mRNA_4355 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: A0A835ZII9_9STRA (Nitroreductase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZII9_9STRA) HSP 1 Score: 313 bits (802), Expect = 6.650e-108 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1
Query: 1 QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDDGSGGVDGARARGTEAWAFKMTGFAAQTYLLGMAAHGESERRRNAIYV 483
QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDDGSGGVDGARARGTEAWAFKMTGFAAQTYLLGMAAHGESERRRNAIYV
Sbjct: 1 QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDDGSGGVDGARARGTEAWAFKMTGFAAQTYLLGMAAHGESERRRNAIYV 161
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: A0A835Z3C4_9STRA (Putative nitroreductase family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C4_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.140e-32 Identity = 74/166 (44.58%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 1 QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKL--MQGYSGDDGSG------GVDGARA--------RGTEAWAFKMTGFAAQTYLLGMAAHG 450
QAR AAK FLPD +PE ++ +VLA T+R P+SFN QPWAC+IVR QK+ALA AM+G N +++ APLTA+F AD+ P+ R + AG + + +L M G G +G+ GV A + TEAW++K G AAQTYLL AHG
Sbjct: 1 QARHAAKRFLPDAVPEDIINDVLAMTIRTPTSFNAQPWACIIVRDEEQKEALAQAMVGPNIMKVRAAPLTAVFLADLQPTRRVPRMMEEERRAGTPE---ERVARLPAMIGLFGGEGAAAEALRRGVTAALSPLKPMPSVTSTEAWSYKHAGLAAQTYLLAATAHG 163
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: A0A3R7NF45_9STRA (Nitroreductase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NF45_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.220e-26 Identity = 64/163 (39.26%), Postives = 94/163 (57.67%), Query Frame = 1
Query: 1 QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDD-GSGGVDGARARG------------TEAWAFKMTGFAAQTYLLGMAAHG 450
Q R A K FLPDP+PE ++E+L TLRAP+ FN QP+ACV+VR A ++ LA AM+ N ++K AP+ +F AD P+ R +++ A G ++ + +N+ +++ +SG+ + G+ A A TEAWAFK T FAA T L HG
Sbjct: 35 QDRYACKAFLPDPVPEQTLQEILKLTLRAPTGFNTQPYACVVVRKQADREKLAEAMMASNVRKVKEAPVVVVFAADCEPTKRVPRLQKLAADNGASTDLVNNLPHVVRLFSGEGVAASGIRAAIATAVSPLQPAPSNVSTEAWAFKQTTFAAATLLYAAQEHG 197
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: A0A2P4YJH6_9STRA (Nitroreductase family n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJH6_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.940e-24 Identity = 64/183 (34.97%), Postives = 98/183 (53.55%), Query Frame = 1
Query: 1 QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDDG-SGGVDGARAR------------GTEAWAFKMTGFAAQTYLLGMAAHG---------ESERRRNAIYV 483
+ R A K FLPDP+P+ ++E+L TLRAP+ FN P+ACV+VR ++ LA AM+ NA ++K AP+ +F AD+ PS R +++ G + N+ +++ +SG+ + G+ A A TEAW+FK T FAA T+L HG + R RNA+ +
Sbjct: 33 EERYACKAFLPDPVPDETLKEILQLTLRAPTGFNTMPYACVLVREQKDREKLAEAMMDSNARKVKEAPVVVVFAADLEPSKRVPRLQKLAHDNGAPADFVSNMPHVVRLFSGEGAVASGLRAALATVVSPLLPSPSNVSTEAWSFKQTTFAAATFLYAAQVHGLATCPMEGFDQVRVRNALDI 215
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: A0A225VC66_9STRA (Nitroreductase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VC66_9STRA) HSP 1 Score: 100 bits (249), Expect = 8.830e-23 Identity = 61/165 (36.97%), Postives = 88/165 (53.33%), Query Frame = 1
Query: 7 RCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDDGSGGVDGARARG-----------------TEAWAFKMTGFAAQTYLLGMAAHG 450
R A K FLP P+P+ +RE+L TLR P+ FN P+ACV+VR ++ LA AM+ N ++K AP+ A+F AD+ PS R +++ G + N+ +++ +SG+ GV + R TEAWAFK T FAA T+L AHG
Sbjct: 44 RYACKAFLPTPVPDETLREILKLTLRGPTCFNTMPYACVLVREQKDREKLAEAMMDSNVRKVKEAPVVAVFAADLEPSQRVPRLQQLAHDHGASVDFVSNLPHVVRLFSGE----GVIASALRAAIATAMSPLQPVPSNVSTEAWAFKQTAFAAATFLYAAQAHG 204
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: D0NC21_PHYIT (Nitroreductase family, putative n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NC21_PHYIT) HSP 1 Score: 99.0 bits (245), Expect = 5.160e-22 Identity = 62/166 (37.35%), Postives = 90/166 (54.22%), Query Frame = 1
Query: 1 QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDDGSGGV--DGARAR---------------GTEAWAFKMTGFAAQTYLLGMAAH 447
+ R A K FLP P+P+ ++E+L TLRAP+ FN QP+ACV+VR ++ LA AM+ N ++K AP+ A+F AD+ PS R +++ G ++ N+ ++ +SG+ GV G RA TEAWAFK T AA T+L AH
Sbjct: 66 EERYACKAFLPAPVPDETLKEILKLTLRAPTGFNVQPYACVLVREPKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQQLAHDNGASADFVANLPHFVRLFSGE----GVVASGLRAAIATAVSPLLPVPSNVSTEAWAFKQTALAAATFLYAAQAH 227
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: W2YM79_PHYPR (Nitroreductase domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=W2YM79_PHYPR) HSP 1 Score: 97.8 bits (242), Expect = 7.660e-22 Identity = 60/167 (35.93%), Postives = 87/167 (52.10%), Query Frame = 1
Query: 1 QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDDGSGGVDGARARG-----------------TEAWAFKMTGFAAQTYLLGMAAHG 450
+ R A K FLP P+P ++E+L T RAP+ FN QP+ACV+VR ++ LA AM+ N ++K AP+ A+F AD+ PS R ++ G + N+ +++ +SG+ GV + R TEAWAFK T FAA T+L HG
Sbjct: 31 EERYACKAFLPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGAPADFVANMPHVVRLFSGE----GVVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHG 193
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: A0A225V3Q0_9STRA (Nitroreductase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225V3Q0_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.300e-21 Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 7 RCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDDGSGGVDGARARGTEAWAFKMTGFAAQTYLLGMAAHG 450
R A K FLPDP+P+ +RE+L T R+PS FN Q W C+++R+ + ALA AM+ N ++ AP+ +F AD PS +++ + G + I L++ +SG+ TEAWA+K T FAA T+L HG
Sbjct: 12 RYACKAFLPDPVPDHTLREILKLTQRSPSGFNTQSWICIVLRTPEDRAALANAMMDKNGRKVNEAPVVVVFAADCEPSKNVPRMQKLNRDNGAPDDFVNAIPPLVELFSGEHDPN-------VSTEAWAYKQTTFAAATFLYAAQVHG 152
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: D8LMQ3_ECTSI (Nitroreductase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMQ3_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 1.860e-21 Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 1
Query: 4 ARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGHNATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGLASSVSDNIVKLMQGYSGDDGSGGVDGARARGT-----------------EAWAFKMTGFAAQTYLLGMAAHG 450
+R AA F + + +RE++A T APSSFN QPW+ V+VR A ++ L+ AMLG NA ++ AP+TA+FCAD+ PS R + + + AG+ + + +SG+ GV G R EAW+FK T A QTY+L AHG
Sbjct: 77 SRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGE----GVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHG 238
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Match: A0A8J2SEC5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEC5_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.920e-21 Identity = 62/164 (37.80%), Postives = 86/164 (52.44%), Query Frame = 1
Query: 1 QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDALAPAMLGH-NATRMKIAPLTAIFCADVTPSARADAVRRNHAAAGL-ASSVSD------------NIVKLMQGYSGDDGSGGVDGARARGTEAWAFKMTGFAAQTYLLGMAAHG 450
Q AA + +PE+++ +++ T RAPSSFN QPW CV+VRSAAQ++ + A L N R+ APLTA+FCAD+ P+ V+ A G A V D + L++G + + S + G AWA+K AAQTYLL AHG
Sbjct: 29 QRHAAAAFDATRDVPEAILEDIMQLTRRAPSSFNIQPWTCVLVRSAAQRELVGRAALSESNRRRVMDAPLTAVFCADLEPAHALPRVKAEAIARGKDARQVEDLELAVGYYATHGKLASLVKGVAANALSPVAPAPQPEGRRAWAYKSAMLAAQTYLLAATAHG 192 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159640 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4355 ID=mRNA_4355|Name=jgi.p|Trimin1|159640|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=486bp|location=Sequence derived from alignment at Contig_10:1368996..1370551- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGGCCCGCTGCGCCGCCAAGTACTTCCTGCCAGACCCCATCCCAGAGTCback to top protein sequence of jgi.p|Trimin1|159640 >Trimin1|159640|e_gw1.10.145.1 ID=Trimin1|159640|e_gw1.10.145.1|Name=jgi.p|Trimin1|159640|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=162bp QARCAAKYFLPDPIPESVVREVLAATLRAPSSFNFQPWACVIVRSAAQKDback to top mRNA from alignment at Contig_10:1368996..1370551- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4355 ID=mRNA_4355|Name=jgi.p|Trimin1|159640|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1556bp|location=Sequence derived from alignment at Contig_10:1368996..1370551- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_10:1368996..1370551- >mRNA_4355 ID=mRNA_4355|Name=jgi.p|Trimin1|159640|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=486bp|location=Sequence derived from alignment at Contig_10:1368996..1370551- (Tribonema minus UTEX_B_3156 )back to top |