mRNA_4031 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|160854
Unique NamemRNA_4031
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: A0A835ZEY0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY0_9STRA)

HSP 1 Score: 648 bits (1671), Expect = 2.090e-234
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 1
Query:    1 MSLILLQPENGVPATNGAPAKKYTATTKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXAATKALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSAHPRKLGANVPSYGVLGDDEPLEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASLSKNNNHA 1020
            MSLILLQPENGVPATNGAPAKKYTATTKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXAATKALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSAHPRKLGANVPSYGVLGDDEPLEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASLSKNNNHA
Sbjct:    1 MSLILLQPENGVPATNGAPAKKYTATTKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXAATKALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSAHPRKLGANVPSYGVLGDDEPLEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASLSKNNNHA 340          
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: A0A835YYD6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYD6_9STRA)

HSP 1 Score: 523 bits (1346), Expect = 2.560e-184
Identity = 262/338 (77.51%), Postives = 287/338 (84.91%), Query Frame = 1
Query:   49 GAPAKKYTATTKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXAAT-KALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSA-------------HPRKLGANVPSYGVLGDDEP-LEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASLSKNNNH 1017
            G PAKKYT T KAYKN EFLGSSQARLLR+MCEYEETMLRLKR+KI+AT+LVFGSARAKS+E+W AA+                    KA +KIE+T+WMG+MTDKIVELSRLLT W VS  C LG+DH+ISGVTRYH TDPRY++             HPR+LG+NVPSYGVLG+D P +EQGVY+CTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNE+VTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQ+TLPVVLFGKTFWQ VVNWQALVDFGTIAQ+DV+SL FTDSE EAF+FLVASLSKNN H
Sbjct:   39 GMPAKKYTPTVKAYKNAEFLGSSQARLLRIMCEYEETMLRLKRHKIRATILVFGSARAKSREEWAAALAAARALEAAAAAGEARXXXXKAARKIERTAWMGDMTDKIVELSRLLTAWGVSDACHLGRDHSISGVTRYHFTDPRYASGGSXXXXXXXXNGHPRRLGSNVPSYGVLGEDVPGMEQGVYICTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEFVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQQTLPVVLFGKTFWQTVVNWQALVDFGTIAQDDVNSLLFTDSEHEAFEFLVASLSKNNAH 376          
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: W7U367_9STRA (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U367_9STRA)

HSP 1 Score: 361 bits (927), Expect = 3.480e-121
Identity = 184/323 (56.97%), Postives = 227/323 (70.28%), Query Frame = 1
Query:   52 APAKKYTATTKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXA-ATKALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSAHPRKLGANVP--SYGVLGDD--EPLEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASLSK 1005
            AP KKYT   KAYKN +FL S  AR +RVMCEYEETM RLK Y +K+T+L FGSARAKS+E ++  +                  A  A+  + KT W+ E  DK+ ELS+ LT+W++  E +L +  T +GVTRYH           K    VP  SY ++ +D  E  EQ +Y+ TGGGPGFMEAANKGA+ VPGA  +GMGITLPFEDGLN YV+ ELAFEFHYFFTRKFWMVYHCQALVVAPGG GTLDELFEVLTLKQTGK+Q  +PVVLFGK FW+++++W AL D+G I+Q+DV  LFF D+  EAF +L++ L+K
Sbjct:    5 APEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYH----------LKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQKDVSGLFFADTVDEAFDYLLSRLTK 317          
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: W7TMM5_9STRA (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMM5_9STRA)

HSP 1 Score: 336 bits (861), Expect = 2.420e-111
Identity = 172/298 (57.72%), Postives = 209/298 (70.13%), Query Frame = 1
Query:   52 APAKKYTATTKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXA-ATKALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSAHPRKLGANVP--SYGVLGDD--EPLEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQ 930
            AP KKYT   KAYKN +FL S  AR +RVMCEYEETM RLK Y +K+T+L FGSARAKS+E ++  +                  A  A+  + KT W+ E  DK+ ELS+ LT+W++  E +L +  T +GVTRYH           K    VP  SY ++ +D  E  EQ +Y+ TGGGPGFMEAANKGA+ VPGA  +GMGITLPFEDGLN YV+ ELAFEFHYFFTRKFWMVYHCQALVVAPGG GTLDELFEVLTLKQTGK+Q  +PVVLFGK FW+++++W AL D+G I+Q
Sbjct:    5 APEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVKSTILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKTEWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYH----------LKTRGPVPHQSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGITLPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELFEVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQ 292          
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: A0A7S1I3D1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I3D1_9EUGL)

HSP 1 Score: 311 bits (797), Expect = 4.060e-101
Identity = 169/345 (48.99%), Postives = 220/345 (63.77%), Query Frame = 1
Query:   25 ENGVPATNGAPAKK------------YTATTKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXAATKA-LQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSAHPRKLGANVPSYGVLGDDEPLE--QGVY-----VCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASL 999
            ENG P +  A   +            YT TTKAYKN +FL S QAR +R+MCE+EE   RL+  +++ T+L+FGSAR+ S ED   AV                 + +  L +++K+ WM    ++  EL++ LT+W ++   R GKD  I+G T      P +S  PR    N  +  +L +D      +GVY     +CTGGGPG MEAANKGAAMVPGAK+MGMGI+LPFE GLN++VT ELAFEFHYFFTRKFWMVY  Q ++V PGGFGT DELFE +TLKQTGKI+  LP+VLFGK +W+ V+NWQA+VD GTI+Q DVD + FTD   EA+  +  +L
Sbjct:   24 ENGAPPSKKAKVTECPYADTAKAETTYTETTKAYKNLDFLNSRQARSIRIMCEFEEPRRRLRSNQVQGTLLIFGSARSLSHEDHAKAVAACEQSIATCTDAKEKVSLEQKLVRLQKSKWMCGYCNQATELAKKLTDWTMTEGVRTGKD--IAGTTPEVVAKP-HSERPRTPTVNPANRYLLEEDSTGSPGKGVYPQHIVICTGGGPGIMEAANKGAAMVPGAKSMGMGISLPFEKGLNKFVTEELAFEFHYFFTRKFWMVYQAQCIIVFPGGFGTFDELFEAVTLKQTGKIRSDLPIVLFGKQYWEKVINWQAMVDLGTISQADVDGMLFTDDVDEAYDHITVAL 365          
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: A0A7S3AI53_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AI53_9EUKA)

HSP 1 Score: 301 bits (771), Expect = 2.930e-97
Identity = 163/331 (49.24%), Postives = 209/331 (63.14%), Query Frame = 1
Query:   79 TKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXX--AATKALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPR----------------------YSAHPRKLGANVPSYGVLGDDEPLEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASL 999
            TKAY+N +FL SS AR +R++ EYEET  RL+   +KATV++FGSARAK++E ++ A+                  AA  A  ++E++ WM E  DKI ELSR LTEW  +     G   TISGV R      R                      Y AH     A  P +          Q +++CTGGGPGFMEAANKGA    G +++GMGITLPFE GLN YVTPELAFE+HYFFTRKFWM ++ QALVVAPGGFGT DELFE++TLKQTGK+ K +P+VLFGK +W+ ++NW+AL  +GTI +ED+ SL FTDS +EAF+++   L
Sbjct:   24 TKAYRNDDFLNSSHARHIRILAEYEETQQRLRAQGVKATVMIFGSARAKNREQYDVAMAKEVEQMSSSPEGSEAYEAAAGAKARLEQSEWMIEQMDKITELSRRLTEWGFTARYNPGT--TISGVARSSELKRRIERSNSQERGLPNLANKETSYSYVAHSSDTTAPSP-HKEESRGRRKTQSIFICTGGGPGFMEAANKGAYQAEG-RSIGMGITLPFEKGLNPYVTPELAFEYHYFFTRKFWMAFYMQALVVAPGGFGTCDELFEIVTLKQTGKMNKQIPIVLFGKQYWEDIINWKALARYGTIKEEDISSLLFTDSIEEAFEYVTQRL 350          
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: A0A6U7UNL8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U7UNL8_9EUGL)

HSP 1 Score: 300 bits (767), Expect = 1.250e-96
Identity = 160/321 (49.84%), Postives = 206/321 (64.17%), Query Frame = 1
Query:   67 YTATTKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXAATKA-LQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKD------HTISGVTRYHHTDPRYSAHPRKL---GANVPSYGVLGDDEPLEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASL 999
            YT TTKAY+N +FL   QAR +R+MCE+EE   RL+  +++ T+L+FGSAR+ S ED   AV                 + K  L +++K+ WM    ++  EL++ LTEWA++   R GKD        ++         P  SA+   L       PS GV        Q + VCTGGGPG MEAANKGAA+VPGAK+MGMGI+LPFE GLN++VT ELAFEFHYFFTRKFWMVY  Q ++V PGGFGT DELFE +TLKQTGKI+  LP+VLFGK +W+ V+NWQA+VD GTI+Q DVD + FTD    A+  +  +L
Sbjct:   48 YTETTKAYRNLDFLSCRQARSIRIMCEFEEPRRRLRSNQVQGTLLIFGSARSLSHEDHANAVATCEQAIAACTDTKEKVSLKQKLIRLQKSKWMCGYCNQATELAKKLTEWAMTEGVRTGKDIVGTAPEVVATPCPQQPLTPVSSANRYLLEEDSQGSPSKGVY------PQHIVVCTGGGPGIMEAANKGAALVPGAKSMGMGISLPFEKGLNKFVTDELAFEFHYFFTRKFWMVYQAQCIIVFPGGFGTFDELFEAVTLKQTGKIRADLPIVLFGKQYWEKVINWQAMVDLGTISQADVDGMLFTDDVDAAYNHITVAL 362          
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: A0A7S1W9I9_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1W9I9_NEODS)

HSP 1 Score: 298 bits (763), Expect = 2.840e-96
Identity = 160/318 (50.31%), Postives = 204/318 (64.15%), Query Frame = 1
Query:   52 APAKKYTATTKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXAATKA-LQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSAHPRKLGANVPSYGVLGDDEPLEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASLS 1002
            A AK  T TTKA++N++FL S  AR+LR++CE++E  LRLKR  +K T+L FGSAR+ ++ D+E                   AA +A + +  K  WM E  DK  ELSR LT W++       +D ++               HP  L   V S     +D    Q + V TGGGPG MEAAN+GAA VPGAK+MGMGI+LPFE GLN YVTP+LAFEFHYFFTRKFWM+Y  +ALVV PGGFGT+DE+FE+LTL+QTGK+ K LP+VL G  +W+ VVNWQA+ DFGTI+QE+VD L F D    AF  +V  L+
Sbjct:   19 AKAKGLTPTTKAFENRDFLQSRDARMLRILCEFQEPQLRLKRNGVKGTILFFGSARSMARADFEKTHNGLVAELNATEDANAKAAIQAKIDRFAKVEWMCEFADKAEELSRRLTAWSM-------EDSSVKADLL---------EHPDYLTGAVAS-----EDSEKSQPLVVLTGGGPGIMEAANRGAASVPGAKSMGMGISLPFEKGLNPYVTPDLAFEFHYFFTRKFWMMYSAKALVVGPGGFGTMDEVFELLTLRQTGKLPKDLPIVLLGSKYWKTVVNWQAMADFGTISQEEVDRLCFADDVDTAFNHIVKQLA 315          
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: R1FLW8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FLW8_EMIHU)

HSP 1 Score: 291 bits (746), Expect = 1.970e-93
Identity = 166/316 (52.53%), Postives = 205/316 (64.87%), Query Frame = 1
Query:   79 TKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXAATK--ALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSAHPRK--LGANVPSYGVLGDDEPLEQ-----GVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASL 999
            TKAYKN+ FL SS AR LR++CEYEETM RL+   I+AT++ FGSAR+K +  ++ A+                 A     L++++K+ WM E  +KI +L++ +TEW++  +  L     +SGV+R   T  R     RK   G    +Y     D+   +     G+YVCTGGGPGFMEAAN+GA    G K++GMGITLPFE GLN YVTPELAFEFHYFFTRKF M YH QALVVAPGGFGT DELFE++TLKQTGK+Q  LPVVLFGK FWQ     +AL D GTI Q DVD L FTD   EAF FL + L
Sbjct:   39 TKAYKNEAFLSSSHARHLRILCEYEETMQRLRANGIRATIMFFGSARSKDRAQYDDALAKSRKAVAEAPDGSSEQALARGTLERLQKSEWMCEYMEKIRQLAQRVTEWSIKTKYSLANQ--VSGVSRA--TTARLIEEGRKSPAGGRKSAYLPHSTDDAYPRPADAPGIYVCTGGGPGFMEAANRGAHDA-GGKSVGMGITLPFETGLNPYVTPELAFEFHYFFTRKFSMAYHMQALVVAPGGFGTFDELFELMTLKQTGKMQSGLPVVLFGKQFWQ-----EALADSGTINQRDVDELLFTDDVDEAFAFLTSHL 344          
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Match: A0A7S0H9P5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0H9P5_9EUKA)

HSP 1 Score: 289 bits (739), Expect = 1.050e-92
Identity = 158/308 (51.30%), Postives = 192/308 (62.34%), Query Frame = 1
Query:   79 TKAYKNQEFLGSSQARLLRVMCEYEETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXXA-ATKALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYHHTDPRYSAHPRKLGANVPSYGVLGDDEPLEQGVYVCTGGGPGFMEAANKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYHCQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASL 999
            TKAY+N +FL S QAR +R++CEYEET  RL+   + ATV+ FGSAR+K        V                  A +AL ++    WM +  DKI ELSR +T W+V                                 A   + G +  D+ L   VYVCTGGGPGFMEAAN+GA  V G K++GMGITLPFE GLN YV+PELAFEFHYFFTRKFWM +H +ALVVAPGG GTLDELFE+LTLKQTGKIQ + PVVLFGK FW+  +NWQ L +FG  +  DVD+LFFTD   EAFQF+V++L
Sbjct:   71 TKAYRNADFLNSEQARHIRILCEYEETKQRLESVPVSATVMFFGSARSKDHATHARLVNEAQTIAAGTPGSEEVKEAEQALVRLASIEWMCDYMDKIRELSRRVTSWSVDR-------------------------------ATKSTCGAV--DQALP--VYVCTGGGPGFMEAANRGAVDVEGGKSIGMGITLPFEAGLNPYVSPELAFEFHYFFTRKFWMSFHMKALVVAPGGMGTLDELFELLTLKQTGKIQNSFPVVLFGKAFWEGCINWQTLKEFGVCSPSDVDNLFFTDDVDEAFQFIVSAL 343          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160854 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEY0_9STRA2.090e-234100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYD6_9STRA2.560e-18477.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U367_9STRA3.480e-12156.97Cytokinin riboside 5'-monophosphate phosphoribohyd... [more]
W7TMM5_9STRA2.420e-11157.72Cytokinin riboside 5'-monophosphate phosphoribohyd... [more]
A0A7S1I3D1_9EUGL4.060e-10148.99Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3AI53_9EUKA2.930e-9749.24Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A6U7UNL8_9EUGL1.250e-9649.84Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1W9I9_NEODS2.840e-9650.31Hypothetical protein n=1 Tax=Neobodo designis TaxI... [more]
R1FLW8_EMIHU1.970e-9352.53Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S0H9P5_9EUKA1.050e-9251.30Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:1478386..1483982 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|160854|e_gw1.15.202.1
DescriptionPossible lysine decarboxylase
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1611@1|root,2QT54@2759|Eukaryota
Evalue3.23e-94
Seed ortholog2903.EOD36616
Hectar predicted targeting categoryother localisation
TranscriptId161176
TrackFilteredModels1
ProteinId160854
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160854gene_4031Tribonema minus UTEX_B_3156 geneContig_15 1478386..1483982 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160854Trimin1|160854|e_gw1.15.202.1Tribonema minus UTEX_B_3156 polypeptideContig_15 1478386..1483982 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4031_1exon_4031_1Tribonema minus UTEX_B_3156 exonContig_15 1478386..1478538 +
exon_4031_2exon_4031_2Tribonema minus UTEX_B_3156 exonContig_15 1479816..1480025 +
exon_4031_3exon_4031_3Tribonema minus UTEX_B_3156 exonContig_15 1481052..1481294 +
exon_4031_4exon_4031_4Tribonema minus UTEX_B_3156 exonContig_15 1482385..1482519 +
exon_4031_5exon_4031_5Tribonema minus UTEX_B_3156 exonContig_15 1483159..1483317 +
exon_4031_6exon_4031_6Tribonema minus UTEX_B_3156 exonContig_15 1483860..1483982 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4031CDS_4031Tribonema minus UTEX_B_3156 CDSContig_15 1478386..1478538 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4031 ID=mRNA_4031|Name=jgi.p|Trimin1|160854|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1023bp|location=Sequence derived from alignment at Contig_15:1478386..1483982+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTCTCATCCTTCTGCAGCCGGAGAATGGCGTTCCCGCAACCAATGG
CGCGCCTGCCAAAAAGTACACGGCAACAACAAAGGCTTACAAAAACCAGG
AGTTCTTGGGGAGCTCGCAGGCGCGCTTGCTGCGTGTGATGTGCGAATAC
GAGGAGACCATGCTGCGTCTCAAGCGCTACAAGATCAAGGCGACGGTGCT
CGTGTTCGGCAGCGCGCGCGCCAAGTCGCAGGAGGACTGGGAGGCCGCCG
TCGCGGCGGCGCGCGCGGCGGAGGCGGAGGCGGAGGGCGAGGCGAAGGCC
GCCGCCACGAAGGCGCTGCAGAAGATTGAGAAGACGTCGTGGATGGGCGA
GATGACCGACAAGATCGTGGAGCTGTCGCGGCTGCTGACGGAGTGGGCGG
TGAGCCCGGAGTGCCGCCTCGGCAAGGACCACACGATCTCCGGCGTGACG
CGCTACCACCACACGGACCCGCGCTACAGCGCGCACCCGCGCAAGCTCGG
GGCGAACGTGCCCTCGTACGGCGTCCTGGGCGACGACGAGCCGCTCGAGC
AGGGCGTGTACGTGTGCACCGGCGGCGGCCCAGGGTTCATGGAGGCGGCC
AACAAGGGCGCGGCGATGGTGCCCGGTGCCAAGAACATGGGCATGGGCAT
CACGCTGCCGTTCGAGGACGGGCTCAACGAGTACGTCACGCCGGAGCTCG
CGTTCGAGTTCCACTACTTCTTCACGCGCAAATTCTGGATGGTGTACCAC
TGCCAGGCGCTCGTGGTGGCGCCGGGCGGCTTTGGCACGCTGGACGAGCT
GTTTGAGGTGCTCACGCTCAAGCAGACCGGCAAGATTCAGAAGACGCTGC
CCGTGGTGCTCTTCGGGAAGACCTTCTGGCAAGCAGTCGTCAACTGGCAG
GCGCTCGTCGACTTTGGCACCATCGCGCAGGAGGACGTTGACTCGCTCTT
CTTCACCGACAGCGAGCAGGAGGCGTTCCAGTTCCTCGTCGCCAGCCTCT
CCAAGAACAACAACCACGCATGA
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protein sequence of jgi.p|Trimin1|160854

>Trimin1|160854|e_gw1.15.202.1 ID=Trimin1|160854|e_gw1.15.202.1|Name=jgi.p|Trimin1|160854|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=341bp
MSLILLQPENGVPATNGAPAKKYTATTKAYKNQEFLGSSQARLLRVMCEY
EETMLRLKRYKIKATVLVFGSARAKSQEDWEAAVAAARAAEAEAEGEAKA
AATKALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVT
RYHHTDPRYSAHPRKLGANVPSYGVLGDDEPLEQGVYVCTGGGPGFMEAA
NKGAAMVPGAKNMGMGITLPFEDGLNEYVTPELAFEFHYFFTRKFWMVYH
CQALVVAPGGFGTLDELFEVLTLKQTGKIQKTLPVVLFGKTFWQAVVNWQ
ALVDFGTIAQEDVDSLFFTDSEQEAFQFLVASLSKNNNHA*
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mRNA from alignment at Contig_15:1478386..1483982+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4031 ID=mRNA_4031|Name=jgi.p|Trimin1|160854|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5597bp|location=Sequence derived from alignment at Contig_15:1478386..1483982+ (Tribonema minus UTEX_B_3156 )
ATGTCTCTCATCCTTCTGCAGCCGGAGAATGGCGTTCCCGCAACCAATGG CGCGCCTGCCAAAAAGTACACGGCAACAACAAAGGCTTACAAAAACCAGG AGTTCTTGGGGAGCTCGCAGGCGCGCTTGCTGCGTGTGATGTGCGAATAC GAGGTGCGTGTGCAGCTCAATTCTTGCAATTCTCAAGAGCTGCTGACTTC ACGACATGGCGTCAAACAACTACTTGACACAACATTGCGTTTTGTTGTAA CGCAACACGCCGCAGTCGTGTCAACACCTACAAGCCTTCTGGCACGTCAA GGCACGCTCTGTGATGGGTCAGACACACGCATATTTTTGCCGTACGATGA ACCGCCTGCAACATATTATTGTTTTAGTTGCAATTTGTTCTCAAGAAAGA CCTGCACCTTCGTGTGCCAGATGAGCGCGACTGAGACCTCAGATTGCCCG GAAGGGAATTAAAACACAGGAAAATCAAAGCTTGAGTAGGGAGAGCATAG GGTAAGGCCGCTGCAAATTCTGCGCGCCAGCCTTCTGACCATGTACTGCT GGAGAAATCGAGGCTGCAGGTTCAACAAAAGGCATAAGACAGCGGCATAT TAGCTGTAGCAACAGCAGCAGGAATAATCGTCCAGCACTGGTGGTGGCAG TACCAGCAGCGTCAGACAGTGCATTGGCCCTGAATCAGCACCACTGCGCC TGCACCAATGCGCTGCCTCGATGCCTTGATGCACCATTACGCAGCTTCAA TTACCAGTGACATCATGAGGCTGTTGCTGCAGTACTGCAGGCTGTACCGC TGCCGCTGCTAAATGCGCTTTCCCGGACACATAGACCTGAACATGCCAGG AAGCAGAAGTCTACCACTTTCTAATCATCAATAAGAGTTCAAATTGTTCC TTGTCTTCGGCTGGCCGGCTCAGGCAAGCGTGTGACGGCAGTGGCTTGCT TTAAACGACACAATGGCAGATCTCAAGGGATTATGGCCGCTTCCCGAAAC TCAAACCCCATAGCACAACTGTCAGGACATACTCTGTGAGTGTGCCGCGC TCGCCTTTGAGGCAGCCACCTCCCGCTTTCAACTTGCGGGTTCGTGCAAG CATGCGCTTTTCCGAATAGAAAGGCCTGCACGGGCGGAGCATCGTTTGCG GCGCTATGCGATGCGCCCCATCTTCTGCAACCAATCATGCGCCGCCTTGG CGGCAACTGCGCATGTCAGGCGCAATGGGCGAGCGAGGAACGTTGACACA GTGCTCAGCCCTGGGCGCCGCACGCGAACCGCAACACACCGCGGGCGAAG GCGGTTGTTGCAGCTGCCACAGACAGTGCTGAGCGGTGCCCTAGTGCGCT CAAGCTCTGGAAGACAGAAACACCATATTTGCGGCACGCCGATCCTGAAT TCCCACGCCGCCATCCCCCACCCCGCGCAGGAGACCATGCTGCGTCTCAA GCGCTACAAGATCAAGGCGACGGTGCTCGTGTTCGGCAGCGCGCGCGCCA AGTCGCAGGAGGACTGGGAGGCCGCCGTCGCGGCGGCGCGCGCGGCGGAG GCGGAGGCGGAGGGCGAGGCGAAGGCCGCCGCCACGAAGGCGCTGCAGAA GATTGAGAAGACGTCGTGGATGGGCGAGATGACCGACAAGGTGAGCGCTG CTGCTGCAACAGGTTGAGCGCTGCTGCGACGGTCCTGAGCGCTGCGAACT GCGGAGCCGTGCTTCGGCGCAGCACGTGCCGGGGCGAGGGGCGCGCGCGG ACGCGTTCCGCGCTGTCACGTGCTGAGCGCTGCAACGCGATGAGCGCACT GAGCGCTGCCACGCGTTTATACCTACCAACGGCTCTACCAAAACTATACA TGAGCTTGAGCCGGGGCCGGTGGGGGGGAGGGGGGGGGGGGGGGGGGGGC AGCAGCCGCCAAGGCACTGCAGATCGGCAAGGAGGCGAGGGTTGTGGATT TATGTACGCGCGGTGATGGATGGGCAAGTCGAGCCGTGACGCATGCCCGT TGCCATGAAGTTGCCGCGCGTATGGTCGCAGTGATGAGCGGGCCGCCTCG CAGAGGGCGCCGCAGGCATTTAGAAGCGCTGCTGAGCGGGCGAAGTGGCG CGCACGCGGTGTTTCACACCGCGGGCTCCATGCTGGTTGATGATCGATCA CACACCCCGACAGGCCTGGCGCGCGCTCCTTCCCCCTCCTGCACGGATTG CTGGAGGCGGCAGCGTCGCAGCGCCGGCAGTCTGCCTTTCATGGCCACAG TCCCTTGCCCGCCTCTGCCAACGCGCGTATTGTGGAGTTGTTACGGCTGC TGAAGGTGTGGTCCGTGAGCCCACAGTGCCGAGCGCACCGTTCACCGACC ACACCTTCATAACGCCTACAGTTCGCCCGCCACGCCTACACATTCTTATT ACCTTTTGCTTGGCGGTGCCTACAACCCCACATCCGGTCGCGGTCGCGCC ACACCTGCTCACGCGCCCGTCTGCAGATCGTGGAGCTGTCGCGGCCGCTC ACAGAGTGGGCGGTGAGCCCGGAGTGCCGCCTCAGCAAGGACCTCACCAT CCATTAACCCACAATCTGCCCACCACGCCTATACTTCCATGTCAAACCGT TTGCGCTTGGCGGCACCCACATTCCGCCGCGGTCGCACCCCACCCTGCTC GCGCGCCGCCGTGCAGATCGTGGAGCTGTCGCGGCTGCTGACGGAGTGGG CGGTGAGCCCGGAGTGCCGCCTCGGCAAGGACCACACGATCTCCGGCGTG ACGCGCTACCACCACACGGACCCGCGCTACAGCGCGCACCCGCGCAAGCT CGGGGCGAACGTGCCCTCGTACGGCGTCCTGGGCGACGACGAGCCGCTCG AGCAGGGCGTGTACGTGTGCACCGGCGGCGGCCCAGGGTTCATGGAGGCG GCCAACAAGGTGCGCTGCGCGCGCGTGTGAGCGCGTGATAGAGTTGAGAT TGCGTCAGCGCTCGCGCCGCTGCGCTGCGAGTATCGGCGTGCGAGACGTG TGCGGGGTGTGCACTGGGGCATGCGCGGCAAGGGGGGAGGGGTGGGGGTA AGGTCGGGCGGGAGTTTTTGAGTCCCTGGAAGGGCGGCCGTCTAGAATCA GTGTTTTGGTACATTTCAGTGCTAGTGTACACAGGGACGCATGCAATGCG TACAAGGTGCGCGTGCGTTGCGAGCGATGCTCCGCGTCGCGTTAGCAGTC GAGCTGTTGCAGCGATCTGCCGGCCTCGCAGGGAGCGTGCTCGGGGTAAT GCCGGGGCTTTTTGTGGGTTCCCTGGAGTGCCGGTCATCAAGCGTCAGTG CTTGAGCACTTTGCGTTGAAAACGTCTGCGGCGATGTATGCGCGGCGTAC GTGGCAGGGCTGGCCAACATGCCCTCACATAGCGCGCACATTTGCGTGGT GTGCGCGCAGGGGGGGAGGGGGGGGGGGGGGGGGGGTTCAGACAGGTGAG GGTTATCGGAGAGCGCATACCGTGGAGTCAGAACTTTGACGTTGATGCAG TACTTTGACGTTGACTCCAACATCGGGTCTCGCCGCTGATCAGTGATGAC ATCTTCTGGCGCACAAGCTTAAAAGAGCGTCCGCTGTAATGTAACTTTAA CCCAGACCTTGGCGCGCCAAGCGTCACAGCACTCGCGGTGACCTTGCACC AGTGATGCTATTGTGCACTCCATGTGTTTACACTGACGCCAGGGGAAGGT GTACTGCGTCTGCGGCCGCTGATGCGTTCCGCTGACTTCAGCACAACCAG TTGAGGTTATGGGGGGTTTTGAACTGCGCATGTGACGCACCCTCCGCTTT CGTCGCATCGCTCCGCTGCGCAGGGCGCGGCGATGGTGCCCGGCGCCAAG AACATGGGCATGGGCATCACGCTAAGACTAGATCTGTTTACATTTCCTCC TATGAAGCATCATTTCGTATGTGCAGCCTTGAAACTTCAGCATTGATGAT GGCGCGCTAGCAACTCACACGCTGCTGTCGCTGCCATCGCGCTGCGCAGG GCGCGGCGATGGTGCCCGGTGCCAAGAACATGGGCATGGGCATCACGCTG CCGTTCGAGGACGGGCTCAACGAGTACGTCACGCCGGAGCTCGCGTTCGA GTTCCACTACTTCTTCACGCGCAAATTCTGGATGGTGAGTCCCCTGCGGC GGCGCGCCATGCGCAGTGCCGAGTCTTCCAGTTTGCGGTGCCGCAGGGAG GAATGCAGCAGGGCGGCAAAGGAGGTACTTCTGTTAGTGCGCGATGCCGC AGCCGCACCAGGGCCGCGACGGAGGTACTTCTGTTGGTGCGCGATGCCGC AGCCGCAGCAGGGCGGCGGAGGAGGCGCGGTGGAACCATGTGAAGATTGT CTTGCTCTCGCCGTGTTGCGCGCATGTGTCGTGCTCGCCATTGCTCGCCG GCTCTATGCCGCGCGTCCAGCGTCGCCTCTGTTGTGCGCTCTCTGGAAGC TGCGTCCCTTGTGTGCCCGCAGCGCCAGTTATTAGGGCTGCATCATAACG TGTTTGGCCACACAAATACGGCGTATTTGGGGCGTATTTGACAACCAGGA ATACGTCTTGACCAAGCTTCAATATGACAACATGCTGCGCAATGAGTGTA TTTGCGGGGCCTGTGGTGAGTCTGCTTGATTTCAAGCCTATAGTCCACCA CAAAAGGGGCACTTGAACTCAGAAATAACCTTCGACATGCGCTGTTGTGC AACCCTACCAGTCAATGCAAGACGGCGGCGTGCTGACGATCGCTGCGTAC ACTTGCGCGTTGCATATGCTCAGGTGTACCACTGCCAGGCGCTCGTGGTG GCGCCGGGCGGCTTTGGCACGCTGGACGAGCTGTTTGAGGTGCTCACGCT CAAGCAGACCGGCAAGATTCAGAAGACGCTGCCCGTGGTGCTCTTCGGGA AGACCTTCTGGCAAGCAGTCGTCAACTGGCAGGTGAGGGCCCCACTGAGG GGGGGGGGGTGCATGCATGACCTAGGGTTAGGGTTCGGCATTCGATGGTG CCTGTAGCAACATTGTGGCCAACGGTCACCGACAGGCCAGCCAGGGTTGT GGATTGCGCAAGTGCTGTGCAGTGTGAGCCATCCAGTCTTCAGATTCAGC TCACAGCATGCAGGAGTTAGTGCTTGGTGGACCTGCTCGCACTGGTTGCA CGAATCGCCATGGCGGTGGAAGTGCACTGACGGTGCCAATCTGCAATGTG GATGCCGTGTGACCTGATTTGCACCTCGTTCCTTGACACAACTGAGGTGG CAGACACCCTGTGGGCAGCAGTCATCAAGCGCAGTCTTGTGTGCACTGTC GCGCAAGGTGGCGTTTCCTGCTCTTCTTCAACAGATGGAATGCAGACCGC AAAGCATATGGAAAAGTGCTACAAACTCCTCGACGTGACGTACAGCAGCA AATGTACATGCTGACTGACACAAATGAATCAATGAAATGATAACCCCCTA CCGCCCCCCCCCCCCCCCTCGCAGGCGCTCGTCGACTTTGGCACCATCGC GCAGGAGGACGTTGACTCGCTCTTCTTCACCGACAGCGAGCAGGAGGCGT TCCAGTTCCTCGTCGCCAGCCTCTCCAAGAACAACAACCACGCATGA
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Coding sequence (CDS) from alignment at Contig_15:1478386..1483982+

>mRNA_4031 ID=mRNA_4031|Name=jgi.p|Trimin1|160854|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1023bp|location=Sequence derived from alignment at Contig_15:1478386..1483982+ (Tribonema minus UTEX_B_3156 )
ATGTCTCTCATCCTTCTGCAGCCGGAGAATGGCGTTCCCGCAACCAATGG
CGCGCCTGCCAAAAAGTACACGGCAACAACAAAGGCTTACAAAAACCAGG
AGTTCTTGGGGAGCTCGCAGGCGCGCTTGCTGCGTGTGATGTGCGAATAC
GAGGAGACCATGCTGCGTCTCAAGCGCTACAAGATCAAGGCGACGGTGCT
CGTGTTCGGCAGCGCGCGCGCCAAGTCGCAGGAGGACTGGGAGGCCGCCG
TCGCGGCGGCGCGCGCGGCGGAGGCGGAGGCGGAGGGCGAGGCGAAGGCC
GCCGCCACGAAGGCGCTGCAGAAGATTGAGAAGACGTCGTGGATGGGCGA
GATGACCGACAAGATCGTGGAGCTGTCGCGGCTGCTGACGGAGTGGGCGG
TGAGCCCGGAGTGCCGCCTCGGCAAGGACCACACGATCTCCGGCGTGACG
CGCTACCACCACACGGACCCGCGCTACAGCGCGCACCCGCGCAAGCTCGG
GGCGAACGTGCCCTCGTACGGCGTCCTGGGCGACGACGAGCCGCTCGAGC
AGGGCGTGTACGTGTGCACCGGCGGCGGCCCAGGGTTCATGGAGGCGGCC
AACAAGGGCGCGGCGATGGTGCCCGGTGCCAAGAACATGGGCATGGGCAT
CACGCTGCCGTTCGAGGACGGGCTCAACGAGTACGTCACGCCGGAGCTCG
CGTTCGAGTTCCACTACTTCTTCACGCGCAAATTCTGGATGGTGTACCAC
TGCCAGGCGCTCGTGGTGGCGCCGGGCGGCTTTGGCACGCTGGACGAGCT
GTTTGAGGTGCTCACGCTCAAGCAGACCGGCAAGATTCAGAAGACGCTGC
CCGTGGTGCTCTTCGGGAAGACCTTCTGGCAAGCAGTCGTCAACTGGCAG
GCGCTCGTCGACTTTGGCACCATCGCGCAGGAGGACGTTGACTCGCTCTT
CTTCACCGACAGCGAGCAGGAGGCGTTCCAGTTCCTCGTCGCCAGCCTCT
CCAAGAACAACAACCACGCATGA
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