mRNA_4084 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: A0A835Z4N8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N8_9STRA) HSP 1 Score: 1426 bits (3691), Expect = 0.000e+0 Identity = 894/894 (100.00%), Postives = 894/894 (100.00%), Query Frame = 1
Query: 1 MPPPAAVLAEAAIIGDVVLPHAKKKRGRPVGSKEVPVPVTLKPQRRRTQTSRYSEDEYSNEQEGYSNEQVQQARANSRVDEYSNEQVRLMXXXXXXXXXVQFHAPVNAYTVPEAPTYRPTVAQFADPLAYIETIREEAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGIAKIIPPQGWSPPPPRPVEGKRFPTKEQAIHTLSQGLDYEDGKDYTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQXXXXXXXXXXXXXXFKAMAHKFAADWSAKHGLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQNSGSAPARLPTPAEIAHMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRALDFAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPEHTLQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLERGAPMPPAELHRFWGQFDPEGECMRRGGGGTAPARACGRLAAAALAQCGTPLLLLLLRGARVRTSKGAGAGRSSTVGRLLSNAAADRVWNRSVGVTRSSAERCRNGARAWRGRRPGRQQDERTP 2682
MPPPAAVLAEAAIIGDVVLPHAKKKRGRPVGSKEVPVPVTLKPQRRRTQTSRYSEDEYSNEQEGYSNEQVQQARANSRVDEYSNEQVRLMXXXXXXXXXVQFHAPVNAYTVPEAPTYRPTVAQFADPLAYIETIREEAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGIAKIIPPQGWSPPPPRPVEGKRFPTKEQAIHTLSQGLDYEDGKDYTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQXXXXXXXXXXXXXXFKAMAHKFAADWSAKHGLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQNSGSAPARLPTPAEIAHMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRALDFAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPEHTLQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLERGAPMPPAELHRFWGQFDPEGECMRRGGGGTAPARACGRLAAAALAQCGTPLLLLLLRGARVRTSKGAGAGRSSTVGRLLSNAAADRVWNRSVGVTRSSAERCRNGARAWRGRRPGRQQDERTP
Sbjct: 1 MPPPAAVLAEAAIIGDVVLPHAKKKRGRPVGSKEVPVPVTLKPQRRRTQTSRYSEDEYSNEQEGYSNEQVQQARANSRVDEYSNEQVRLMXXXXXXXXXVQFHAPVNAYTVPEAPTYRPTVAQFADPLAYIETIREEAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGIAKIIPPQGWSPPPPRPVEGKRFPTKEQAIHTLSQGLDYEDGKDYTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQXXXXXXXXXXXXXXFKAMAHKFAADWSAKHGLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQNSGSAPARLPTPAEIAHMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRALDFAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPEHTLQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLERGAPMPPAELHRFWGQFDPEGECMRRGGGGTAPARACGRLAAAALAQCGTPLLLLLLRGARVRTSKGAGAGRSSTVGRLLSNAAADRVWNRSVGVTRSSAERCRNGARAWRGRRPGRQQDERTP 894
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: D8LFA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFA3_ECTSI) HSP 1 Score: 399 bits (1025), Expect = 1.750e-119 Identity = 244/672 (36.31%), Postives = 322/672 (47.92%), Query Frame = 1
Query: 313 PVNAYTVPEAPTYRPTVAQFADPLAYIETIREEAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGIAKIIPPQGWSPPPP--RPVEGKRFPTKEQAIHTLSQGLD-YEDGKDYTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQXXXXXXXXXXXXXXFKAMAHKFAADWSAKHGLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQNSGSAPARLPTPAEIAHMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRALDFAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPEHTLQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGA-GVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLERG 2316
PV A ++P+APT+ PT QF DPL YIE+IR A+ +GIAKI+PP GW PPP RP K PTK+QA+H+L + Y+DG DYT+ +K MA + A W A+ + + A++ ++ +E EYW +VD G VEY ND++++ FWSGFP PP M ++ + + DF +YY GWNL NLPFW GSVLR+FR I G+ PWLY+GMQ+ TFAWHNEDNYLYS+NY+H GAPK WYGVPG ++ FE + L +E+ E LY IT M++P L++A+V V R Q G FVVTFPKAYHGGFS G+N GE AVNFA+PDW+ + ES E YR +SR + S+D+M L MYLP+H ++ C+ V+ E+RR+ EEL RA L GV DP GV L +FRL D+ + ++D+RR+C CKHT FM+ V C CS V+CLR CD G + L W + D+LN V E Y+ L G
Sbjct: 363 PVEA-SIPDAPTFYPTEEQFRDPLTYIESIRPTAES---------------------------------------FGIAKIVPPVGWDPPPTPLRPHSRKLVPTKKQALHSLMNSDEVYDDGADYTVVD---------------------------------------------YKVMADRVAEKWRARDPPAQKPRAAPLYEPMGPNVEVRPGA------------SKEEREAKMEENGKLRLLEREYWNVVDGGVEELEVEYANDLNISTFWSGFPMPPKNFMDGSSFDRT-KPCDFDDPEYYRTCGWNLNNLPFWPGSVLRFFRTHINGLTAPWLYLGMQYATFAWHNEDNYLYSLNYHHSGAPKQWYGVPGSCSKGFEKCLAKIL-----------------------GEPLENVAEHLYRITKMLSPVYLQQAQVPVCRLQQHPGQFVVTFPKAYHGGFSYGFNCGE------------------------AVNFAVPDWISYSRESTEAYRSASRMAALSHDKMVATLTMYLPDHDVKGCELVVRELRRIHQEELEHRARLEMKGVQDPALQGVPLPRFRLGYIDKDTEEYDERRVCKNCKHTLFMTGVACPCSDVDVSCLRCAEESCDCPVAGK---YLLSWWTEDDLNRFVRTAETYLRKLADG 886
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: A0A7S0G863_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G863_9STRA) HSP 1 Score: 355 bits (911), Expect = 2.550e-106 Identity = 213/585 (36.41%), Postives = 294/585 (50.26%), Query Frame = 1
Query: 538 YGIAKIIPPQGWSPPPPRPVEG-KRFPTKEQAIHTLSQGLDYEDGKDYTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQXXXXXXXXXXXXXXFKAMAHKFAADWSAKHGLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQNSGSAP-ARLPTPAEIAHMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRA-LDFA----HKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPG--VQARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPEHTLQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADEL 2265
YGI KI+PP+GW PP ++ K F TK+Q +H + +G+ ++DG+DYT A ++ MA + + W H P++S A + TP ++E +YW +V+ +VEYGNDID E+WSGFP + + A L F ++Y +S WNL N+P GS+LR + I G+NVPWLY G F+TF WHNEDNYLYSINY+H G+PK WYGVPG +A E+ + +L + M+D+P+LL++ITTM +P LL++ V + Q+AG FVVTFP+A+HGGFS G N+GE AVNFA PDW+ G E+NERYR +R +VFS+DR+ LA YL EHTL SC+ ++ E+ R+ +EEL LR L GV D ++L K RL DE SA +DD+R+CH CKH CF SAV C CSQ++V+CLRH +C P + ++W +A EL
Sbjct: 83 YGICKIVPPKGWDPPFCVDMKSSKEFQTKKQMLHRIQEGISFDDGEDYTPAE---------------------------------------------YEKMASEMSMKWKNAH---------------YSEDIYDPPQTSQTKAVEKKPRHSAVASDIKRMTPE---NLERDYWDIVETNSCSHSVEYGNDIDTIEYWSGFPLSKRGRCLNPKADGPSEADLQFTPTYGSDEFYRESWWNLNNMPCCPGSILRHVKVGINGINVPWLYFGSLFSTFCWHNEDNYLYSINYHHNGSPKQWYGVPGGRKEAEGLESVFKNNLAMK-----------------------MKDEPDLLHHITTMFSPELLQQGGVPACKILQNAGEFVVTFPRAFHGGFSMGPNVGE------------------------AVNFATPDWICHGAEANERYRAIARPAVFSHDRLTSTLANYLEEHTLASCRMLVKELERVIEEELRLRDRLFRAGVRDVSDDIKLPKNRLDQLDEESADYDDKRLCHSCKHVCFFSAVACECSQSKVSCLRHSHQLCSCP---PDSKYMMIWSTAHEL 554
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: A0A7S2XRB0_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRB0_9STRA) HSP 1 Score: 348 bits (894), Expect = 1.240e-102 Identity = 216/600 (36.00%), Postives = 292/600 (48.67%), Query Frame = 1
Query: 538 YGIAKIIPPQGWSPP-PPRPVEGKRFPTKEQAIHTLSQGLDYEDGKDYTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQXXXXXXXXXXXXXXFKAMAHKFAADWSAKHGLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQNSGSAPARLPTPAEIAHMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAA--GEWAGRALD-FAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQ--ARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPEHT-LQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLERG 2316
YGI KI+PP+GW+PP P K+F TKEQ IH L +G+ + DG+DYT A ++ M+ K + +W K+ + L TP ++E +YW +V+ R VEYGND+D EF SGFPA + E G F D+Y ++GWNL N+P S+LR R I G+NVPWLY G F+TF WHNEDNYLYSINY+H+GAPK WYGVPG + A E + +L + M D P+LL++ITTM +P LL++A V V Q+ G FVVTFP+A+HGGFS G N+GE AVNFA DW+ G +++ERYR +R +VFS+DR+ F +A +L E ++CK + E+ R+ +EEL LRA L GV D + L RL DE SA +DD+R+CH CKH CF SAV C CSQ++V+CLRH +C R + ++W + E+N D +R+ LE G
Sbjct: 85 YGICKIVPPKGWNPPFCIDPTSTKKFETKEQQIHRLQEGVSFGDGEDYTAAD---------------------------------------------YQEMSVKRSQEWCDKY------YSEPKVVQPEVTSHPNDVLPSESDTVTVVEETESKIDRNLMTPK---NLERDYWDIVETPVHRVVVEYGNDVDTTEFGSGFPASERGRCINGKINPEKVGEPEPKFGTADFYKETGWNLKNIPCSPDSILRHVRVGINGINVPWLYFGCLFSTFCWHNEDNYLYSINYHHKGAPKQWYGVPGTKKDAAGVEKVFKNYLSMK-----------------------MRDMPDLLHHITTMFSPRLLQKADVPVYSLLQNPGEFVVTFPRAFHGGFSMGPNVGE------------------------AVNFATHDWIAHGADASERYRSFARPAVFSHDRLTFTMANHLKEQKKFETCKLLAAELERVINEELRLRAKLIKSGVRDVSEQIDLPHNRLDQLDEESADYDDKRLCHACKHVCFFSAVACECSQSKVSCLRHSHYMCRCPT---ERKYLMIWSNDSEMNKTRDEVKRFCEHLEEG 580
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: A0A7S2ESI0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ESI0_TRICV) HSP 1 Score: 337 bits (864), Expect = 2.120e-98 Identity = 211/600 (35.17%), Postives = 292/600 (48.67%), Query Frame = 1
Query: 538 YGIAKIIPPQGWSPPPPRPVEG-KRFPTKEQAIHTLSQGLDYEDGKDYTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQXXXXXXXXXXXXXXFKAMAHKFAADWSAKHGLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQNSGSAPARLPTPAEIAHMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRAL---DFAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQ--ARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPEHTLQS-CKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLERG 2316
+GI KI+PP GW+PP ++ K+F TKEQ +H L +G+ + DG+DYT A + MA A W K G ++S S + TP H+E YW +V+ VEYGND+D +++ SGFP V E L +F D+Y ++ WNL N+P S+LR + I G+NVPW+Y G F+TF WHNEDNY+YSINY+H GAPK WYGVPG + A E + +L + M D P+LL++ITTM +P LL++ V V + Q+AG FVVTFP+A+HGGFS G N GE AVNFA DW+ G ++NERYR +R SVFS+DR+ F +A ++ E S C+ +L E++R+ +EE+ LR L + GV D + L + RL DE SA +DD+R+CH CKH CF S V C CSQ++V+CLRH +C R + ++W + E+NG ++ T R ASL G
Sbjct: 97 FGICKIVPPPGWNPPFCIDMKSTKKFQTKEQLLHRLQEGISFGDGEDYTAAE---------------------------------------------YVKMARDEATKWREKFGYHHTAYNENGTEGNRGECPNTK-------------KDSASEFTKRMTPE---HLEQHYWDIVETNSSDFAVEYGNDVDSDKYGSGFPLSERGRSVNGTIEVEKTDLPEPEFGTTDFYKETWWNLNNIPCAPESILRHIKVGINGINVPWVYFGCLFSTFCWHNEDNYMYSINYHHWGAPKQWYGVPGTRKDAEGLERVFKNYLSMK-----------------------MRDVPDLLHHITTMFSPRLLQQGGVPVYKIIQNAGEFVVTFPRAFHGGFSYGPNCGE------------------------AVNFATHDWIAHGADANERYRSFARPSVFSHDRLTFTMANHIKEQKRHSTCRLLLDELQRVVEEEIRLRNKLFDAGVRDVSGDINLPRNRLDKLDEESADYDDKRLCHACKHVCFFSCVACECSQSKVSCLRHSHYMCRCPT---ERKYMMIWSTEAEMNGTLE-TVRNFASLLLG 584
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: A0A1Z5JXE4_FISSO (Histone demethylase JARID1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXE4_FISSO) HSP 1 Score: 333 bits (853), Expect = 1.580e-97 Identity = 182/435 (41.84%), Postives = 245/435 (56.32%), Query Frame = 1
Query: 1033 HMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRALD---FAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQ--ARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPE-HTLQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLERGA 2319
++E +YW +V+ VEYGND+D ++F SGFP V L F +DYY ++ WNL N+P GSVLR+ + I GVN PW+Y G FTTF WHNEDNY+YSINY+H+GAPK WYGVPG + A E + +L + M DDP+LL++ITTM +P LL+ A V VS+ Q G FVVTFP+A+H GFS G N+GE AVNFA PDW+ +G E+NERYR R +VFS DR+ F +A +L + + +C+ +L E+ R+ +EEL LR L++DGV D + L + L DE SA +DDRR+CH CKH CF SAV C CSQ++V+CLRH +C R +F+LW S +EL ++ + SL+ A
Sbjct: 174 NLERDYWDVVETHTKEVAVEYGNDVDTHDFGSGFPLSERGRSVHGTRNAEKMHLPEPKFGTEDYYKETWWNLNNIPSAPGSVLRYVKVGINGVNCPWMYFGSLFTTFCWHNEDNYMYSINYHHKGAPKQWYGVPGEKKAAEGLERVFKNYLSMK-----------------------MRDDPDLLHHITTMFSPRLLQHADVVVSKLLQYEGEFVVTFPRAFHSGFSLGPNVGE------------------------AVNFATPDWISYGSEANERYRSFRRPAVFSQDRLTFTMANHLEDVKSYSTCRRLLNELERVVEEELRLRKKLSDDGVRDVSDVIALPRNSLDQLDEKSASYDDRRLCHFCKHVCFSSAVACQCSQSKVSCLRHSHFMCRCPT---ERKYFMLWTSNEELKSTLEKVRAHCESLKTSA 558
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: B7G887_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G887_PHATC) HSP 1 Score: 325 bits (834), Expect = 1.110e-94 Identity = 178/423 (42.08%), Postives = 237/423 (56.03%), Query Frame = 1
Query: 1033 HMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRALD---FAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQ---ARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPEHTLQS-CKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVD 2280
++E +YW +V+ TV+YGND+D EF SGFP V + L F +DYY ++ WNL N+P SVLR + I G+NVPW+Y G FTTF WHNEDNYLYSINYNH GAPK+WYGVPG A E + L + M D P+LL++ITTM +P LL+ A V V + Q G F++TFP+A+HGGFS G N+GE AVNFA DW+ +G ++NERYR +R +VFS+DR+ F +A +L E S CK +L E++R+ +EEL LRA L +GV D + L K RL DE SA +DD+R+CH CKH CF SAV C CSQ++V+CLRH +C R +F++W +EL ++
Sbjct: 176 NLERDYWDIVETHTRPVTVDYGNDVDTEEFGSGFPLSQRGRSVYGTKKLEKMDLPEPTFGSEDYYKETWWNLNNIPCAPDSVLRHVKVGINGINVPWMYYGSLFTTFCWHNEDNYLYSINYNHRGAPKLWYGVPGQSKQTADGLEKVFKSFLSMK-----------------------MRDVPDLLHHITTMFSPRLLQNALVPVYKLLQHEGEFIITFPRAFHGGFSLGPNVGE------------------------AVNFATHDWIAYGSDANERYRSFARPAVFSHDRLTFTMANHLQEQKAYSTCKLLLIELKRVVEEELRLRAKLLGEGVRDVSKIISLPKNRLDQLDENSANYDDKRLCHGCKHVCFFSAVACECSQSKVSCLRHSHYMCRCAT---ERKYFMIWSDDEELKSTME 548
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: B8BTH4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTH4_THAPS) HSP 1 Score: 325 bits (834), Expect = 1.440e-93 Identity = 220/691 (31.84%), Postives = 317/691 (45.88%), Query Frame = 1
Query: 328 TVPEAPTYRPTVAQFA-DPLAYIETIREEAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGIAKIIPPQGWSPPPPRPVE-GKRFPTKEQAIHTLSQGLDYEDGKDYTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQXXXXXXXXXXXXXXFKAMAHKFAADWSAKHG-LSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQNSGSA------PARLPTPAEIAHMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFP---------APPPQHMVA---------AAGEWAGRALDFAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQARS--FETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPE-HTLQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLE 2310
++P PT+ PTV F+ DPL YIE IR A++ YGI KI+PP+GW+PP ++ +RF TK+Q+IH L +G+ + DG +YT+ A A +++ +G + P N+ P + TP +E +YW +V+ V+YGND+D ++F SGFP +P Q MV A + + DF ++YY ++ WNL N+P + SVLR + I G+NVPWLY G F+TF WHNEDNY+YSINY+H GAPK WYGVPG + S E + +L + + D P+L+++ITT +P +L++ VSV + Q+AG F+VTFP+A+HGG++ G N GE AVNFA+ DW+ ++NERYR +R SVFS+DR+ + +A + + T + C A+ E+RRL EEL LR+ L GV D V L RL DE SA +DD+R+CH CKH CF SAV C CS+++V+CLRH +C R + L+W DE+ ++ E+ LE
Sbjct: 52 SIPFGPTFYPTVEDFSGDPLIYIEKIRCIAER---------------------------------------YGICKIVPPEGWNPPFALNIDCPERFSTKDQSIHRLQEGISFGDGDEYTVKEYQKMASEWSKEWRNSHYIVPGDEGKKSPSPPP--------------SAAAELDQNNYTGMNGNMPVPSSGGVVAAADATTTTADNAKINPMGNVSSNPNNTAPTTETEFKPKTIMTPE---CLERDYWEIVEGQCHEIDVDYGNDVDTSDFGSGFPISKRGRSVNSPNFQTMVNDDDNKNNTNTADDESIPEPDFGTEEYYRETYWNLNNIPNSKNSVLRHVKVGINGINVPWLYFGCMFSTFCWHNEDNYMYSINYHHRGAPKQWYGVPGTKYDSDGVERVFKNYLSMK-----------------------LRDVPDLIHHITTSFSPRILKQEGVSVCKLLQNAGEFIVTFPRAFHGGYNLGPNCGE------------------------AVNFALHDWIPHAVDANERYRTFARPSVFSHDRLVYTMAHHTKDLRTKEICNALSLELRRLMGEELLLRSKLIKSGVRDVSKDVELPANRLDQLDEDSADYDDKRLCHSCKHICFFSAVACECSESKVSCLRHSHYMCRCSIK---RKYILIWTPEDEMRKTIERVEKRGNELE 636
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: K0RUL2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUL2_THAOC) HSP 1 Score: 321 bits (823), Expect = 7.500e-93 Identity = 231/709 (32.58%), Postives = 319/709 (44.99%), Query Frame = 1
Query: 319 NAYTVPEAPTYRPTVAQFA-DPLAYIETIREEAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGIAKIIPPQGWSPPPPRPVEG-KRFPTKEQAIHTLSQGLDYEDGKDYTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQXXXXXXXXXXXXXXFKAMAHKFAADWSAKH------------------GLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQNSGSAPARLPTPAE-----IAH----------MELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRALD-------FAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQ--ARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPE-HTLQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLE 2310
N +P P + P+V +F+ DPL YIE IR A+K YGI KI+PP GW PP V+ K F TK+Q+IH L +G+ + DGKDYTI ++ M ++ +W AK+ G + XXXXXXXXX PQ+S + A+ +AH +E EYW +V+ V+YGND+D + F S FP V ++ + ++ F DYY ++ WNL N+P SVLR + + G+NVPWLY G F+TF WHNEDNY+YSINY+H+GAPK WYGVPG + A E + L + M D P+LL++ITT +P LL+ V V + Q G FV+TFP+A+HGGFS G N+GE AVNFA+ DW+ +NERYR R SVFS+DR+ + +A + E T + C ++ E+ RL++EEL LR L + GV D V L RL D+ SA +DD+R+CH CKH CF SAV C CS ++V+CLRH +C R F L+W +E+ + + ++ LE
Sbjct: 50 NLADIPFGPVFHPSVEEFSQDPLKYIEAIRPLAEK---------------------------------------YGICKIVPPAGWDPPFALDVDSDKTFSTKDQSIHRLQEGISFGDGKDYTIKG---------------------------------------------YQKMCSGWSKEWKAKNYSPAKPTNSSPPATAFSNGSVISNGVTAVPDLXXXXXXXXXCPAPPIPSTPSGPQSSRHESTSVHISAQTGSTNLAHDEPKKFTPENLEREYWDIVETQTQSIDVDYGNDVDTDSFGSAFPLSDKGRSVNSSNFLSQSSVHDDLAEPAFGSDDYYKETFWNLNNIPNSPYSVLRHLKIGVNGINVPWLYFGCLFSTFCWHNEDNYMYSINYHHKGAPKQWYGVPGTKHDADGVEQVFKKFLSIK-----------------------MRDVPDLLHHITTSFSPRLLQNEGVRVCKILQKEGEFVITFPRAFHGGFSFGPNVGE------------------------AVNFALQDWIPHAVAANERYRSFGRPSVFSHDRLVYTMAHHYKELRTKEICHNLIQELTRLKEEELLLRKKLISAGVRDVSGDVELPPNRLDKLDDESADYDDKRLCHSCKHICFFSAVCCECSDSKVSCLRHSHYMCRCHIS---RKFMLVWTPEEEMKDAIANVRKRMSELE 624
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: A0A1E7FMP1_9STRA (JmjC-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMP1_9STRA) HSP 1 Score: 320 bits (819), Expect = 4.360e-92 Identity = 177/433 (40.88%), Postives = 246/433 (56.81%), Query Frame = 1
Query: 1033 HMELEYWRMVDVGEPRATVEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRAL----DFAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPWLYIGMQFTTFAWHNEDNYLYSINYNHEGAPKIWYGVPGVQ--ARSFETAVRGHLHLHXXXXXXXXXXXXXXXXXXXXXXTMEDDPELLYNITTMVTPALLREAKVSVSRACQDAGTFVVTFPKAYHGGFSTGYNMGEGMCVVXXXXXXXXXXXXXXXXXXXAVNFAMPDWVKFGHESNERYRLSSRASVFSYDRMAFMLAMYLPEH-TLQSCKAVLTEVRRLRDEELNLRAVLANDGVVDPGAGVRLHKFRLSVFDEISAQHDDRRMCHVCKHTCFMSAVVCACSQTRVACLRHWRGICDAGAPGPHRAFFLLWLSADELNGMVDITERYVASLE 2310
++E +YW +V+ VEYGND+D EF SGFP V + G+A FA +DY+ +S WNL N+P+ SVLR + I G+NVPW+Y G FTTF WHNEDNYLYSINY+H+GAPK WYGVPG + A E+ + +L + M D P+LL++ITT +P LL+EA+V +S+ Q G ++VTFP+A+HGGFS G N+GE AVNFA DW+ G ++NERYR +R +VFS+DR+ F +A +L E + ++CK +L EV R+ +EEL LR L GV D ++L RL DE SA +DD+R+CH CKH CF SAV C CS+++V+CLRH +C R + ++W +EL ++ + A L+
Sbjct: 216 NLEQDYWDVVENKTREFRVEYGNDVDTEEFGSGFPLSERGRAVHGTLD-PGKAKLPDPKFATEDYFKESWWNLNNIPWTPDSVLRHVKVGINGINVPWMYYGSLFTTFCWHNEDNYLYSINYHHKGAPKQWYGVPGTKKDASGLESVFKRYLSMK-----------------------MRDVPDLLHHITTQFSPRLLQEAQVPISKLLQHEGEYIVTFPRAFHGGFSMGPNIGE------------------------AVNFATHDWIAHGSDANERYRSFARPAVFSHDRLTFTMAHHLNEQKSYKNCKLLLQEVERVVNEELQLRQKLLTQGVRDVSDSIQLPPNRLDQLDEDSADYDDKRLCHACKHICFFSAVACECSRSKVSCLRHSHYMCRCPF---ERRYLMVWSPEEELTQTCELVKERCAELK 597
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: A0A835ZA84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA84_9STRA) HSP 1 Score: 955 bits (2468), Expect = 0.000e+0 Identity = 752/752 (100.00%), Postives = 752/752 (100.00%), Query Frame = 2
Query: 1934 RTMVVMVSTLAIMGEGPLASLFRDAWAGRPVVMPTIGQGLNKPPLAHIDDICEAVAGLLAKAYTADAQQADVTVVADCGDAQHTLADVCAAIARVFARGALPQAAAAMDAVAFADLLLDQRPGCTALAALQLDLPLKGXXXXXXXAQFLRERRIEPLRVLVLAPPCAGASAACAALAQRLPLRHVTLWSAVESLLLANGRPPLRLAPYPPIEIAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSSRSAATLPIALALTLERGPPPFAGVTGAAGEPXXXXXXXXXXXXXXXXXXXLRRALRDLQCLRYGYVLDGTPAAALLARICFGTSAXXXXXXXXXXXXXXXXXXXXXXXXXXDLDPDLAPAHIVYLHATKAELLARWDAVAAAAQPPAGTDKASTAXXXXXXXXXXXXRAAYVPQLDVYLEDAALDSSAQQPGQETGADASLPSAPLRVPAHVAQLAESLLLQPHATAAGEGAAEAIAAHVTGGLPLGFAVMEGEGWDEPERARAPSAPGGAAGGQQEVPVPSXXXXXXXXXXXXXXXXXXXXXXXDATRQAVARLDVGQRTQLDARAADMRRYLLETGVLEEVARAIVEVAAGAGAVRDDAAAKAEPGXXXXXXXXXXXXXXXXXXVLPPDAVRLVGERLVAAGRRAAARAEALAALRYTAGCALLAQLDDMEGGTAG 4189
RTMVVMVSTLAIMGEGPLASLFRDAWAGRPVVMPTIGQGLNKPPLAHIDDICEAVAGLLAKAYTADAQQADVTVVADCGDAQHTLADVCAAIARVFARGALPQAAAAMDAVAFADLLLDQRPGCTALAALQLDLPLKGXXXXXXXAQFLRERRIEPLRVLVLAPPCAGASAACAALAQRLPLRHVTLWSAVESLLLANGRPPLRLAPYPPIEIAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSSRSAATLPIALALTLERGPPPFAGVTGAAGEPXXXXXXXXXXXXXXXXXXXLRRALRDLQCLRYGYVLDGTPAAALLARICFGTSAXXXXXXXXXXXXXXXXXXXXXXXXXXDLDPDLAPAHIVYLHATKAELLARWDAVAAAAQPPAGTDKASTAXXXXXXXXXXXXRAAYVPQLDVYLEDAALDSSAQQPGQETGADASLPSAPLRVPAHVAQLAESLLLQPHATAAGEGAAEAIAAHVTGGLPLGFAVMEGEGWDEPERARAPSAPGGAAGGQQEVPVPSXXXXXXXXXXXXXXXXXXXXXXXDATRQAVARLDVGQRTQLDARAADMRRYLLETGVLEEVARAIVEVAAGAGAVRDDAAAKAEPGXXXXXXXXXXXXXXXXXXVLPPDAVRLVGERLVAAGRRAAARAEALAALRYTAGCALLAQLDDMEGGTAG
Sbjct: 7 RTMVVMVSTLAIMGEGPLASLFRDAWAGRPVVMPTIGQGLNKPPLAHIDDICEAVAGLLAKAYTADAQQADVTVVADCGDAQHTLADVCAAIARVFARGALPQAAAAMDAVAFADLLLDQRPGCTALAALQLDLPLKGXXXXXXXAQFLRERRIEPLRVLVLAPPCAGASAACAALAQRLPLRHVTLWSAVESLLLANGRPPLRLAPYPPIEIAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSSRSAATLPIALALTLERGPPPFAGVTGAAGEPXXXXXXXXXXXXXXXXXXXLRRALRDLQCLRYGYVLDGTPAAALLARICFGTSAXXXXXXXXXXXXXXXXXXXXXXXXXXDLDPDLAPAHIVYLHATKAELLARWDAVAAAAQPPAGTDKASTAXXXXXXXXXXXXRAAYVPQLDVYLEDAALDSSAQQPGQETGADASLPSAPLRVPAHVAQLAESLLLQPHATAAGEGAAEAIAAHVTGGLPLGFAVMEGEGWDEPERARAPSAPGGAAGGQQEVPVPSXXXXXXXXXXXXXXXXXXXXXXXDATRQAVARLDVGQRTQLDARAADMRRYLLETGVLEEVARAIVEVAAGAGAVRDDAAAKAEPGXXXXXXXXXXXXXXXXXXVLPPDAVRLVGERLVAAGRRAAARAEALAALRYTAGCALLAQLDDMEGGTAG 758
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Match: A0A836CKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC9_9STRA) HSP 1 Score: 301 bits (770), Expect = 6.810e-90 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 3
Query: 585 MPHQRTMARGMKVKTNVPSSSSSXXXXXXXXXXXLPLLPLXXXXXXXXXXXXXXSAMIITTRNCSASRPVRTATTRSTPRAHELAHWPGSSRGGGGSASPAAASTDAFSCGSRSMARQNLTACAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRRSTLAWHMSDACAARARSMMQRIWGGCRGGAPARGYGRAIASWRPRMPAKPSPPPPWKGGRPARMR 1301
MPHQRTMARGMKVKTNVPSSSSSXXXXXXXXXXXLPLLPLXXXXXXXXXXXXXXSAMIITTRNCSASRPVRTATTRSTPRAHELAHWPGSSRGGGGSASPAAASTDAFSCGSRSMARQNLTACAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRRSTLAWHMSDACAARARSMMQRIWGGCRGGAPARGYGRAIASWRPRMPAKPSPPPPWKGGRPARMR
Sbjct: 1 MPHQRTMARGMKVKTNVPSSSSSXXXXXXXXXXXLPLLPLXXXXXXXXXXXXXXSAMIITTRNCSASRPVRTATTRSTPRAHELAHWPGSSRGGGGSASPAAASTDAFSCGSRSMARQNLTACAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRRSTLAWHMSDACAARARSMMQRIWGGCRGGAPARGYGRAIASWRPRMPAKPSPPPPWKGGRPARMR 239 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348135 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|348135 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4084 ID=mRNA_4084|Name=jgi.p|Trimin1|348135|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3261bp|location=Sequence derived from alignment at Contig_20:374962..387855+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCGCCACCGGCAGCAGTGCTCGCCGAAGCCGCCATCATCGGCGACGTback to top protein sequence of jgi.p|Trimin1|348135 >Trimin1|348135|estExt_Genemark1.C_Ctg_200046 ID=Trimin1|348135|estExt_Genemark1.C_Ctg_200046|Name=jgi.p|Trimin1|348135|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=895bp MPPPAAVLAEAAIIGDVVLPHAKKKRGRPVGSKEVPVPVTLKPQRRRTQTback to top mRNA from alignment at Contig_20:374962..387855+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4084 ID=mRNA_4084|Name=jgi.p|Trimin1|348135|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12894bp|location=Sequence derived from alignment at Contig_20:374962..387855+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_20:374962..387855+ >mRNA_4084 ID=mRNA_4084|Name=jgi.p|Trimin1|348135|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2685bp|location=Sequence derived from alignment at Contig_20:374962..387855+ (Tribonema minus UTEX_B_3156 )back to top |