mRNA_4112 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|162326
Unique NamemRNA_4112
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: A0A836CJU3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU3_9STRA)

HSP 1 Score: 1066 bits (2756), Expect = 0.000e+0
Identity = 647/647 (100.00%), Postives = 647/647 (100.00%), Query Frame = 1
Query:    1 MSKASGSRPSTAGAGGARFRRXXXXXXXXXXDAPTYRTPRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKVRQRCVARGGGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIKGIAGQHARDAGDVRARLWRQGAALSDDEVELGGDIDARTQRQXXXXXXXXXXXXXXXGWEDPSPSPSRSPIDRGGDQRSPPLRRRSGGAQNHQVLAHRPGPGGGGSIERVRRKLLERGGAGLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWDGDKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDAVDVRARLWRQG 1941
            MSKASGSRPSTAGAGGARFRRXXXXXXXXXXDAPTYRTPRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKVRQRCVARGGGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIKGIAGQHARDAGDVRARLWRQGAALSDDEVELGGDIDARTQRQXXXXXXXXXXXXXXXGWEDPSPSPSRSPIDRGGDQRSPPLRRRSGGAQNHQVLAHRPGPGGGGSIERVRRKLLERGGAGLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWDGDKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDAVDVRARLWRQG
Sbjct:    1 MSKASGSRPSTAGAGGARFRRXXXXXXXXXXDAPTYRTPRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKVRQRCVARGGGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIKGIAGQHARDAGDVRARLWRQGAALSDDEVELGGDIDARTQRQXXXXXXXXXXXXXXXGWEDPSPSPSRSPIDRGGDQRSPPLRRRSGGAQNHQVLAHRPGPGGGGSIERVRRKLLERGGAGLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWDGDKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDAVDVRARLWRQG 647          
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: A0A2R5GMX4_9STRA (Calcium-dependent protein kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMX4_9STRA)

HSP 1 Score: 338 bits (867), Expect = 2.300e-98
Identity = 237/635 (37.32%), Postives = 322/635 (50.71%), Query Frame = 1
Query:  286 KVRQRCVARGGGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIK-------------------------GIAGQ-HARDAGDVRARLWRQGA---------------------ALSDDEVELGGD----------IDARTQRQXXXXXXXXXXXXXXXGWED-----------PSPSPSRSPIDRGGDQRSPPLRR-------------RSGGAQNHQVLAHRPGPGGGGSIERVRRKLLERGGA-GLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWDG-DKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDA-VDVRARLWRQ 1938
            ++R++   RGG +G+++L+RLLR+MD+ GDG L RTELK+GL+D G+ ++ AELD +    D +  G +SFDEFLAGMRGPL  RR  LI  AF  LD  G G V +E+L   Y  +  P+V++G    A  L  FLAQ+DT D DG V+  EF++YY++VSASIDDDDYFELMMRNAW +SGG  G   NT NRRVLV   D G++ +EEIK                         G  G  HA +     AR  +  +                     A +     + GD          +D     +               G +D            S S   +   RG  +  P +               +SG     ++ A+  G     ++ERV++ + +RGG  G+ GL R +  MD  GD  L + EL  G     V L+  ++  +FA FD+DR+G IS++EF  GLR  L+ RR+D                    DL  +YD S HP  ++G  T    LREFL  +DG +KDG VT+ EF  YY+ LSA ID D+YFELMMRNAW +SGG  G C NTAN+RVLV  +DG + VEE+          A   VRAR+ ++
Sbjct:  260 RLREKVKERGGANGINSLSRLLRIMDDSGDGCLSRTELKYGLQDYGIRINNAELDELFTFLDRDRSGKISFDEFLAGMRGPLSKRRLDLIHTAFGRLDRTGDGVVTLEDLEMTYDPSHDPDVQAGRTEPADALRVFLAQFDTIDQDGIVTELEFQEYYKNVSASIDDDDYFELMMRNAWHISGG-KGQTANTTNRRVLVTHAD-GSQTIEEIKDDLWVDKNDHVEMKRRLAQANVHAQGDLGMYHASETTSAPARRAKPASLSQRHAASKPLSSTRRHEPTLAFAHGNESIPGDQXXXXXXXRPVDESASAEDPMKKLGKLLQARRMGIDDFLLRIGANRVMGSASIDVAAFIRGLSRFDPTMSEQDAEAIARAADSDKSGSIDVAELCAYLQGAS---ALERVKQVVTQRGGMNGIVGLTRILRNMDVSGDLALDRRELADGFAALNVKLSSKDVQDLFAYFDKDRNGKISVDEFLIGLRGDLNSRRKDLVALAFARVDRTGDGILTVQDLELSYDPSQHPDFKAGTKTKTQVLREFLDSFDGLEKDGVVTQDEFFDYYKGLSASIDDDNYFELMMRNAWHISGG-TGQCANTANRRVLVTQKDGRQTVEEVHDDLYMDKHQAHAQVRARMGKE 888          
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: A0A6G0WBJ6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBJ6_9STRA)

HSP 1 Score: 322 bits (824), Expect = 7.240e-98
Identity = 199/512 (38.87%), Postives = 285/512 (55.66%), Query Frame = 1
Query:  286 KVRQRCVARGGGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGG--AERVEEIKGIAGQHARDAGDV---RARLWRQGAALSDDEVELGGD-IDARTQRQXXXXXXXXXXXXXXXGWEDPSPSPSRSPIDRGGDQRSPPLRRRSGGAQNHQVLAHRPGPG---GGGSIERVRRKLLERGGA-GLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWD-GDKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLS 1788
            +++   + RGG  G+H ++R++R+MDN GD +L R E ++GLRD GV ++ AELD +   FD + DGF+SFDEFL  +RG +   R ++I  AF  LD    G V +++LR  Y  ++HPE   G K++  +L +FL+QWDT+D DG ++  EF +YYR+VSASIDDD+YFELM+RNAW LSGG  G C N+  +R+L+   DG    E V E   +A QH +++  +   +  L+    +L     +LG + +    Q +                 +           D  G Q              HQ L+ R G      G  +E+++ KL+ RGGA GL  + R + I D DGD +L+K ELK  L   GV + L E+D +   FD DR+G I  +E   GLR  ++ +R+                     DL R YD S +P V +G ++ + AL  F+AQWD   KDG VT  EF+AYY+ +SALIDGDDYFELM+RNAW+LS
Sbjct:   42 RIKASLLKRGGSHGIHGISRMMRIMDNSGDKKLSRDEFRFGLRDFGVDVTEAELDSLIQAFDCDQDGFISFDEFLVALRGDINPARLSMIEMAFQKLDRTHDGQVTIDDLRNVYDVSKHPEFIQGIKSKDVILDEFLSQWDTKDHDGIITMDEFVEYYRNVSASIDDDNYFELMIRNAWHLSGG-KGQCANSTIKRMLMTHPDGHQTVEEVPESSELAPQHTKESDPLAYCKKLLFDPPCSLDMLAQKLGANRVFGNGQERIHAKVFVRTLFQLDKTLDFQQAQHIAKIFDPKGIQIIDVQ-------FIHQTLSDRFGKMQQVSGNVVEKLKAKLVARGGALGLHSVRRLMRICDEDGDGKLSKVELKKALAQYGVSINLQEVDHLLTLFDTDRNGTICFDELFVGLRGSMNDKRQILVKEAFKKLDVHGQGHITIDDLRRQYDTSRNPEVMAGKISERQALINFMAQWDTATKDGIVTFDEFEAYYQNVSALIDGDDYFELMIRNAWQLS 545          
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: A0A7S3PJB3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJB3_9STRA)

HSP 1 Score: 314 bits (805), Expect = 1.840e-93
Identity = 212/587 (36.12%), Postives = 309/587 (52.64%), Query Frame = 1
Query:  322 DGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIKGIAGQHARDAGDVRARLWRQG----------------AALSDDEVELGG---DIDARTQRQXXXXXXXXXXXXXXXGWEDPSP---SPSRSPIDRG-----------GDQRSPPLRRRSGGAQNHQVLA------------HRPGPGGGGSIERVRRKLLERGGA-GLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWDG-DKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDAVDVRARLWRQG 1941
            +GL ++ R+L+ MD  GD  LDR E + G    G+ L++ +++ + A+FD + +G +S +EF  G+ G L  RR   +  AF  +D  G G +  E++   Y  +E+PEVKSG K+  Q L +FL Q+D  D DG ++  EF +YYR +SASI++DDYFELMMRNAW +SGG  G C NT NRRVLV   D G + VEEI+          G+++  L ++G                +  S  +  L     +   R Q++                W   S    S   S  DR            GD+  P       G+    +++             R  P     + R+ +K+L RGG+ G++ L R + IMD+ GDK L + ELK GL+D GV  +  E++ +F   D+D+SG +S +EF  GLR P+S RR+D                    DL   YD S  P V+SG +T  + LREFL+Q+D  DKDG VT+ EF  YY+ +SA ID DDYFELM+RNAW LSGG  G C NT+N+RVL+  ++G + ++EI+        +  ++R RL ++G
Sbjct:   89 NGLSSVNRVLKRMDTSGDKALDRREFRDGFLALGLTLTSQDIEDLFAYFDKDKNGKISIEEFFVGLCGVLNDRRRKFVEIAFNRMDRDGSGEITFEDIENIYDVSENPEVKSGKKSPKQALKEFLQQFDQGDKDGIITEEEFLEYYRCLSASIENDDYFELMMRNAWHISGG-KGQCQNTTNRRVLVTHID-GTQTVEEIEDNLWVDKDSEGEMKRVLKKKGVNAVGKIDKHYSHEQSSPKSKSQFRLESRKSNFSQRIQKKSSVDRAINSTRDSKPAWGAVSKAKRSLRNSKYDRTEEYYFPQEMDLGDEAVP-------GSSQFDIISDSLKQKPSKTSLRRSEPP---IVGRMLKKVLARGGSNGIQTLGRVLRIMDDSGDKCLNRYELKNGLKDYGVEFSEEEINDMFDYLDKDQSGKVSFDEFLVGLRGPISKRRKDLILSAFRKLDRNKDGFVTIEDLEMTYDPSHIPEVKSGKLTKAEGLREFLSQFDTIDKDGIVTQEEFVEYYKNVSASIDTDDYFELMLRNAWHLSGG-QGQCKNTSNRRVLISHQNGKQTIQEIEDDLWLDYNNEDEMRHRLEKRG 662          
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: A0A7S1TUH5_9STRA (Hypothetical protein n=5 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUH5_9STRA)

HSP 1 Score: 316 bits (809), Expect = 2.380e-93
Identity = 262/730 (35.89%), Postives = 339/730 (46.44%), Query Frame = 1
Query:  280 VAKVRQRCVARGGGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIKGIAGQHARDAGDVRARLWRQGAALSDDEVELGGDIDARTQRQXXXXXXXXXXXXXXXG-------------------------W--EDPSPSP------SRSP--IDRGGD-------------------------------------------QRSPPLRRRSGGAQNHQ---------------VLAHRP------------------------------------------------------GPGGGGS--------------------------IERVRRKLLERGG--AGLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWDG-DKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDAVDVRARLWRQG 1941
            V +VR+  +ARGG +G+ ++ARLL+VMD+DG+G+L +TELK+GL+D G+ +S   L  +                FL G+RG +  RR  L+  A+  LD  G G V ++++R  Y  ++HP V  G+KT  +VLA+FL Q+D    DG V   EF DYYR +SAS+DDDDYFELMMRNAW +SGG +GWC NT N+RVLV  RD G + VEEIK   G    D    R RL RQ    +D  +EL G +D    R+              X                          W  E+PSP P      SR+P   D GGD                                           QR  P RRR GG++  Q               +L + P                                                      G   G                            +ERVR K+++R G   G++G+ RA+ +MD+ GD +L+KEE+K+GLQD G+ L ++ELD +                               XXXXXXXXXXXXXXXXXXXXD+   YD S HP V  G +T  +AL  FL Q+D  +KDG VT  EF  YY+ +SA IDGDD+FELMMRNAW +SGG  GWC NT+NKRVLV  RDG + VEE+K   G    D    R RL  QG
Sbjct:   85 VDRVREAILARGGSNGIRSVARLLKVMDDDGNGKLSKTELKYGLKDMGITVSDQNLVTLXXXXXXXXXXXXXXXXFLTGLRGDMSERRQGLVHMAYDKLDVTGDGIVTIDDIREAYDVSQHPGVLDGSKTPDEVLAEFLDQFDRHKKDGIVDVKEFMDYYRDISASVDDDDYFELMMRNAWHISGG-EGWCENTTNKRVLVTHRD-GRQTVEEIKDDLGVRPDDVDGYRERLRRQNIDAAD--MELYGGVDTTKGRKSRGGRPPARGSGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXWATEEPSPKPRAKPTRSRAPWEADDGGDDDDSFFDEIKEDKARPAPGPGGGXXXXXXXXXXXNPSSDRPAGQRQAP-RRRGGGSRATQSQLAETAEDPIKMFELLFYTPPCPFEELLDKLSASQIDLDPSISPSTLERMLSAADRSMSSMVAKQLAINIARALGVSAGAPLRIRDLYDALSQRFGRDSKSKRPTNIVERVRAKIIDRCGPQVGIKGVQRALKVMDDSGDGKLSKEEIKYGLQDYGIELNISELDQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIRHTYDVSQHPGVVDGTVTPDEALATFLEQFDTQEKDGIVTIEEFMDYYKNVSASIDGDDHFELMMRNAWHISGG-EGWCANTSNKRVLVTHRDGRQTVEEVKNDLGVRPGDVDGYRQRLRDQG 808          
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: A0A7S4DAT6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAT6_HETAK)

HSP 1 Score: 292 bits (748), Expect = 7.970e-85
Identity = 221/637 (34.69%), Postives = 323/637 (50.71%), Query Frame = 1
Query:  304 VARGGGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDG-DGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIKGIAGQHARDAGDVRARLWRQGAALSDDEVELGGDID-----------------------ARTQ---------------------------------------------RQXXXXXXXXXXXXXXXGW----EDPSPSPSRS--PIDRGG-------------DQRSPPLRRRSGGAQNHQVLAHRPGPGGGGS-IERVRRKLLERGGAGLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWD--GDKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDAVDVRARLWRQG 1941
            +A  G  G+  L R  R+MD+DG   L   E K  + +    L+ A+   +  HFD++  G + F+EF+ G+R PL  RR  L++ AF  LD+ G G++   E+   +  ++HPEV +G KT  +V ++FL  +D     DG+V+A EF++YY +V ASI  DDYFELMMRN W +SGG +GWC N++N RVLV   D G + VEE+K   G    +  ++  RL  QG A +   V + G +D                       ARTQ                                             +Q               G+    +  S +  +S  P ++G              D+     ++ S   Q  + LA   G G   + +  VR +L  RG  G+ G++R   IMD+D  K L+ +E K G+++  + L+  E+  +F  FDR++ G +  EEF  G++ P++ RR +    XXXXXXXXXXXXXXXX+L + YDA+ HP V SG  TA + L+EFL  +D  G+ DG +TE EFQ YY  +S+ ID DDYFELM+RNAW +SGG  G   N+AN+RVL+   DG+++V E++   G  A D   +   L  QG
Sbjct:  136 LASRGARGIIGLGRKFRIMDDDGSNSLSLLEFKKAMNEMSFNLNDADARLIFQHFDSDSSGCIDFEEFIQGIRDPLNERRLVLVQKAFQILDKDGNGAIEPAEIAQAFDASQHPEVIAGRKTPEEVYSEFLDTFDVGGAKDGKVTADEFQNYYTNVGASIQSDDYFELMMRNCWHISGG-EGWCENSSNLRVLVTHAD-GRQTVEELKDDLGVAPSNTNEILRRLKLQGVADAVG-VNVKGGVDSGNPEPDHTRSSTRLSSMGIAAGARTQDINDKVAGRKKTAVGASEFQSRVEIADSGRPAATLAEIAGAGYHRKQNVLGENPSLKSALGSGFVVAAQQKSNAQKKSVLPEEKGAFHSHLSVGFRVDEDENQDEEQQNSDYPQGPRSLAEIAGQGNVSTLVSLVRERLNRRGVRGIVGISRRFKIMDDDNSKSLSIDEFKKGMKECALDLSEREMQQLFQHFDRNQDGDLDYEEFLNGIKGPMNKRRLELVSLXXXXXXXXXXXXXXXXELMQKYDATQHPEVLSGKRTANEILQEFLDTFDVGGEVDGKITEKEFQNYYSNVSSSIDNDDYFELMIRNAWHISGG-QGQAANSANRRVLITNEDGSQQVVEVRNDLGISAGDKNAIAHNLQNQG 768          
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: A0A7S1NLK1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NLK1_9EUGL)

HSP 1 Score: 293 bits (751), Expect = 5.540e-84
Identity = 200/556 (35.97%), Postives = 272/556 (48.92%), Query Frame = 1
Query:  316 GGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIKGIAGQHARDAGDVRARLWRQGA------ALSDDEVELGGDID---ARTQRQXXXXXXXXXXXXXXXGWEDPSPSPSRSPIDRGGDQRSPPLRRRSGGAQNHQVLAHRPGPG-----GGGSIERVRRKLLERGGAGLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWDGDKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDAVDVRARLWRQG 1941
            G +G   +A + R +D+DG+ +L + EL  GL    + LS  E + + A+ D +  G +S  EFL   R  L  RR  L+R A+  LDE   G V + ++  +Y  + HP V  G      V  +F+  WD RDG   V+  +F DYY  + A I +DDYFELM+RNAW LSGG +GWC NT  RRVLV       + VEE+K   G   +D   +R  L  QG       +LSD         D   A+ ++                G     P      +    D   P     S  ++        P  G     G   I++VR+KL  RGG  +RGL  ++ +MD + +  L+KEE+K GLQ  G+ LT +EL  V   FDRD SG+IS+ EF RGLR P+  RR+D                    ++ + YD S HP V  G+    + L  F+  WD D D +VT  EF  YYE +S  I  D YFELM+RN W LSGG  G   NT+ +RVLV   DG + VEEIK   G   +D   +   L +QG
Sbjct:  181 GQNGFRNVAVMFRQIDSDGNSKLSKQELIRGLSKYQIHLSPTEANALMAYLDQDHSGHISLSEFLILSRPKLNERRKNLVRQAYQTLDENNDGIVTLRDIAEKYDSSGHPNVMKGTACARAVHLEFIQSWD-RDGKCYVTFEDFCDYYEDLGACISNDDYFELMVRNAWHLSGG-EGWCENTTCRRVLVTYMGDKKQTVEEVKNDLGIGPKDFEKMRENLMAQGITNIKQLSLSDGSYRTFSAKDDEAAQLRKNRGLERTIGMGRWLERGALGAGPRGGIGVVFLNNDGWQP----ESEYSEAFAGAGDMPSAGQFKLLGNPVIDKVRKKLFSRGGQSMRGLTLSIRVMDENKNGELSKEEMKKGLQRYGLELTDHELMEVLNFFDRDNSGSISITEFLRGLRGPMVNRRKDLVKQAYALLDTNSDGEATINEIGKLYDVSQHPQVLDGSKFPNEVLSSFIEAWDKDGDDNVTFEEFLDYYEDISCEIGNDTYFELMIRNTWHLSGG-EGQGANTSCRRVLVTHADGRQTVEEIKNDLGIGPKDMEKMMDNLAKQG 729          
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: A0A1V9ZS31_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS31_9STRA)

HSP 1 Score: 284 bits (727), Expect = 8.900e-81
Identity = 219/555 (39.46%), Postives = 291/555 (52.43%), Query Frame = 1
Query:  280 VAKVRQRCVARGGGD-GLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIKGIAGQHARDAGDVRARLWRQGAALSDDEV-ELGGDIDARTQRQXXXXXXXXXXXXXXX-------GWEDPSPSP------SRSPIDRGGDQRSPP-----LRRRSGGAQNHQVLAHRPGPGGGGSIERVRRKLLERGG-AGLRGLARAVAIMDND-GDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWDGDKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIK 1878
            +A+V+   V R G   G+H +AR +R +D + DGRL R EL++GLRD GV  +A ++D +                                               V + ++R  Y  ++HP V SG K    VLA F+ QWDT + DG V+ AEFE YY++VSASIDDD YFELMMRNAWR+ GG  G C N+AN+RVLV+  DG    VE       + A    D  A+      A +   + E    IDA   R                       G  D   S       +R+    G +    P        R G        A       G  +ER++ K++ RGG AG+  + R + + D++  D +LTK+ELK GL+  G+ + L+E+D +    D D SGA+S +E   GLR  L+ RR+  XXXXXXXXXXXXXXXXXXXDL   YD S HP V +G ++ ++AL +FL  WD D DG+V+  EF AYY  +SA IDGDDYFELMMRNAW +SGG  G C N++N+RVLV   DG + VEEIK
Sbjct:  293 LARVKAVLVGRSGDQAGIHTIARTMRALDANRDGRLSRDELRFGLRDFGVDCAAVDIDTIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTLADVRELYDVSKHPAVLSGEKAPDDVLAAFMEQWDTDENDGAVTLAEFEHYYQNVSASIDDDAYFELMMRNAWRIPGG-VGQCANSANKRVLVQDADGNQRVVEATSTPRTRSASGNADAFAQRLEDPLAYARHVLFEPPCTIDALAHRVGANRVLGSGQERVHLKAFATALGRRDKKLSARDALIIARALAVSGSEMIDIPGLHAQFTSRFGAPPRAMEGAT------GNVLERLKAKIITRGGSAGIHAVQRVMRLWDSERSDGKLTKDELKAGLESYGIEIHLHEVDQLMTLLDTDHSGAVSFDELLTGLRGQLNARRQALXXXXXXXXXXXXXXXXXXXDLRACYDVSRHPDVMAGRLSEREALVQFLGNWDRDGDGTVSPAEFAAYYAAVSASIDGDDYFELMMRNAWHISGG-TGQCANSSNQRVLVTHADGHQTVEEIK 839          
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: K3WWY2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWY2_GLOUD)

HSP 1 Score: 288 bits (737), Expect = 1.540e-80
Identity = 201/540 (37.22%), Postives = 273/540 (50.56%), Query Frame = 1
Query:  316 GGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEI-----KGIAGQHARDAG-DVRARLWRQGAALSDDEVELGGDIDARTQRQXXXXXXXXXXXXXXXGWEDPSPSPSRSPIDRGGDQRSPPLRRRSGGAQNHQVLAHRPGPGGGGSIERVRRKLLERGGAGLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVP-LTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWDGD--KDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDA 1908
            G  G  +L R  R+MD+D +G +  TE    L +  V L+ A+   +  +FDAN DG V F EFLAG+R P+  RR   +R AF  LD    G + V ++   Y   +HP+V SG KTE  V A+FL  +   D DG+++  E+  YY ++SASIDDDDYFELMMRNAW +SGG  GWC N+ANRR LV   DG A  VEE      +G AGQ    +  D+         +     V +    D+                    G    + +   +P      QR  P+          Q++           I +++  L  +G  G  GL+R   +MD+DG+  L   E +  ++D  +  LT  +L  +F  FDRDRSG+I L EF  G+R PL+ RR                      D+  AYDAS HP V SG  TA     EFL  +D D   +G +T  ++  YYE +SA ID DDYFELMMRNAW +SGG  GWC N+ N+RVLV   DG + V+E++   G   +DA
Sbjct:  568 GAVGFISLQRKFRLMDDDQNGSISVTEFHKALHETKVHLAPADATTLFQYFDANHDGAVDFHEFLAGIREPMSERRMLFVRMAFDILDTDSNGVLEVSDIVDVYDARKHPDVLSGRKTEHDVFAEFLDTFGDVDHDGKITFDEWTRYYANISASIDDDDYFELMMRNAWHISGG-HGWCANSANRRTLVNHADGRAT-VEEAQNATSRGPAGQRTSTSFCDILGYSNPAAKSAPSRRVSVANASDSFAACLTMVPTSKPPSAAAVPGATKAALAAQDTP------QRDHPV--------GVQLI-----------IAKLKNGLKAKGAHGFCGLSRKFRLMDDDGNGSLNVTEFRKAMKDMELQDLTDADLRLLFQYFDRDRSGSIDLNEFLVGVRDPLNERRVLFVREAFKRMDKDGNGLLEPSDIVEAYDASKHPDVLSGRKTADAVCCEFLETFDVDGIHNGKITWTQWLHYYENISASIDDDDYFELMMRNAWHISGG-IGWCANSTNRRVLVTLADGTDIVKEVQNDLGVPIQDA 1079          
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Match: A0A6U0WUQ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0WUQ8_9STRA)

HSP 1 Score: 262 bits (669), Expect = 6.440e-75
Identity = 201/561 (35.83%), Postives = 286/561 (50.98%), Query Frame = 1
Query:  316 GGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSVGVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFEDYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGGAERVEEIKGIAGQHARDAGDVRARLWRQGAALSDDEVELGG---DIDARTQRQXXXXXXXXXXXXXXXGWEDPSPSPSRSPIDRGGD----------QRSP-----PLRRRSGGAQNHQVLAHRPGPGGGGSIERVRRKLLERGGAGLRGLARAVAIMDNDGDKRLTKEELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVRRRDXXXXXXXXXXXXXXXXXXXXDLARAYDASWHPLVRSGAMTAQDALREFLAQWD-GDKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGAGWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDAVDVRARLWRQG 1941
            G   +  L +  R++D+ GDG LD+ E +  + +  + L+  ++D +  HFD +  G +++DEFL  +RG L  RR  ++  AF  +D+   G + ++++   Y  ++HP+V +G +T+ ++L +FL  +D  + DG+V   EF  YY +VSA IDDDDYFELM+RNAW + GG +GWC NTAN+RVLV   DG  +RVE I+   G    D   V+A+L  QG+  +       G   + +   +             XXXX      PS  R+P  R G+          +  P     P     G +++             G + R+++ L  RG  G+  L +   I+D+DG   L   E    L +  +     ++  +F                  G+R  LS RR       XXXXXXXXXXXXX  D+   YDA   P V+ G  T  + L EFL  +D GDKDG VT  EF  YY  +SA ID DDYFELM+RNAW + GG  GWC NTANKRVLV   DG + VE I    G    D   ++A+L  QG
Sbjct:   42 GAKNIAKLGKKFRIIDDSGDGNLDQAEFQKCMIEQRLDLTPEQIDALFMHFDEDKSGSITYDEFLVALRGKLNERREQMVLLAFDVIDKDKSGILDLDDITEAYDASKHPDVIAGKRTKQEILREFLDVFDGGEKDGQVFPNEFMRYYSNVSAYIDDDDYFELMIRNAWHIPGG-EGWCANTANKRVLVTDADGN-QRVECIQNDLGLDTNDPKAVQAQLDAQGSKGAYTPPSPSGPQKNKNPTAKLGGGSLGSAASLNXXXXXXXXXXPSKRRTPKSRLGESSISIFGSGVEYGPATDLTPEEESMGWSKDMPESTR-------GLLRRLKQSLRRRGTMGIAKLGKKFRIIDDDGSGTLDLAEFTKCLTEHRLGFDEAQIAEMFXXXXXXXXXXXXXXXXLVGIRGELSERRAQMVLMAXXXXXXXXXXXXXIDDIRMKYDAKSSPEVKQGKETEDEVLAEFLDVFDQGDKDGKVTPDEFSRYYSNVSASIDEDDYFELMIRNAWHIPGG-EGWCANTANKRVLVTHPDGRQTVECIHDDLGVDLSDPEVLKAKLASQG 592          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162326 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJU3_9STRA0.000e+0100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A2R5GMX4_9STRA2.300e-9837.32Calcium-dependent protein kinase n=1 Tax=Hondaea f... [more]
A0A6G0WBJ6_9STRA7.240e-9838.87Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S3PJB3_9STRA1.840e-9336.12Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S1TUH5_9STRA2.380e-9335.89Hypothetical protein n=5 Tax=Phaeomonas parva TaxI... [more]
A0A7S4DAT6_HETAK7.970e-8534.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1NLK1_9EUGL5.540e-8435.97Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A1V9ZS31_9STRA8.900e-8139.46Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
K3WWY2_GLOUD1.540e-8037.22Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6U0WUQ8_9STRA6.440e-7535.83Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:602822..608495 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|162326|e_gw1.20.135.1
DescriptionEF-hand domain pair
COG categoryT
Max annot lvl121069|Pythiales
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota,1MJ3N@121069|Pythiales
Evalue2.53e-81
Seed ortholog65071.PYU1_T009480
Hectar predicted targeting categoryother localisation
TranscriptId162648
TrackFilteredModels1
ProteinId162326
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162326gene_4112Tribonema minus UTEX_B_3156 geneContig_20 602822..608495 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162326Trimin1|162326|e_gw1.20.135.1Tribonema minus UTEX_B_3156 polypeptideContig_20 602822..608495 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4112_1exon_4112_1Tribonema minus UTEX_B_3156 exonContig_20 602822..603222 +
exon_4112_2exon_4112_2Tribonema minus UTEX_B_3156 exonContig_20 603522..603798 +
exon_4112_3exon_4112_3Tribonema minus UTEX_B_3156 exonContig_20 604101..604654 +
exon_4112_4exon_4112_4Tribonema minus UTEX_B_3156 exonContig_20 605721..605862 +
exon_4112_5exon_4112_5Tribonema minus UTEX_B_3156 exonContig_20 606381..606573 +
exon_4112_6exon_4112_6Tribonema minus UTEX_B_3156 exonContig_20 607812..607963 +
exon_4112_7exon_4112_7Tribonema minus UTEX_B_3156 exonContig_20 608274..608495 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4112CDS_4112Tribonema minus UTEX_B_3156 CDSContig_20 602822..603222 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4112 ID=mRNA_4112|Name=jgi.p|Trimin1|162326|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1941bp|location=Sequence derived from alignment at Contig_20:602822..608495+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCAAGGCCAGCGGCAGCAGGCCCAGCACCGCGGGCGCAGGGGGGGC
GCGCTTCAGGCGACCCCCGCCGCCCCCCAGTTACGCTTCGTCTGACGCGC
CAACGTACAGGACGCCGCGCGGCGGTTCCGAGTACGGCGGCGGCCGCTCC
GTAGCTGGCCGCGCAGCAGCAGTTGGGCGCGGCGGCGGCGGTGGCGGTGG
CGGCGGCGCGCGGGGCGCCGCCAGCGCCGCGCTGCGCCACGACGACGGCG
GCGCCGCGGCCGCCGCCGCCGCGGCGGTCGTGGCCAAGGTGCGGCAGCGC
TGCGTGGCGCGCGGCGGCGGCGACGGCCTGCACGCGCTCGCGCGGCTGCT
GCGCGTCATGGACAACGACGGCGACGGGCGCCTCGACCGCACGGAGCTCA
AGTGGGGGCTGCGCGACTGCGGCGTCGCGCTGAGCGCTGCCGAGCTGGAC
CGCGTGTGCGCGCACTTCGACGCGAACGGCGACGGTTTTGTGTCCTTCGA
CGAGTTCCTGGCGGGCATGCGCGGGCCGCTGGGTGCGCGCCGCGCGGCGC
TCATCCGCGACGCCTTCGCGGCGCTCGATGAACGAGGGCTGGGGTCCGTC
GGCGTTGAGGAGCTCAGGGGGCGGTACAGCTGCGCGGAGCACCCGGAGGT
GAAGAGCGGCGCCAAGACGGAGGCGCAGGTGCTGGCGCAGTTCCTGGCGC
AGTGGGACACGCGCGACGGCGACGGCCGCGTGAGCGCTGCCGAATTTGAA
GATTACTACAGGAGCGTCTCCGCGTCCATCGACGACGACGACTACTTCGA
GCTCATGATGCGCAACGCGTGGCGCCTGTCCGGCGGCGGCGACGGGTGGT
GCGGGAACACCGCTAATAGGCGCGTTCTGGTGCGCGGGCGCGACGGCGGC
GCGGAGCGCGTGGAGGAGATCAAGGGGATTGCAGGGCAGCACGCGCGCGA
CGCGGGGGACGTGCGCGCGCGCTTGTGGCGGCAGGGCGCCGCGCTGAGCG
ATGATGAAGTTGAACTTGGCGGCGACATCGACGCGCGGACGCAGCGGCAG
CAGCGGCAGCCGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGCACGGCTG
GGAGGACCCCTCACCCTCCCCTTCGCGCAGTCCCATAGACCGGGGCGGGG
ACCAGCGCAGCCCCCCTCTGCGCCGGCGCAGTGGCGGCGCGCAGAACCAT
CAAGTACTCGCTCACAGGCCAGGACCGGGGGGCGGCGGCAGCATCGAGCG
CGTGCGGCGCAAGCTGCTGGAGAGGGGGGGGGCGGGGCTGCGGGGGCTCG
CGCGCGCCGTCGCGATCATGGATAACGACGGGGACAAGAGGCTCACCAAG
GAGGAGCTCAAGTGGGGGCTGCAGGACGCGGGCGTGCCGCTGACGCTCAA
CGAGCTGGACGGCGTCTTTGCGTGCTTTGACCGCGACCGCAGCGGCGCCA
TCTCCCTGGAGGAGTTTGCACGGGGTCTGCGGCCGCCGCTCAGCGTGCGC
CGCCGCGACCTCATCCACGCGGCGTTTGCGACGCTCGACGCGGACGGCGA
CGGCGCCGTGACAGCAGGCGATCTCGCGCGCGCGTACGACGCGTCGTGGC
ACCCGCTTGTGCGCAGCGGCGCCATGACCGCGCAGGACGCGCTGCGCGAG
TTCCTGGCGCAGTGGGACGGCGACAAGGACGGGAGCGTCACCGAGCACGA
GTTCCAGGCGTACTACGAGACGCTCTCGGCGCTCATAGACGGCGACGACT
ACTTCGAGCTCATGATGCGCAACGCGTGGCGCCTGTCCGGCGGCGGCGCC
GGCTGGTGCGGGAACACCGCTAATAAGCGCGTTCTGGTACGTGGCCGCGA
CGGCGCGGAGCGCGTGGAGGAGATCAAGGGGATTGCAGGGCAGCACGCAC
GCGACGCGGTGGACGTGCGCGCGCGGCTGTGGCGGCAGGGC
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protein sequence of jgi.p|Trimin1|162326

>Trimin1|162326|e_gw1.20.135.1 ID=Trimin1|162326|e_gw1.20.135.1|Name=jgi.p|Trimin1|162326|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=647bp
MSKASGSRPSTAGAGGARFRRPPPPPSYASSDAPTYRTPRGGSEYGGGRS
VAGRAAAVGRGGGGGGGGGARGAASAALRHDDGGAAAAAAAAVVAKVRQR
CVARGGGDGLHALARLLRVMDNDGDGRLDRTELKWGLRDCGVALSAAELD
RVCAHFDANGDGFVSFDEFLAGMRGPLGARRAALIRDAFAALDERGLGSV
GVEELRGRYSCAEHPEVKSGAKTEAQVLAQFLAQWDTRDGDGRVSAAEFE
DYYRSVSASIDDDDYFELMMRNAWRLSGGGDGWCGNTANRRVLVRGRDGG
AERVEEIKGIAGQHARDAGDVRARLWRQGAALSDDEVELGGDIDARTQRQ
QRQPQQQQRRRQQQHGWEDPSPSPSRSPIDRGGDQRSPPLRRRSGGAQNH
QVLAHRPGPGGGGSIERVRRKLLERGGAGLRGLARAVAIMDNDGDKRLTK
EELKWGLQDAGVPLTLNELDGVFACFDRDRSGAISLEEFARGLRPPLSVR
RRDLIHAAFATLDADGDGAVTAGDLARAYDASWHPLVRSGAMTAQDALRE
FLAQWDGDKDGSVTEHEFQAYYETLSALIDGDDYFELMMRNAWRLSGGGA
GWCGNTANKRVLVRGRDGAERVEEIKGIAGQHARDAVDVRARLWRQG
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mRNA from alignment at Contig_20:602822..608495+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4112 ID=mRNA_4112|Name=jgi.p|Trimin1|162326|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5674bp|location=Sequence derived from alignment at Contig_20:602822..608495+ (Tribonema minus UTEX_B_3156 )
ATGAGCAAGGCCAGCGGCAGCAGGCCCAGCACCGCGGGCGCAGGGGGGGC GCGCTTCAGGCGACCCCCGCCGCCCCCCAGTTACGCTTCGTCTGACGCGC CAACGTACAGGACGCCGCGCGGCGGTTCCGAGTACGGCGGCGGCCGCTCC GTAGCTGGCCGCGCAGCAGCAGTTGGGCGCGGCGGCGGCGGTGGCGGTGG CGGCGGCGCGCGGGGCGCCGCCAGCGCCGCGCTGCGCCACGACGACGGCG GCGCCGCGGCCGCCGCCGCCGCGGCGGTCGTGGCCAAGGTGCGGCAGCGC TGCGTGGCGCGCGGCGGCGGCGACGGCCTGCACGCGCTCGCGCGGCTGCT GCGCGTCATGGACAACGACGGCGACGGGCGCCTCGACCGCACGGAGCTCA AGTGCGTCAAGTCGCGCAAGACTGTGTATGCAAAGTCTGGCACGCTCGGA ATCATCTGATCACCGCGCTTGCTCCCGCCCTGTGGCGGTTCCGCTGAGCG TGCGCTGTGGGCGACGCAGGACTGCCTCTGCAGATGCTTCTAGAAGTATG AGTCTACAATTAAAGCATTCCATGAGCCTACAATTAAAGCATTATCTTCT GTTTCCAGCAGTCTACCATACAAAGCAGCATTGTGCACAGCGCCTCTGTT GCGGGCGCTGCCGCGAACTCAACGCCGCCCACTTCAACCGTACCACGCAG GTGGGGGCTGCGCGACTGCGGCGTCGCGCTGAGCGCTGCCGAGCTGGACC GCGTGTGCGCGCACTTCGACGCGAACGGCGACGGTTTTGTGTCCTTCGAC GAGTTCCTGGCGGGCATGCGCGGGCCGCTGGGTGCGCGCCGCGCGGCGCT CATCCGCGACGCCTTCGCGGCGCTCGATGAACGAGGGCTGGGGTCCGTCG GCGTTGAGGAGCTCAGGGGGCGGTACAGCTGCGCGGAGCACCCGGAGGTG AAGAGCGGCGCCAAGACGGAGGCGCAGGTGAACGAGCGTCGGCGTTTGAA CTTGAATATGAAGTTGAAGTTGTGTTGATGCCCGCGGTACCAGCCACTCT GCGCGCGGTCAGTGTCTGCGTGATGGGGCAGGCCGTTGCCGACGGCGCAG GCGAGGTATGAGTTGAAGTTGGGGTGAGCCGGCCCGATGCACTGCGCTAG ATCCGGTACCCCCTTTGCCACGCATACATCCTCCGATCCATCTGGCTCGC ACTGGGGTGTCTGGCACACTTACACGCCAATTATACCCTGCACTGAGCAC GTCCCCCGCCGCCGCCACCGCCGCCGCAGGTGCTGGCGCAGTTCCTGGCG CAGTGGGACACGCGCGACGGCGACGGCCGCGTGAGCGCTGCCGAATTTGA AGATTACTACAGGAGCGTCTCCGCGTCCATCGACGACGACGACTACTTCG AGCTCATGATGCGCAACGCGTGGCGCCTGTCCGGCGGCGGCGACGGGTGG TGCGGGAACACCGCTAATAGGCGCGTTCTGGTGCGCGGGCGCGACGGCGG CGCGGAGCGCGTGGAGGAGATCAAGGGGATTGCAGGGCAGCACGCGCGCG ACGCGGGGGACGTGCGCGCGCGCTTGTGGCGGCAGGGCGCCGCGCTGAGC GATGATGAAGTTGAACTTGGCGGCGACATCGACGCGCGGACGCAGCGGCA GCAGCGGCAGCCGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGCACGGCT GGGAGGACCCCTCACCCTCCCCTTCGCGCAGTCCCATAGACCGGGGCGGG GACCAGCGCAGCCCCCCTCTGCGCCGGCGCAGTGGCGGCGCGCAGAACCA TCAAGTACTCGCTCACAGGCCAGGACCGGGGGGGTGGGCTGCTGCTGCTG CTGCTGCGGAGTTGAGCAGTGCTGTCGGTCGGCCGCGGGCCGCGTGGGGG GGGCCAGGCGATGGTAGAGGGGGGTTTAGGGGGGAGGCAGAGGAGTTTGG CGGTGAAGGCGAGGGGGGAGCGGGGGGAGGGGGGGAGGAGGATCCGTGGC AGGTGCTGCGGGCGCTGCTATACACGCCCCCTTGCACGCTGGAGGGGCTC ATCGGTGCACTGCAGGCCAACAAGGTGTGCGCGAGTACACTGTACTGTGG TGCATTTTTGTAATTGCACATGTGAACACTTGAAAGCTGCGGGCCCGCAA GCTTGAATGCTCCCAGCTTCATGTACTGAAATCAGCGGGGGGCAAGGCAG TCCGTACCATCGTGGCATCACACGCACCACACTTCCTACGGCTGTAACCA TTGCCCTAATCCTAACCCTAACCCCAAGTAGCTCCAGCCCAGATCTCCCC ATCGCTGTCGGTGTTGGCGGTCTTCAGTGCTCAGCCACCTCCACTCCACC CTCAGCACTGCTGATAGCAGCGTCATCACATGGTTCGCGACGCGCTGACC GGCGCTTCACTCAGCTAATACTCACCCAATCCCTTACCGTAACCCTGCGC CACGGCTGCGCTGCCTGCACCCCCCATTGACGGCGCAGATGTGCAAAGCT CCGATGGCGCCGGTCGCTCATGTGCGAAGCCCCGCTGGCGCCAGTCGCGG CGGTCGCGCAGAGGCTGGCGACGCTCCGCCCCGCGCTCTAAGACTAGCTC TACCCTTATTTGCCCCAATCCCTGACCGTAACCTTACCCTGCGCTGCGCC TCAAATGTTCACCTCCCCCCCGGCGCAGATGAGCGAGGCCCCCTCGGCGC CGGTCGCGGCAGTCGCGCAGCGCCTGGTGACGCTGCGCCCCGCGCTCGGG CGGCGCGCCGCGCACGCGCTCGCGCAGGCGTGCGCCGCCTCCGCCGCCGC CAAAACCATCGACATCGCGGCGCTGCACCGCACGTTTGCACAGCGATTCG GCCGCGCTCGCAGCGGCTGCGGCGGCGGTGATGGCGGCGGCGGCGGCAGC GGCGGCAGCATCGAGCGCGTGCGGCGCAAGCTGCTGGAGAGGGGGGGGGC GGGGCTGCGGGGGCTCGCGCGCGCCGTCGCGATCATGGATAACGACGGGG ACAAGAGGCTCACCAAGGAGGAGCTCAAGTGGGGGCTGCAGGTGCGTGTG CGTGCAGGGCAGCGCTCTGGCGTTGCGCCGGCGCGTGTGCGTTGTGCTAT CAGGCAAGCAGTGTGAGGGTTGGAAACAACACACACACACACACACACGC ACAAGCAAGGCACACTCGTGGCATTGCGCCGGCGCGTGGCGTTGTGCGGT CACGTGAGCCCTGCAGTAGCTGAACGTACACATGCACGCACGCGCAACAC CCACGCAGTCGCGCGTTGCTGATGCTCCCCCTTGCGACCGCCGCTGCAAT GCGTCGCAGGCTGCGGGCGTACCTGCCGTAATCGGCAACGTCCTGGCGTG CTGCGGGCGCGCAACAACGCCTTGTGACACTTCACAGCAACCCCCCACCC CATTTCTCATTGGCAACTCCAACTCGCTTGTTCCTACACAATTCCTCTTT CAAGCAAGTACATTCTCACCGATGCCCCTTCTCCGACCCCAAAACCCTAG ACCCCTAACCCTGTCCCTAACCCTAAAACGAACCCTAACCCTAACCCTAC CCCTCGCAGGACGCGGGCGTGCCGCTGACGCTCAACGAGCTGGACGGCGT CTTTGCGTGCTTTGACCGCGACCGCAGCGGCGCCATCTCCCTGGAGGAGT TTGCACGGGGTCTGCGGCCGCCGCTCAGCGTGCGCCGCCGCGACCTCATC CACGCGGCGTTTGCGACGCTCGACGCGGACGGCGACGGCGCCGTGACAGC AGGTGCGCGCTCGAGTTCGACGATGAGCGCCACGATCACGTGAGCAGATC AGAGTTAGGGGCGGGGTTAGGGGTAGGGTTAGGTCTGCAGCCGCCGCTCA GCGCGCGCCGCCGCGACCTCATCCGCGCTGCGTTCGCGGCGCTCGACGCC GACGGCGACGGTAATGTAACAGCAGGTGAGCTTGCGTCGCGCATCGACCT GCAATGGCTGCCGCAATGGCATGGGCACATCGGGGCTTGGGGTCAAGCCC TCGGCCCTGCCCCTGCCGCTGACCCTGCCGCTGACCCAATCTGCTGATAT ACCTCGAAGTACTTGATGTATGAGCGCGCCGTTGCGACTCATACGCGTGG CATTTGCAGCACTCGACGCGAACGACGACGGCGCCGTGACAGCAGGTGCG CGCGCCTCTGGGTCCGAGCTTGCGTCGAAATGAGTGCCGTGACCGCGTGA GCACATCGGGGTTCGGGTCAGGGTTAGGGGTAGGGCTGAGGTTATGGTTA GGGTTAGGCTGAGGGCAAACCCTCGACCCTGCCACTGACCCTGTCCCCAA TCTCAACCACTGATGTATGGTTGCGCGTTGTTTCGCGGCGCTAGACGCGG ACAGCGGCGCACCGTCACAGCACGTCAGGCCCGTGCGTTACATACACTAC CACTTTCAGATCAGCGCTTTCTGGATACAGTCTCACGACGGGTTCAACAT GGCAGGCCGGGCCTGAGCGCCGTGCACACCCCGCTCTGAAGTGCATATCT GCACCACAGCGCGCACCGTGTGCATCATGCAGAGTGCATGCTCCGGTCTC ACTTCTGCGCGTGATCCCATCGCGCCGCTGTGTGGGCGGCATACCATCAG TAGGTATGCGCGTTTGCAACTTGCGTATCAACAGCTGCACACGACACCGC AGCTGTGCGCGTGAGGAGCGCGCTGCAGGCCCGTCCATCGCGCGCAAGGC GCCGCCGCCACGATGCGCCACGATGCGCTCACGCCCTCACGCAAAACCCC AGTCCTCAATGGTATGCGCAGGGGGCCCCGCGCGTGTGCCTGCGGCACGC GCTTCAACCCTAACGCTAACCCTACAGTCATGACCTCCGGCCCCAACCCT TCAAGCTCCGCGCAGGAAAGCTCTCGCACACGCATGACACGTGCATCACC CCATGTACTTGGCATCCTAACCTCCAGACCAAACCTCAAGTCTCAACCGC CCCCCCCCCCCCCCCCCCTTATTCTTCACCGCCGACGCAGGCGATCTCGC GCGCGCGTACGACGCGTCGTGGCACCCGCTTGTGCGCAGCGGCGCCATGA CCGCGCAGGACGCGCTGCGCGAGTTCCTGGCGCAGTGGGACGGCGACAAG GACGGGAGCGTCACCGAGCACGAGTTCCAGGCGTACTACGAGGTGCAACT TGAAGTCGAAGTTGCTGCCCGCAGAATCTCGCTGCGCAGGGAGGGGGGTT ATGGGGAGGATGGTTGCTGAGCGCAACTGCTCGCAGTCCACGAGGCGACT TGGTCCGGGAATAGCCAGGCTTGAACTTGCACGCAGCGCACGCCAAGGGG GTAGGTAGCCTCGCTTGCACACCTGATGTATGCACTTGCAGCAGACAGAA GCGCCGCATCCGTCAACCAATACTTCGAAGTATGCGCTCACTGTCTCCCC AACTTCAACTCCTTCCATTCTCTCAACTTCACGCCGCCGATTGCTGCTGC AGACGCTCTCGGCGCTCATAGACGGCGACGACTACTTCGAGCTCATGATG CGCAACGCGTGGCGCCTGTCCGGCGGCGGCGCCGGCTGGTGCGGGAACAC CGCTAATAAGCGCGTTCTGGTACGTGGCCGCGACGGCGCGGAGCGCGTGG AGGAGATCAAGGGGATTGCAGGGCAGCACGCACGCGACGCGGTGGACGTG CGCGCGCGGCTGTGGCGGCAGGGC
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Coding sequence (CDS) from alignment at Contig_20:602822..608495+

>mRNA_4112 ID=mRNA_4112|Name=jgi.p|Trimin1|162326|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1941bp|location=Sequence derived from alignment at Contig_20:602822..608495+ (Tribonema minus UTEX_B_3156 )
ATGAGCAAGGCCAGCGGCAGCAGGCCCAGCACCGCGGGCGCAGGGGGGGC
GCGCTTCAGGCGACCCCCGCCGCCCCCCAGTTACGCTTCGTCTGACGCGC
CAACGTACAGGACGCCGCGCGGCGGTTCCGAGTACGGCGGCGGCCGCTCC
GTAGCTGGCCGCGCAGCAGCAGTTGGGCGCGGCGGCGGCGGTGGCGGTGG
CGGCGGCGCGCGGGGCGCCGCCAGCGCCGCGCTGCGCCACGACGACGGCG
GCGCCGCGGCCGCCGCCGCCGCGGCGGTCGTGGCCAAGGTGCGGCAGCGC
TGCGTGGCGCGCGGCGGCGGCGACGGCCTGCACGCGCTCGCGCGGCTGCT
GCGCGTCATGGACAACGACGGCGACGGGCGCCTCGACCGCACGGAGCTCA
AGTGGGGGCTGCGCGACTGCGGCGTCGCGCTGAGCGCTGCCGAGCTGGAC
CGCGTGTGCGCGCACTTCGACGCGAACGGCGACGGTTTTGTGTCCTTCGA
CGAGTTCCTGGCGGGCATGCGCGGGCCGCTGGGTGCGCGCCGCGCGGCGC
TCATCCGCGACGCCTTCGCGGCGCTCGATGAACGAGGGCTGGGGTCCGTC
GGCGTTGAGGAGCTCAGGGGGCGGTACAGCTGCGCGGAGCACCCGGAGGT
GAAGAGCGGCGCCAAGACGGAGGCGCAGGTGCTGGCGCAGTTCCTGGCGC
AGTGGGACACGCGCGACGGCGACGGCCGCGTGAGCGCTGCCGAATTTGAA
GATTACTACAGGAGCGTCTCCGCGTCCATCGACGACGACGACTACTTCGA
GCTCATGATGCGCAACGCGTGGCGCCTGTCCGGCGGCGGCGACGGGTGGT
GCGGGAACACCGCTAATAGGCGCGTTCTGGTGCGCGGGCGCGACGGCGGC
GCGGAGCGCGTGGAGGAGATCAAGGGGATTGCAGGGCAGCACGCGCGCGA
CGCGGGGGACGTGCGCGCGCGCTTGTGGCGGCAGGGCGCCGCGCTGAGCG
ATGATGAAGTTGAACTTGGCGGCGACATCGACGCGCGGACGCAGCGGCAG
CAGCGGCAGCCGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGCACGGCTG
GGAGGACCCCTCACCCTCCCCTTCGCGCAGTCCCATAGACCGGGGCGGGG
ACCAGCGCAGCCCCCCTCTGCGCCGGCGCAGTGGCGGCGCGCAGAACCAT
CAAGTACTCGCTCACAGGCCAGGACCGGGGGGCGGCGGCAGCATCGAGCG
CGTGCGGCGCAAGCTGCTGGAGAGGGGGGGGGCGGGGCTGCGGGGGCTCG
CGCGCGCCGTCGCGATCATGGATAACGACGGGGACAAGAGGCTCACCAAG
GAGGAGCTCAAGTGGGGGCTGCAGGACGCGGGCGTGCCGCTGACGCTCAA
CGAGCTGGACGGCGTCTTTGCGTGCTTTGACCGCGACCGCAGCGGCGCCA
TCTCCCTGGAGGAGTTTGCACGGGGTCTGCGGCCGCCGCTCAGCGTGCGC
CGCCGCGACCTCATCCACGCGGCGTTTGCGACGCTCGACGCGGACGGCGA
CGGCGCCGTGACAGCAGGCGATCTCGCGCGCGCGTACGACGCGTCGTGGC
ACCCGCTTGTGCGCAGCGGCGCCATGACCGCGCAGGACGCGCTGCGCGAG
TTCCTGGCGCAGTGGGACGGCGACAAGGACGGGAGCGTCACCGAGCACGA
GTTCCAGGCGTACTACGAGACGCTCTCGGCGCTCATAGACGGCGACGACT
ACTTCGAGCTCATGATGCGCAACGCGTGGCGCCTGTCCGGCGGCGGCGCC
GGCTGGTGCGGGAACACCGCTAATAAGCGCGTTCTGGTACGTGGCCGCGA
CGGCGCGGAGCGCGTGGAGGAGATCAAGGGGATTGCAGGGCAGCACGCAC
GCGACGCGGTGGACGTGCGCGCGCGGCTGTGGCGGCAGGGC
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