mRNA_4314 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|159738
Unique NamemRNA_4314
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: A0A835ZFJ6_9STRA (TauD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFJ6_9STRA)

HSP 1 Score: 503 bits (1295), Expect = 2.550e-180
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
Query:    1 MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGRRRMVGCYISRDDHESRARVCGLAVPPEVL 732
            MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGRRRMVGCYISRDDHESRARVCGLAVPPEVL
Sbjct:    1 MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGRRRMVGCYISRDDHESRARVCGLAVPPEVL 244          
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: D7FLG7_ECTSI (TauD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG7_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 4.570e-90
Identity = 140/236 (59.32%), Postives = 173/236 (73.31%), Query Frame = 1
Query:    7 MLRAYGIVLVTGSPTTMEGTEALATRIGV-VRETLYG-GMWATSAEGA--EEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGRRRMVGCYISRDDHESRARV 702
            ++R++G+ LV G PT  +GTEALA RIG  +R TLYG GMWATSAE +  EE   D+AY+N  L  HTDC Y+ DPPG+QVFNCV  A +GG S YVDGFAVA  LR  +PEAFEFF+RT   Y C D+  H +A GPVF LG  G+VVQVR+NDYDRAPLD+LP  DI+ FY++H  L+E+IR  S + ++ L PG+ VI DNHR +HGRE+F GRRRMVGCY+  D+  S ARV
Sbjct:   35 LIRSHGVALVRGVPTDEKGTEALALRIGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVADRLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLPNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECVILDNHRALHGRESFKGRRRMVGCYLGMDELHSSARV 270          
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: A0A6H5JNM9_9PHAE (TauD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM9_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 2.830e-86
Identity = 137/236 (58.05%), Postives = 172/236 (72.88%), Query Frame = 1
Query:    7 MLRAYGIVLVTGSPTTMEGTEALATRIGV-VRETLYG-GMWATSAEGA--EEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGRRRMVGCYISRDDHESRARV 702
            ++R++G+ LV G PT  +GTEALA R+G  +R TLYG GMWATSAE +  EE   D+AY+N  L  HTDC Y+ DPPG+QVFNCV  A +GG S YVDGFAVA  LR   PEAFEFF+RT   Y C D+  H +A GPVF LG  G+VVQVR+NDYDRAPLD+L   DI+ FY++H  L+++IR  S + ++ L PG+ VI +NHR +HGRE+F GRRRMVGCY+  D+ ES ARV
Sbjct:  193 LIRSHGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAREGGASIYVDGFAVAERLRATSPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGALGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSKIIRDPSLVARIVLEPGECVILNNHRALHGRESFKGRRRMVGCYLGMDELESSARV 428          
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: A0A3R7J7L5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J7L5_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.020e-75
Identity = 121/238 (50.84%), Postives = 157/238 (65.97%), Query Frame = 1
Query:    1 MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVG-RRRMVGCYISRDDHESRARVCGL 711
            MR L  YG+V VTG+P TM+ TE  +T+IG V  T+YG MW T+     E +NDTA TNL L  HTD TY++DPPGLQ+FNC+A A +GG S Y+D F V   LR+++PEAF   ++TP  YF  D+  HL    P+  +   G VVQ RHNDYDRAPL HL + +++AFYK H KL E++R        +L+ GD +I DN R MHGR AF G  R ++GCYI R ++ESR RV G+
Sbjct:  183 MRDLYTYGLVRVTGTPKTMDATEKFSTKIGFVLRTIYGTMWTTNPTNDNEDYNDTASTNLELLHHTDGTYILDPPGLQIFNCIAQAGEGGESRYIDSFHVVETLRKENPEAFRVLSQTPLPYFTVDRDAHLSTMEPLIRVDYAGNVVQFRHNDYDRAPLTHLSFEEVDAFYKAHRKLLEVMRRPEMEFCTKLQVGDMMIVDNQRVMHGRHAFNGGERALIGCYIGRTEYESRLRVLGI 420          
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: A0A8K1C7S5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7S5_PYTOL)

HSP 1 Score: 243 bits (621), Expect = 1.500e-75
Identity = 119/238 (50.00%), Postives = 158/238 (66.39%), Query Frame = 1
Query:    1 MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVG-RRRMVGCYISRDDHESRARVCGL 711
            M  L  YG+V+V  +P++M+ TE  + +IG V ET+YG MW T+ +  E+ +NDTA TN+ L  HTD TYM DPPGLQ+FNC+A A +GG S YVD F VA  LR Q+P AFEFF +TP  Y  +D+  HL    P+  L   G +VQ RHNDYDRAPL HL + + E FYK+HG+L  L+R  S   +++L+ G  +I DN R MH R+AF G  R ++GCYI R ++ESR RV  +
Sbjct:  172 MEDLYKYGLVMVHATPSSMDETEKFSRKIGFVLETIYGTMWTTNPQTEEQEYNDTASTNIELLHHTDGTYMRDPPGLQIFNCIAQAGEGGDSRYVDAFHVAERLRRQNPAAFEFFTKTPLHYHHYDRDAHLATMEPIIQLDHAGNIVQFRHNDYDRAPLTHLSFEETELFYKYHGELLSLLRDPSMEFRVKLQVGQMIIVDNQRVMHARDAFSGGERALIGCYIGRTEYESRLRVLNI 409          
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: A0A5D6XF28_9STRA (Trimethyllysine dioxygenase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF28_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.680e-75
Identity = 125/238 (52.52%), Postives = 155/238 (65.13%), Query Frame = 1
Query:    1 MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVG-RRRMVGCYISRDDHESRARVCGL 711
            M  L  YG+V+VT +P++M  TE  + RIG V  T+YG MW T+ + AE+ +NDTA TNL L  HTD TYM DPPGLQ+FNCVA A +GG S YVD F  A  LR QDP AF F A TP  Y   D   HL A  PV  L   G VVQVR+NDYDRAPL HLP+  +E FY+HH  L  ++R  S    L+LR G+ V+ DN R +HGR AF G  R ++G YI R++++SR RV G+
Sbjct:  193 MTDLYKYGLVMVTATPSSMAETERFSRRIGFVLRTIYGEMWTTNPQSAEQEYNDTASTNLELLPHTDGTYMRDPPGLQIFNCVAQAGEGGESRYVDAFHAAERLRAQDPAAFRFLAATPVNYHHFDADAHLAAMEPVIKLDHAGHVVQVRYNDYDRAPLTHLPFAAVEQFYRHHRALVRVLRDASLEATLKLRVGEMVVVDNQRVLHGRAAFDGGERSLIGSYIGRNEYDSRLRVLGI 430          
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: A0A225WPV2_9STRA (Trimethyllysine dioxygenase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPV2_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.900e-72
Identity = 119/238 (50.00%), Postives = 151/238 (63.45%), Query Frame = 1
Query:    1 MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGR-RRMVGCYISRDDHESRARVCGL 711
            MR L AYG+V V+ +P TME TE  + +IG V  T+YG MW T+    +E +NDTA TNL L  HTD TY+ DPPGLQ+FNC A A +GG S YVD F V   LR++ PEAF   + TP  YF  D   HL    P+  +   G VVQ RHNDYDRAPL HL + ++ AFY  H KL E++R        +L+ GD ++ DNHR MHGR AF G  R ++GCYI + ++ESR RV G+
Sbjct:  193 MRDLYAYGLVRVSSTPNTMEATEKFSRKIGFVMRTIYGTMWTTNPTNDDEGYNDTASTNLELLHHTDGTYIRDPPGLQIFNCAAQAGEGGESRYVDSFHVVETLRKEHPEAFRLLSTTPLPYFTVDNDAHLATMEPLIRVDYAGNVVQFRHNDYDRAPLTHLSFEEVGAFYDAHRKLLEIMRRPEMEFCTKLQVGDMLVVDNHRVMHGRHAFQGGDRALIGCYIGQTEYESRLRVLGI 430          
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: A0A2D4BN78_PYTIN (Trimethyllysine dioxygenase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN78_PYTIN)

HSP 1 Score: 233 bits (594), Expect = 2.840e-71
Identity = 112/238 (47.06%), Postives = 155/238 (65.13%), Query Frame = 1
Query:    1 MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVG-RRRMVGCYISRDDHESRARVCGL 711
            M  L  YGIV+V  +P++M+ TE  + +IG V ET+YG MW T+ +  ++ +NDTA +N+ L  HTD TY+ DPPGLQ+FNC+  A +GG S YVD + V   LR Q P AF+F ++TP  Y   D   HL    P+  L   G VVQ RHNDYDRAPL HL +  ++ FY+HH +L ++IR  +   + +L+ G+ +I DNHR MH R+AFVG  R ++GCYI R ++ESR RV  +
Sbjct:  191 MEDLHKYGIVMVHSTPSSMDETEKFSRKIGFVMETIYGKMWTTNPQTKDQQYNDTASSNIELLHHTDGTYIRDPPGLQIFNCIVQAGEGGDSRYVDAYHVVEKLRRQFPAAFDFLSKTPLHYQTFDDDAHLTTMEPIIKLDHAGNVVQFRHNDYDRAPLTHLSFDQVDEFYRHHAELLKIIRDPAMEFRHKLQVGEMIIVDNHRVMHARDAFVGGERALIGCYIGRTEYESRLRVLNI 428          
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: A0A6A3MDB6_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MDB6_9STRA)

HSP 1 Score: 234 bits (597), Expect = 4.270e-71
Identity = 119/238 (50.00%), Postives = 150/238 (63.03%), Query Frame = 1
Query:    1 MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGR-RRMVGCYISRDDHESRARVCGL 711
            MR L +YG+V V+G+P TME TE  + +IG V  T+YG MW T+     E +NDTA TNL L  HTD TY+ DPPGLQ+FNC A A +GG S YVD F VA  LR +DPEAF   + T   YF  D   HL    P+  +   G +VQ RHNDYDRAPL HL + ++  FYK H KL E++R       ++L  GD V+ DN R MHGR AF G  R ++GCYI + ++ESR RV G+
Sbjct:  247 MRDLYSYGLVRVSGTPNTMEATEKFSKKIGFVLRTIYGTMWTTNPTNEAEGYNDTASTNLELLHHTDGTYIRDPPGLQIFNCAAQAGEGGESRYVDSFHVAETLRSEDPEAFRVLSTTSLPYFTLDNDAHLATMEPLIRVDYAGNIVQFRHNDYDRAPLTHLSFEEVGEFYKAHRKLLEVMRRPEMEFCMKLDVGDMVVVDNQRVMHGRHAFQGGDRALIGCYIGQTEYESRLRVLGI 484          
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Match: H3GGD2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGD2_PHYRM)

HSP 1 Score: 231 bits (589), Expect = 1.870e-70
Identity = 118/238 (49.58%), Postives = 147/238 (61.76%), Query Frame = 1
Query:    1 MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGR-RRMVGCYISRDDHESRARVCGL 711
            MR L +YG+V V+ +P TME TE  + +IG V  T+YG MW T+     E +NDTA TNL L  HTD TYM DPPGLQ+FNC A A +GG S YVD F V   LR +DPEAF   + TP  YF  D   H     P+  +     VVQ RHNDYDRAPL HL + ++  FYK H KL E++R        +L+ GD V+ DN R MHGR AF G  R ++GCYI + ++ESR RV G+
Sbjct:  197 MRDLYSYGLVRVSNTPNTMEATEKFSKKIGFVLRTIYGTMWTTNPTNETEGYNDTASTNLELLHHTDGTYMRDPPGLQIFNCAAQAGEGGESRYVDSFHVVETLRSEDPEAFRVLSTTPLPYFTVDNDAHQATMEPLIRVDYANNVVQFRHNDYDRAPLTHLSFEEVGGFYKAHRKLLEVMRRPEMEFCTKLQVGDMVVVDNQRVMHGRHAFQGGDRALIGCYIGQTEYESRLRVLGI 434          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159738 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFJ6_9STRA2.550e-180100.00TauD domain-containing protein n=1 Tax=Tribonema m... [more]
D7FLG7_ECTSI4.570e-9059.32TauD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JNM9_9PHAE2.830e-8658.05TauD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A3R7J7L5_9STRA1.020e-7550.84Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A8K1C7S5_PYTOL1.500e-7550.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XF28_9STRA2.680e-7552.52Trimethyllysine dioxygenase n=1 Tax=Pythium brassi... [more]
A0A225WPV2_9STRA1.900e-7250.00Trimethyllysine dioxygenase n=1 Tax=Phytophthora m... [more]
A0A2D4BN78_PYTIN2.840e-7147.06Trimethyllysine dioxygenase n=2 Tax=Pythium insidi... [more]
A0A6A3MDB6_9STRA4.270e-7150.00Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
H3GGD2_PHYRM1.870e-7049.58Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_10contigContig_10:978879..983338 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|159738|e_gw1.10.25.1
BRITEko00000,ko00001,ko01000
KEGG rclassRC00773
KEGG ReactionR03451
KEGG Pathwayko00310,map00310
KEGG koko:K00474
EC1.14.11.8
Descriptiontrimethyllysine dioxygenase activity
COG categoryQ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2175@1|root,KOG3889@2759|Eukaryota
Evalue7.5e-91
Seed ortholog2880.D7FLG7
Hectar predicted targeting categoryother localisation
TranscriptId160060
TrackFilteredModels1
ProteinId159738
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159738gene_4314Tribonema minus UTEX_B_3156 geneContig_10 978879..983338 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159738Trimin1|159738|e_gw1.10.25.1Tribonema minus UTEX_B_3156 polypeptideContig_10 978879..983338 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4314_1exon_4314_1Tribonema minus UTEX_B_3156 exonContig_10 978879..978944 +
exon_4314_2exon_4314_2Tribonema minus UTEX_B_3156 exonContig_10 980504..980671 +
exon_4314_3exon_4314_3Tribonema minus UTEX_B_3156 exonContig_10 981411..981620 +
exon_4314_4exon_4314_4Tribonema minus UTEX_B_3156 exonContig_10 982613..982791 +
exon_4314_5exon_4314_5Tribonema minus UTEX_B_3156 exonContig_10 983227..983338 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4314CDS_4314Tribonema minus UTEX_B_3156 CDSContig_10 978879..978944 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4314 ID=mRNA_4314|Name=jgi.p|Trimin1|159738|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_10:978879..983338+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCATGCTGCGCGCCTACGGCATCGTGCTGGTGACGGGATCGCCGAC
CACGATGGAGGGCACGGAGGCGCTGGCGACGCGCATCGGCGTGGTGCGCG
AGACGCTGTACGGCGGCATGTGGGCCACAAGCGCGGAGGGCGCAGAGGAG
GCACACAACGACACCGCATACACGAACCTCGCACTCGGCGCGCACACCGA
CTGCACCTACATGATTGATCCGCCGGGGCTGCAGGTCTTCAACTGCGTCG
CCGCAGCGCCGAAAGGCGGCACCAGCACCTACGTCGACGGCTTCGCAGTG
GCAGCAGCGCTCAGAGAACAGGATCCCGAGGCATTTGAATTCTTTGCACG
CACGCCGTTCAAGTACTTCTGCCATGACAAATATCACCATTTGCTGGCTG
CGGGGCCGGTTTTCACGCTCGGGTGCGGGGGGCAAGTTGTGCAGGTGCGT
CACAACGACTATGATCGTGCGCCGCTCGACCACCTCCCCTACGGCGACAT
CGAGGCCTTCTACAAGCACCACGGCAAGCTCACGGAGCTGATACGCGCTG
AGTCTTCAATATTGAAGTTGAGGCTGCGGCCCGGGGACACGGTTATCGCC
GACAACCACCGGACGATGCATGGCCGCGAGGCTTTCGTCGGCCGGCGGCG
CATGGTGGGCTGCTACATATCGCGCGACGATCACGAGTCGCGCGCGCGCG
TGTGCGGCCTCGCAGTGCCGCCCGAAGTCCTCTAG
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protein sequence of jgi.p|Trimin1|159738

>Trimin1|159738|e_gw1.10.25.1 ID=Trimin1|159738|e_gw1.10.25.1|Name=jgi.p|Trimin1|159738|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp
MRMLRAYGIVLVTGSPTTMEGTEALATRIGVVRETLYGGMWATSAEGAEE
AHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAV
AAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVR
HNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIA
DNHRTMHGREAFVGRRRMVGCYISRDDHESRARVCGLAVPPEVL*
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mRNA from alignment at Contig_10:978879..983338+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4314 ID=mRNA_4314|Name=jgi.p|Trimin1|159738|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4460bp|location=Sequence derived from alignment at Contig_10:978879..983338+ (Tribonema minus UTEX_B_3156 )
ATGCGCATGCTGCGCGCCTACGGCATCGTGCTGGTGACGGGATCGCCGAC CACGATGGAGGGCACGGTACGTCACACTTGAAGTGTGTCACACTTGAAGT GCACACTTTGAAGTTTGCATGCTGCGCGCATCCGGCATCGTGCTGGTGAC GGGCTCGTCAACCACCATGGAGGGCACGGTGCATGTGCGTCACACTTTGA AGTTCACGCTTTGAAGTATACGTCATACATACTCCCCCCCGCTTATGGAT GCTTTTGCGCGCACGAACGTGGTCGTCGCCTGCCACGCTAGAGCGTGCAG TTGGCCTCAGCAGACTGTGAATGAATGTGAAATACAAGGGGAGGTGGGGG GGGGGGGGGGGGCATGTATGCATGGAGAGTGTGGTTGAAGTGGGGTGATG GGTTCGTCAATCGTGATGGAAGGCACGGTGCGCGCGGGTGCGGCTTTTGC CCTGCCTACGAGTATGCGTCATTTGCCTCGATAGTGAATTGGGCGTGGGG GAAGGGGGGGGGGGGCAGGCATGTATGGTATGCATCGGCAGTGTAGTTTG AAGAGGTGACGGGTTTGCTGGCTTTGTGGTTAGGGCTAGGGTTAGCTAAC CCTAATCCTAATAGTAAGATGGAGCGTCAAGGGCGACGCTAATTGACTGC GAAGGGGGGGCATATATGCATAGAGGATGCACTTCAAGTGAGGCGGACGG CAAAAGGCAAGTTGCAGTTGTAGTTCCATGACTGACACACTGCTACAAGT TGGTTCACTTGAAGTCTTCTTCAGGTCCTCCATGGAGATTGTGGTTTAAG TGGCGGGCGTTAAGTCCACGACGCACTGCATTAGATTGGTTCAGACACAA CATGATAGGAGGCGCTCGCAATGCGAACGGGCTGCTGCTGTAGGACCATT TTGCTCGTTTTGTTGTGTGTCACTGGCAATTGGCGCACTTTGTGACTGAA CCCTCGCCGGCGCCGCGCACGTGCACCAACTTCAACACTGCAGGAGGCGC TGGCGACGCGCATCGGCTTGGTGCGTGAGACGCTGTTCTTGCAGCTAGAA TATTGATGTTTGTGAGCTGTGAACTGCTACTTCAGGTTCAGGCAGCGTGA CCGCCACCGACCGACCTCAAACGCACTGCAGGACGTCCTCGCGCATCGGC GGGTTGCACGAGATGCTGCGCCTCACTGCTCAGCAACCATACTTGAAGTA TCACATGACCACGCAAACTTCAACTTACAGGAGGCGCTGGCGACGCGCAC CGGCTGCTGCCGCAAAAACGTCGGTTTCGTCGTCTGTCACCAGCAATTAT TGCACTTTGTGACTGATCCCTCGCTGGCGCTGTGCGCGCACCAACTTCAA CATTACAGGAAGCGCTGGCGACGCGCATCGGCGTGGTGCGCAAGACGCGC TGTACGGAGACGCAACTCAAATGTTGGAGTTTTTGTGAGCTGATCGACTT CAAGTTCAGGCAGCGTAACTGCAACCGACCTCAAACGCACTGCAGGAGGC GCTTGCGACGCGCATCGGCGTGGTGCGCGGAGACGTTCTGCCTCACTGCT CAGCAAGCCATACTTTAAGTACTTCTACCGCAATTCATCTTCTCACGCTT TGCGTGGCGCCCCAACACACTGCAGGAGGCGCTGGCGACGCGCATCGGCG TGGTGCGCGAGACGCTGTACGGCGGCATGTGGGCCACAAGCGCGGAGGGC GCAGAGGAGGCACACAACGACACCGCATACACGAACCTCGCACTCGGCGC GCACACCGACTGCACCTACATGATTGATCCGCCGGGGCTGCAGGTGCGAG GACTTCAACTTGAAGTAAAGTATTCAATCCAACATAGTGGTTGTGACTGG TGCACAACGACACCGCATACACGAGCCTCGCGCTTGGCGCGCACACGGAT TGCACCTACATGATCGATCCGCCGGGGCTGCAGGTCCGTGATACTGCAAC TTAATGTAAAAGTATTCCATCTAAAGTATACTTCTATTCGATTCACGACT CTTGCACGATGACACTGCGTACACGAATCTCGCGCTCGGCGCGCACTCCG ACTGCACCTACATGACCGATCCGCCGGGGCTGCAGGTGCGCGGTTTTGAG TCATGATGTTTGCACAACGACTCTGCCCGTTTCATCGGTCTATATCCCTG AGGCAGCCCATCGGTCAGCGTTGTGCTCAAGCGCCTTCGTCGTGCCTCCA CTCTGCACCCTATCGAACGCACTTAACCCCCCCTGCTGACTTCAATACGC TGCTGAGCACTGTGACAACGCGCGCTCGCTCATCGCCAGGTGTTGAACGG CGTGGCCGCAGCGCCCAAAGGCGGCACCACCACCCCTACGTCGATGTGTT GTACAACATACAGGAAGCCCGGAAAGGCCCTCAAGCGCCTTTATCGTGCC TCCACTCTGCACCCTATCACACGAGCCCAACCCCCCTGCTTCCACTGAGC ACCCTATTACACGCGCCCAACCCCGCTGCTGACCCCCGTACGCTGCTGAG CACTGTGACAACGCGCGCTCGCCTGCTGCCAGGTCTTCAACTGCGTCGCC GCAGCGCCGAAAGGCGGCACCAGCACCTACGTCGACGGCTTCGCAGTGGC AGCAGCGCTCAGAGAACAGGATCCCGAGGCATTTGAATTCTTTGCACGCA CGCCGTTCAAGTACTTCTGCCATGACAAATATCACCATTTGCTGGCTGCG GGGCCGGTTTTCACGCTCGGGTGCGGGGGGCAAGTTGTGCAGGTATGTGT GATAAGTACTCGTGTGTAACATACCCACACTCTGATCATTGCTGATGTAT CTGCCGCGCAGCGTATGTTTAGACAGGCTTACTGTGGCTGGGGCTCAAGT GATGTGGTAGCTGCGCCACTTCATAGACTGCTGTACATATGTAGAGCACA TCCACTGGTTTTTTGCGTGGCTTTGTGCAACAAAAGCCGCCATGCGAAGG CAAATGTACAAAATTCAAGTACATCAATGAGTACTAGCCATTCATGATGT ATACCGTACATATATAAAACTTATTTACAGGGTGTGTCGCGTGGTAGGTG CGACAAGGACCGCCATGCGAAGGGTGCACATGTTCATACATTACCTAGTG ACTGCTAGCCACACATGATGTATATTTCAGAGTGCTTTCCACGTAGTGGG CTTGGCCGCACTGCAAACAACCGCTGTTTACAAAACGCAGCATGCTGCGG GCTCACGCGCTGCTCGCTGCTGTGCGTGCGAAAGTTACCCAGCACAACTT TTGTGGAGGGGGTCTTGGTGAGGCCGTGTGCAACCCCCCCTTGCCCCCCC CCCCCCCCCTCCCCCTCCCCCCCCCAAGAAGAATTGAGACAAATATCATG CAGTGGGACCATGCGTTGCTCGCCTCCGCAGGTGCATCACAGCGACTACG GCCGCGCGCCGCTCGACCAACTCAATCACGCAGTGCATCACAGGTCGATG AAGCCTCTTCGGGGCGTTGCTGCTCACTGCGCTCGAAGACCCCTCCCCCC CCCCCCGCCCCCCGCCCCTACCCAAATACGCGAGAAAGAAATGCCAAACG CGGTGTGCGCACGTTGCTCGCTGCCGCAGGTCCGTCAAGTGAAAAAAGCC ACTGAAAACGAATCACACCAGCAAATCAAAAACCAGTGCATCACAGCTCC ATGAAGCCGCCCCGGTCGCCGCGAAGGATACCTACTGCTGCTCACGAAAG CATTGTGCTGTGTGCGTGCGCGCAATACTCGCAGGTGCGTCACAACGACT ATGATCGTGCGCCGCTCGACCACCTCCCCTACGGCGACATCGAGGCCTTC TACAAGCACCACGGCAAGCTCACGGAGCTGATACGCGCTGAGTCTTCAAT ATTGAAGTTGAGGCTGCGGCCCGGGGACACGGTTATCGCCGACAACCACC GGACGATGCATGGGTAAGTGGGTTAGGGTTAGGGTTAGGGCTAGGGTCAG GGTGAGCACTAGGGTTGTCGGTTTGAGCGTCTTGCGTTATATGCGCACAG AGAATGTGCAGCAGCCTGCAATACTGCCATGGTTCGCAGTTGCAGACAAA TGGCCGTTGATGCTGCAGATGAGCACATCTTGACCTCATGCACTTATTTG TTGATGACATACTTGCAGCGCAAGGTAGAAATGTCAGCAGATTTTATTTA TCAAAATTGCATTTTGAAAACGCAAAATGTACATAATCAAATGCGTGCCC TGCCCTCAAACTCTACATTTTGCATACTACAGTACCTCCCATACCTTTGT GCAAGAAGGAAACCACGCTTGACACTGCAACGCGCCCCTCACACACCACC CTCCCTATTGCACATTTTTTTCGTCCTGTCTCCCGCTGAGCGCTGCAGCC GCGAGGCTTTCGTCGGCCGGCGGCGCATGGTGGGCTGCTACATATCGCGC GACGATCACGAGTCGCGCGCGCGCGTGTGCGGCCTCGCAGTGCCGCCCGA AGTCCTCTAG
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Coding sequence (CDS) from alignment at Contig_10:978879..983338+

>mRNA_4314 ID=mRNA_4314|Name=jgi.p|Trimin1|159738|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=735bp|location=Sequence derived from alignment at Contig_10:978879..983338+ (Tribonema minus UTEX_B_3156 )
ATGCGCATGCTGCGCGCCTACGGCATCGTGCTGGTGACGGGATCGCCGAC
CACGATGGAGGGCACGGAGGCGCTGGCGACGCGCATCGGCGTGGTGCGCG
AGACGCTGTACGGCGGCATGTGGGCCACAAGCGCGGAGGGCGCAGAGGAG
GCACACAACGACACCGCATACACGAACCTCGCACTCGGCGCGCACACCGA
CTGCACCTACATGATTGATCCGCCGGGGCTGCAGGTCTTCAACTGCGTCG
CCGCAGCGCCGAAAGGCGGCACCAGCACCTACGTCGACGGCTTCGCAGTG
GCAGCAGCGCTCAGAGAACAGGATCCCGAGGCATTTGAATTCTTTGCACG
CACGCCGTTCAAGTACTTCTGCCATGACAAATATCACCATTTGCTGGCTG
CGGGGCCGGTTTTCACGCTCGGGTGCGGGGGGCAAGTTGTGCAGGTGCGT
CACAACGACTATGATCGTGCGCCGCTCGACCACCTCCCCTACGGCGACAT
CGAGGCCTTCTACAAGCACCACGGCAAGCTCACGGAGCTGATACGCGCTG
AGTCTTCAATATTGAAGTTGAGGCTGCGGCCCGGGGACACGGTTATCGCC
GACAACCACCGGACGATGCATGGCCGCGAGGCTTTCGTCGGCCGGCGGCG
CATGGTGGGCTGCTACATATCGCGCGACGATCACGAGTCGCGCGCGCGCG
TGTGCGGCCTCGCAGTGCCGCCCGAAGTCCTCTAG
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