mRNA_4268 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: A0A835ZFG7_9STRA (Protein MAK16 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG7_9STRA) HSP 1 Score: 548 bits (1413), Expect = 1.980e-195 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 1
Query: 1 MQCDEVIWSVINHQFCAFKAKIAKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAEEEFSGEEEXXXXXXXXXXXXXXVEYVEGDEEEESDMEDGAWGSSYWGAEGGSDAGSDGETVDASDEEXXXXXXXXXXXXXXXXXXXXXXXKRVKGAAGAKKAVGGQGKKRPGPYVEVEYEEEMEGGATESSMSFNW 990
MQCDEVIWSVINHQFCAFKAKIAKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAEEEFSGEEEXXXXXXXXXXXXXXVEYVEGDEEEESDMEDGAWGSSYWGAEGGSDAGSDGETVDASDEEXXXXXXXXXXXXXXXXXXXXXXXKRVKGAAGAKKAVGGQGKKRPGPYVEVEYEEEMEGGATESSMSFNW
Sbjct: 1 MQCDEVIWSVINHQFCAFKAKIAKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAEEEFSGEEEXXXXXXXXXXXXXXVEYVEGDEEEESDMEDGAWGSSYWGAEGGSDAGSDGETVDASDEEXXXXXXXXXXXXXXXXXXXXXXXKRVKGAAGAKKAVGGQGKKRPGPYVEVEYEEEMEGGATESSMSFNW 330
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: D8LE67_ECTSI (Protein MAK16 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE67_ECTSI) HSP 1 Score: 310 bits (793), Expect = 5.630e-101 Identity = 169/245 (68.98%), Postives = 196/245 (80.00%), Query Frame = 1
Query: 1 MQCDEVIWSVINHQFCAFKAKIAKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAEEEFSGEEEXXXXXXXXXXXXXXVEYVEGDEEEESDMEDGA-WGSSYWGAEG 732
MQ D+VIW V+N+QFC+FK+KIAKEQTFCRN YN TGLCN+ SCPLANSRYATI+EHDGVCYLY+K+IERAH+PKNLWEKIKL RNY +ALE VS +L++FPK+LQH++KQRLTKIHQYLIRMRKLKLKA+PKLV IN KVE+RE AA L+RSIE ELLERLK+GTYGDIYNFPEVQY KAL +AE+E++ E+ XXXXXXX D+ED A WG SYWGA G
Sbjct: 1 MQSDDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALMEAEDEYA-EQNPEAMEEEXXXXXXXXXXXXXXXXXXXDIEDTAEWGGSYWGAPG 244
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: A0A067C7V2_SAPPC (Protein MAK16 homolog n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C7V2_SAPPC) HSP 1 Score: 278 bits (711), Expect = 2.690e-89 Identity = 150/234 (64.10%), Postives = 180/234 (76.92%), Query Frame = 1
Query: 1 MQCDEVIWSVINHQFCAFKAKIAKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAEEEFS-GEEEXXXXXXXXXXXXXXVEYVEG-DEEEESDMED 696
MQ DEVIW VI++QFC+FK+K+ + FCRN YN TGLCNR SCPLANSRYATI+EH+GVCYLYMK+IERAHSPKNLWEK+KL +NYT++LE + Q+Q++PK L H+NKQRLTKIHQYL+RMRKL+LK +P LV INKK+ERREA+ + AA LD SIE ELL+RL++GTYGDIYNFPE ++ K L EEE GE+E XXX VEYVE E DMED
Sbjct: 1 MQHDEVIWGVISNQFCSFKSKLREGAMFCRNEYNVTGLCNRQSCPLANSRYATIREHNGVCYLYMKTIERAHSPKNLWEKVKLSKNYTKSLEQIDAQMQFWPKKLIHRNKQRLTKIHQYLMRMRKLRLKTKPNLVVINKKIERREARREEKAKTAAKLDSSIEKELLQRLQKGTYGDIYNFPEREFAKVLDDNEEEXXXGEDEYEMESDXXXGQ---VEYVEDFXXXSEDDMED 231
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: A0A3F2RF83_9STRA (Protein MAK16 homolog n=6 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RF83_9STRA) HSP 1 Score: 272 bits (696), Expect = 8.590e-87 Identity = 159/243 (65.43%), Postives = 188/243 (77.37%), Query Frame = 1
Query: 1 MQCDEVIWSVINHQFCAFKAKI-AKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAEEEFSGEEEXXXXXXXXXXXXXX----------VEYVEGDEEEESDMED 696
MQ DEVIW VI+ QFC+FK+K+ FC NPYN TGLCNR +CPLANSRYATI+EHDGVCYLYMK+IERAH+P LWE++KL +NYT++L + EQLQ++PK L HKNKQRLTKIHQYL+RMRKL LK +PKLV INKK+ERRE + AA LD SIE ELLERL++GTYGDIYNFPE ++ K L+ + + EEEXXXXXXXXXXXXXX VEYVE EE+ESD+ED
Sbjct: 1 MQHDEVIWGVISKQFCSFKSKLPGTGNMFCSNPYNVTGLCNRSACPLANSRYATIREHDGVCYLYMKTIERAHTPNRLWERVKLSKNYTKSLAQIDEQLQFWPKKLIHKNKQRLTKIHQYLMRMRKLTLKTKPKLVVINKKIERREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPESEFSKVLESNGKRQTMEEEXXXXXXXXXXXXXXXXXXXXDAGQVEYVEDFEEDESDLED 243
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: A0A1V9YTR0_9STRA (Protein MAK16 homolog n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTR0_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.420e-86 Identity = 131/194 (67.53%), Postives = 161/194 (82.99%), Query Frame = 1
Query: 1 MQCDEVIWSVINHQFCAFKAKIAKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAE 582
MQ DEVIW VI++QFC+FK+K+ + FCRN YN TGLCNR SCPLANSRYATI+EH+GVCYLYMK+IERAHSPKNLWEK+KL +NYT++L + EQ+Q++PK + H+NKQRLTKIHQYL+RMRKL+LK +P LV INKK+ERREA+ + AA LD SIE ELL RL++GTYGDIYNFPE ++ K L + E
Sbjct: 1 MQHDEVIWGVISNQFCSFKSKLREGAMFCRNEYNVTGLCNRQSCPLANSRYATIREHNGVCYLYMKTIERAHSPKNLWEKVKLSKNYTKSLAQIDEQMQFWPKKMIHRNKQRLTKIHQYLMRMRKLRLKTKPNLVVINKKIERREARREEKAKTAAKLDSSIEKELLARLQKGTYGDIYNFPEKEFVKVLDENE 194
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: A0A024GAA3_9STRA (Protein MAK16 homolog n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GAA3_9STRA) HSP 1 Score: 267 bits (683), Expect = 5.730e-85 Identity = 160/324 (49.38%), Postives = 205/324 (63.27%), Query Frame = 1
Query: 1 MQCDEVIWSVINHQFCAFKAKI-AKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYG-----KALQQAEEEFSGEEEXXXXXXXXXXXXXXVEYVEGDEEEESDMEDGAWGSSYWGAEGGSDAGSDGETVDASDEEXXXXXXXXXXXXXXXXXXXXXXXKRVKGAAGAKKAVGGQGKKRPGPYVEVEYEEEME 954
MQ DEVIW VI+ QFC+FK+++ A + FCRN YN +GLCNRG+CPLANSRYAT++EH+G+CYLYMK+IERAHSPK+LWE+IKL RNY+++LE + +QLQ++PK + HK KQR TKIHQYL+RMRKL+ + +PKLV INKK+ERRE + + AA +D +IE ELLERL++GTYGDIYNFPE ++ K + Q EEE EEE EYVE MED E G+ + SD T D E +R + GA K V + +K PGPYVE+EYE+E E
Sbjct: 1 MQHDEVIWGVISGQFCSFKSRLPATKALFCRNEYNVSGLCNRGACPLANSRYATVREHEGICYLYMKTIERAHSPKHLWERIKLSRNYSRSLEQIDQQLQFWPKKMIHKVKQRQTKIHQYLLRMRKLQSQIKPKLVVINKKIERREIRRERKAQTAAKIDTAIEKELLERLEKGTYGDIYNFPEKEFSSIINQKGIAQTEEENQVEEEVEYSSEEDAV----TEYVEDFXXXXXXMED---------FESGAISASDQSTSSDDDNEGNDAHV-----------------RRKRSLNGASK-VNKKLRKAPGPYVEIEYEQENE 293
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: A0A4D9D3B1_9STRA (Protein MAK16 homolog n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3B1_9STRA) HSP 1 Score: 268 bits (684), Expect = 9.530e-85 Identity = 133/191 (69.63%), Postives = 158/191 (82.72%), Query Frame = 1
Query: 10 DEVIWSVINHQFCAFKAKI-AKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKA-RPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQ 576
DE+IW +INHQFC+FK+K+ AKE TFCRNPYN TGLC R +CPLANSRYATI+E +G CYL +K+ ERAH+P LWEKI+LP NY +ALE VSE+L+YFPKYLQH+NKQRLTKIHQYLIRMRKLKLKA +PKLV I+KKV+RRE K AA L+++IE ELL RL++GTYGDIYNFPE Y K L +
Sbjct: 5 DEIIWQIINHQFCSFKSKLNAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEELEYFPKYLQHRNKQRLTKIHQYLIRMRKLKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDE 195
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: A0A484EAC2_BRELC (Protein MAK16 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAC2_BRELC) HSP 1 Score: 265 bits (678), Expect = 3.950e-84 Identity = 181/342 (52.92%), Postives = 218/342 (63.74%), Query Frame = 1
Query: 1 MQCDEVIWSVINHQFCAFKAKI-AKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKAL------QQAEEEFSGEEEXXXXXXXXXXXXXXV----EYVEGDEEEESDMEDGAWGSSYWGAEGGSDAGSDGETVDASDEEXXXXXXXXXXXXXXXXXXXXXXXKRVKGAAGAKKAVGGQGKKRP-GPYVEVEYEEEMEGGATESSMSFNW 990
MQ DEVIW VI+ QFC+FK+K+ FC NPYN TGLC+R +CPLANSRYATI+E DGVCYLYMK+IERAH+P LWE++KL RNYT++L + EQLQ++PK L +KNKQRLTKIHQYL+RMRKL LK +PKLV INKK++RRE + AA LD SIE ELLERL++GTYGDIYNFPE ++ K L Q EEE GEEE XXXXXXXXXXXV EYVE SD+ED A + +++GS E VD K+ + A KK Q KRP GPYVE+EYE+E E ++ NW
Sbjct: 1 MQHDEVIWGVISKQFCSFKSKLPGTGAMFCSNPYNVTGLCHRSACPLANSRYATIREEDGVCYLYMKTIERAHTPNRLWERVKLSRNYTKSLAQIDEQLQFWPKKLIYKNKQRLTKIHQYLMRMRKLTLKTKPKLVVINKKIDRREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPEREFSKVLADKGKRQTMEEESEGEEEIEYXXXXXXXXXXXVSGQVEYVEDFXXXXSDLEDFADNFAVDDEGDSNESGS--EDVDVP------------------------HVKKRQAPALPKKPSKKQ--KRPKGPYVEIEYEQEQE-----TTNGLNW 309
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: W7TVF8_9STRA (Protein MAK16 homolog n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVF8_9STRA) HSP 1 Score: 266 bits (679), Expect = 4.630e-84 Identity = 133/191 (69.63%), Postives = 157/191 (82.20%), Query Frame = 1
Query: 10 DEVIWSVINHQFCAFKAKI-AKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKA-RPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQ 576
DE+IW +INHQFC+FK+KI AKE TFCRNPYN TGLC R +CPLANSRYATI+E +G CYL +K+ ERAH+P LWEKI+LP NY +ALE VSE L+YFPKYLQH+NKQRLTKIHQYLIRMR+LKLKA +PKLV I+KKV+RRE K AA L+++IE ELL RL++GTYGDIYNFPE Y K L +
Sbjct: 5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDE 195
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: A0A6G0WCX5_9STRA (Protein MAK16 homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCX5_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.100e-83 Identity = 131/194 (67.53%), Postives = 162/194 (83.51%), Query Frame = 1
Query: 1 MQCDEVIWSVINHQFCAFKAKIAKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAE 582
MQ DEVIW VIN+QFC+FK+K+ + FCRN YN TGLCNR SCPLANSRYATI+EH+GVCYLYMK+IERAHSPKNLWEKIKL +NYT++L + E +Q++PK + H+NKQRLTKIHQYL+RMRKL++K +P LV ++KK+ERREA+XXXXX + SIE ELLERL++GTYGDIYNFPE ++ K L + E
Sbjct: 1 MQHDEVIWGVINNQFCSFKSKLREGSAFCRNEYNVTGLCNRQSCPLANSRYATIREHEGVCYLYMKTIERAHSPKNLWEKIKLSKNYTKSLGQIDEHMQFWPKKMIHRNKQRLTKIHQYLMRMRKLRVKTKPNLVVVSKKIERREARXXXXXXXXXXXESSIEKELLERLQKGTYGDIYNFPEREFTKLLDEHE 194
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Match: A0A835YL75_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL75_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.600e-22 Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 1
Query: 1 MSGLGQRTGVAWLAADARTPVGATAASGHWYMGIYGLACCAAVT 132
MSGLGQRTGVAWLAADARTPVGATAASGHWYMGIYGLACCAAVT
Sbjct: 1 MSGLGQRTGVAWLAADARTPVGATAASGHWYMGIYGLACCAAVT 44 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347295 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|347295 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4268 ID=mRNA_4268|Name=jgi.p|Trimin1|347295|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=993bp|location=Sequence derived from alignment at Contig_10:424052..427115- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGTGCGATGAGGTAATATGGAGCGTCATCAACCACCAGTTTTGCGCback to top protein sequence of jgi.p|Trimin1|347295 >Trimin1|347295|estExt_Genemark1.C_Ctg_100054 ID=Trimin1|347295|estExt_Genemark1.C_Ctg_100054|Name=jgi.p|Trimin1|347295|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=331bp MQCDEVIWSVINHQFCAFKAKIAKEQTFCRNPYNATGLCNRGSCPLANSRback to top mRNA from alignment at Contig_10:424052..427115- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4268 ID=mRNA_4268|Name=jgi.p|Trimin1|347295|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3064bp|location=Sequence derived from alignment at Contig_10:424052..427115- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_10:424052..427115- >mRNA_4268 ID=mRNA_4268|Name=jgi.p|Trimin1|347295|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=993bp|location=Sequence derived from alignment at Contig_10:424052..427115- (Tribonema minus UTEX_B_3156 )back to top |