mRNA_402 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: A0A835YX89_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX89_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.290e-6 Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 1 Query: 874 EQCRLPGCIVDLPALTELNLRECRKLVLL 960 EQCRLPGCIVDLPALTELNLRECRKLVLL Sbjct: 292 EQCRLPGCIVDLPALTELNLRECRKLVLL 320
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: A0A835Z619_9STRA (Putative chaperone protein dnaJ n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z619_9STRA) HSP 1 Score: 739 bits (1909), Expect = 9.030e-270 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 1 Query: 1 MRLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSSITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPLQPIEASARSVKMAPASVEEHAASCAQS 1101 MRLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSSITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPLQPIEASARSVKMAPASVEEHAASCAQS Sbjct: 1 MRLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSSITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPLQPIEASARSVKMAPASVEEHAASCAQS 367
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: A0A836CPW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPW3_9STRA) HSP 1 Score: 305 bits (780), Expect = 8.470e-98 Identity = 160/363 (44.08%), Postives = 221/363 (60.88%), Query Frame = 1 Query: 7 LYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG------------------QFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVL--NVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPH--KDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPLQ 1023 LYAVLGV ADA +IKKAYRKLAL+ HPDKNG P+KFK V AY +L DPE+R YDRFG+ESL + F QPP P DIF FFG G +T DI+HPLRV+L+D+YRG+ F+MC++R++ C C G+G G C C G G+ H MR + PG+MQRMQSMCP CKG GV C +C G + + DKQ V+V++ PGT D H+F+F+ +ADE P KATG+V+FV+QT +H + R +L++ K L++ +SL GF F+ H++G + + ++ +T+ KV++ AG+P + G + + F V +P L ++ L LPP P Q Sbjct: 4 LYAVLGVVKGADAASIKKAYRKLALLHHPDKNGCPDKFKGVAHAYGILSDPERREMYDRFGEESLNSNFNPQPP-----PADIFQQFFGGGFSAANMNGFPSFFTPGAASGATTTSDIIHPLRVTLDDIYRGKTFRMCVNRSIVCRSCDGTGAPAGHSRKCVGCAGVGMQHSMRPIAPGLMQRMQSMCPVCKGRGVCVDGDKTCDQCAGARVITDKQTVDVHMPPGTADQHRFVFRNLADECPGKATGNVIFVVQTKEHAVYKRHSQNLIMRKSLTVTESLCGFEFAIPHINGAVVWVRSAPRQVTKPNTIKVVRDAGLPPCPAAQDDSMGHMIITFTVAFPDELDNTEE--LLKWLPPRPSQ 359
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: A0A835ZF72_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF72_9STRA) HSP 1 Score: 303 bits (775), Expect = 1.250e-96 Identity = 163/341 (47.80%), Postives = 222/341 (65.10%), Query Frame = 1 Query: 10 YAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQSTP----DIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG-VLNV-NKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILP 1008 Y VLGV DAD +TIKKAYRKLAL HPDK GDP+KFKE++ AY+VL D +KR YD++G K G ++ H P DIF+ FFG G QS P ++VHPLRVSLEDLY G+ ++ I+RN C C G G K G PCG CNG GV R +GPG++Q+MQ+ C C G G V+N ++C C+GKK V +++ +EV+V PG ++G K F ADE P G VVFVIQ+ H+ F RKGADL++EKKLSL +SL GF F +H+DG ++ L ++ +T+H+ +VI GMPH P ++G L+V+F V +P++L + + + +LP Sbjct: 35 YKVLGVPKDADDNTIKKAYRKLALKNHPDKGGDPDKFKEISMAYDVLSDAQKRKMYDQYG----KDGVNEEGGPGH-TPDDIFSMFFGGGGRRQSGPRRGENLVHPLRVSLEDLYNGKTCRLAINRNRLCSACAGRGGKEGAERPCGACNGHGVQIQYRQIGPGMVQKMQATCSDCSGEGKVINPRDRCRECQGKKVVKERKVLEVHVTPGMKNGEKITFHEEADETPGMLPGDVVFVIQSKPHDTFQRKGADLIMEKKLSLAESLCGFDFVVQHMDGRALRLRSAPGKVTKHEHLQVIPHEGMPHAGNPYVKGRLFVLFKVVFPETLDQLAVSAIASVLP 370
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: A0A836CFV4_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV4_9STRA) HSP 1 Score: 301 bits (770), Expect = 2.560e-96 Identity = 161/362 (44.48%), Postives = 219/362 (60.50%), Query Frame = 1 Query: 7 LYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG----------------QFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVL--NVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSS--ITRHKEAKVIKGAGMPH----KDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPL 1020 LY +LGV DA+ IKKAYRKLAL HPDK+G PEKFK ++ AYEVL DPEKR YD+FG++S K F PP PD+F FFG GG +TPDI HPLRV+L+D++RG+ F+MC++RN+ C C G+G GQ C C G GV H MRA+ PG+MQRMQSMCP C G GV G + V DKQ ++V++ PGT D H+F+F+ +ADE P K+ G+VVFV+QT +H + R G +L++ K LS+ +SL GF FS H++G ++ + ++ +T+ KV+K AG+P +DK G + + F V +P L + L LPP P+ Sbjct: 4 LYTILGVEKDAEIIVIKKAYRKLALQHHPDKSGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPP------PDVFQQFFGGGFSNSSNGFPGFFATATGGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGIGVQHSMRAIAPGLMQRMQSMCPMCGGKGVCVDGDKXXXXXXGARVVADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAEGEVTKPNTIKVLKDAGLPACPTGQDKE--MGHMIITFAVAFPDRLDNADE--LLRYLPPRPV 355
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: UPI001CB9C02D (dnaJ protein homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9C02D) HSP 1 Score: 294 bits (753), Expect = 2.260e-93 Identity = 160/354 (45.20%), Postives = 213/354 (60.17%), Query Frame = 1 Query: 4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFG-GPQSTP----------DIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEPL 1020 R Y +LGV A D +KKAYRK A+ HPDK GDPEKFKEV +AYEVL DPEKR YD+ G+++LK G P F DIF FFG GP +T D+VHPL+VSLEDLY G K+ +SRN C CKG G K G CG C G G+ +R +GP ++Q+MQ C CKG G + + ++C C+G+K +K+ +EV+V G ++G K F G ADE P TG +VFV+Q +H +F RKG DL E LSL ++L GF+F H+D +++++ + + K I GMP +P M+G LY+ F VE+P+SLS EQ LE +LPP+PL Sbjct: 14 RYYEILGVPKTASQDDLKKAYRKAAIKNHPDKGGDPEKFKEVAQAYEVLSDPEKREIYDQHGEDALKEGMGSGPGGHDPF--DIFQSFFGNSPFGPSNTSSRGRRQRKGEDVVHPLKVSLEDLYNGTSKKLSLSRNKLCIKCKGKGSKSGASMTCGSCQGSGMKVSIRHLGPSMIQQMQHPCNDCKGTGEAISDKDRCPTCKGEKVTPEKKLIEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFFEHTLSLTEALCGFQFILTHLDNRQLLIKSQPGEVVKADSFKAINDEGMPMYQRPFMKGKLYIHFTVEFPESLSPEQCKMLETVLPPKPL 365
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: A0A7N0RDN5_KALFE (Uncharacterized protein n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A7N0RDN5_KALFE) HSP 1 Score: 293 bits (751), Expect = 4.120e-93 Identity = 157/350 (44.86%), Postives = 217/350 (62.00%), Query Frame = 1 Query: 4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG--QFGGPQST--------PDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVL--ENSSITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPP 1011 + Y +LGV+ A D +KKAYRK A+ HPDK GDPEKFKE+ +AYEVL DPEKR YD++G+++LK G H P DIF FFG FGG S+ D+VHPL+VSLEDLY G K+ +SRN+ C CKG G K G CG C G G+ +R +GP ++Q+MQ C CKG G + + ++C +C+G+K V +K+ +EV+V G ++G K F G ADE P TG +VFV+Q +H +F RKG DL +E LSL ++L GF+F H+DG +++ E + + + K I GMP +P M+G LY+ F V++P S++ +Q LE ILPP Sbjct: 13 KYYEILGVSKSAAQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGAGGHD-PFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYNGTSKKLSLSRNILCSKCKGKGSKSGASMTCGGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHSLSLTEALCGFQFILTHLDGRQLLIKSEPGELVKPDQFKAINNEGMPLYQRPFMKGKLYIHFSVDFPDSVTHDQAKALEAILPP 361
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: UPI00053C6EBE (dnaJ protein homolog n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C6EBE) HSP 1 Score: 293 bits (749), Expect = 8.490e-93 Identity = 157/345 (45.51%), Postives = 213/345 (61.74%), Query Frame = 1 Query: 4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFGQFGGPQST-----PDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPP 1011 R Y +LGV DA + +KKAY+K A+ HPDK GDPEKFKE+ +AYEVL DPEKR YD++G+E+LK G P F DIF+ FFG G + D+VHPL+VSLEDLY G K+ +SRNV C C G G K G C C G G+ +R +GP ++Q+MQ +C CKG G + ++C +C+G+K V +K+ +EV V G ++G K F G ADE P TG VVFVIQ +H +F RKG +L E LSL ++L GF+F H+DG ++++++ + + K I GMP +P M+G LY+ F+VE+P SLS +Q LE ILPP Sbjct: 15 RFYEILGVTKDATQEDLKKAYKKAAIKNHPDKGGDPEKFKEIAQAYEVLSDPEKREIYDQYGEEALKEGMGGSGPTIDPF--DIFSSFFGGGGSSRGRRERRGEDVVHPLKVSLEDLYLGTTKKLSLSRNVICSKCNGKGSKSGASMKCSGCQGIGMKVTVRHLGPSMIQQMQHVCNECKGTGETIDEKDRCLQCKGEKVVPEKKVLEVFVEKGMQNGQKITFPGAADEAPDTVTGDVVFVIQQKEHPKFKRKGENLFYEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSFKAIDDEGMPVHQRPFMKGKLYIHFMVEFPDSLSSDQVKALEAILPP 357
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: A0A5B7BF30_DAVIN (Putative DNAJ n=3 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BF30_DAVIN) HSP 1 Score: 291 bits (746), Expect = 2.330e-92 Identity = 160/352 (45.45%), Postives = 216/352 (61.36%), Query Frame = 1 Query: 4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG--QFGGPQST--------PDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEP 1017 + Y +LGV+ +A + +KKAYRK A+ HPDK GDPEKFKE+ +AYEVL DPEKR YD++G+++LK G M F DIF FFG FGG S+ D+VHPL+VSLEDLY G K+ +SRNV C C G G K G C C G G+ +R +GP ++Q+MQ C CKG G + ++C +C+G+K V +K+ EV V G + G K F G ADE P TG +VFV+Q +H +F RKG DL +E LSL +SL GF+F H+DG ++++++ + + + K I GMP +P MRG LY+ F VE+P+SLS EQ LE +LPP P Sbjct: 13 KYYEILGVSKNATQEDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGSGGMHDPF--DIFQSFFGGSPFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYSGISKKISLSRNVLCSKCNGKGSKSGASMKCSGCQGSGMKVSIRQLGPSMIQQMQHACNECKGTGETINERDRCPQCKGEKVVQEKKVREVIVEKGMQIGQKITFPGEADEAPDTITGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTESLCGFQFILTHLDGRQLLIKSNPGEVVKPDQYKAINEEGMPIYQRPFMRGKLYIHFTVEFPESLSPEQVKALEAVLPPRP 362
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: UPI000901935C (dnaJ protein homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI000901935C) HSP 1 Score: 290 bits (742), Expect = 9.580e-92 Identity = 154/351 (43.87%), Postives = 217/351 (61.82%), Query Frame = 1 Query: 4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG---QFGGP--------QSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPP 1011 + Y +LGV+ +A D IKKAYRK A+ HPDK GDPEKFKE+ +AYEVL DPEKR YD +G+++LK G M F DIF FFG FGG + D++HPL+VSLE++Y G K+ +SRNV C C G G K G CG C G G+ +R +GP ++Q+MQ C CKG G + + ++C +C+G K V +K+ +EV+V G ++G K F G ADE P TG +VFV+Q +H +F RKG DL ++ L+L ++L GF+F H+DG ++++++ + + + K I GMP +P M+G LY+ F+V++P SLS EQ LE ILPP Sbjct: 13 KYYDILGVSKNAGVDEIKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDEYGEDALKEGMGGGAGMHDPF--DIFQSFFGGGNPFGGXXXXXXXRQRRGEDVIHPLKVSLEEMYSGTTKKLSLSRNVICSKCNGKGSKSGSSMKCGGCEGSGMKVTIRQLGPSMIQQMQQPCNECKGTGETINDKDRCPQCKGDKVVPEKKVLEVHVEKGMQNGQKITFPGEADEAPDMITGDIVFVLQQKEHPKFKRKGDDLFVDHTLTLTEALCGFQFILTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPTYQRPFMKGKLYIHFMVDFPDSLSPEQVKALEAILPP 361
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 n=7 Tax=Caryophyllales TaxID=3524 RepID=DNJH_ATRNU) HSP 1 Score: 290 bits (741), Expect = 1.280e-91 Identity = 157/352 (44.60%), Postives = 216/352 (61.36%), Query Frame = 1 Query: 4 RLYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG--QFGGPQST--------PDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAG--VLNVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENS--SITRHKEAKVIKGAGMPHKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEP 1017 R Y +LGV DA + +KKAY+K A+ HPDK GDPEKFKE+ AYEVL DPEKR YD++G+++LK G M F DIF FFG FGG S+ D+VHPL+VSLEDL+ G K+ +SRNV C C G G K G C C G G+ +R +GP ++Q+MQ C CKG G + + ++C +C+G+K V +K+ +EV V G + G K F G ADE P TG +VFV+Q +H +F RKG DL E LSL ++L GFRF H+DG ++++++ + + + K I+ GMP +P M+G +Y+ F VE+P SL+ +Q LE ILPP+P Sbjct: 13 RYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPF--DIFQSFFGGSPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQHGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKP 362 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
BLAST of jgi.p|Trimin1|157278 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_402 ID=mRNA_402|Name=jgi.p|Trimin1|157278|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1803bp|location=Sequence derived from alignment at Contig_3:1265066..1269815+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGGAATGCCTCGAGCTACGTCGCCTGCCTCACTGCATTGGTGGCCTback to top protein sequence of jgi.p|Trimin1|157278 >Trimin1|157278|e_gw1.3.488.1 ID=Trimin1|157278|e_gw1.3.488.1|Name=jgi.p|Trimin1|157278|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=601bp MEECLELRRLPHCIGGLVALTRLGLHNCVSLKCLPGSIGNLTALKSLSLDback to top mRNA from alignment at Contig_3:1265066..1269815+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_402 ID=mRNA_402|Name=jgi.p|Trimin1|157278|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4750bp|location=Sequence derived from alignment at Contig_3:1265066..1269815+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:1265066..1269815+ >mRNA_402 ID=mRNA_402|Name=jgi.p|Trimin1|157278|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1803bp|location=Sequence derived from alignment at Contig_3:1265066..1269815+ (Tribonema minus UTEX_B_3156 )back to top |