mRNA_4212 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: A0A835ZF81_9STRA (Snurportin-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF81_9STRA) HSP 1 Score: 845 bits (2184), Expect = 7.460e-310 Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 1
Query: 1 MTSVEQPGSSAPRASAKSASLRRGDQQRRRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLESMEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGPGCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPDPFTGENSLLYPLATADDPPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGSLVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRTGRGVISIGDIAAVVAAGGEGMATDGKEG 1263
MTSVEQPGSSAPRASAKSASLRRGDQQRRRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLESMEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGPGCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPDPFTGENSLLYPLATADDPPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGSLVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRTGRGVISIGDIAAVVAAGGEGMATDGKEG
Sbjct: 1 MTSVEQPGSSAPRASAKSASLRRGDQQRRRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLESMEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGPGCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPDPFTGENSLLYPLATADDPPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGSLVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRTGRGVISIGDIAAVVAAGGEGMATDGKEG 421
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: A0A6A3SJ83_9STRA (Snurportin-1 n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SJ83_9STRA) HSP 1 Score: 285 bits (728), Expect = 2.740e-89 Identity = 157/374 (41.98%), Postives = 220/374 (58.82%), Query Frame = 1
Query: 85 RRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLESMEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGP-GCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPD---PFTGENSLLYP----LATADDPPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGSLVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRTG 1182
RRQ+ L Q++ARR LT HAR LA + PS M+ + Q ++++RE+++ +RR+++++Q PEW++DVP+DLNG+GS GEGW+V+PRPEGKR +++A G T+AR +G I + S L G + K G +LDCVF E D TFYV+D+MCW Y LY+CT+EFR YW+R KL+E V+ N +R P+PCY+ P G+ AAY P+++DGLLF KAGHY +G +PL L+WKD T+R+ G A P G+N L TAD+ + QH L EGDL F E+ D + P + G+ F KRCSP R + DSW+K +FQ R+G
Sbjct: 19 RRQETLALQRQARRDLTAHARQLAQQQEPPS-------------PSPMDESAQTQPKRKTREDRVKQRREHFAKQLMTPEWLIDVPKDLNGSGSALGEGWYVLPRPEGKRCLVVANGGSTVARIPSGGILKKFPSALPCGSHKTNKSSDGYCILDCVFQEQDATFYVLDVMCWKGYLLYNCTTEFRLYWMRDKLSEGATATVTPANPFRFLPIPCYESDPAGIMAAYSTTYPFLKDGLLFYMKAGHYEMGLSPLALVWKDAKTSRFYGYSAKPSIVLRLEGDNEFATLEGIFLFTADED-FIQQHE---------LTEGDLASFAFEEHEM----DENQTPHLTGMTFVKRCSPQRALPDSWTKILFQYNARSG 365
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: A0A6G0W5E4_9STRA (Snurportin-1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5E4_9STRA) HSP 1 Score: 283 bits (725), Expect = 8.480e-89 Identity = 164/368 (44.57%), Postives = 223/368 (60.60%), Query Frame = 1
Query: 76 QQRRRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLES-MEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGP-GCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPDPFTGENSLLYPLATADDPPVVLQHSTEYSAALGHLKE------GDLLRFFVSSAELAVESDGSLVPV-VQGLVFDKRCSPVRPMADSWSK 1152
Q+RRR+D + +QK+ARR LT RNLA + E D N+E+ ME++ + +RK +RE+++ RRD++S QF PEW++DVP DLN G EG GWFV+PRP+GKR ++I++ G TIART +G++ + S L G + G G VLDC+FHE D TFYV+D+MCW Y LYDCT+EFR YW+ KL+E V VS N R P+P Y+C QGL AAY P+++DGLLF CKAG Y+LG +PLVLLW+D+ T++Y EN L L DD V + E+ LK GDL+R V S + ++ + + V G+ F KRCSP R +ADSW+K
Sbjct: 19 QERRRRDAIDRQKQARRDLTMQVRNLALPSVENELED------LSMNMETDMEISKSKSRRK-TREDRVKARRDHFSAQFMHPEWMVDVPSDLNEKG--EGLGWFVLPRPDGKRCLVISSNGSTIARTTSGSVLKKFPSALPCGSRKTNAGQDGYCVLDCIFHEEDSTFYVLDVMCWKGYLLYDCTAEFRFYWLHEKLSETTVNTVSSANPCRFDPIPHYECDAQGLQAAYNMDFPFVKDGLLFYCKAGLYTLGLSPLVLLWRDQHTSQY------------ENQLSIVLRVQDDMSCVSLENIEFFTVSDDLKNTEEIAPGDLVRCQVESIKWSIPEEAEEADIEVTGVTFQKRCSPQRGLADSWTK 365
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: W2PNQ8_PHYPN (Snurportin-1 n=10 Tax=Phytophthora TaxID=4783 RepID=W2PNQ8_PHYPN) HSP 1 Score: 281 bits (718), Expect = 1.040e-87 Identity = 158/374 (42.25%), Postives = 224/374 (59.89%), Query Frame = 1
Query: 85 RRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLESMEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKG-PGCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPD---PFTGENSLL----YPLATADDPPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGSLVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRTG 1182
RR++ L +Q++ARR LT HAR LA + PS HGG E+ + M+ ++R+REE++ +RR+++S+Q PEW++D+P+DLNG GS GEGW+V+PRPEGKR +++A G TIAR +G+I + S L G + K G +LDC+F E ++TFYV+D+MCW Y LY+CT+EFR YW+R KL+E + N +R PVP Y+ +G+ AAY P+++DGLLF KAGHY +G +PL L+WKD T+R+ A P F G+N + L TA+ + +H L EGDL F E+ D S P + GL F KRCSP R + DSW+K +FQ R+G
Sbjct: 19 RRRETLAQQRQARRDLTAHARQLAQQQEPPS---PHGG----EDAQPMDGVISATSKRRTREERVKQRREHFSKQLMTPEWLIDIPKDLNGNGSLLGEGWYVLPRPEGKRCLVVANGGNTIARIPSGSILKKFPSALPCGSHKTNKSNDGYCILDCIFQEQNETFYVLDVMCWKGYLLYNCTTEFRLYWMRDKLSEGATGMTAPANPFRFLPVPSYESDQEGIMAAYSTTYPFLKDGLLFYMKAGHYEMGLSPLALVWKDANTSRFFVYSAKPSIVLRFEGDNEFVTLEGIALFTANQD-FIQEHE---------LNEGDLASFSFEQTEV----DESQTPHLTGLTFVKRCSPQRALPDSWTKILFQYNARSG 371
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: A0A0P1AJ51_PLAHL (Snurportin-1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ51_PLAHL) HSP 1 Score: 279 bits (714), Expect = 3.910e-87 Identity = 156/372 (41.94%), Postives = 220/372 (59.14%), Query Frame = 1
Query: 85 RRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLESMEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGP-GCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPDPFTGENSLLYPLATADDPPVVLQHSTEYSAALGH-----LKEGDLLRFFVSSAELAVESDGSLVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRTG 1182
RRQ L +Q++ARR LT HAR LA D ++ D+ DE E M+ +R R+RE+++ +RR+Y+S+Q PEW+LDVP+DLNG GS GEGW+V+PRPEGKR +++A G TIAR +G I + + S L G + K G +LDC++ E ++TFYV+D+MCW Y LY+CTSEFR YW+R KL+E VS N +R P+PCY+C G+ AAY P+ +DGLLF KAGHY +G +PL L+WKD T+R+ F+ + ++ + L+ ++A + L EGDL F E D P + G+ F KRCSP+R + DSW+K +FQ R+G
Sbjct: 18 RRQTTLVQQRKARRDLTAHARRLAQHEDSLANHDR------DEGTEPMDDIASVSKR-RTREDRVKQRREYYSKQLMTPEWLLDVPKDLNGMGSALGEGWYVLPRPEGKRCLVVANGGNTIARIPSGNILNKFPSALPCGSYKTNKSSDGYCILDCIYQEQNETFYVLDIMCWKGYLLYNCTSEFRLYWMRDKLSEGLTATVSSANPFRFLPIPCYECDQAGIMAAYSTMYPFHKDGLLFYMKAGHYEMGLSPLALVWKDSMTSRF---------FSSTKPSIVLRLEQNNEFLTLEGIALFAADQQYIHQFELSEGDLASFSYDQ----YEDDDKQPPHLTGMTFVKRCSPLRALPDSWTKILFQLKTRSG 369
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: K3W9X0_GLOUD (Snurportin-1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9X0_GLOUD) HSP 1 Score: 277 bits (708), Expect = 7.360e-86 Identity = 162/394 (41.12%), Postives = 223/394 (56.60%), Query Frame = 1
Query: 85 RRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQH--------------GGKIADENLE-SMEVANG---QQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGP-GCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPD---------PFTGENSLLYPLATADDPPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGSLVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRTG 1182
RRQ L +Q++ARR L HAR L T D+ S G++ D+ +E S ANG Q ++++REE++ +RR+++++Q PEW++D+P DLNG GS G GW+V+PRPEGKR ++IA G T+AR +G+I + S L SG + +LDC+FHE D TFYV+D+MCW Y LY+CT+EFR YW+R KL+E+ + VS N YR P+PCY+ G+ AY P+++DGLLF K HY LG +PLVL+WKD T+RY P+ FT + + A +D V QH L EGDL +F + D P V GL FDKRCSP R +ADSW+K +FQ R+G
Sbjct: 20 RRQAVLLQQRQARRDLALHARQLLT--DDSSSGNEXXXXXXXXXXXRGSDASAAVDDGMEVSSTYANGGGDTQSKRKTREERVKQRREHFAKQLMVPEWMIDIPRDLNGKGSETGAGWYVLPRPEGKRCLVIANNGITVARIPSGSILKRFPSALPSGSHKTNASTESYCILDCIFHEHDSTFYVLDVMCWKGYLLYNCTTEFRLYWLRDKLSESTISTVSPANPYRFMPIPCYESDEHGICEAYSGTFPFLKDGLLFYMKVAHYELGLSPLVLVWKDANTSRYFVYTEKPNIVLRLDGANQFTTLEGITFFTADSD---FVKQHE---------LSEGDLAKFSFDHGYI----DDDNKPCVAGLQFDKRCSPQRALADSWTKILFQYNARSG 395
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: A0A485L567_9STRA (Snurportin-1 n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L567_9STRA) HSP 1 Score: 279 bits (714), Expect = 7.860e-86 Identity = 160/369 (43.36%), Postives = 219/369 (59.35%), Query Frame = 1
Query: 76 QQRRRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLESMEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGA--GSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGPG-CTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPDPFTGENSLLYPLATADD------PPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGSLVPV-VQGLVFDKRCSPVRPMADSWSK 1152
Q++RR+D + +QK+ARR +T H R+LA + E D + ++ A + RK++RE+++ RRD++S Q PEW++DVP DLNG G GEGW+V+PRP+GKR +++++ G TIART +G+I + S+L G + G VLDC+FHE D TFYV+D+MCW Y LYDCT+EFR YW+ KL+E V VS N R +P+P Y+C QGL AY P+ +DGLLF CKAG Y++G +PLVLLW+D T+ YD NSL + DD +VL AA + GDLLRF V+S + D + V V V GL F KRCS R +ADSW+K
Sbjct: 104 QEKRRKDAMERQKQARRDMTMHVRSLALPSVENELEDLTAAMDGTD-MDISTSAAASKSRKKTREDRVKSRRDHFSNQLMHPEWMVDVPSDLNGTKKGGANGEGWYVLPRPDGKRCLVVSSSGTTIARTSSGSILKKFPSSLPCGSRKTNIGQDQYCVLDCIFHEADDTFYVLDVMCWKGYLLYDCTAEFRFYWLHDKLSETTVDKVSAANPCRFQPIPYYECDVQGLQMAYDMTFPFTKDGLLFYCKAGLYTVGLSPLVLLWRDRHTSLYD------------NSLSLVMRVQDDLACVTLDNIVLHTLAPAFAAHEEITPGDLLRFDVASVQWRARDDSTDVSVQVTGLTFQKRCSAQRGLADSWTK 459
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: M4BKZ6_HYAAE (Snurportin-1 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BKZ6_HYAAE) HSP 1 Score: 271 bits (692), Expect = 1.170e-83 Identity = 152/370 (41.08%), Postives = 216/370 (58.38%), Query Frame = 1
Query: 85 RRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLESMEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGP-GCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPD---PFTGENSLLYPLATADDPPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGSLVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRTG 1182
RR L +Q+++RR LT HAR LA + PS + E + A+ +RK +REE++ +RR+++SRQ PEW++DVP+DLNG+ S GEGW+V+PRPEGKR +++A G T+ R +G + + S L +G + K G +LDC+F E ++TFYV+D+MCW Y LY+CT+EFR YW+R KL+E V+ N +R PVPCY+ G+ AY P+++DGLLF KAGHY +G +PL L+WKD T+R+ A P GE AT + +VL + E L +GDL F E+ D + P + GL F KRCSP R + DSW+K +FQ R+G
Sbjct: 30 RRHATLAQQRQSRRDLTAHARQLAQNQEPPS-----SPTNTQQANEDVACASAPSKRK-TREERVKQRREHFSRQLMTPEWLIDVPKDLNGSSSALGEGWYVLPRPEGKRCLVVANGGMTVVRIPSGNVLKKFPSALPNGSHKTNKSSDGYCILDCIFQEQNETFYVLDVMCWKGYLLYNCTTEFRLYWMRDKLSEGVTATVASANPFRFLPVPCYESDSTGIMTAYSTTYPFLKDGLLFYMKAGHYEMGLSPLALVWKDSNTSRFFVYSAKPSIILRLEGEKEF----ATLEG--IVLFTAEEDFVQQHELSDGDLASFSFEQHEV----DENQAPRLTGLTFVKRCSPQRALPDSWTKILFQYNARSG 383
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: D7FJ55_ECTSI (Snurportin-1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ55_ECTSI) HSP 1 Score: 276 bits (706), Expect = 3.620e-83 Identity = 168/403 (41.69%), Postives = 205/403 (50.87%), Query Frame = 1
Query: 271 EKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGP-------GCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQ--VCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRY---------------------------------------------------DGIHATPDPFTGEN------------SLLYPLATADDPPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGS------------------LVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRTGRGVISIGDI 1209
++ +RRRD+W+ Q PEW+L VP DLNGAGST G GW+VM RPEGKRV++I+A+G T+AR M GAITH + S L G G +LDCVFHELDQTF+V+DMM W Y LYDC ++FR YW+RTKL EA + V+ N YRI+P P ++C QGLA AY PVP+I+DGLLF K HY LG TPLVLLWKD + RY DG H TG + YPL TAD V + K DLLRF ++ AE + + L VQGL FDKRCS +RPMAD+WSK +FQS +R GV SI DI
Sbjct: 194 QRAIRRRDHWANQLCTPEWMLTVPSDLNGAGSTVGAGWYVMTRPEGKRVLVISAKGETVARQMCGAITHRFSSNLPGGSXXXXXXXXXXXXXXGYCILDCVFHELDQTFFVLDMMAWKGYPLYDCNTDFRFYWVRTKLLEADGPLDTVTSRNAYRIKPTPYHECDRQGLAHAYASPVPFIKDGLLFYLKTAHYQLGPTPLVLLWKDASVARYLGIQSDQAVVLKVVGDRSGAESEEERELSRGGETDAGSADHSNSPRTVSLLDGPHKGAFAATGTGGDQRGXXXXXXXAAKYPLITADGVCVGEVGPEGSPTYVPQAKANDLLRFKLTGAEEELLDQSAXXXXXXXXXXXXXXXXXALRGSVQGLRFDKRCSKLRPMADTWSKVLFQSRLRRNGGV-SIEDI 595
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Match: G4YIC3_PHYSP (Snurportin-1 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIC3_PHYSP) HSP 1 Score: 264 bits (675), Expect = 5.810e-81 Identity = 153/369 (41.46%), Postives = 216/369 (58.54%), Query Frame = 1
Query: 85 RRQDYLRKQKEARRQLTNHARNLATTADEPSHGDQHGGKIADENLESMEVANGQQQRKRSREEKLVRRRDYWSRQFACPEWILDVPEDLNGAGSTEGEGWFVMPRPEGKRVMLIAAEGRTIARTMNGAITHSWHSTLWSGGAHSRKGP-GCTVLDCVFHELDQTFYVIDMMCWSDYSLYDCTSEFRQYWIRTKLAEAQVCDVSEWNQYRIRPVPCYDCHPQGLAAAYGDPVPYIRDGLLFVCKAGHYSLGTTPLVLLWKDEATTRYDGIHATPD---PFTGENSLLYPLATADDPPVVLQHSTEYSAALGHLKEGDLLRFFVSSAELAVESDGSLVPVVQGLVFDKRCSPVRPMADSWSKAVFQSAVRT 1179
RR++ L +Q++ARR LT HAR LA + PS A ++ S A Q ++R+REE++ +RR+++S+Q PEW++DVP+DLNG+GS GEGW+V+PRPEGKR +++A G T+AR +G I + S L G + K G +LDC+F E D TFYV+D+MCW Y LY+CT+EFR YW+R KL+E V+ N +R P G+ AAY P+++DGLLF KAGHY +G +PL L+WKD T+R+ A P G+N AT + +VL + + L EGDL F E+ D + P + GL F+KRCSP R + DSW+K +FQ R+
Sbjct: 19 RRRETLAQQRQARRDLTAHARQLAQQQEPPSPSGP-----APMDVSSSSAA---QTKRRTREERVKQRREHFSKQLMTPEWLIDVPKDLNGSGSALGEGWYVLPRPEGKRCLVVANGGNTVARIPSGGILKKFPSALPCGSHKTNKSSDGYCILDCIFQEQDATFYVLDVMCWKGYLLYNCTTEFRLYWMRDKLSEGATATVTPANPFRFL------SDPAGIMAAYSTTYPFLKDGLLFYMKAGHYEMGLSPLALVWKDANTSRFYVYSAKPSIVLRLEGDNEF----ATLEG--IVLFTAGQDFIQQHELTEGDLASFSFEQHEV----DENRTPHLTGLTFEKRCSPQRALPDSWTKILFQYNARS 363 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159808 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4212 ID=mRNA_4212|Name=jgi.p|Trimin1|159808|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1266bp|location=Sequence derived from alignment at Contig_10:12892..17774+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACGAGCGTAGAGCAGCCCGGCTCCTCTGCCCCCAGGGCATCAGCGAAback to top protein sequence of jgi.p|Trimin1|159808 >Trimin1|159808|e_gw1.10.208.1 ID=Trimin1|159808|e_gw1.10.208.1|Name=jgi.p|Trimin1|159808|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=422bp MTSVEQPGSSAPRASAKSASLRRGDQQRRRQDYLRKQKEARRQLTNHARNback to top mRNA from alignment at Contig_10:12892..17774+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4212 ID=mRNA_4212|Name=jgi.p|Trimin1|159808|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4883bp|location=Sequence derived from alignment at Contig_10:12892..17774+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_10:12892..17774+ >mRNA_4212 ID=mRNA_4212|Name=jgi.p|Trimin1|159808|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1266bp|location=Sequence derived from alignment at Contig_10:12892..17774+ (Tribonema minus UTEX_B_3156 )back to top |