFTREEILQFAFRTFDQDDSGTIDETEFRKLAEMVNDGKPLFAGNFNKALKDFDKKNDGVITFEGFDLLNRRYPMILFPCFQLQERIQRATLGEKHWLRIHERYY 280 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149256 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_438 ID=mRNA_438|Name=jgi.p|Trimin1|149256|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=492bp|location=Sequence derived from alignment at Contig_3:1518958..1520642- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TTCCGCAGCCTCGACTCCGACGGCACCGGCCGTGTCGACTGTGAGGAGTTback to top protein sequence of jgi.p|Trimin1|149256 >Trimin1|149256|gw1.3.358.1 ID=Trimin1|149256|gw1.3.358.1|Name=jgi.p|Trimin1|149256|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=164bp FRSLDSDGTGRVDCEEFLWYINAQRTPLTELVFGIVGADPHGALDFSAWLback to top mRNA from alignment at Contig_3:1518958..1520642- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_438 ID=mRNA_438|Name=jgi.p|Trimin1|149256|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1685bp|location=Sequence derived from alignment at Contig_3:1518958..1520642- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:1518958..1520642- >mRNA_438 ID=mRNA_438|Name=jgi.p|Trimin1|149256|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=492bp|location=Sequence derived from alignment at Contig_3:1518958..1520642- (Tribonema minus UTEX_B_3156 )back to top |