mRNA_4143 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348160
Unique Name	mRNA_4143
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348160 vs. uniprot
Match: A0A836CGX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX7_9STRA)

HSP 1 Score: 1095 bits (2833), Expect = 0.000e+0
Identity = 887/887 (100.00%), Postives = 887/887 (100.00%), Query Frame = 1

Query:    1 MTDKGGGDERKRVLFTAVRLNRADVIKAVATGSAAGDKAXXXXXXXXXXXXAVDPSVLDCLDDSRSFTPLHAAIDYGHMDALRMLLRLGADVAALAGGRTPVQLAFATDEFADAQQVFVTEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQVFVTEAVQAIAAGNKDRLQLLPAASLPLAADTXXXXXXXXXXXXXXXXXXXXXXXXGHGATSTSLLAWAKDAGEPEMLAALEGCLASSAAAAAVISAQPAAQRCVYVYDMYTEVYEARALHGRCGGLRRLCDTRVLTPSSVLSHLHEMSKGAPAAXXXXXXXXXXXXXXXXXXLSPGAALDADIAECRAYIAALLEERDALSGVLAARGTDRVVAVLRDVMLRVRDAHAALEEQEAELEAAEGDVARARDGNAALQAELAAARAARSXXXXXXXXXXXXXXXXXXXXADSATGELRRGERVLYVKSDAAAAXAAEAEVVKVHLEDPQSPYYTVRLLETGQERNTTAAHLRXXXXXXXXXXXXXXXXXXXXXGGAHNGAPNGXXXXXXXXXXXXREQMPAPLXXXXXXXXPXEAAAPPLSAAPQSPLAAQRMSXTIASPPRVAGSPASPQLRRAAADRRAEERRALLAQLMDTAGELMGAAGELDDEVTAMRALAVGAAADVVRRISRLRAEAADALEAARESXXXXXXXXXXXXXXXXXXXXXXXLLQAEARTALSGASSPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPIDAVAALHMEHMEAARGGGGGEVEDEVEEDVPAGRRGRPVVVSAYDDASLESALMEKARSDQANRGLWVSXXXXXXXXXSLLGMLFGWKPPADQDSSSNPIFVA 2661
            MTDKGGGDERKRVLFTAVRLNRADVIKAVATGSAAGDKAXXXXXXXXXXXXAVDPSVLDCLDDSRSFTPLHAAIDYGHMDALRMLLRLGADVAALAGGRTPVQLAFATDEFADAQQVFVTEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQVFVTEAVQAIAAGNKDRLQLLPAASLPLAADTXXXXXXXXXXXXXXXXXXXXXXXXGHGATSTSLLAWAKDAGEPEMLAALEGCLASSAAAAAVISAQPAAQRCVYVYDMYTEVYEARALHGRCGGLRRLCDTRVLTPSSVLSHLHEMSKGAPAAXXXXXXXXXXXXXXXXXXLSPGAALDADIAECRAYIAALLEERDALSGVLAARGTDRVVAVLRDVMLRVRDAHAALEEQEAELEAAEGDVARARDGNAALQAELAAARAARSXXXXXXXXXXXXXXXXXXXXADSATGELRRGERVLYVKSDAAAAXAAEAEVVKVHLEDPQSPYYTVRLLETGQERNTTAAHLRXXXXXXXXXXXXXXXXXXXXXGGAHNGAPNGXXXXXXXXXXXXREQMPAPLXXXXXXXXPXEAAAPPLSAAPQSPLAAQRMSXTIASPPRVAGSPASPQLRRAAADRRAEERRALLAQLMDTAGELMGAAGELDDEVTAMRALAVGAAADVVRRISRLRAEAADALEAARESXXXXXXXXXXXXXXXXXXXXXXXLLQAEARTALSGASSPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPIDAVAALHMEHMEAARGGGGGEVEDEVEEDVPAGRRGRPVVVSAYDDASLESALMEKARSDQANRGLWVSXXXXXXXXXSLLGMLFGWKPPADQDSSSNPIFVA
Sbjct:    1 MTDKGGGDERKRVLFTAVRLNRADVIKAVATGSAAGDKAXXXXXXXXXXXXAVDPSVLDCLDDSRSFTPLHAAIDYGHMDALRMLLRLGADVAALAGGRTPVQLAFATDEFADAQQVFVTEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQVFVTEAVQAIAAGNKDRLQLLPAASLPLAADTXXXXXXXXXXXXXXXXXXXXXXXXGHGATSTSLLAWAKDAGEPEMLAALEGCLASSAAAAAVISAQPAAQRCVYVYDMYTEVYEARALHGRCGGLRRLCDTRVLTPSSVLSHLHEMSKGAPAAXXXXXXXXXXXXXXXXXXLSPGAALDADIAECRAYIAALLEERDALSGVLAARGTDRVVAVLRDVMLRVRDAHAALEEQEAELEAAEGDVARARDGNAALQAELAAARAARSXXXXXXXXXXXXXXXXXXXXADSATGELRRGERVLYVKSDAAAAXAAEAEVVKVHLEDPQSPYYTVRLLETGQERNTTAAHLRXXXXXXXXXXXXXXXXXXXXXGGAHNGAPNGXXXXXXXXXXXXREQMPAPLXXXXXXXXPXEAAAPPLSAAPQSPLAAQRMSXTIASPPRVAGSPASPQLRRAAADRRAEERRALLAQLMDTAGELMGAAGELDDEVTAMRALAVGAAADVVRRISRLRAEAADALEAARESXXXXXXXXXXXXXXXXXXXXXXXLLQAEARTALSGASSPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPIDAVAALHMEHMEAARGGGGGEVEDEVEEDVPAGRRGRPVVVSAYDDASLESALMEKARSDQANRGLWVSXXXXXXXXXSLLGMLFGWKPPADQDSSSNPIFVA 887

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348160 vs. uniprot

BLAST of jgi.p|Trimin1|348160 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CGX7_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_20	contig	Contig_20:814454..821850 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348160\|estExt_Genemark1.C_Ctg_200108
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Ankyrin repeat-containing domain
Ec32 ortholog	Ec-08_005710.1
TranscriptId	348482
Track	FilteredModels1
ProteinId	348160

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348160	gene_4143	Tribonema minus UTEX_B_3156	gene	Contig_20 814454..821850 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4143_1	exon_4143_1	Tribonema minus UTEX_B_3156	exon	Contig_20 814454..814567 +
exon_4143_2	exon_4143_2	Tribonema minus UTEX_B_3156	exon	Contig_20 815651..815671 +
exon_4143_3	exon_4143_3	Tribonema minus UTEX_B_3156	exon	Contig_20 815816..816052 +
exon_4143_4	exon_4143_4	Tribonema minus UTEX_B_3156	exon	Contig_20 816154..816216 +
exon_4143_5	exon_4143_5	Tribonema minus UTEX_B_3156	exon	Contig_20 816350..816412 +
exon_4143_6	exon_4143_6	Tribonema minus UTEX_B_3156	exon	Contig_20 816514..816576 +
exon_4143_7	exon_4143_7	Tribonema minus UTEX_B_3156	exon	Contig_20 816732..816755 +
exon_4143_8	exon_4143_8	Tribonema minus UTEX_B_3156	exon	Contig_20 816896..816967 +
exon_4143_9	exon_4143_9	Tribonema minus UTEX_B_3156	exon	Contig_20 817011..817220 +
exon_4143_10	exon_4143_10	Tribonema minus UTEX_B_3156	exon	Contig_20 817336..817479 +
exon_4143_11	exon_4143_11	Tribonema minus UTEX_B_3156	exon	Contig_20 817596..818570 +
exon_4143_12	exon_4143_12	Tribonema minus UTEX_B_3156	exon	Contig_20 818700..818720 +
exon_4143_13	exon_4143_13	Tribonema minus UTEX_B_3156	exon	Contig_20 819412..819584 +
exon_4143_14	exon_4143_14	Tribonema minus UTEX_B_3156	exon	Contig_20 820002..820379 +
exon_4143_15	exon_4143_15	Tribonema minus UTEX_B_3156	exon	Contig_20 821042..821071 +
exon_4143_16	exon_4143_16	Tribonema minus UTEX_B_3156	exon	Contig_20 821631..821850 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4143	CDS_4143	Tribonema minus UTEX_B_3156	CDS	Contig_20 814454..814567 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_4143	UTR3_4143	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_20 821707..821850 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348160	Trimin1\|348160\|estExt_Genemark1.C_Ctg_200108	Tribonema minus UTEX_B_3156	polypeptide	Contig_20 814454..821706 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_20:814454..821850+
coding sequence from alignment at Contig_20:814454..821850+

spliced messenger RNA

>mRNA_4143 ID=mRNA_4143|Name=jgi.p|Trimin1|348160|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2808bp|location=Sequence derived from alignment at Contig_20:814454..821850+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACCGACAAGGGCGGAGGGGACGAGCGGAAGAGGGTTCTCTTCACAGC
TGTGAGGTTGAACAGGGCGGATGTGATCAAGGCAGTGGCCACTGGCTCTG
CAGCGGGCGACAAGGCCGCCGCTGCCGCCGCCCCCGCCGCCGCCGCTGCC
GCCGCCGTCGATCCCTCAGTGCTCGACTGCCTCGACGACAGCCGCAGCTT
CACGCCGCTGCACGCCGCCATCGACTACGGCCACATGGACGCGCTGCGCA
TGCTGCTGCGCCTCGGCGCGGATGTGGCAGCGCTCGCCGGCGGGCGCACG
CCCGTGCAGCTCGCGTTCGCCACGGACGAGTTTGCGGATGCTCAGCAGGT
GTTCGTCACGGAGGCCGTGCAGCTCGCGTTCGCCACGGACAAGTTTGCGG
ATGCTCAGCAGGTGTTCGTCACGGAGGCCGTGCAGCTCGCGTTTGCCACG
GACGAATTCGCGGATGCTCAGCAGGTGTTCGTCACGGAGGCCGTGCAGCT
CGCGTTCGCCACCGACGAGTTTGCGGACGCGCAGCAGGTGTTCGTCACGG
AGGCCGTGCAGGTGTTCGTCACGGAGGCCGTGCAGGCCATTGCAGCAGGC
AACAAGGACCGGCTGCAGCTGCTGCCGGCGGCGAGCCTGCCACTGGCGGC
AGACACAGCCATCGCAGCGGGCGACAAGGATCGGCTGCAGCTGCTGCTGG
CGGCGGGCCTGCCACCGGAGGCAGAGATAGGGCACGGCGCCACCTCCACG
TCGCTGCTGGCGTGGGCGAAGGACGCGGGCGAGCCGGAGATGCTCGCGGC
GCTGGAGGGCTGCCTGGCGTCGAGCGCTGCCGCTGCTGCTGTCATCAGCG
CTCAGCCAGCTGCACAGCGCTGCGTCTATGTGTATGATATGTACACGGAG
GTGTACGAGGCACGCGCGCTGCACGGCCGCTGTGGAGGTCTGCGCAGGCT
GTGCGATACCCGAGTGCTGACACCGTCATCAGTGCTCAGTCATCTGCACG
AGATGTCCAAGGGCGCGCCCGCAGCAGCAGCAGCGGGCACTACCGCCGCC
GCCGCCGCGCCGCCGCCGCCGCCGCCGCCGCTGTCCCCCGGCGCCGCCCT
CGACGCCGACATCGCGGAGTGCCGCGCGTACATCGCGGCGCTGCTGGAGG
AGCGCGACGCGCTCAGCGGCGTGCTCGCGGCGCGCGGCACGGACCGCGTC
GTGGCAGTGCTCAGGGACGTGATGCTGCGCGTGCGCGACGCGCACGCCGC
GCTCGAGGAGCAGGAGGCGGAGCTGGAGGCGGCGGAGGGCGACGTCGCGC
GCGCGCGCGACGGCAACGCCGCGCTGCAGGCGGAGCTCGCCGCCGCCCGC
GCCGCGCGCAGCAGCGCCGCCGCCGCCGCCGCTGCTGCTGCGCAGACGGC
GGCCGCTGGCGGCGGCGGCGGTGCAGATAGCGCGACAGGGGAGCTGAGGC
GCGGCGAGCGTGTGCTGTACGTGAAGTCTGACGCGGCGGCGGCGGCGGCG
GCGGAGGCGGAGGTGGTGAAGGTGCACCTGGAGGATCCCCAGTCGCCGTA
TTACACCGTGCGGCTGCTGGAGACGGGGCAGGAGCGCAACACCACCGCCG
CGCACCTGCGGCGGCATGGCGCCGCTGCAGGCAGCAGCGGCGGCGGCGGC
GGCGGCGCCGCCAACGAGCAGCAGGGCGGCGCGCACAATGGAGCACCGAA
CGGCAGCGCCGCCGGTAGCGGGGGGGCTGGTGACGGCGCACGCGAGCAGA
TGCCGGCACCTCTGCCAGCAGCAGCAGCAGCAGCAGCGCCGGCGGAGGCA
GCGGCGCCGCCGCTGTCGGCAGCGCCGCAGTCGCCATTGGCGGCGCAGCG
TATGTCGCCCACCATTGCATCGCCGCCGCGCGTGGCGGGTTCGCCGGCTA
GCCCGCAGCTGCGGCGGGCGGCGGCGGATCGGCGCGCGGAGGAGCGGCGC
GCGCTGCTGGCGCAGCTCATGGACACGGCGGGAGAGCTCATGGGCGCGGC
GGGAGAGCTGGACGATGAGGTCACCGCGATGCGCGCGCTCGCGGTGGGCG
CCGCCGCCGACGTCGTGCGGCGCATCTCGCGGCTGCGCGCGGAGGCGGCG
GACGCGCTCGAGGCGGCAAGGGAGAGCGCCACCGCTGCGGAGCGCTGGCG
CGCGCAGGCGGCGGCGCTGCAGCGACATGGTGCTCAGCTATCAGCGCTTC
TGCAGGCGGAGGCGCGCACAGCGTTGAGCGGCGCCAGCTCCCCCATAGCC
GCTGCCGCTGCCGCCGCCGCCGCCGCATTGCCGGCGCGCCGCCGCAGCAG
CGGCAGCAGCGAGCGGCGCAACGGCGCTGCCGCCGCCGCGCACGTGCCGA
TCGACGCAGTCGCGGCGCTGCACATGGAGCACATGGAGGCGGCGCGCGGC
GGCGGCGGCGGTGAAGTTGAAGATGAAGTTGAAGAGGACGTGCCCGCGGG
CAGGCGCGGCCGCCCGGTGGTGGTGTCGGCGTACGACGACGCGTCGCTGG
AGAGCGCGCTGATGGAGAAGGCGCGCAGCGACCAGGCGAACCGCGGCCTG
TGGGTCAGTGATGAGGCGAACTGCGGCCTGTGGGTCAGCCTGCTCGGCAT
GCTGTTTGGGTGGAAGCCGCCGGCTGACCAGGACAGCAGCAGCAATCCCA
TATTTGTGGCGTAAATGCATCCGGCTTAAGGGCCTTGGGGGCAGGCGGCA
GTATCACAGCAAGTGGGCCTCGCATTCAGGCTTTGCTACATGGTTTTTGT
GTACGTTTATGTTCACTGGTGCCTGCAGTATCTCGCCATATACAAAGTCA
CATATCCC

protein sequence of jgi.p|Trimin1|348160

>Trimin1|348160|estExt_Genemark1.C_Ctg_200108 ID=Trimin1|348160|estExt_Genemark1.C_Ctg_200108|Name=jgi.p|Trimin1|348160|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=888bp
MTDKGGGDERKRVLFTAVRLNRADVIKAVATGSAAGDKAAAAAAPAAAAA
AAVDPSVLDCLDDSRSFTPLHAAIDYGHMDALRMLLRLGADVAALAGGRT
PVQLAFATDEFADAQQVFVTEAVQLAFATDKFADAQQVFVTEAVQLAFAT
DEFADAQQVFVTEAVQLAFATDEFADAQQVFVTEAVQVFVTEAVQAIAAG
NKDRLQLLPAASLPLAADTAIAAGDKDRLQLLLAAGLPPEAEIGHGATST
SLLAWAKDAGEPEMLAALEGCLASSAAAAAVISAQPAAQRCVYVYDMYTE
VYEARALHGRCGGLRRLCDTRVLTPSSVLSHLHEMSKGAPAAAAAGTTAA
AAAPPPPPPPLSPGAALDADIAECRAYIAALLEERDALSGVLAARGTDRV
VAVLRDVMLRVRDAHAALEEQEAELEAAEGDVARARDGNAALQAELAAAR
AARSSAAAAAAAAAQTAAAGGGGGADSATGELRRGERVLYVKSDAAAAAA
AEAEVVKVHLEDPQSPYYTVRLLETGQERNTTAAHLRRHGAAAGSSGGGG
GGAANEQQGGAHNGAPNGSAAGSGGAGDGAREQMPAPLPAAAAAAAPAEA
AAPPLSAAPQSPLAAQRMSPTIASPPRVAGSPASPQLRRAAADRRAEERR
ALLAQLMDTAGELMGAAGELDDEVTAMRALAVGAAADVVRRISRLRAEAA
DALEAARESATAAERWRAQAAALQRHGAQLSALLQAEARTALSGASSPIA
AAAAAAAAALPARRRSSGSSERRNGAAAAAHVPIDAVAALHMEHMEAARG
GGGGEVEDEVEEDVPAGRRGRPVVVSAYDDASLESALMEKARSDQANRGL
WVSDEANCGLWVSLLGMLFGWKPPADQDSSSNPIFVA*

mRNA from alignment at Contig_20:814454..821850+

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4143 ID=mRNA_4143|Name=jgi.p|Trimin1|348160|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7397bp|location=Sequence derived from alignment at Contig_20:814454..821850+ (Tribonema minus UTEX_B_3156 )
ATGACCGACAAGGGCGGAGGGGACGAGCGGAAGAGGGTTCTCTTCACAGC
TGTGAGGTTGAACAGGGCGGATGTGATCAAGGCAGTGGCCACTGGCTCTG
CAGCGGGCGACAAGGTCAGTTTCCGTGCCTCAATAAAGGCATTAAGGTCA
CGACAGACCTTTATGCTGCTTCATGTTGTTTCTTTTGGGGTCCACCGCTG
GCAGCGGCTGTTCTGCTTTGTCTTGTTGGCAAAACTTGATGCACAGGCAG
TTGATGATCTCAGCATCTCACTGCTCTCCTGTTGTGAGCTGCGGGAGGCG
TAATTCACACTTGTGCGAGGAGCCAGGGAATCAACTACATGCACCTGCGC
CAGACGCTCATTCCTTTCCTAGCCTAAAGAAGCAAAAGCTGGTCATCAGT
GGTTGATTTACGAATGTATGGAGTGGCATGATTTTGGCTCACAGTTGCAA
TCGTGCACACTGGATGTGCTCATGCAGGAACAGCATTGTAAATATTCACG
CTTTGCTGTAAAGCAGATGCTGTTGTGGGCATCAAGGCAACAAGACATTT
CACATGGCTGCAACCACATGCGAGCCCTTCAGGTGTTTGGTGACTGGTGC
TCATCCTAATCATTGGATCATCCGATACTGATGTGCAGCGATGCTTAACA
CAAGCAGGCCATACACACAGGATCTTAAACAACAGTGCGCTGCACGTCAC
AGCTGTGAGCACGATCGTTGACCCGCTGTCGATAGCCATGGCCTGGCAGC
ACTAGGTTTTACGCGTCAGCTTTCATGGCAGCCCTGCTGCCGCTCCGTGT
GGCCTTGATGCCAACAAATATGCATCGTCTGATAAAGTTGAGGATCATCG
CTCGAAGTTGCTGAAAGACTTGCGTGGCGCATGCTTCGGCTATGCTGCTA
GGATCAAGTGATACAGTTGACGTTTACGCTTGCAGCAGGCACACTGCCCT
TGTCAGACTCCAACAGCTTCTACCACGCAGCGCAAACGGCACAGCAAAGT
ACTACAGTGACTGCGCACGCGGCCGATCACAGGCCCCCGCTCAACTGCAC
TTGAGCAGGTAGGTGCTCAGGGTTTGCGCTGCAAATCCTAGCCCTTGTCC
GTGTCCGCACACACACGGCCACAGTGATGAAATCATGAGCTCATCCGCCT
CCTTCCAATGACTTCATGAATTGATGTTTCTCGCGTACACGCCCCAGGCC
GCCGCTGCCGCCGCCCCCGTCGATGCCTCAGTGCTCAACTGCTTGGGCGA
CAGCCGCAGCTTCACGCCGCTGCACGCAGCCAGTCACAGTGATCAATTCA
CCACTTCATCCATCTCTATCCAACAAATTCATGAATATATCTGTCGCGCG
TACACGCCCCAGGCCGCCGCCGCTGCCGCCGCCGTCGATCCCTCAGTGCT
CGACTGCCTCGACGACAGCCGCAGCTTCACGCCGCTGCACGCCGCCATCG
ACTACGGCCACATGGACGCGCTGCGCATGCTGCTGCGCCTCGGCGCGGAT
GTGGCAGCGCTCGCCGGCGGGCGCACGCCCGTGCAGCTCGCGTTCGCCAC
GGACGAGTTTGCGGATGCTCAGCAGGTGTTCGTCACGGAGGCCGTGCAGG
TGGGAGATGTGGTATGATGTAGTGAATGCATGATTGTTGAATACCTGATT
GCATTTATTATATAAGTTGTGGCGGCGTCGGCGGGCGCACGCCCGTGCAG
CTCGCGTTCGCCACGGACAAGTTTGCGGATGCTCAGCAGGTGTTCGTCAC
GGAGGCCGTGCAGGTGGGCAGCACGCTGTAGAATCTATTTACGATATAGT
TCGCAGCATATACCACGAAACAGTGAACTGTACTTCGATGTGCCCTGCTG
GAGTTGAAGTCATTACGCTAGCGCTGGCGGGCGCACGCCCGTGCAGCTCG
CGTTTGCCACGGACGAATTCGCGGATGCTCAGCAGGTGTTCGTCACGGAG
GCCGTGCAGGTGGGCAGAATAACCACAATGTAGTGAATGCATGACTGTTG
CACACTTCGTTCATGATGGATGTCGTGGCAGCGCTCGCCGGCGGACGCCC
GCCCGTGCAGCTCGCGTTCGCCACCGACGAGTTTGCGGACGCGCAGCAGG
TGTTCGTCACGGAGGCCGTGCAGGTACGCAGCGACCTCTTCTGAAGGTTT
TACCATGAAGCAGTAAACTGTACGCTGCTGAGGTTACAGTCATTACAAAG
GATGCGGCAGCGCTCGCCGGCGGGCGGACACCAGCGCAGCTTGCGTTCGC
GACGGACGAGTTTGCGGATGCGCAGTAGGTGTTCGTCACGGAGGCCGTGC
AGGTGGGTGGATGTACATACTCTCAGGCCATTGCAGCGGGCGACAAGGAT
GCGGCTGCAGCAGCTGCTGGCGGCAGGCCTGCCACCGGAGGCGGATATAC
GGCCCGATCTGACGCTGCCCCCCCCCCCCTGCCACCCCTCAGGCCATTGC
AGCAGGCAACAAGGACCGGCTGCAGCTGCTGCCGGCGGCGAGCCTGCCAC
TGGCGGCAGACACAGTGCCCGAACTGACCCTATTTCGCCCCCCCTGGTAC
CCCTCAGGCCATCGCAGCGGGCGACAAGGATCGGCTGCAGCTGCTGCTGG
CGGCGGGCCTGCCACCGGAGGCAGAGATAGGGCACGGCGCCACCTCCACG
TCGCTGCTGGCGTGGGCGAAGGACGCGGGCGAGCCGGAGATGCTCGCGGC
GCTGGAGGGCTGCCTGGCGTCGAGCGCTGCCGCTGCTGCTGTCATCAGCG
CTCAGCCAGCTGCACAGGTATGTATGTATGTAGGTACGCGTCGCAGTCGC
GGCAATTGGCACTGTGCGGCGATGTGTGTGATATATACAGGGAGGCACAC
AGTATGTGAGCGACTGCACGGCCGCTGTGGAGCGCTGCGTCTATGTGTAT
GATATGTACACGGAGGTGTACGAGGCACGCGCGCTGCACGGCCGCTGTGG
AGGTCTGCGCAGGCTGTGCGATACCCGAGTGCTGACACCGTCATCAGTGC
TCAGTCATCTGCACGAGATGTCCAAGGTATCTGTGATATGTGTCATGTAC
ATGAGCACCGCCTACAGTGCTCGTTATGTAATGCATCACGCTCACTGGCG
CCCCCTCCCCCTCCTCCCGCCGCCGGCGCCGCCGCACACCAGGGCGCGCC
CGCAGCAGCAGCAGCGGGCACTACCGCCGCCGCCGCCGCGCCGCCGCCGC
CGCCGCCGCCGCTGTCCCCCGGCGCCGCCCTCGACGCCGACATCGCGGAG
TGCCGCGCGTACATCGCGGCGCTGCTGGAGGAGCGCGACGCGCTCAGCGG
CGTGCTCGCGGCGCGCGGCACGGACCGCGTCGTGGCAGTGCTCAGGGACG
TGATGCTGCGCGTGCGCGACGCGCACGCCGCGCTCGAGGAGCAGGAGGCG
GAGCTGGAGGCGGCGGAGGGCGACGTCGCGCGCGCGCGCGACGGCAACGC
CGCGCTGCAGGCGGAGCTCGCCGCCGCCCGCGCCGCGCGCAGCAGCGCCG
CCGCCGCCGCCGCTGCTGCTGCGCAGACGGCGGCCGCTGGCGGCGGCGGC
GGTGCAGATAGCGCGACAGGGGAGCTGAGGCGCGGCGAGCGTGTGCTGTA
CGTGAAGTCTGACGCGGCGGCGGCGGCGGCGGCGGAGGCGGAGGTGGTGA
AGGTGCACCTGGAGGATCCCCAGTCGCCGTATTACACCGTGCGGCTGCTG
GAGACGGGGCAGGAGCGCAACACCACCGCCGCGCACCTGCGGCGGCATGG
CGCCGCTGCAGGCAGCAGCGGCGGCGGCGGCGGCGGCGCCGCCAACGAGC
AGCAGGGCGGCGCGCACAATGGAGCACCGAACGGCAGCGCCGCCGGTAGC
GGGGGGGCTGGTGACGGCGCACGCGAGCAGATGCCGGCACCTCTGCCAGC
AGCAGCAGCAGCAGCAGCGCCGGCGGAGGCAGCGGCGCCGCCGCTGTCGG
CAGCGCCGCAGTCGCCATTGGCGGCGCAGCGTATGTCGCCCACCATTGCA
TCGCCGCCGCGCGTGGCGGGTTCGCCGGCTAGCCCGCAGCTGCGGCGGGC
GGCGGCGGATCGGCGCGCGGAGGAGCGGCGCGCGCTGCTGGCGCAGCTCA
TGGACACGGCGGGAGAGGTGCGTGCATACATACCTCTGTTTGAAAGTAGA
AGTGGAGGGTCGAGCGCTGTTGGCACAGGAGCGTGCACACATGCCCATGT
ATTCAAGTAGAGAAATATCAGATGAGAGTCGCGCGCTGCTGCGCAGCTCA
TGGGCGCGGCGGGAGAGGTGCGCACATGCGTACCTCTGTAGAAGGGGAGT
GTTGAGCGCTGCTGGCACAGCTTGTGGTCGCGCCACGTGGAGGAGCGCGC
ATACGTGCGCATGTGCATACGAGTAGTGGAGTAAATACCAGAAGGGCGTA
TCGCACGCTGCTGGCGCAGCTCGTGGACGCGACGGGAGAGTACATACATA
CTGGCGGTATGTGTACGTAGTTGTAATTGGTTGTGGTATTGGAGGAGCCG
CGCCGTGCTTGCACAGCGCGCTGCGACGCGCACGTGCAGCGGTGGGGCGT
GGAGCGCTGCTGCAGACCAAAACGCGGCTGGCACTTGAGAGTAGAGCTGG
GCACTGCTTGCGCTTGAAGAGCAGTGCCGAGCGCGCTGCTGGCAGAACCG
TCATGTGCATCCACGGCGCTGCCGTGCAGGGGTCGCAGCGACGGCGCACA
CAACTTCCTTGTCGGTGATGTCCGAACGCGATGTCTTCTCTGATCCAACA
AGCCCCCAACCCCCACCCCACCCCCGCCCCCACCCCCCCCCCCCCTTCCC
CCCCTCGTAAAGCTGGACGATGAGGTGACTGCGATGCGCTTTTGTTTGAA
CGCGGTGTCCCTTTCCCTTTTGTTGGCCAGGGCTCATCAACATGCCAATG
CGTAATGCGTATGCCTCTTATGGTCCATATGTACCCCCCCCCCCCCCTGC
TCACACAGCTGGACGATGAGGTCACCGCGATGCGCGCGCTCGCGGTGGGC
GCCGCCGCCGACGTCGTGCGGCGCATCTCGCGGCTGCGCGCGGAGGCGGC
GGACGCGCTCGAGGCGGCAAGGGAGAGCGCCACCGCTGCGGAGCGCTGGC
GCGCGCAGGCGGCGGCGCTGCAGCGACATGGGTGAGCCGTGCTGCATGTC
ATTCTCCATGTCATTTCGTTGGGTTTATAGTTGAAGTCTGTGTCGGCGCC
GCGGAGCGCTGGCGGACGCAGGCAGCGGCGCCGCAGCGAAGCTGGTGAGC
GGTTTTCGCTGTGGGTATCGAAGCATGCCACGGTGTGACAGTTACTCCAG
CAGTTGATGCTTTCTGCCAGCGCTGCCGCCTGCGCGCTGGCGATGGTTAA
AACAAGTTCAAGTTGGTGTCAGTGCCGCCGACGCAGAGCGCTGACGCACG
CAAGCGCCGCAGCGACACGGGTGCGATGTGGTGCCATCCATGCGCCACTG
TCCCTTGTTTGATGCGCGTAGCTGCTGCGCCGTCACGCTGTACTTGACCT
CCCCCCCCCCCCCCTCCCCCCCTCCCCCCCCCCGCGGAACACACACAGTG
CTCAGCTATCAGCGCTTCTGCAGGCGGAGGCGCGCACAGCGTTGAGCGGC
GCCAGCTCCCCCATAGCCGCTGCCGCTGCCGCCGCCGCCGCCGCATTGCC
GGCGCGCCGCCGCAGCAGCGGCAGCAGCGAGCGGCGCAACGGCGCTGCCG
CCGCCGCGCACGTGCCGATCGACGCAGTCGCGGCGCTGCACATGGAGCAC
ATGGAGGCGGCGCGCGGCGGCGGCGGCGGTGAAGTTGAAGATGAAGTTGA
AGAGGACGTGCCCGCGGGCAGGCGCGGCCGCCCGGTGGTGGTGTCGGCGT
ACGACGACGCGTCGCTGGAGAGCGCGCTGATGGAGAAGGCGCGCAGCGAC
CAGGCGAACCGCGGCCTGTGGGTCAGGTGAGCGATGGTGACTCTCCTTTT
GCCTGTGAAGAATCCTAATGGTGGCGAATTTTAGGGTCACGCCACTCTCC
GTATGGCTGCACTCAAGTTTCCTAAAAAAAAGCATGAGTCGGTGCATAGG
GTAAACGTAGCGTGAAGATATTGGATGCTGCACACCACCTTCTACACTAC
GCGCATTCAAGAGCGCTGTCAATAGCTGCTGCACCTCCTGTGTTTGGGCT
ACCAGCTGGAGCTGGCCTACCGAACACGTGAGACCTTTCCATACTGAACA
CCCATGCCCTCGAACGCTACAAAGCTCGCACACAGAAGTCTTCTGACCTG
TGGATATGATGGCACTGTTTGACTCGTGGCCAATGACTGCAACAGCGGCG
ACCACGGTTATTGGTGGAAGGCACTTGCGGCTAGCCATCCTTTGTCACCT
AGAGCTCTACGATCTTTTGATTCGTTTCCATGCGGTATGACTATACTGAG
TCTAGGGGCTGGGCGATGCGCGCGCTGCTGCAATTGCGCGCAGCGACCAG
GCGAACGCGGCCTGTGGGTCAGGTGAATGGTGACTCTCCATGTACATCTC
GAGTGTGGCTACACGAGGTCAAGGCTACTGTAGTGCCGCGCAGTACACGT
GAACTGGTGCTCAGGGTGATTGCATCGTCTCCGCGCAGTGATGAGGCGAA
CTGCGGCCTGTGGGTCAGGTGAGTGGTGGTGACTCTCTCCTCACGGCAAG
CTCTGAGACACCCGTACTACCAGCATGGGGTGACGTTGAAGTTGTGGTGG
TGTAGTTGACTTTGGCAGTTGGGGGTTTGTGGTTGTAGAGTCAAGGGCTG
AGGAGAAGGCGCGCAGCGATCAGGCGAACTGCAGCCTGTGAGTCAGGTGA
GCGGTGACTCTCCCCGTAGCCGCCGCATATGCTAACCCTTGTGTGCAGAA
GTATGTACCTGAGCAAGAATGAATGACAAGTACATGTCGTTGAGACACTT
TCAGAAGTCACACGACATGCAGATTCCGTACAGCAGCATCAAGTTAGACC
ATCATTTGAGCTTTTTCGCGCCCTGAGCGAGAATTAATAAAAAGTACAGG
GTGCATGGACATGGCACGCACCCTGGTCAATGCAGGTGCTACTTTTTTTG
TGCATTCAACCAGTAAAGGGGCTGCCCCCCCCCCCCCCGCCCCGCCCCCC
GCGTCATCCACAGTGCTCAACACCCCCCTCCTCCTCCCCCCGCAACTGCT
TGCCCCCTGCCTGCTGGTATCGTGCAGCCTGCTCGGCATGCTGTTTGGGT
GGAAGCCGCCGGCTGACCAGGACAGCAGCAGCAATCCCATATTTGTGGCG
TAAATGCATCCGGCTTAAGGGCCTTGGGGGCAGGCGGCAGTATCACAGCA
AGTGGGCCTCGCATTCAGGCTTTGCTACATGGTTTTTGTGTACGTTTATG
TTCACTGGTGCCTGCAGTATCTCGCCATATACAAAGTCACATATCCC

Coding sequence (CDS) from alignment at Contig_20:814454..821850+

>mRNA_4143 ID=mRNA_4143|Name=jgi.p|Trimin1|348160|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2664bp|location=Sequence derived from alignment at Contig_20:814454..821850+ (Tribonema minus UTEX_B_3156 )
ATGACCGACAAGGGCGGAGGGGACGAGCGGAAGAGGGTTCTCTTCACAGC
TGTGAGGTTGAACAGGGCGGATGTGATCAAGGCAGTGGCCACTGGCTCTG
CAGCGGGCGACAAGGCCGCCGCTGCCGCCGCCCCCGCCGCCGCCGCTGCC
GCCGCCGTCGATCCCTCAGTGCTCGACTGCCTCGACGACAGCCGCAGCTT
CACGCCGCTGCACGCCGCCATCGACTACGGCCACATGGACGCGCTGCGCA
TGCTGCTGCGCCTCGGCGCGGATGTGGCAGCGCTCGCCGGCGGGCGCACG
CCCGTGCAGCTCGCGTTCGCCACGGACGAGTTTGCGGATGCTCAGCAGGT
GTTCGTCACGGAGGCCGTGCAGCTCGCGTTCGCCACGGACAAGTTTGCGG
ATGCTCAGCAGGTGTTCGTCACGGAGGCCGTGCAGCTCGCGTTTGCCACG
GACGAATTCGCGGATGCTCAGCAGGTGTTCGTCACGGAGGCCGTGCAGCT
CGCGTTCGCCACCGACGAGTTTGCGGACGCGCAGCAGGTGTTCGTCACGG
AGGCCGTGCAGGTGTTCGTCACGGAGGCCGTGCAGGCCATTGCAGCAGGC
AACAAGGACCGGCTGCAGCTGCTGCCGGCGGCGAGCCTGCCACTGGCGGC
AGACACAGCCATCGCAGCGGGCGACAAGGATCGGCTGCAGCTGCTGCTGG
CGGCGGGCCTGCCACCGGAGGCAGAGATAGGGCACGGCGCCACCTCCACG
TCGCTGCTGGCGTGGGCGAAGGACGCGGGCGAGCCGGAGATGCTCGCGGC
GCTGGAGGGCTGCCTGGCGTCGAGCGCTGCCGCTGCTGCTGTCATCAGCG
CTCAGCCAGCTGCACAGCGCTGCGTCTATGTGTATGATATGTACACGGAG
GTGTACGAGGCACGCGCGCTGCACGGCCGCTGTGGAGGTCTGCGCAGGCT
GTGCGATACCCGAGTGCTGACACCGTCATCAGTGCTCAGTCATCTGCACG
AGATGTCCAAGGGCGCGCCCGCAGCAGCAGCAGCGGGCACTACCGCCGCC
GCCGCCGCGCCGCCGCCGCCGCCGCCGCCGCTGTCCCCCGGCGCCGCCCT
CGACGCCGACATCGCGGAGTGCCGCGCGTACATCGCGGCGCTGCTGGAGG
AGCGCGACGCGCTCAGCGGCGTGCTCGCGGCGCGCGGCACGGACCGCGTC
GTGGCAGTGCTCAGGGACGTGATGCTGCGCGTGCGCGACGCGCACGCCGC
GCTCGAGGAGCAGGAGGCGGAGCTGGAGGCGGCGGAGGGCGACGTCGCGC
GCGCGCGCGACGGCAACGCCGCGCTGCAGGCGGAGCTCGCCGCCGCCCGC
GCCGCGCGCAGCAGCGCCGCCGCCGCCGCCGCTGCTGCTGCGCAGACGGC
GGCCGCTGGCGGCGGCGGCGGTGCAGATAGCGCGACAGGGGAGCTGAGGC
GCGGCGAGCGTGTGCTGTACGTGAAGTCTGACGCGGCGGCGGCGGCGGCG
GCGGAGGCGGAGGTGGTGAAGGTGCACCTGGAGGATCCCCAGTCGCCGTA
TTACACCGTGCGGCTGCTGGAGACGGGGCAGGAGCGCAACACCACCGCCG
CGCACCTGCGGCGGCATGGCGCCGCTGCAGGCAGCAGCGGCGGCGGCGGC
GGCGGCGCCGCCAACGAGCAGCAGGGCGGCGCGCACAATGGAGCACCGAA
CGGCAGCGCCGCCGGTAGCGGGGGGGCTGGTGACGGCGCACGCGAGCAGA
TGCCGGCACCTCTGCCAGCAGCAGCAGCAGCAGCAGCGCCGGCGGAGGCA
GCGGCGCCGCCGCTGTCGGCAGCGCCGCAGTCGCCATTGGCGGCGCAGCG
TATGTCGCCCACCATTGCATCGCCGCCGCGCGTGGCGGGTTCGCCGGCTA
GCCCGCAGCTGCGGCGGGCGGCGGCGGATCGGCGCGCGGAGGAGCGGCGC
GCGCTGCTGGCGCAGCTCATGGACACGGCGGGAGAGCTCATGGGCGCGGC
GGGAGAGCTGGACGATGAGGTCACCGCGATGCGCGCGCTCGCGGTGGGCG
CCGCCGCCGACGTCGTGCGGCGCATCTCGCGGCTGCGCGCGGAGGCGGCG
GACGCGCTCGAGGCGGCAAGGGAGAGCGCCACCGCTGCGGAGCGCTGGCG
CGCGCAGGCGGCGGCGCTGCAGCGACATGGTGCTCAGCTATCAGCGCTTC
TGCAGGCGGAGGCGCGCACAGCGTTGAGCGGCGCCAGCTCCCCCATAGCC
GCTGCCGCTGCCGCCGCCGCCGCCGCATTGCCGGCGCGCCGCCGCAGCAG
CGGCAGCAGCGAGCGGCGCAACGGCGCTGCCGCCGCCGCGCACGTGCCGA
TCGACGCAGTCGCGGCGCTGCACATGGAGCACATGGAGGCGGCGCGCGGC
GGCGGCGGCGGTGAAGTTGAAGATGAAGTTGAAGAGGACGTGCCCGCGGG
CAGGCGCGGCCGCCCGGTGGTGGTGTCGGCGTACGACGACGCGTCGCTGG
AGAGCGCGCTGATGGAGAAGGCGCGCAGCGACCAGGCGAACCGCGGCCTG
TGGGTCAGTGATGAGGCGAACTGCGGCCTGTGGGTCAGCCTGCTCGGCAT
GCTGTTTGGGTGGAAGCCGCCGGCTGACCAGGACAGCAGCAGCAATCCCA
TATTTGTGGCGTAA