mRNA_4296 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: A0A836CNB9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNB9_9STRA) HSP 1 Score: 351 bits (901), Expect = 2.000e-122 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1 Query: 1 LTYGEFDLDFLKLILDKHDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAYAREVHAALLSSCGSSSGAPLARCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPLYLRRLSRALAARLTVGAVVVTVDKRLRAEDGFELVMAYEGENRETGESTAYV 537 LTYGEFDLDFLKLILDKHDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAYAREVHAALLSSCGSSSGAPLARCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPLYLRRLSRALAARLTVGAVVVTVDKRLRAEDGFELVMAYEGENRETGESTAYV Sbjct: 1 LTYGEFDLDFLKLILDKHDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAYAREVHAALLSSCGSSSGAPLARCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPLYLRRLSRALAARLTVGAVVVTVDKRLRAEDGFELVMAYEGENRETGESTAYV 179
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: A0A7R9TQT8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TQT8_9VIRI) HSP 1 Score: 74.3 bits (181), Expect = 6.900e-13 Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 1 Query: 1 LTYGEFDLDFLKLILDKHDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAY---AREVHAALLSSCGSSSGAPLARCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPLYLRRLSRALAARLTVGAVVVTVDKRL 459 L YGE + +K +LD G RF+D+GSG+G+ +AAAL RP A C G+EILP + A A+E + AL+ S G A A +F +++++D A D+++ + T +P P + + LAARL GA V V K L Sbjct: 67 LFYGEAPVTAIKGVLDAVGARAGERFLDLGSGSGKAVIAAALARPDLAACQGIEILPSLHAESVAAKERYDALVMSDGPRGAA--AAVDFTLGNLFAADLSSA--------DVVYCFFTCFP------PALIIDVETELAARLRPGARVAVVSKSL 206
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: A0A6S8C1Y0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8C1Y0_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 5.640e-9 Identity = 59/193 (30.57%), Postives = 84/193 (43.52%), Query Frame = 1 Query: 1 LTYGEFDLDFLKLILDKHDPG---PGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEM--TAYAREVHAALLSSCGSSSGAPLARCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPL--------YLRRLSRALAARLTVGAVVVTVDKRLRAEDGFELVMAYEG-ENRETGESTAYV 537 LTYGEF+++ L+ L G +D+GSGTGR + AALL P W+ C G+EI P + A AR + A G G C V DM +L F Y+TA+P+ + L + R + R ++ + T D+ L GF+LV +NRET S Y+ Sbjct: 71 LTYGEFEIESLEECLSAATHGLKENNVDLLDIGSGTGRLVMCAALLFPEWSCCRGVEISPALYADADARRIRAENQGLLGP--GHVHFACANVLTDM---------KLEFPHTNLFFIYATAFPAPRFNEQLRAPILNDEWTRAIRRIVSTSKCKHIRIATTDRALDPHAGFDLVNVLPNVKNRETFGSALYI 252
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: A0A812VUJ9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812VUJ9_9DINO) HSP 1 Score: 60.5 bits (145), Expect = 1.870e-7 Identity = 65/185 (35.14%), Postives = 85/185 (45.95%), Query Frame = 1 Query: 1 LTYGEFDL-DFLKLILDKHDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAYAREVHAALLSSCGSSSGAPLARCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPLYLRRLSRALAARLTVGAVVVTVDKRL-RAEDGFELVMAYEGENR-----ETGESTAY 534 LTY E + F L+ P PG F+D+GSGTGR LAAAL PS C G E+L + A A A S GS + LA + M S G D A D D++ W + + P L + RA A RL GA ++T+D A GFE ++ +G R GE+T Y Sbjct: 830 LTYAEVEFAPFCALLQRVAQPQPGETFLDLGSGTGRALLAAALGFPSLRCCRGYELLEPLHAAAERAAA----SAGSLASGQLAPVDL---RMQSFLGSDVAWEEE-DVDIV------WVASLCLRPETLAEV-RARATRLRPGARILTMDPHFAEAAPGFEQILV-DGATRIPVEMSFGEATVY 998
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: A0A7S2S8U2_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8U2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 5.490e-7 Identity = 50/159 (31.45%), Postives = 73/159 (45.91%), Query Frame = 1 Query: 1 LTYGEFDLDFLKLILDKHDPGPGTRFMDVGSGTGRCTLAAALLRPS-WALCTGLEILPEMTAYAREVHAALLSSCGSSS---GAPLARCEFVT--ADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPLYLRRLSRALAARLTVGAVVVTVDKRL 459 LTYGE D IL++ P PG F+D+G GTGR L+AALL ++ C G+E+L + A + H + GA RC D+ + D DL+FA ST + + L R A A R+ G+ ++T+ K+L Sbjct: 302 LTYGEVDFFSFATILEQAQPRPGQIFVDLGHGTGRAVLSAALLYGHVFSACWGIEVLAPLAAASFSAHDRYSQAVRRREWLYGALSQRCAVRVQHGDILEPQSPEETGFEWTDADLVFANSTCFTDE-------LMRGIAARAERMASGSKIITLTKQL 453
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: A0A7S3B7Q8_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3B7Q8_9VIRI) HSP 1 Score: 57.8 bits (138), Expect = 8.130e-7 Identity = 46/162 (28.40%), Postives = 74/162 (45.68%), Query Frame = 1 Query: 1 LTYGEFDLDFLKLILDKHDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAYAREVHAAL---------LSSCGSSSGAPLARCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPLYLRRLSRALAARLTVGAVVVTVDKRL 459 L YGE L+ + +LD G F+D+GSG+G+ +AAAL+RP A G+EILPE+ A + L CG+ + AD+ ++D +++ +ST +P + D + A+AA++ G V V K+L Sbjct: 113 LFYGEASLEAVARVLDAAHAREGDTFLDLGSGSGKAVIAAALVRPDLASVRGIEILPELHTEALAAQQRMPPDRAWPRVLFECGN----------LLEADLRAAD-------------VVYFFSTCFPRALCDE------VELAVAAQMKAGGRFVCVSKQL 245
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: S9P4K3_9DELT (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=3 Tax=Cystobacter TaxID=42 RepID=S9P4K3_9DELT) HSP 1 Score: 56.2 bits (134), Expect = 1.770e-6 Identity = 43/122 (35.25%), Postives = 60/122 (49.18%), Query Frame = 1 Query: 4 TYGEFDLDFLKLILDKHDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAYAREVHAALLSSCGSSSGAPLA--RCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSD 363 TYGE +L++ PGPG F D+GSGTG+ TL AAL P ++ G+E+ P + AR+V A + A A R EF+ D D A D+LFA+ T +P + Sbjct: 38 TYGEVVPLAFHDVLNEAAPGPGEVFFDLGSGTGKATLLAALTFP-FSRVVGIELFPGLGDAARKVLARYEAEVRPQLPAEYAQQRIEFIDGDFLEQDLSSA--------DVLFAHGTCYPQE 150
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: A0A813A5Y3_9DINO (ANK1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A5Y3_9DINO) HSP 1 Score: 57.0 bits (136), Expect = 2.930e-6 Identity = 56/165 (33.94%), Postives = 77/165 (46.67%), Query Frame = 1 Query: 1 LTYGEFDLDFLKLILDK-HDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAYAREVHAALLSSCGSSSGAPLARCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPLYLRRLSRALAARLTVGAVVVTVDKRL-RAEDGFELVM 489 LTY E + + +L + P PG F+D+GSGTGR L AAL PS C G E+L + A A A S GS + LA + M S G DA D D++ W + + P L + RA A RL GA ++T+D + GFE ++ Sbjct: 943 LTYAEVEFAPFRALLQRVAQPQPGETFLDLGSGTGRAVLVAALGFPSLRCCRGYELLEPLHAAAERAAA----SAGSLASGQLAPVDL---RMQSFLGPDAVWEEE-DVDIV------WVASLCLRPETLAEV-RARATRLRPGARILTMDPHFAESSPGFETIV 1092
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: A0A1Q9EUD7_SYMMI (Ankyrin-1 n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EUD7_SYMMI) HSP 1 Score: 57.0 bits (136), Expect = 3.010e-6 Identity = 56/165 (33.94%), Postives = 77/165 (46.67%), Query Frame = 1 Query: 1 LTYGEFDLDFLKLILDK-HDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAYAREVHAALLSSCGSSSGAPLARCEFVTADMYSSDGGDAASATAADYDLLFAYSTAWPSDVGDSPLYLRRLSRALAARLTVGAVVVTVDKRL-RAEDGFELVM 489 LTY E + + +L + P PG F+D+GSGTGR L AAL PS C G E+L + A A A S GS + LA + M S G DA D D++ W + + P L + RA A RL GA ++T+D + GFE ++ Sbjct: 1279 LTYAEVEFAPFRALLQRVAQPQPGETFLDLGSGTGRAVLVAALGFPSLRCCRGYELLEPLHAAAERAAA----SAGSLASGQLAPVDL---RMQSFLGPDAVWEEE-DVDIV------WVASLCLRPETLAEV-RARATRLRPGARILTMDPHFAESSPGFETIV 1428
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Match: UPI0013E294E3 (class I SAM-dependent methyltransferase n=1 Tax=Actinoplanes sp. LAM7112 TaxID=2486853 RepID=UPI0013E294E3) HSP 1 Score: 53.1 bits (126), Expect = 1.690e-5 Identity = 29/78 (37.18%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 34 KLILDKHDPG--PGTRFMDVGSGTGRCTLAAALLRPSWALCTGLEILPEMTAYAREVHAALLSSCGSSSGAPLARCEF 261 +++ D H+ G GTR +DVG+G GR A AL PSW + G+++ P+M AYAR+ +A+ + G + P F Sbjct: 24 RVVADAHEAGLPAGTRVLDVGTGPGRVPRALALAEPSW-IVEGVDLSPQMIAYARQRSSAVSYAVGDVAALPYPDASF 100 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|148501 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4296 ID=mRNA_4296|Name=jgi.p|Trimin1|148501|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=537bp|location=Sequence derived from alignment at Contig_10:647217..647834+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTCACGTACGGCGAATTCGACCTCGACTTCTTGAAGTTGATCCTCGATAAback to top protein sequence of jgi.p|Trimin1|148501 >Trimin1|148501|gw1.10.206.1 ID=Trimin1|148501|gw1.10.206.1|Name=jgi.p|Trimin1|148501|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=179bp LTYGEFDLDFLKLILDKHDPGPGTRFMDVGSGTGRCTLAAALLRPSWALCback to top mRNA from alignment at Contig_10:647217..647834+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4296 ID=mRNA_4296|Name=jgi.p|Trimin1|148501|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=618bp|location=Sequence derived from alignment at Contig_10:647217..647834+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_10:647217..647834+ >mRNA_4296 ID=mRNA_4296|Name=jgi.p|Trimin1|148501|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=537bp|location=Sequence derived from alignment at Contig_10:647217..647834+ (Tribonema minus UTEX_B_3156 )back to top |