mRNA_4316 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|159754
Unique NamemRNA_4316
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: A0A835ZE42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE42_9STRA)

HSP 1 Score: 564 bits (1453), Expect = 2.110e-203
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 
Query:    1 MTGAKDIKRLSRWLPVRRIFAAVVFTWTATVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTLLSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAAAALRAPWAAAALAXXXXXXXAACA 822
            MTGAKDIKRLSRWLPVRRIFAAVVFTWTATVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTLLSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAAAALRAPWAAAALAXXXXXXXAACA
Sbjct:    1 MTGAKDIKRLSRWLPVRRIFAAVVFTWTATVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTLLSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAAAALRAPWAAAALAXXXXXXXAACA 274
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BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: D7FLG5_ECTSI (FZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG5_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 6.110e-78
Identity = 117/240 (48.75%), Postives = 155/240 (64.58%), Query Frame = 1 
Query:   55 IFAAVVFTWTATVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAP-TLLSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAAAALRAPW 771
            +  AV+    A+  GC + G DIG C T + +D  +RL   PFC  Y++Y+ C+PK  PLP SR+ P GRW N+T+  KD W+ +YY  IV  R+ +E DK LQK G DE+G  G+PVPRF++N DC+ AF+ Y C+ NFPRC ++   +L+TC SACEN+M+AC+  +D+WRCG S+Y NGY  E P T   G   YLRDF+PGQPF     E    + P  VCTPS+ GAAA    PW
Sbjct:   39 VVGAVLIAGCASSEGCYIHGADIGYCETSLYDDSEFRLAATPFCSSYIKYSTCVPKYDPLPASREFPDGRWVNNTLGIKDAWIEQYYNSIVNNRLEVEADKDLQKQGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDEN-SLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPVYLRDFFPGQPF--RDVEWAGGRQPEIVCTPSIKGAAAPSLQPW 275
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BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: A0A1V9YLP0_9STRA (FZ domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLP0_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.310e-63
Identity = 110/220 (50.00%), Postives = 136/220 (61.82%), Query Frame = 1 
Query:   85 ATVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTLL--SGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSL 738
            A+   CR+QG D GQC T    DE   LQ MPFCGP ++YTAC+P    L          W+NH+V  KD ++ + Y+++V +R   E+D SL  A RDE+G  G  VPRF+ N DC+DAFRN+ CW NFPRC ++ G +L+ C S CEN   AC   KDLWRCG  E++NGYSPE  T    SGV+ Y R  YPG PF  NAF     Q  LPVCTPSL
Sbjct:   12 ASTAACRIQGSDTGQCQTP---DEF--LQYMPFCGPLLQYTACVPMAQTL----------WYNHSVKSKDLFLSQMYQKLVMQRELFEQDLSLSDAKRDEWGNDGEIVPRFTENRDCQDAFRNFMCWLNFPRC-DDAGVSLIMCRSVCENYFKACMQHKDLWRCGDPEFVNGYSPEVSTYANNSGVLQYYRFPYPGSPFRTNAFSSDGTQA-LPVCTPSL 214
[Close]
BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: A0A7S3GVU4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVU4_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.220e-60
Identity = 102/219 (46.58%), Postives = 139/219 (63.47%), Query Frame = 1 
Query:  100 CRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQ-APLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTLLS-GVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAA 750
            C + G D G+C+T  A    +R   MP+C   V Y AC+PK+   LP SR+ P GRW N T+  KD +V    E +  ER+AIE++++L+KAG +E+G +G    RF   PDCR+AFRNY CW NFPRC      ++ TC SACEN  I+C   + LWRCG S+Y NGY PE P + + G V+YLR+++PGQPF  N +      + L +CTP++DGAA
Sbjct:   39 CYIAGTDSGECSTSTAV-LAWRQDNMPYCQFSVLYPACVPKEDLELPASREFPMGRW-NSTILMKDKYVERMTETLFIERIAIERNRTLRKAGVNEYGDKGRVRRRFYKKPDCRNAFRNYMCWINFPRCDVARDLSMPTCRSACENFFISCGYERGLWRCGKSKYFNGYEPEKPIISALGNVSYLREYFPGQPFRENKYSPKGNSE-LQICTPAIDGAA 254
[Close]
BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: A0A7S3UZ54_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ54_HETAK)

HSP 1 Score: 201 bits (512), Expect = 2.170e-60
Identity = 106/247 (42.91%), Postives = 141/247 (57.09%), Query Frame = 1 
Query:   64 AVVFTWTATVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEK-DKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLN----------------GYSPEAPTLLSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAAA 753
            A+VF   A V GC +QG D G C++D+ +D   R   MPFC  YV Y  C+P++  L PSRD+P GRW+N+TV  KD+W+ + Y  I+  R+  E  D    K G DE+G +G    RF+ N DC+ A+  Y CW NFPRC +E  E+LMTC SACEN+M AC   KD+WRCG SEY N                  + E      G+  Y RD++PGQPF    +E      P+P+CTP++  A A
Sbjct:   24 ALVFKTLARVDGCYIQGTDSGICDSDLYDDIDVREANMPFCYKYVDYIPCVPQEKTLDPSRDYPSGRWYNYTVLTKDNWIEKQYNSILKWRLYEESSDPPRVKKGYDEWGNKGTTTVRFTKNDDCQAAYAAYFCWINFPRC-DEQDESLMTCRSACENLMQACGYVKDMWRCGKSEYFNYGGSFNLDESHPEKAASQTAEEEEETGGLPIYYRDYFPGQPF--RDYEAKSDGTPIPICTPAIRDAGA 267
[Close]
BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: A0A024T935_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T935_9STRA)

HSP 1 Score: 194 bits (494), Expect = 5.730e-58
Identity = 107/252 (42.46%), Postives = 143/252 (56.75%), Query Frame = 1 
Query:    1 MTGAKDIKRLSRWLPVRRIFAAVVFTWTATVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTLLS--GVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAA 750
            MT  + +  L  W+   R  A     W+     CR+ G D G+C      ++   LQ MPFCGP + YT C+P+   L          W+NH+V  KD ++ + +++++ +R   E D  + K G DE+GA G  VPR++ N DC+DAFRNY CW NFPRC ++ G +L+ C S CEN   AC   KDLWRCG  +Y+NGYS E  T  +  GV+ Y R  +PG PF  NAF   R  D LPVCTPSL  AA
Sbjct:    6 MTATRLLLLLQLWVMSGRQVA-----WS-----CRIFGSDTGECK-----EQADFLQYMPFCGPLLPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMFKKMIAQRQIYEADLEMLKQGVDEWGALGEIVPRYTENKDCQDAFRNYMCWLNFPRC-DDAGRSLILCRSVCENFFKACMQHKDLWRCGDPQYVNGYSAEISTFANKAGVLQYYRAPFPGSPFRDNAFTADRL-DALPVCTPSLLNAA 230
[Close]
BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: A0A1V9Y7T2_9STRA (FZ domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7T2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.570e-57
Identity = 101/226 (44.69%), Postives = 133/226 (58.85%), Query Frame = 1 
Query:   67 VVFTWTATVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTLLS--GVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSL 738
            +V    + V GC++QG + G+C +     E   LQ MPFCGP ++YTAC+P    L          W+NH+V  KD ++ + Y++ + +R   E D SL  A RDE+G  G  VPRF+ N DC+DA+RNY CW NFPRC ++ G +L+ C S CEN   AC   KDLWRCG  E++NGYSPE  T  +  G + Y R  YPG PF  N F     Q  L VCTPS+
Sbjct:    6 IVIAVVSKVFGCQIQGSETGECQSP---SEF--LQYMPFCGPLLQYTACVPTAQTL----------WYNHSVKSKDLFLSQMYQKTIMQRELFELDTSLSDAKRDEWGNYGEIVPRFTENRDCQDAYRNYICWLNFPRC-DDAGVSLVMCRSVCENYFKACMQHKDLWRCGDPEFVNGYSPEISTYANNLGELQYYRYPYPGSPFRTNQFSSDGTQA-LAVCTPSI 214
[Close]
BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: A0A6A4ZBS8_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZBS8_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.460e-57
Identity = 99/222 (44.59%), Postives = 137/222 (61.71%), Query Frame = 1 
Query:  100 CRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTL--LSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAAAAL 759
            CR+ G D G+C      ++   LQ MPFCGP + YT C+P+   L          W+NH+V  KD ++ + +++IV +R   E D ++Q AG DE+G  G  VPR++ N DC+DAFRNY CW NFPRC ++ G +L+ C S CEN   AC  PKDLWRCG  +Y++GY+ E  T+  ++GV+ Y R  +PG PF  NAF   + +  L VCTPSL  AA+ L
Sbjct:   15 CRIFGSDTGECK-----EQADFLQYMPFCGPILPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMFKKIVVQRQLYEADVAMQSAGVDEWGGLGEIVPRYTENKDCQDAFRNYMCWLNFPRC-DDAGRSLVLCRSVCENFFKACMQPKDLWRCGQPQYVDGYTAEISTIANMAGVLQYYRAPFPGSPFRDNAFTADKLEA-LAVCTPSLLNAASRL 219
[Close]
BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: A0A067C8M8_SAPPC (FZ domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C8M8_SAPPC)

HSP 1 Score: 192 bits (488), Expect = 3.380e-57
Identity = 101/226 (44.69%), Postives = 131/226 (57.96%), Query Frame = 1 
Query:   79 WTATVHG---CRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTL---LSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSL 738
            W A + G   CR+ G + G+C           LQ MPFCGP ++YTAC+P+   +          W+NH+V  KD ++ + Y ++V +R   E+D  L  A RDE+G  G  VPRF+ N DC+DAFRNY CW NFPRC ++ G +L+ C S CEN   AC   KDLWRCG   Y+NGY PE  T    ++G + Y R  +PG PF  NAF     Q  LPVCTPSL
Sbjct:    7 WLAALRGLMACRIMGSNTGECQAPSVF-----LQYMPFCGPLLQYTACVPEAQTI----------WYNHSVKSKDLFLSQMYRKLVMQREYFEQDVDLNDAQRDEWGNAGEIVPRFTENRDCQDAFRNYMCWLNFPRC-DDAGVSLIMCRSVCENYFKACMQAKDLWRCGDPAYVNGYEPEISTYANNVAGELQYYRFPFPGSPFRTNAFTSDGTQA-LPVCTPSL 215
[Close]
BLAST of jgi.p|Trimin1|159754 vs. uniprot
Match: W4FF43_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF43_9STRA)

HSP 1 Score: 192 bits (488), Expect = 3.380e-57
Identity = 101/237 (42.62%), Postives = 141/237 (59.49%), Query Frame = 1 
Query:   55 IFAAVVFTWTATVH---GCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTL--LSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAA 750
            I  +++  W +T      CR+ G D G+C      ++   LQ MPFCGP + YT C+P+   L          W+NH+V  KD ++ + +++IV +R   E D ++Q AG DE+G  G  VPR++ N DC+DAFRNY CW NFPRC ++ G +L+ C S CEN   AC  PKDLWRCG  +Y++GY+ E  T   ++GV+ Y R  +PG PF  NAF   + +  L VCTPSL  AA
Sbjct:    4 IMKSMMLLWMSTAQIAWCCRIFGSDTGECK-----EQSDFLQYMPFCGPILPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMFKKIVVQRQLYEADVAMQSAGVDEWGGLGEIVPRYTENKDCQDAFRNYMCWLNFPRC-DDAGRSLVLCRSVCENFFKACMQPKDLWRCGQPQYVDGYTAEISTSANMAGVLQYYRAPFPGSPFRDNAFTADKLEA-LAVCTPSLLNAA 223
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159754 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZE42_9STRA2.110e-203100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FLG5_ECTSI6.110e-7848.75FZ domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A1V9YLP0_9STRA2.310e-6350.00FZ domain-containing protein n=1 Tax=Achlya hypogy... [more]
A0A7S3GVU4_9STRA1.220e-6046.58Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3UZ54_HETAK2.170e-6042.91Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A024T935_9STRA5.730e-5842.46FZ domain-containing protein n=1 Tax=Aphanomyces i... [more]
A0A1V9Y7T2_9STRA1.570e-5744.69FZ domain-containing protein (Fragment) n=1 Tax=Th... [more]
A0A6A4ZBS8_9STRA2.460e-5744.59FZ domain-containing protein n=1 Tax=Aphanomyces a... [more]
A0A067C8M8_SAPPC3.380e-5744.69FZ domain-containing protein n=1 Tax=Saprolegnia p... [more]
W4FF43_9STRA3.380e-5742.62FZ domain-containing protein n=1 Tax=Aphanomyces a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_10contigContig_10:988912..994850 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|159754|e_gw1.10.233.1
DescriptionFz domain
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2CB5P@1|root,2RXQZ@2759|Eukaryota
Evalue1e-78
Seed ortholog2880.D7FLG5
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionFrizzled domain
Ec32 orthologEc-17_001260.1
TranscriptId160076
TrackFilteredModels1
ProteinId159754
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159754gene_4316Tribonema minus UTEX_B_3156 geneContig_10 988912..994850 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4316_1exon_4316_1Tribonema minus UTEX_B_3156 exonContig_10 988912..989075 +
exon_4316_2exon_4316_2Tribonema minus UTEX_B_3156 exonContig_10 991531..991687 +
exon_4316_3exon_4316_3Tribonema minus UTEX_B_3156 exonContig_10 993396..993611 +
exon_4316_4exon_4316_4Tribonema minus UTEX_B_3156 exonContig_10 994563..994850 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4316CDS_4316Tribonema minus UTEX_B_3156 CDSContig_10 988912..989075 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159754Trimin1|159754|e_gw1.10.233.1Tribonema minus UTEX_B_3156 polypeptideContig_10 988912..994850 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4316 ID=mRNA_4316|Name=jgi.p|Trimin1|159754|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=825bp|location=Sequence derived from alignment at Contig_10:988912..994850+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACAGGAGCCAAGGACATTAAGCGGCTGAGTCGCTGGCTGCCAGTGCG
TCGCATTTTTGCAGCAGTGGTGTTCACATGGACAGCAACGGTGCATGGCT
GCAGGCTGCAGGGCCTGGACATTGGACAGTGCAATACCGATGTGGCAAAT
GATGAGCTGTACAGGCTGCAGCTCATGCCGTTCTGCGGCCCGTACGTGCG
CTACACGGCGTGTCTGCCCAAGCAAGCGCCGCTGCCGCCGTCGCGCGACC
ACCCGCAGGGGCGCTGGTGGAACCACACCGTCGCGCACAAGGACGACTGG
GTGCGCGAGTACTACGAGCGGATTGTTGGCGAGAGGGTCGCCATCGAAAA
GGACAAGTCGTTGCAAAAAGCGGGGCGGGATGAGTTCGGCGCGCGCGGCG
CTCCCGTGCCGCGCTTCAGCAACAACCCCGACTGCCGCGACGCGTTCCGT
AATTATGCGTGCTGGACCAACTTCCCGCGCTGCATCGAGGAGACAGGGGA
GACGCTCATGACGTGCCACAGCGCCTGCGAGAACATGATGATAGCGTGCC
GCATCCCCAAGGACCTCTGGCGCTGCGGCCCGAGCGAGTACCTCAACGGC
TACTCCCCAGAAGCCCCCACGCTCCTCAGCGGCGTCGTCACCTACCTGCG
CGACTTCTACCCCGGACAGCCCTTCGCCGCGAACGCGTTCGAGCAGACGC
GCCGTCAGGACCCGCTGCCGGTGTGCACGCCGAGCCTGGACGGCGCTGCG
GCAGCGCTCCGCGCGCCGTGGGCGGCGGCGGCACTGGCGGCGGCGCTGGC
GGCGGTCCTTGCGGCGTGCGCATAA
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protein sequence of jgi.p|Trimin1|159754

>Trimin1|159754|e_gw1.10.233.1 ID=Trimin1|159754|e_gw1.10.233.1|Name=jgi.p|Trimin1|159754|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=275bp
MTGAKDIKRLSRWLPVRRIFAAVVFTWTATVHGCRLQGLDIGQCNTDVAN
DELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDW
VREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFR
NYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNG
YSPEAPTLLSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAA
AALRAPWAAAALAAALAAVLAACA*
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mRNA from alignment at Contig_10:988912..994850+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4316 ID=mRNA_4316|Name=jgi.p|Trimin1|159754|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5939bp|location=Sequence derived from alignment at Contig_10:988912..994850+ (Tribonema minus UTEX_B_3156 )
ATGACAGGAGCCAAGGACATTAAGCGGCTGAGTCGCTGGCTGCCAGTGCG
TCGCATTTTTGCAGCAGTGGTGTTCACATGGACAGCAACGGTGCATGGCT
GCAGGCTGCAGGGCCTGGACATTGGACAGTGCAATACCGATGTGGCAAAT
GATGAGCTGTACAGGTAAGCATGTGCCGACAAACTCAAGCACTCTTGTTA
TTCAACAAAGAGCCTTAATCGTGATGGTAGCCCAAGCGCGCCTTTCAAGC
AAGCCAATTCAGCAATTCCCTATTTTGCCTCGATAAAATTGCTGAACTTC
CAGCTTGTTATGGACCCTTTGCTTGATCACAGCCCGCCGTCAAGCAACCC
ATTTTGAGATTGATCGAACTTTGCCCTAGTTGTGCTTGCCTGTGAGGACA
CACCCTCTGCACACTGCAAATAACCATTTTTCCAGTTCTCTTCTTTTTGA
AATAAGAGCACGCTGCCCAGGCGCAACACTGTGGTGTCAAAGCCTAACGT
TGTTCAAAACGTTTTCACCTAGCCATGAGTCTGACCTAACCGTAGCCCCA
AGCTTACCCTAATTTGTGCAACTAGCCATACGTCTACCCTAACCGTAGCC
CCGAGCTTACCCTTGCTTTCTGCCTCGCCTGCAAGGCATCGAGGTTGCAG
ATAGCAATGCAAGCCTCGCCGTCGGCTTTGGTACACGGAGTGCCTGCTCA
AGCACACGCTGCTGCCGAACAGCAGATCCCCAAAAGCACGTACCCATGCA
ACAGTACCATTATCGTGCCCGTTGCAGCTTTGATGTTTTACAGGAGCAGT
GCTCAGCGCGTCGCTGTGTGCGTGCCGCGTTGCACCGCCGCGTGTGTGCG
CCCAGTGTTGTCGATACAACGTCATCTTGGCACTTGTACGGTTTCAGGCG
TTGTCGACACAATGCGTCTCGGTACCTGTGCGACCCTAGTACGTACAGCT
AACATACCATTCATCTGGGCTTTTTCGCGCCTGAGCGAGACTGAAAAAAA
AGCACGTACAGGCACCAGTGTTGGCACAAGTGTCGTACAGGTATCAGTGT
CGTACAGGTACTAGTGCAGGTATCAGTGTCGTACAGGTACTAGTGTCGTA
CAGGTACAGAGATGCATACAGGTACGGAGATGCGTTGTATCGACAAAACC
TGGGCGCACACGTGGCCCCTGTCAGCAGAGGTGCAGTGCTCGCACCGCAA
TCACATCGCAGTCGTGAAAAGGAGCTTCGCAATCGCATGCAGGCACATCA
CACGTTGAACCGTGCGCCGTGCGCCGCTGCGCGCGGGGCTGCGGCGGATG
CCGTTCTGCGGCCCGCAGCTGCGGCGCGCAGTGCATCTCCAAAAACGCGC
TGCCACTCCCATACTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGT
TAGCGTTAGGGTTAGGATTAGGGTTAGGGTTAGGGTTAGCGCAGTCCCAC
CTCATCACCCTTATGACCACAGATGACATGGATTCGCAGATGTGAAAGAA
GAGGCCCCTGTGCCTGCAGGCGCAGGCTGCAGCGCATGCCACTCTGCGGC
CCGTGCGCTATACATAAACCTACCCGGAGAAAAAAGATCACAGCTCCAAG
TGCCTTACCTCAACCTTCTGGTGATGCGTCTGTATCGAGCATCTCTGCGG
TACACACCTTGTGTGTCGCGGTGACCATGAGATCTACTTGGCATCTCGTC
GTCGTTGTGCAGCAAGTCTGCGACAGCGCATGGCAGGAAACAAGCGCCGC
CCTTGCGCGGTGCCCTTGTCACAGCACATCATAACACTCAGCACTGCACG
CACGGGCACGTCACGCGTTGAACTGCGCCATGCACCCCCTCCCCAGCTGC
TGCATGCAGGCTGCAGCGCACGCCGTTCTGCACGCGCCGCTGCCGTGAAC
CATGAAGAAGAACCGCAGCTGACATGCGAGCATGTCTAGTTACTCACGTC
TGGTATACTTCTGTAGTTGGCTTCGTTGTGAAATCGACATCACATGGTTG
GTTCGTTGTGAAATCGATTCACATCACAACGAAGCCAACTATACCAACCT
CGACCCACGCAGCGCGCGCCCGCCGCGCAAAGGTTGCAGCTGCTGCCATT
CTGCGGTCCGCATGCGCGCTGCACGCCTATTTATCTATAAATGACTCATG
TGACCGTTCTGTCGGAGCACGCGCCGCTGCCGCCAATCGCAAAGAAAAAC
CCTCAAAGCACAATACACGCAGGGCACGTCACACATTGAAGTGCGTCACG
CGCCCCCGCCTGCGCTCAGGCAGTAGCTCATGCCATTCTGCGGCCCTTAC
GTGCGCCACGCGTGCCTGCCCAGGCACACGCCGCTGCTGCGACCACCCTC
ACATATGATTCAGATATGAAACGGAAGCACGTCTGGAATCACACTCATTT
ATACACTTGTAAGTCAAGCCGTGGCGCATGCCTCTGCCACACGCAGGCTT
CAGCTGATGCCTTTCTGCCCGTATGTGCGCTCCACGGCGTGTTTGCCCAA
GCAAGCGCCGCTGCCACCAGTCTTGAAGGAGAACCTCAACACTACACGCG
GAAGAAAGCAGCACTACACGCAGGGCACGTCACACGTTGAACCGCATCGC
GTGCCCCCACTGCGCGCAGGCTGCAGCTCATGCCGTTCTGCGGCCCGTAC
GTGCGCTACACGGCGTGTCTGCCCAAGCAAGCGCCGCTGCCGCCGTCGCG
CGACCACCCGCAGGGGCGCTGGTGGAACCACACCGTCGCGCACAAGGACG
ACTGGGTGCGCGAGTACTACGAGCGGGTGAGTGCGTGAGTTGAAGTTAAG
ATTCAAGTTGAAGTTAGGGTTAGGGTTGGGCGCTGGTGGAACCACACCGT
CGTGCACAAGGACGACTGGGTGCGCGCGTACTACGAGCGGGTGAGTGCGG
GAGTTGAAGTTAGGATTAGGGCAGGGGGTTAGGTTTAGGGGTAGGGTGGG
TTAGGGATCAGACCGTTAGGATTGCAGGGCACTTTGAACGTCCTCTTGAG
CTGGGGCTAGGGTTAGGATCAAGACCCAGATTAGATTAAGAGGACACTTT
GAACGTCCTCTCGAGCTGGCACCAGGGCAGGAGCAAGAGTCAGACCATTC
GGGTTCGGGGCACTTTGAACGTCCTGTTGAGCTGCTGCTCATTGCGGGCA
GTTTGCCGGTTGGGGGTTAGAGTCAGTGACAGCGATAAGCGCCACCGCTG
TGCCAGAGAACGGTCAAGCAGAGACACAACGCGCGAGAGCATGCGTTGCT
GACAAGTAGTGAATTAGGTGTTAGGCAACCCAGAGAGCTGTTGCTCACTG
CCCTGTTGTCCACACTGGCAGAGGCAGACATCAAGCTGACTAACGCAACT
GAAGACCAGCGCCAGTCGTGTGCTGGTAGAAGTGATTGTATTGTGGTCTA
CAAGTGACAAGTACTTAGGGCTAACCCTAACCCTGGTAATGAGCATGTAA
CTGCCATATGCTCCAACAGGGACGTGCCGCGAATTGTTTGAGCACTGTGG
CGCGTCAGCGCTCAGCACCTCGTCGCGCGCTTCCGGCACGTGCGTGAGTT
GCCGCGCCATGCGAGCTATCACTTAGGGTTAGCGTTGATGTTAGGGTAAG
CATCGGCGCACCGCACGTGCGGATCCTCGCCAGGAGCGTCACTGTTCAAG
AACAACACGGGGCGTTGCAGAATGCGGGGCGCGACAAATCCGGGGTGCGA
AGCATAGAAATGCGCACGGTGACGCTTCAGCAGTCTAACGCGTATCAGTG
CTCCGCACGTGCGGATCCTCGCCAGGGGCGTCACTTGTTGAAGAGCAACA
CGGGGCGTTGCAGAATGCGGGGCGCGACAAATCCGGGGCGCGAAGTATCG
AAATGCGCACGGTGATGCTCAGCAGTCTTATGCGCATCAGTGCTGCGCGC
GCAGATTGTCGGCGATAGGGTCGCGATTGAAAAAGACAAGGCGCTGCAGA
AGGCGGGCCGGGACGAGAATGAAATGAAGTATCGATCGTGCGCATGCTGA
TGCTCAGCAAATTAACCTGACGTGCAAGGGCGCCTTGCGCATGCGCAGAT
TGTTGGCGAGAGGGTCGCGATCGAGAAGGACAAGGCGCTGCAGAAGGCGC
TGCAGAAGGCGGTTTGGCTCGATATTTTGAAAGCGCATGATGATGCTCAG
CAGTTTAATGCACATCAGTACTTGGCACGTGCAGATCGTTGGCGAGAGGG
TCGCCATTGAACAGGACAAGGCGCTGCAGAGGCCGGGCGCGACTAATCCC
CTCAAATCATTGGCAAAATGCGCATGATGATGCTCAGCAGTCTAGCGTGA
CGTGCATAGGCGCCATTCGCGCGTGCAGATTGTTGGCGAGAGGGTCGCCA
TCGAGAAGGACAAGGAGGCGCTGCAGAAGGCGGGATGAGACGAATTCGGC
ACAAAGTATCAAATTGCACATGCTGATGCTCAGCAGTCTAACGCAGTCTA
ACACGACATGCGTCGACGCCATTCGAACGCGCAGATTGTTGGCGAGAGGG
TCGCCATCGAAAAGGACAAGTCGTTGCAAAAAGCGGGGCGGGATGAGTTC
GGCGCGCGCGGCGCTCCCGTGCCGCGCTTCAGCAACAACCCCGACTGCCG
CGACGCGTTCCGTAATTATGCGTGCTGGACCAACTTCCCGCGCTGCATCG
AGGAGACAGGGGAGACGCTCATGACGTGCCACAGCGCCTGCGAGAACATG
GTGAGCGCTGCTGCTCTGATATGATGGTTTCATTAATGAATACACTACTA
ACATACCACAATGCGCGCAAAAACATGGTGAGCGTTGCTTTCATGTACTT
CAAGTTTAGTTGGCATGACGTGCCACAGCACGTGCGAGAATAGGTGAGCG
CTGCTGCAGTGATGTGCTGTTCTCTTCACTTATTATTCAGTGGATTAGTG
TACTTTATATATGACGTGCTATTTTATCTGCTTTTGTGTACTTCAAGTTT
AATTTGCATGACGCGCTGCAGCGCGCCCGAGAACATGGCGAGCGTCGCTG
CTTTCGTAAAGTTCAAGTCTACTGTATGTGACGTGCCACAGCGCGCGCGA
GAACATGGTGAGTACTCGTTGTTATGCACATGCACACTGACATAGTGTAC
CCTTACACCTTGAACTGTACAGAGGTCTGCTGGTCCTTGTCTGCTCGTGA
TGTGCTATAGAGTGTGCAACCACATGGCGAACCTGATTCTTATGGAATGC
GCACGGCGCTGATCAATGATACTGTTGTGCTGCGACAGGAGCGAGTATGT
CACGCAGGTGGTGTTTCAAACGTCAACAGGCGGTAGGCTCTTTTGTTGAC
GGTATGTATGGTGTGCCAATGCGCGCCACACTCAAATCTCACATGCACGC
GCAGTCCTACCCCCAGCCCGCAATACTAACCCTGATTTCAGCCCTAATCC
CAACCGTAAAAGTCTCTCACACACACCCTCTTCCCGCCCCTAGATGATGA
CGTGCCGCACCCCCAAGGACCTAGCCCAACCCCAACCCTACCCCTGATAC
AAATCCTGATCCTAGTCCCAATTCTACGACTCAGACTCTCACACGCGGGC
GCACCCATACACTCTAACCCCTATGCCAACCCTGCTCTCAGCCCTAACCC
TACCCCTAACCCCAACTGCTGCACCCCCCTCCCGTGCGCCCCCCCCCCCA
GATGATAGCGTGCCGCATCCCCAAGGACCTCTGGCGCTGCGGCCCGAGCG
AGTACCTCAACGGCTACTCCCCAGAAGCCCCCACGCTCCTCAGCGGCGTC
GTCACCTACCTGCGCGACTTCTACCCCGGACAGCCCTTCGCCGCGAACGC
GTTCGAGCAGACGCGCCGTCAGGACCCGCTGCCGGTGTGCACGCCGAGCC
TGGACGGCGCTGCGGCAGCGCTCCGCGCGCCGTGGGCGGCGGCGGCACTG
GCGGCGGCGCTGGCGGCGGTCCTTGCGGCGTGCGCATAA
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Coding sequence (CDS) from alignment at Contig_10:988912..994850+

>mRNA_4316 ID=mRNA_4316|Name=jgi.p|Trimin1|159754|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=825bp|location=Sequence derived from alignment at Contig_10:988912..994850+ (Tribonema minus UTEX_B_3156 )
ATGACAGGAGCCAAGGACATTAAGCGGCTGAGTCGCTGGCTGCCAGTGCG
TCGCATTTTTGCAGCAGTGGTGTTCACATGGACAGCAACGGTGCATGGCT
GCAGGCTGCAGGGCCTGGACATTGGACAGTGCAATACCGATGTGGCAAAT
GATGAGCTGTACAGGCTGCAGCTCATGCCGTTCTGCGGCCCGTACGTGCG
CTACACGGCGTGTCTGCCCAAGCAAGCGCCGCTGCCGCCGTCGCGCGACC
ACCCGCAGGGGCGCTGGTGGAACCACACCGTCGCGCACAAGGACGACTGG
GTGCGCGAGTACTACGAGCGGATTGTTGGCGAGAGGGTCGCCATCGAAAA
GGACAAGTCGTTGCAAAAAGCGGGGCGGGATGAGTTCGGCGCGCGCGGCG
CTCCCGTGCCGCGCTTCAGCAACAACCCCGACTGCCGCGACGCGTTCCGT
AATTATGCGTGCTGGACCAACTTCCCGCGCTGCATCGAGGAGACAGGGGA
GACGCTCATGACGTGCCACAGCGCCTGCGAGAACATGATGATAGCGTGCC
GCATCCCCAAGGACCTCTGGCGCTGCGGCCCGAGCGAGTACCTCAACGGC
TACTCCCCAGAAGCCCCCACGCTCCTCAGCGGCGTCGTCACCTACCTGCG
CGACTTCTACCCCGGACAGCCCTTCGCCGCGAACGCGTTCGAGCAGACGC
GCCGTCAGGACCCGCTGCCGGTGTGCACGCCGAGCCTGGACGGCGCTGCG
GCAGCGCTCCGCGCGCCGTGGGCGGCGGCGGCACTGGCGGCGGCGCTGGC
GGCGGTCCTTGCGGCGTGCGCATAA
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