mRNA_405 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157541
Unique NamemRNA_405
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: A0A836CEZ6_9STRA (AUREO-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEZ6_9STRA)

HSP 1 Score: 343 bits (881), Expect = 2.160e-119
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1 
Query:    1 TKKRTHDKAEQQQKRRERNRVLAKRTRLRKKFMFQSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSVVRMHGCI 534
            TKKRTHDKAEQQQKRRERNRVLAKRTRLRKKFMFQSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSVVRMHGCI
Sbjct:    1 TKKRTHDKAEQQQKRRERNRVLAKRTRLRKKFMFQSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSVVRMHGCI 178
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: A0A835YKT7_9STRA (PAS domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT7_9STRA)

HSP 1 Score: 234 bits (597), Expect = 6.660e-75
Identity = 121/155 (78.06%), Postives = 129/155 (83.23%), Query Frame = 1 
Query:   49 ERNRVLAKRTRLRKKFMFQSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSV 513
            ERNRVLAKRTRLRKKFMFQSLQTQVSSLH EN RLK IV  RCGDRG  +L  C    +  VVA+ T QATALL +SDFLL+KALQ S P+FCVTDP+L DCPIVYASDGFIALTGYSR QVLGRNCRFLQGPDTDPD V +LRRGI  GRDTSV
Sbjct:   41 ERNRVLAKRTRLRKKFMFQSLQTQVSSLHMENERLKEIVIKRCGDRGPRILADCCRGGLSPVVASCTRQATALLQRSDFLLMKALQTSQPAFCVTDPTLADCPIVYASDGFIALTGYSRAQVLGRNCRFLQGPDTDPDAVGKLRRGIEAGRDTSV 195
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: A8QW56_VAUFR (Aureochrome2 n=1 Tax=Vaucheria frigida TaxID=195983 RepID=A8QW56_VAUFR)

HSP 1 Score: 196 bits (497), Expect = 8.910e-59
Identity = 97/159 (61.01%), Postives = 121/159 (76.10%), Query Frame = 1 
Query:   49 ERNRVLAKRTRLRKKFMFQSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSVVRMH 525
            ERN+VLA++TRLRKKF+FQ L+ QV SL+QEN RLK IV   CG     +L       +P++VA    +ATAL+ +SDF L+KAL +S PSFCVT+P +PDCPIV+ASD FI +TGYSR+QVLGRNCRFLQGPDTDPD V  LR+GI EG+DT V  ++
Sbjct:  135 ERNKVLARKTRLRKKFLFQGLRNQVMSLYQENLRLKEIVKNHCGINSKKILDDNCLGDMPDIVATCGQEATALIQRSDFTLMKALYSSQPSFCVTNPLVPDCPIVFASDSFIKITGYSREQVLGRNCRFLQGPDTDPDAVRILRKGIVEGKDTDVTILN 293
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: A8QWV0_FUCDI (AUREO-like protein (Fragment) n=1 Tax=Fucus distichus TaxID=3012 RepID=A8QWV0_FUCDI)

HSP 1 Score: 187 bits (474), Expect = 2.340e-57
Identity = 94/138 (68.12%), Postives = 110/138 (79.71%), Query Frame = 1 
Query:  100 FQSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSV 513
            FQSLQ QV+ L   N RLKGI+ TRC +  A +++ C  + VP++VA+   QATALL QSDFLLVKALQ+S PSFCVTDP LPD PIVYAS+ FI LTGY R QVLGRNCRFLQGPDTDPD VA++R+GI EG+DTSV
Sbjct:   36 FQSLQQQVNDLQYVNERLKGIINTRCANNSAEIIRSC-VSRVPSMVADCANQATALLEQSDFLLVKALQSSQPSFCVTDPQLPDNPIVYASNTFIELTGYDRSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGKDTSV 172
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: C5NSW5_9PHAE (Aureochrome2-like protein n=1 Tax=Fucus evanescens TaxID=87147 RepID=C5NSW5_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.200e-55
Identity = 95/138 (68.84%), Postives = 111/138 (80.43%), Query Frame = 1 
Query:  100 FQSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSV 513
            FQSLQ QV+ L  EN RLKGI+ TRC +  A +++ C  + VP++VA+   QATALL QSDFLLVKALQ+S PSFCVTDP LPD PIVYAS+ FI LTGY R QVLGRNCRFLQGPDTDPD VA++R+GI EG+DTSV
Sbjct:  184 FQSLQQQVNDLQYENERLKGIINTRCANNSAEIIRSC-VSHVPSMVADCANQATALLEQSDFLLVKALQSSQPSFCVTDPQLPDNPIVYASNTFIELTGYDRSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGKDTSV 320
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: A0A126X138_9PHAE (Putative LOV domain-containing protein n=1 Tax=Saccharina sculpera TaxID=416830 RepID=A0A126X138_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.890e-54
Identity = 96/137 (70.07%), Postives = 109/137 (79.56%), Query Frame = 1 
Query:  103 QSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSV 513
            QSLQ QV+ L +EN RLKGIV +RC D    +L  C A+ VP+VVA+  GQATALL QS FLLVKALQ+S PSFCVTDP +PD PIVYAS+ FI LTGY R QVLGRNCRFLQGPDTDPD VA++R+GI EG DTSV
Sbjct:  186 QSLQQQVAGLQRENERLKGIVTSRCPDTVGEILLSC-ASRVPSVVADCAGQATALLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASESFIELTGYERSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGTDTSV 321
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: A0A126X141_9PHAE (Putative LOV domain-containing protein n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A126X141_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 7.520e-54
Identity = 94/137 (68.61%), Postives = 107/137 (78.10%), Query Frame = 1 
Query:  103 QSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSV 513
            QSLQ QV+ L +EN RLK IV TRC      +L  C+A+  P++VA+ T QATALL QS FLLVKALQ+S PSFCVTDP +PD PIVYASD FI LTGY R QVLGRNCRFLQGPDTDPD VA++R+GI EG DTSV
Sbjct:  204 QSLQQQVARLQRENERLKNIVTTRCPGSSEDILVSCAASKTPSMVADRTRQATALLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASDSFIELTGYDRSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGSDTSV 340
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: W7U8A5_9STRA (Aureochrome1-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8A5_9STRA)

HSP 1 Score: 183 bits (465), Expect = 8.820e-54
Identity = 95/166 (57.23%), Postives = 126/166 (75.90%), Query Frame = 1 
Query:   28 EQQQKRRERNRVLAKRTRLRKKFMFQSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSVVRMH 525
            EQ ++RRERNR+LA+RTRLRKKF+F+SLQ QV  L ++N+RLK IV  +  D+ + +L  C+   +P++V  +  +A+ +L + DF L+KALQ +  SF VTDPSLPD PIV+AS GF+ +TGYS  QVLGRNCRFLQGP TD  TVAQ+R+GIAEG DTSV  ++
Sbjct:  121 EQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTM-RLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLN 285
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: A0A126X2D6_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D6_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.020e-53
Identity = 91/137 (66.42%), Postives = 106/137 (77.37%), Query Frame = 1 
Query:  103 QSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSV 513
            QSLQ QV+ L +EN RLK IV +RC      +L  C+++  P++VA+   QATALL QS FLLVKALQ+S PSFCVTDP +PD PIVYASD FI LTGY R QVLGRNCRFLQGPDTDPD VA++R+GI EG DTSV
Sbjct:   83 QSLQQQVARLQRENERLKNIVTSRCPGSAGEILVSCASSKTPSMVADCARQATALLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASDSFIELTGYDRSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGSDTSV 219
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BLAST of jgi.p|Trimin1|157541 vs. uniprot
Match: A0A126WY75_SCYLO (Putative LOV domain-containing protein n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A126WY75_SCYLO)

HSP 1 Score: 184 bits (468), Expect = 1.720e-53
Identity = 92/137 (67.15%), Postives = 107/137 (78.10%), Query Frame = 1 
Query:  103 QSLQTQVSSLHQENARLKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKALQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPDTDPDTVAQLRRGIAEGRDTSV 513
            QSLQ QV+ L +EN RLK IV +RC D    +L  C+++  P++V + T QATALL QS FLLVKALQ+S PSFCVTDP +PD PIVYASD FI LTGY R QVLGRNCRFLQGPDTDPD VA++R+GI EG DTSV
Sbjct:  201 QSLQQQVARLQRENERLKNIVTSRCPDSVGEILMSCASSKTPSMVTDCTRQATALLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASDSFIELTGYDRSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGSDTSV 337
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157541 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEZ6_9STRA2.160e-119100.00AUREO-like protein (Fragment) n=1 Tax=Tribonema mi... [more]
A0A835YKT7_9STRA6.660e-7578.06PAS domain-containing protein (Fragment) n=1 Tax=T... [more]
A8QW56_VAUFR8.910e-5961.01Aureochrome2 n=1 Tax=Vaucheria frigida TaxID=19598... [more]
A8QWV0_FUCDI2.340e-5768.12AUREO-like protein (Fragment) n=1 Tax=Fucus distic... [more]
C5NSW5_9PHAE1.200e-5568.84Aureochrome2-like protein n=1 Tax=Fucus evanescens... [more]
A0A126X138_9PHAE2.890e-5470.07Putative LOV domain-containing protein n=1 Tax=Sac... [more]
A0A126X141_9PHAE7.520e-5468.61Putative LOV domain-containing protein n=1 Tax=Col... [more]
W7U8A5_9STRA8.820e-5457.23Aureochrome1-like protein n=2 Tax=Monodopsidaceae ... [more]
A0A126X2D6_9PHAE1.020e-5366.42Putative LOV domain-containing protein n=1 Tax=Scy... [more]
A0A126WY75_SCYLO1.720e-5367.15Putative LOV domain-containing protein n=1 Tax=Scy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:1293980..1298066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157541|e_gw1.3.485.1
BRITEko00000,ko01000,ko01001,ko03009
KEGG koko:K14858,ko:K20715
EC2.7.11.1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
DescriptionPAS domain
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2202@1|root,2QU3S@2759|Eukaryota
Evalue6.96e-54
Seed ortholog2880.D8LE91
Hectar predicted targeting categoryother localisation
TranscriptId157863
TrackFilteredModels1
ProteinId157541
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157541gene_405Tribonema minus UTEX_B_3156 geneContig_3 1293980..1298066 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157541Trimin1|157541|e_gw1.3.485.1Tribonema minus UTEX_B_3156 polypeptideContig_3 1293980..1298066 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_405_4exon_405_4Tribonema minus UTEX_B_3156 exonContig_3 1293980..1294105 -
exon_405_3exon_405_3Tribonema minus UTEX_B_3156 exonContig_3 1295095..1295208 -
exon_405_2exon_405_2Tribonema minus UTEX_B_3156 exonContig_3 1296254..1296430 -
exon_405_1exon_405_1Tribonema minus UTEX_B_3156 exonContig_3 1297947..1298066 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_405CDS_405Tribonema minus UTEX_B_3156 CDSContig_3 1297947..1298066 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_405 ID=mRNA_405|Name=jgi.p|Trimin1|157541|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=537bp|location=Sequence derived from alignment at Contig_3:1293980..1298066- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACGAAGAAGCGCACGCACGACAAGGCGGAGCAGCAGCAGAAGCGGAGGGA
GCGGAACCGCGTGCTGGCGAAACGGACGCGGCTGCGCAAGAAGTTCATGT
TCCAGAGCCTGCAGACGCAGGTTTCAAGCCTCCACCAGGAGAATGCGCGT
CTGAAGGGGATCGTTGCGACGCGCTGCGGGGACCGCGGTGCCGCACTGCT
GCAGCAGTGCTCAGCTGCGTCCGTGCCCAACGTGGTGGCAAACACAACGG
GACAGGCGACGGCGCTGCTGCACCAGAGCGACTTCCTGCTGGTGAAGGCG
CTGCAGGCGAGTGCGCCGTCGTTTTGCGTGACGGACCCTTCGCTGCCGGA
CTGCCCCATTGTCTACGCCAGCGATGGCTTCATCGCGCTGACGGGGTACT
CTCGCCAACAGGTGCTGGGGCGCAACTGCCGCTTCCTGCAGGGTCCGGAC
ACGGACCCGGACACGGTGGCGCAGCTGCGGCGCGGCATTGCGGAGGGCAG
AGACACCAGTGTGGTACGAATGCATGGTTGCATCTAG
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protein sequence of jgi.p|Trimin1|157541

>Trimin1|157541|e_gw1.3.485.1 ID=Trimin1|157541|e_gw1.3.485.1|Name=jgi.p|Trimin1|157541|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=179bp
TKKRTHDKAEQQQKRRERNRVLAKRTRLRKKFMFQSLQTQVSSLHQENAR
LKGIVATRCGDRGAALLQQCSAASVPNVVANTTGQATALLHQSDFLLVKA
LQASAPSFCVTDPSLPDCPIVYASDGFIALTGYSRQQVLGRNCRFLQGPD
TDPDTVAQLRRGIAEGRDTSVVRMHGCI*
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mRNA from alignment at Contig_3:1293980..1298066-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_405 ID=mRNA_405|Name=jgi.p|Trimin1|157541|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4087bp|location=Sequence derived from alignment at Contig_3:1293980..1298066- (Tribonema minus UTEX_B_3156 )
ACGAAGAAGCGCACGCACGACAAGGCGGAGCAGCAGCAGAAGCGGAGGGA
GCGGAACCGCGTGCTGGCGAAACGGACGCGGCTGCGCAAGAAGTTCATGT
TCCAGAGCCTGCAGACGCAGGTGCGCAGGGGGGCTGTGCCATTGAAAAAG
TAGAGTCAGTAACTGTCATCGTCGTTGCCACCCTACATGAAGTTACAACA
CGTACTTCACCAGTAGTGGCTTTTCAGGCAGATTGTTATCTTGGCGCGAG
TGCTACAGCCGTTCGCTGTGCGTTCTTGCTACCTGTGGCGCGTGAAAAGG
TCATGGTTCAGAGCCTGCAGACGCAGGTACGCGGGGTTGCTGTGCTGCGC
GTCGCCATGTTGAAGTTCATGCGCTCTTTTTTTAAGTTCAGACATGCCGC
CTGTTGCAGCGCTTCACATAATTACTTGCGACTCCTGCTAACTGAAGCAC
GTGCGAAAGTTACGAGTTATAGATTGCAGAGCCTGCAGGCGCAGGTACGC
AGCCGTGCTGCGTAGCGTTTCGGGCACATACATGGTGTGAGGGAGGCGTG
TGCATGTGAGCTAACTGGCTACCTGATTTAAAAGAAGATCAGTGCACGCA
GTGCAAATTCTTCTCTGTACAATCTCTGCCCCAAACTCAACACTCCGCGC
ACTATGTTGAAGTTTACCCACAGTCAGTAAGGTAGTCTGCCAGTAGATAC
CAGGGCTGTGTGCTCTGTGGCAGCACATCGAGGCCATGCTGTATCAGCTT
TTGTCTGAGAAGGTGATCTCAATGCCGTGCCAGAAATGGAAAACCAAAGG
GGGTCCAAGAACACGGGAAACCCGCAACTACCGAGTGCACTTGTCGATGA
AAGTGATGCTTGAGATCCAAAACGCATAACATGCACGTACAGGCTCACTG
TTGCAACGCTCCGTATGACCCAAACCTCAGCACGTGTTGAGCTATGCGCT
GTCACCGTTCAAGGCAGACAAGGGGGGCCATGTGCCTGCGTTCAGAGCCT
TAGCTTTAGTCACAGCGCCGCTTCATGTTGCTGCCTCTGGAGGACGCTGT
GACCAATGCTGCAATGCATCCAACGCGTGCAGTCTTGGGCGGTGCTCATT
TGGGGCGGAGAGGTCAAGTTCAAGTTCAACTGGGTTTACGCATAACTGCA
CTGCAATCGCTGCACCGCATGCATCAATCAGCTGGGTGCTTTGTACTGCA
CAGTGGCGATCTTGACAGCAGTTGCAGCAAGTGCGGCAGTTGCAGGCATG
AACCGCCTGTGTATACACACACACAGCCACCAGGGACAAGATTGTTTCAC
GTACTTGCAGCGTTCGCACGAATGCCTGACACCTCAAAGTGAAAAGTCAC
TTGTATCAATCACTTGTATCAATCCAGTTGAACTTTTCGCGAGCCTGGCG
CGCAACTGACACGGACTTCAGCGCTGCTTATGGGGTTGCCGCTGCCAGCA
CGCACTTTTAAAAAGCACCTTACACAGACGTCACACACGCAACAACTGCT
GCATATGTGCATCCAAAGTGGATGAAAATGCCGGAAACACGGGCAGTTTC
ATGACAGTTACAAAACAGTTACAGAGCTGGCAGCCAACTATGACAGCTTT
TGCCAACCGCTCTGTTCACCATATACATACATACAGGTTTCAAGCCTCCA
CCAGGAGAATGCGCGTCTGAAGGGGATCGTTGCGACGCGCTGCGGGGACC
GCGGTGCCGCACTGCTGCAGCAGTGCTCAGCTGCGTCCGTGCCCAACGTG
GTGGCAAACACAACGGGACAGGCGACGGCGCTGCTGCACCAGAGCGACTT
CCTGCTGGTGAAGGTGCGCGCGCAGCTTTCAGTTACGCCGAACTGCCACT
GCTCAATCAGTCAGTGTGCGCAAGCGACGGCTTGAAGTGTGCGTCCGTCA
GTGACGGGTCAACGGTAACAAGTGTGCACACAAGGGCTCGACGACTCTTG
GCAGCTTGAAGGCTGACACGTCTTACTGGCAGAAAACGTGGCACTCGCTT
TCCTGTCTGTGGCATGCGCTCCATATTAGACTATATCAAGGGCTCAAGGG
CTCAGCTAGATGTTATCATAGAACGGCAGACTAGGAGCGTGCTGGAGCGT
CTGCAGCAACGGCAGCACCTATGAACACTCCGTAACGGCGTGTCCGTTCC
TGCATGTACAGTGGCTCAGTTGACTCAGACTCAGGAGTCGACTCAACCTT
GTCAAGGCTGTCGAGGCTTGGCAGGGCTGCGGGCTGTCAAACATCACGGT
GTCGCACACCCACACAGCGCCACTGTATCTTGTGCGTGCCACTGCTAGTA
CCTAGAACAGCATACTTGCATTGCAGAAGAATCATTTGAAATGATGGGAT
GTGACGTGCCATTGCCCATGCAGGCACACTGCCACATCAACGCACCGCAC
ACGCTTGCAGCAGCAACAGTGCGTTCCGCTCGTTTTGCTTCTATCGCAAG
AATATATTTGCCCTGTATACTGACCGTGCACTCGTGTATGTCATGTCTTG
GTTCTGCAAACAGGCTTCGCCCTGCATATTGACCATGTGCTCATGCATGT
TATTCTCTAGTGTCCTTATTTGGTGTCGCAAACAGGCTTCATCCTGTATA
CTGATCCTGTACGCATGCATGCTATTCTTTGATATACCTACATACCCAAC
GTTACAGGCGCTGCAGGCCAGTGCGCCGTCGCGTTCTGCGTGATGGACAC
TTGTGTTGCATTGCCGCTGTGACGTACACAGCACACTGACAATGCCACTC
CCTGTGCGCCCTGATCATGCCCTGATCATGCACCAATGCATGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGCATTTGGCAT
GGCTACAGGCGCTGCAGGCGAGTGCGCCGTCGTTTTGCGTGACGGACCCT
TCGCTGCCGGACTGCCCCATTGTCTACGCCAGCGATGGCTTCATCGCGCT
GACGGGGTACTCTCGCCAACAGGTAGGGTTAGGGTTTGGGTTAGGTAGGA
TCAGGGTTAGGTTGGGTATGCGTGCCAGCTCAGGGCGAGGGTTAGGGTTA
GACAACGCGCGTCAGCAGGTTAGGGTTGAGGTTTCATGTTGATTGAACCG
ATTTGTCGGTTGAGCACAATCCACCGTTGCGTATATTGGTTTGTTTATTC
ATGCAGATCGAGTAGCCCAGCCTGCGTTGACATATGCACATGCATCAACA
GGATAGAGTAACGTTTACAATACATGGCGCCGACAGGGGGGCACTCGCCA
ATATACATGTAGGTATGTGCCACCTGCAGCATTCTAGTGGGTAACGTCAG
CAGCTGTTCAAGTTGAAGTATCATTGATCATTGAAGTGCTCTGCTGGCAT
ACTTTTGAGAACGTGAAGTACTGCGCAGTACGTGGTGCTATGTTGCAGGT
AATTTGTAATAGTTACGGATGCATGAGCCCAGTCAGCATATCAAGAACGG
TAGATGATAGTCGATTCAGAACTGCTTGAATTGAGTTTCACTTTCCGTTT
GCGTAAAGCTGTGGCATGGCTCAGTTATGCCCACAGGCGCCCGTTGGTGA
TGCCTACGGCAGAAGGAATGAATGTATTTGGAGTACATGGGGTTCTCAAC
AATGATTAAGTGTGTTTCGGGAGAATGTGGTACATGCCTATCCTTAAGGC
AACATCGTGTCCCGCGGTGGAGGTTACAGGTGTATTTATTAGTGCCGTTC
TGCTTGCCAGTCTGCCACTGGCGCCTTGCTGCCGAGCGATGGGGACTGCA
TCCATCATAGCACAATACCTACATACTCATTTCATCACTCACCGGCGTGT
CTCCACCGTGTGTGTCAACGTGAACACCCAGGCAACGCGCAAGTGCAGAT
AGCACAAAGCTCACTCATGTTCATCACTCGTAACTGCCACTAGAAAAATG
TTCACTCATCTTCATCACGTCCGCATTTTTTTGTTTTGTTTTTTGGGTCC
ACAACGCTCAGGTGCTGGGGCGCAACTGCCGCTTCCTGCAGGGTCCGGAC
ACGGACCCGGACACGGTGGCGCAGCTGCGGCGCGGCATTGCGGAGGGCAG
AGACACCAGTGTGGTACGAATGCATGGTTGCATCTAG
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Coding sequence (CDS) from alignment at Contig_3:1293980..1298066-

>mRNA_405 ID=mRNA_405|Name=jgi.p|Trimin1|157541|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=537bp|location=Sequence derived from alignment at Contig_3:1293980..1298066- (Tribonema minus UTEX_B_3156 )
ACGAAGAAGCGCACGCACGACAAGGCGGAGCAGCAGCAGAAGCGGAGGGA
GCGGAACCGCGTGCTGGCGAAACGGACGCGGCTGCGCAAGAAGTTCATGT
TCCAGAGCCTGCAGACGCAGGTTTCAAGCCTCCACCAGGAGAATGCGCGT
CTGAAGGGGATCGTTGCGACGCGCTGCGGGGACCGCGGTGCCGCACTGCT
GCAGCAGTGCTCAGCTGCGTCCGTGCCCAACGTGGTGGCAAACACAACGG
GACAGGCGACGGCGCTGCTGCACCAGAGCGACTTCCTGCTGGTGAAGGCG
CTGCAGGCGAGTGCGCCGTCGTTTTGCGTGACGGACCCTTCGCTGCCGGA
CTGCCCCATTGTCTACGCCAGCGATGGCTTCATCGCGCTGACGGGGTACT
CTCGCCAACAGGTGCTGGGGCGCAACTGCCGCTTCCTGCAGGGTCCGGAC
ACGGACCCGGACACGGTGGCGCAGCTGCGGCGCGGCATTGCGGAGGGCAG
AGACACCAGTGTGGTACGAATGCATGGTTGCATCTAG
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