mRNA_3850 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|160193
Unique NamemRNA_3850
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: A0A835ZF89_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF89_9STRA)

HSP 1 Score: 1117 bits (2888), Expect = 0.000e+0
Identity = 564/564 (100.00%), Postives = 564/564 (100.00%), Query Frame = 1 
Query:    1 MDSDGDVVPNKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE 1692
            MDSDGDVVPNKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE
Sbjct:    1 MDSDGDVVPNKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE 564
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: A0A6H5K3P6_9PHAE (Dihydroxy-acid dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P6_9PHAE)

HSP 1 Score: 889 bits (2296), Expect = 0.000e+0
Identity = 442/563 (78.51%), Postives = 496/563 (88.10%), Query Frame = 1 
Query:    4 DSDGDVVPNKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE 1692
            D +G V+ N++SS LTQ K QGASQAMLYATGL   DM+KAQVG+SSVWFEGNPCNMHLLDLA + K+GV +AGMVGYRFNTIGVSDGISMGT GMSFSLQSRD+IADSIETVMGGQWYD N+SIPGCDKNMPGCLIAMGR+NRP++MVYGGTIRAG       LD+VSAFQ+YGE+ YDRITE QR  +V N+CPGPGACGGMYTANTMA AIEALGMSLPYSSS PAD   K +EC +A +A++ +L+KDLKP+DIVTRASFENA+VTVMALGGSTNAVLHLIAMARAF ++L IDDFQ  S+KVPF+ADLKPSGKYVMED+Q +GG PAV+K LME GL+DGSCMTVTGKT+AENL +LPGL EGQ+IIKP+S PIK +GH+QILYGNVAP G+VAKITGKEGLTFSGVAKVYD EEDM+  L RKEI  G VVVIRYEGPKGGPGMPEMLTP+SAIMGAGLG SVALITDGRFSGGSHGFIIGHITPEAQ GGPIALL+D DPIVIDAEK+ I+VL+   +L+ RR+DWV PP  AT+GTL+KYIKNVASAS GCVTDE
Sbjct:    8 DEEGGVIMNRFSSTLTQRKSQGASQAMLYATGLTTEDMNKAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVTEAGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDVIADSIETVMGGQWYDGNISIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGKAAG-ESLDIVSAFQAYGEFAYDRITEEQRQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKDECHRAAQAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELDIDDFQTISNKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQDIIKPMSDPIKPSGHIQILYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEIKAGTVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQEGGPIALLKDDDPIVIDAEKRTISVLISSTELEKRRQDWVPPPPAATKGTLFKYIKNVASASEGCVTDE 569
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: A0A7S2V1Y3_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y3_9STRA)

HSP 1 Score: 878 bits (2269), Expect = 0.000e+0
Identity = 432/562 (76.87%), Postives = 489/562 (87.01%), Query Frame = 1 
Query:    7 SDGDVVPNKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLT-EGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTD 1689
            +D D   NKYS  +TQ K QGASQAMLYATG+ P DM+K QVGI+SVW+EGNPCNMHLLDLA  VKEGV +AGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDA +++PGCDKNMPG +IAMGRLNRP +MVYGGTIRAGCTK + KLD+VSAFQSYGEY YDRITE +R +IV N+CPGPGACGGMYTANTMA AIEALGMSLP+SSS PAD+D K +EC+ AG AIK L++K++ P+DI+TR +FENAMV +MA GGSTNAVLHLIAMA++  VDLT+DDFQK SD+VPFLADLKPSGKYVMED+  IGG PAV+K+LME GLIDGSC+T TGKTIAENL DL  L  E Q+I+ PL  PIK+TGH+ I+YGN+APEGSVAKITGKEGLTFSGVAKVYD EEDM+  ++RKEIT GMV++IRYEGPKGGPGMPEMLTPTSAIMGAGLG  VAL+TDGRFSGGSHGFIIGH+TPEAQVGGPIAL+ DGDPIVID EKK I+VL+  D +  R+  W  PPLKAT+GTLYKYIK V SAS GC+TD
Sbjct:   49 TDSDDTLNKYSKTITQPKSQGASQAMLYATGITPDDMNKPQVGIASVWYEGNPCNMHLLDLAGNVKEGVQQAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDACIALPGCDKNMPGVIIAMGRLNRPGIMVYGGTIRAGCTKNFDKLDIVSAFQSYGEYMYDRITEEERKEIVENACPGPGACGGMYTANTMASAIEALGMSLPFSSSYPADSDLKKQECIAAGAAIKELMKKNITPKDIMTRQAFENAMVVIMATGGSTNAVLHLIAMAKSVDVDLTLDDFQKVSDRVPFLADLKPSGKYVMEDLLGIGGIPAVIKYLMEEGLIDGSCITCTGKTIAENLADLDTLNFETQDIVMPLDKPIKETGHINIMYGNLAPEGSVAKITGKEGLTFSGVAKVYDSEEDMLRSMERKEITKGMVIIIRYEGPKGGPGMPEMLTPTSAIMGAGLGADVALLTDGRFSGGSHGFIIGHVTPEAQVGGPIALVEDGDPIVIDCEKKTIDVLVDDDVMAKRKAAWSPPPLKATKGTLYKYIKAVGSASEGCITD 610
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: W7TJB0_9STRA (Dihydroxy-acid dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJB0_9STRA)

HSP 1 Score: 877 bits (2267), Expect = 0.000e+0
Identity = 429/562 (76.33%), Postives = 496/562 (88.26%), Query Frame = 1 
Query:   13 GDVVPNKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDA--EKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE 1692
            G+ V NK+S  +TQ K QGASQAMLYATGLEP DM+K QVGISSVWFEGNPCNMHLL LA  VK+GVV +GMVGYRFNTIGVSDGISMGT GMSFSLQSRD+IADSIETVM GQWYDAN+++PGCDKNMPGCLIAMGRLNRP++MVYGGTIRAGC+  + KLD+VSAFQ+YGEYQY+RI E +R++I+RN+CPGPGACGGMYTANTMA A EALGM+LPYSSS PAD   K EEC +AG A++ LL+KD+KPRDI+TRA+FENAMVTVMALGGSTNAVLHLIAMARA G+ L++DDFQ  SD+VPF+ADLKPSGKYVMEDVQ+IGGTPAVMK+L+E G +DGSCMTVTGKT+AENLKDLP L+ GQ++I P+  PIK TGHLQILYGN+AP GSVAKITGKEG  FSGVA V+D EEDM+A L+RKEI  GMV+VIRYEGPKGGPGMPEMLTPTSAIMGAGLG  VALITDGRFSGGSHGF+IGH++PEAQ GGPIAL++DGDPIVIDA  +++++++L+  +++  R+  W   P  A+RGTLYKYIKNVASAS GCVTDE
Sbjct:   55 GENVLNKFSRTITQPKSQGASQAMLYATGLEPEDMAKPQVGISSVWFEGNPCNMHLLGLAEHVKKGVVASGMVGYRFNTIGVSDGISMGTSGMSFSLQSRDIIADSIETVMSGQWYDANIALPGCDKNMPGCLIAMGRLNRPSIMVYGGTIRAGCSPGHEKLDIVSAFQAYGEYQYERIDETERAEIIRNACPGPGACGGMYTANTMATAAEALGMTLPYSSSTPADDPLKREECERAGAAVRNLLEKDIKPRDIMTRAAFENAMVTVMALGGSTNAVLHLIAMARAVGIPLSLDDFQACSDRVPFIADLKPSGKYVMEDVQKIGGTPAVMKYLLEKGFLDGSCMTVTGKTMAENLKDLPSLSAGQDVILPVETPIKSTGHLQILYGNLAPGGSVAKITGKEGERFSGVAAVFDSEEDMLAALERKEIKAGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGKDVALITDGRFSGGSHGFVIGHVSPEAQEGGPIALIQDGDPIVIDAHADQRRMDLLISDEEMAKRKAAWKPRPYPASRGTLYKYIKNVASASEGCVTDE 616
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: A0A6U0VBG4_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VBG4_9STRA)

HSP 1 Score: 868 bits (2243), Expect = 2.630e-313
Identity = 431/554 (77.80%), Postives = 484/554 (87.36%), Query Frame = 1 
Query:   28 NKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTD 1689
            NKYSS +TQ K QGASQAML+ATGLEP DMSKAQ+GISSVW+EGNPCNMHL+DLA  VKEGV  AG+V YRFNT+GVSDGISMGT GM FSLQSRDLIADSIETVMGGQWYDAN+++PGCDKNMPG ++AMGRLNRP +MVYGGTIRAG +    KLD+VSAFQSYGE  Y+RITE +R+DIVRNSCPGPGACGGMYTANTMA AIEA+GMSLPYSSS PA+   KL+EC +AG AIK LL+ DLKPRDI+TR +FENA+V VMA GGSTNAVLHLIAMA + G+++T DDFQ+ SDKVPFLADLKPSG+YVMEDVQ IGGTPAVMKFLME G IDGSCMTVTGKTIAENL DLPGL+ GQ+II+PLS PIK TGH+QILYGNVA EGSVAKITGKEGL FSG+AKV+D E+DM+A ++RKEI  G V+V+RY+GPKGGPGMPEML PTSAIMGAGLG   ALITDGRFSGGSHGFIIGH+TPEAQVGG IALL+DGDPIVIDAE K I+V +  ++L  RR  W APPLK T+GTLYKY K VASA+ GCVTD
Sbjct:   54 NKYSSTITQPKSQGASQAMLFATGLEPPDMSKAQIGISSVWYEGNPCNMHLMDLAQAVKEGVAAAGLVPYRFNTVGVSDGISMGTPGMRFSLQSRDLIADSIETVMGGQWYDANIALPGCDKNMPGTIMAMGRLNRPGIMVYGGTIRAGKSSTGAKLDIVSAFQSYGEAVYERITEEERADIVRNSCPGPGACGGMYTANTMATAIEAMGMSLPYSSSTPAEDPLKLDECRRAGAAIKTLLEMDLKPRDIMTRQAFENAIVMVMATGGSTNAVLHLIAMAHSVGIEVTQDDFQRISDKVPFLADLKPSGQYVMEDVQGIGGTPAVMKFLMEEGFIDGSCMTVTGKTIAENLADLPGLSPGQDIIRPLSDPIKSTGHIQILYGNVATEGSVAKITGKEGLRFSGIAKVFDTEDDMIAAVERKEIGKGTVIVLRYQGPKGGPGMPEMLKPTSAIMGAGLGADTALITDGRFSGGSHGFIIGHVTPEAQVGGTIALLQDGDPIVIDAESKAIDVHVNDEELARRRSQWTAPPLKYTQGTLYKYSKLVASAARGCVTD 607
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: A0A1P8WFD7_9PLAN (Dihydroxy-acid dehydratase n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WFD7_9PLAN)

HSP 1 Score: 862 bits (2228), Expect = 7.880e-312
Identity = 420/555 (75.68%), Postives = 482/555 (86.85%), Query Frame = 1 
Query:   28 NKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE 1692
            NKYSS +TQ + QGASQAMLYATG+ P DM+KAQVGISSVW+EGN CNMHLLDLAAKVKEG+  AG++G RFNTIGVSDGISMGT+GMS+SLQSRDLIADSIETVMGGQWYDAN+S+PGCDKNMPGC+IAMGRLNRP+LMVYGGTIRAGCT +  KLD+VSAFQSYG+Y  + I + +R +IVR SCPG GACGGMYTANTM+ AIEA+GMSLPYSSS+PA+  +KL+EC  AG AIK+LL+KD+KPRDI+TR +FENAMVTVMALGGSTNAVLHLIAMAR+  V LT+DDFQK SD+VPF+ADLKPSG++VMED+  +GGTPAV+K+L+E   I G CMTVTGKT+ ENL DL GL EGQEII+P+  PIK TGHL+IL GNVAPEGSVAKITGKEGL FSG A+ YD EEDM+ GL+  EI  G VV+IRYEGPKGGPGMPEMLTPTSAI+GAGLGD VAL+TDGRFSGGSHGFI+GHITPEAQVGGPI LL++GD + +DAE  +INV L ++   +RRK W APP KATRGTLYKYIK V SAS GCVTDE
Sbjct:    5 NKYSSRITQPRSQGASQAMLYATGMSPEDMNKAQVGISSVWYEGNSCNMHLLDLAAKVKEGIEAAGLIGLRFNTIGVSDGISMGTEGMSYSLQSRDLIADSIETVMGGQWYDANISLPGCDKNMPGCIIAMGRLNRPSLMVYGGTIRAGCTAKGDKLDIVSAFQSYGQYLAESINDDERKEIVRKSCPGAGACGGMYTANTMSSAIEAMGMSLPYSSSIPAEDPDKLKECFNAGAAIKVLLEKDIKPRDIMTREAFENAMVTVMALGGSTNAVLHLIAMARSVDVPLTLDDFQKVSDRVPFIADLKPSGRFVMEDLHSVGGTPAVLKYLLEKNYITGDCMTVTGKTLGENLADLDGLAEGQEIIQPIEKPIKATGHLRILRGNVAPEGSVAKITGKEGLKFSGPARCYDSEEDMLKGLENNEIQKGDVVIIRYEGPKGGPGMPEMLTPTSAIIGAGLGDHVALMTDGRFSGGSHGFIVGHITPEAQVGGPIGLLQNGDIVTVDAEANEINVNLSEEDFASRRKSWTAPPYKATRGTLYKYIKTVKSASEGCVTDE 559
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: A0A7S0QPU2_9CRYP (Dihydroxy-acid dehydratase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPU2_9CRYP)

HSP 1 Score: 858 bits (2218), Expect = 3.370e-309
Identity = 426/558 (76.34%), Postives = 487/558 (87.28%), Query Frame = 1 
Query:   28 NKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEY--PKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEK--KQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTD 1689
            NKYS  LTQNK QGASQAML+ATGL+P D+ KAQ+GISSVW+EGNPCNMHLLDLAA+VK+GV  AG+VGYRFNTIGVSDGISMGTDGMSFSLQSRD+IADSIETVMG QWYD N+++PGCDKNMPG ++AM RLNRP+LMVYGGTIRAG       P LD+VSAFQSYGEY+Y +ITE +R +IV+ SCPGPGACGGMYTANTMA AIEALGMSLPYSSSMPAD+ EK +EC  AG A++ LL+ DLKPRDI+TR +FENAMV VMA GGSTNAVLHLIAMAR+ G+ LTIDDFQK SD+VPF+AD+KPSGKYVMEDVQ +GGTPA+MK+L+E G +D S MTVTGKTI ENLKDLPGLT GQ +I P+ APIKKTGHLQIL+GN+APEGSVAKITGKEG TFSG A VYD EEDM+A L RKEIT GMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLG+ VALITDGRFSGG+HGF IGH+TPEAQ GGPIAL+++GDPI IDA    +++ VL+  +++  R+  W APPLKAT+GTLYKYIK+V+ AS+GCVTD
Sbjct:   70 NKYSKKLTQNKSQGASQAMLFATGLKPEDLDKAQIGISSVWYEGNPCNMHLLDLAAEVKKGVEDAGLVGYRFNTIGVSDGISMGTDGMSFSLQSRDIIADSIETVMGAQWYDGNIALPGCDKNMPGTIMAMARLNRPSLMVYGGTIRAGSAPGIGRPVLDIVSAFQSYGEYEYGKITEAERLEIVQKSCPGPGACGGMYTANTMATAIEALGMSLPYSSSMPADSSEKRKECRDAGAAVRKLLELDLKPRDIMTRQAFENAMVMVMATGGSTNAVLHLIAMARSCGITLTIDDFQKVSDRVPFIADMKPSGKYVMEDVQGVGGTPALMKYLVEKGYMDDSQMTVTGKTIRENLKDLPGLTAGQMVILPVEAPIKKTGHLQILFGNIAPEGSVAKITGKEGETFSGTAAVYDSEEDMLAALARKEITAGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGNDVALITDGRFSGGTHGFCIGHVTPEAQDGGPIALIKNGDPIQIDARSAVRKMEVLVSPEEMAKRKAAWKAPPLKATQGTLYKYIKSVSPASLGCVTD 627
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: A0A2G6P9P7_9CHLR (Dihydroxy-acid dehydratase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2G6P9P7_9CHLR)

HSP 1 Score: 855 bits (2208), Expect = 8.720e-309
Identity = 416/555 (74.95%), Postives = 488/555 (87.93%), Query Frame = 1 
Query:   28 NKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE 1692
            N+YSS +TQ K QGASQAMLYATG++P+DM KAQVGI+S+W+EGN CNMHLLDLAAKVKEGV +A ++G RFNTIGVSDGI+MGT+GMSFSLQSRDLIADSIET+MG QWYDA V++PGCDKNMPGC++AM RL+RPA+MVYGGTI+AGCT ++ KLD+VSAFQSYGEY    ITE  R +IV+++CPG GACGGMYTANTMA AIEALGMSLPYS+S PA++DEKL+ECV+AG+AI+ILL+ ++KP DI+TRA+FENA+V VMALGGSTNAVLHLIAM+RA GV+LTIDDFQ  SD+VP LADLKPSGKYVMEDV  IGGTPA+MK+L+E G ++GSC+TVTGKTIAENL +LPGLTEGQ+I++PL  PIK+TGHLQIL GN+APEG+VAKITGKEGL F+G A+VYD EEDM+ GL+  EI  G V+VIRYEGPKGGPGMPEMLTPTSAIMGAGLG  VAL+TDGRFSGGSHGFI+GH+TPEAQ GGPIAL++ GDPI IDA+   IN+ +   +L AR K+W  PP KA RGTLYKYIKNV SAS GCVTDE
Sbjct:    5 NQYSSRITQRKSQGASQAMLYATGMQPADMDKAQVGIASMWYEGNSCNMHLLDLAAKVKEGVSEANLIGMRFNTIGVSDGIAMGTEGMSFSLQSRDLIADSIETLMGAQWYDALVALPGCDKNMPGCIMAMARLDRPAIMVYGGTIKAGCTPQHDKLDIVSAFQSYGEYIAGTITEEARQEIVQHACPGAGACGGMYTANTMASAIEALGMSLPYSASYPAESDEKLDECVRAGKAIRILLENNIKPSDIMTRAAFENAIVVVMALGGSTNAVLHLIAMSRAVGVNLTIDDFQAVSDRVPLLADLKPSGKYVMEDVHHIGGTPAIMKYLLENGYLNGSCLTVTGKTIAENLAELPGLTEGQDIVQPLDKPIKETGHLQILRGNLAPEGAVAKITGKEGLIFTGTARVYDSEEDMLTGLENGEIKKGDVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGKDVALMTDGRFSGGSHGFIVGHVTPEAQEGGPIALVQTGDPITIDAQNNTINMDVSDSELAARLKNWEMPPYKANRGTLYKYIKNVKSASEGCVTDE 559
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: A0A7S2WBW2_9STRA (Dihydroxy-acid dehydratase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBW2_9STRA)

HSP 1 Score: 855 bits (2210), Expect = 9.440e-309
Identity = 423/557 (75.94%), Postives = 484/557 (86.89%), Query Frame = 1 
Query:   28 NKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQ--INVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE 1692
            NKYSS LTQ K QGASQAMLYATGL+  DM KAQVGI+SVWFEGNPCNMHLLDLA  VK GV  +G+VG+ FNTIGVSDGISMGTDGMSFSLQSRD+IADS+ETVMGGQWYD  +++PGCDKNMPGCLIAMGRLNRPA+MVYGGTIRAG + ++ +LD+VSAFQSYGE+ YDRITE +R+ IVRNSCPGPGACGGMYTANTMA AIEALGMSLPYSSS PAD   K EEC +A +A+  LL+ DLKPRDI+++ SFENA+ TVMALGGSTNAVLHLIAMARA  V +T+DDFQ+ SD  PF+ADLKPSGKYVMED+ ++GGTPAV+K+L+E GL+ G CMTVTGKT+AEN+KDL  L  GQE+I PL+ PIK +GHLQILYGN+APEGSVAKITGKEG  FSGVAKVYD EE M+ GL+ KEITPGMV+VIRYEGPKGGPGMPEMLTPTSAIMGAGLG  VALITDGRFSGGSHGF+IGH+TPEAQVGGP+AL++DGDPIVIDA   +  I +++  ++L  R+  W APPL A RGTL+KYIKNVASAS+GCVTDE
Sbjct:   24 NKYSSRLTQPKSQGASQAMLYATGLKEGDMKKAQVGIASVWFEGNPCNMHLLDLAKTVKGGVQDSGLVGFCFNTIGVSDGISMGTDGMSFSLQSRDIIADSVETVMGGQWYDGLIALPGCDKNMPGCLIAMGRLNRPAIMVYGGTIRAGKSPQHEQLDIVSAFQSYGEFVYDRITEEERATIVRNSCPGPGACGGMYTANTMATAIEALGMSLPYSSSTPADDPGKQEECERAAKAMYRLLELDLKPRDIMSKESFENAITTVMALGGSTNAVLHLIAMARAVDVPITLDDFQRISDATPFIADLKPSGKYVMEDIHKVGGTPAVLKYLLENGLLHGDCMTVTGKTLAENVKDLDPLAPGQEVIVPLANPIKPSGHLQILYGNMAPEGSVAKITGKEGERFSGVAKVYDKEEAMLEGLNNKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGKDVALITDGRFSGGSHGFVIGHVTPEAQVGGPLALVQDGDPIVIDARSSERTITLMVDDEELARRKAAWTAPPLPAKRGTLFKYIKNVASASLGCVTDE 580
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BLAST of jgi.p|Trimin1|160193 vs. uniprot
Match: A0A3B9D0I6_9PLAN (Dihydroxy-acid dehydratase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9D0I6_9PLAN)

HSP 1 Score: 852 bits (2202), Expect = 7.690e-308
Identity = 414/555 (74.59%), Postives = 485/555 (87.39%), Query Frame = 1 
Query:   28 NKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE 1692
            NK+SS +TQ   QGASQAMLYATGL+P D++K QVGISSVW+EGNPCNMHLLDLAAKVKEGV  AG++G RFNTIGVSDG+SMGT+GMSFSLQSRDLIADSIETVMGGQWYDAN+S+PGCDKNMPGC++AMGR+NRP++MVYGGTIRAGC  +  KLD+VSAFQSYG+Y  + ITE +R+ IVR SCPG GACGGMYTANTMA AIE LGMSLPYSSS+PA+   KLEEC  AG AI++LL+KD+KPRDI+TR +FENAMV VMALGGSTNAVLHLIAMARA  VDLTIDDFQ  SD++P++ADLKPSG++VMED+ +IGGTPAV+K+L+E GL+ G CMTVTGKT++EN+ DLPGL+EGQEII+P+  PIK TGHL++L GNVA EG++AKITGKEGL F+G A+ YD EEDM+ GL+ KEI  G VV+IRYEGP+GGPGMPEMLTPTSAIMGAGLG  VAL+TDGRFSGGSHGFI+GHITPEAQVGG IAL+++GD + +DAE  +INV L  ++L +RR+ W APP KATRGTLYKYIK V SAS GCVTDE
Sbjct:    7 NKFSSRITQPPSQGASQAMLYATGLQPDDLNKGQVGISSVWYEGNPCNMHLLDLAAKVKEGVDAAGLLGMRFNTIGVSDGMSMGTEGMSFSLQSRDLIADSIETVMGGQWYDANISLPGCDKNMPGCVMAMGRVNRPSIMVYGGTIRAGCGLDGAKLDIVSAFQSYGQYLAESITEEERAGIVRKSCPGAGACGGMYTANTMASAIETLGMSLPYSSSIPAEDPGKLEECFAAGAAIRVLLEKDIKPRDIMTRDAFENAMVVVMALGGSTNAVLHLIAMARAVEVDLTIDDFQAVSDRIPYIADLKPSGRFVMEDLHEIGGTPAVLKYLLEKGLLKGDCMTVTGKTLSENVADLPGLSEGQEIIQPVEQPIKATGHLRVLRGNVATEGAIAKITGKEGLVFNGPARCYDSEEDMLKGLEDKEIQKGDVVIIRYEGPQGGPGMPEMLTPTSAIMGAGLGSDVALMTDGRFSGGSHGFIVGHITPEAQVGGTIALIQNGDQVTVDAESNEINVDLTDEELQSRRQQWEAPPFKATRGTLYKYIKTVKSASEGCVTDE 561
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160193 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF89_9STRA0.000e+0100.00Dihydroxy-acid dehydratase n=1 Tax=Tribonema minus... [more]
A0A6H5K3P6_9PHAE0.000e+078.51Dihydroxy-acid dehydratase n=1 Tax=Ectocarpus sp. ... [more]
A0A7S2V1Y3_9STRA0.000e+076.87Dihydroxy-acid dehydratase n=1 Tax=Fibrocapsa japo... [more]
W7TJB0_9STRA0.000e+076.33Dihydroxy-acid dehydratase n=2 Tax=Monodopsidaceae... [more]
A0A6U0VBG4_9STRA2.630e-31377.80Dihydroxy-acid dehydratase n=1 Tax=Pinguiococcus p... [more]
A0A1P8WFD7_9PLAN7.880e-31275.68Dihydroxy-acid dehydratase n=1 Tax=Fuerstiella mar... [more]
A0A7S0QPU2_9CRYP3.370e-30976.34Dihydroxy-acid dehydratase n=1 Tax=Cryptomonas cur... [more]
A0A2G6P9P7_9CHLR8.720e-30974.95Dihydroxy-acid dehydratase n=1 Tax=Chloroflexi bac... [more]
A0A7S2WBW2_9STRA9.440e-30975.94Dihydroxy-acid dehydratase n=2 Tax=Rhizochromulina... [more]
A0A3B9D0I6_9PLAN7.690e-30874.59Dihydroxy-acid dehydratase n=1 Tax=Planctomycetace... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:1523952..1530252 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|160193|e_gw1.12.126.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00468,RC01714
KEGG ReactionR01209,R04441,R05070
KEGG ModuleM00019,M00570
KEGG Pathwayko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG koko:K01687
EC4.2.1.9
GOsGO:0003674,GO:0003824,GO:0004160,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009507,GO:0009532,GO:0009536,GO:0009553,GO:0009555,GO:0009570,GO:0009628,GO:0009651,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0022622,GO:0032501,GO:0032502,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0050896,GO:0071704,GO:0099402,GO:1901564,GO:1901566,GO:1901576
Descriptiondihydroxy-acid dehydratase activity
COG categoryEG
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0129@1|root,KOG2448@2759|Eukaryota
Evalue6.42e-308
Seed ortholog55529.EKX37411
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDihydroxy-acid dehydratase, N-termnial part
Ec32 orthologEc-03_000220.1
TranscriptId160515
TrackFilteredModels1
ProteinId160193
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160193gene_3850Tribonema minus UTEX_B_3156 geneContig_12 1523952..1530252 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160193Trimin1|160193|e_gw1.12.126.1Tribonema minus UTEX_B_3156 polypeptideContig_12 1523952..1530252 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3850_1exon_3850_1Tribonema minus UTEX_B_3156 exonContig_12 1523952..1524056 +
exon_3850_2exon_3850_2Tribonema minus UTEX_B_3156 exonContig_12 1524282..1524374 +
exon_3850_3exon_3850_3Tribonema minus UTEX_B_3156 exonContig_12 1524982..1525230 +
exon_3850_4exon_3850_4Tribonema minus UTEX_B_3156 exonContig_12 1525505..1525576 +
exon_3850_5exon_3850_5Tribonema minus UTEX_B_3156 exonContig_12 1526051..1526245 +
exon_3850_6exon_3850_6Tribonema minus UTEX_B_3156 exonContig_12 1526768..1526962 +
exon_3850_7exon_3850_7Tribonema minus UTEX_B_3156 exonContig_12 1527255..1527353 +
exon_3850_8exon_3850_8Tribonema minus UTEX_B_3156 exonContig_12 1527718..1527870 +
exon_3850_9exon_3850_9Tribonema minus UTEX_B_3156 exonContig_12 1528261..1528584 +
exon_3850_10exon_3850_10Tribonema minus UTEX_B_3156 exonContig_12 1529333..1529467 +
exon_3850_11exon_3850_11Tribonema minus UTEX_B_3156 exonContig_12 1530178..1530252 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3850CDS_3850Tribonema minus UTEX_B_3156 CDSContig_12 1523952..1524056 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3850 ID=mRNA_3850|Name=jgi.p|Trimin1|160193|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1695bp|location=Sequence derived from alignment at Contig_12:1523952..1530252+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAGCGATGGCGATGTTGTGCCCAACAAATACTCCAGCATCCTCAC
CCAAAACAAGATCCAGGGTGCATCACAGGCCATGCTATACGCCACTGGGC
TTGAGCCCTCAGACATGAGCAAGGCACAGGTCGGCATCTCATCCGTCTGG
TTCGAGGGCAATCCCTGCAACATGCATCTGCTGGACCTTGCTGCGAAGGT
CAAGGAGGGCGTGGTGAAGGCGGGCATGGTGGGGTACCGCTTCAACACCA
TTGGCGTGTCGGACGGCATCTCCATGGGCACCGACGGCATGAGCTTCTCG
CTGCAGAGCCGCGACCTCATTGCGGACTCCATCGAGACGGTCATGGGGGG
GCAGTGGTACGACGCCAACGTGTCCATCCCCGGCTGCGACAAGAACATGC
CCGGGTGCCTGATCGCGATGGGCCGCCTCAACAGGCCCGCGCTCATGGTG
TACGGCGGGACCATACGGGCGGGCTGCACAAAGGAATACCCAAAGCTTGA
TGTGGTCAGCGCCTTCCAGTCATACGGCGAGTACCAATACGACCGCATCA
CGGAGGGGCAGCGCAGCGACATTGTCAGGAACTCGTGCCCTGGCCCCGGT
GCCTGCGGCGGCATGTACACCGCCAACACCATGGCGGTGGCCATTGAGGC
CCTGGGCATGTCTCTGCCATACTCATCCTCCATGCCCGCTGACACGGACG
AGAAGCTGGAGGAGTGCGTGAAGGCTGGCGAAGCCATCAAGATCCTGCTG
CAGAAGGACCTCAAGCCCAGGGACATTGTGACGCGCGCCTCCTTTGAGAA
CGCCATGGTCACCGTCATGGCGCTGGGCGGATCCACCAATGCGGTGCTGC
ACCTGATTGCCATGGCGCGGGCGTTTGGCGTTGACCTGACCATCGATGAC
TTCCAGAAGACCTCGGACAAGGTGCCATTCCTGGCGGACCTGAAGCCCTC
TGGCAAGTACGTGATGGAGGATGTGCAGCAGATTGGAGGAACCCCCGCTG
TCATGAAGTTCCTTATGGAAGCCGGCCTGATTGACGGGTCGTGCATGACG
GTGACTGGCAAGACCATTGCGGAGAACCTGAAGGACCTGCCTGGACTTAC
TGAGGGGCAGGAGATCATCAAGCCGCTCAGCGCCCCTATCAAGAAGACTG
GACATCTCCAGATCCTGTACGGCAACGTCGCCCCCGAGGGCTCCGTGGCC
AAGATCACCGGCAAGGAGGGCCTCACGTTCTCCGGCGTTGCCAAGGTCTA
CGACTGCGAGGAGGACATGATGGCGGGCCTGGACCGCAAGGAGATCACGC
CGGGGATGGTGGTGGTGATACGGTACGAGGGACCCAAGGGCGGACCCGGC
ATGCCAGAGATGCTCACTCCCACGAGCGCCATCATGGGGGCGGGGCTGGG
GGACTCCGTGGCGCTGATAACCGACGGCCGGTTCTCGGGGGGTTCGCACG
GGTTCATCATCGGGCACATCACTCCTGAGGCGCAGGTGGGCGGCCCCATT
GCCCTTCTGCGTGACGGCGACCCGATAGTGATTGACGCAGAGAAGAAGCA
GATCAACGTGCTCCTCAAGCAGGACCAGCTGGATGCTCGCCGGAAGGACT
GGGTGGCGCCCCCCCTTAAGGCAACACGCGGCACGCTTTACAAGTACATC
AAGAACGTGGCCAGCGCTAGCGTGGGCTGCGTGACTGATGAATAG
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protein sequence of jgi.p|Trimin1|160193

>Trimin1|160193|e_gw1.12.126.1 ID=Trimin1|160193|e_gw1.12.126.1|Name=jgi.p|Trimin1|160193|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=565bp
MDSDGDVVPNKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVW
FEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFS
LQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMV
YGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPG
ACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILL
QKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDD
FQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMT
VTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVA
KITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPG
MPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPI
ALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYI
KNVASASVGCVTDE*
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mRNA from alignment at Contig_12:1523952..1530252+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3850 ID=mRNA_3850|Name=jgi.p|Trimin1|160193|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6301bp|location=Sequence derived from alignment at Contig_12:1523952..1530252+ (Tribonema minus UTEX_B_3156 )
ATGGACAGCGATGGCGATGTTGTGCCCAACAAATACTCCAGCATCCTCAC
CCAAAACAAGATCCAGGGTGCATCACAGGCCATGCTATACGCCACTGGGC
TTGAGGTGAGATGAGTGAAGCAAAACAGGATCGCATCTTGTGAAATGTAC
ACACTGCACACAGCTGCGCTTGCTGCGACCACGACAAAGTATAATAGTGT
ATTGTCTGCATTGCAACCTGTATAAATTGCCTATGCAGCATTACTTTGCG
CTCACATGTTGCATGCACATCGCAGATCCATAATCTCGTCAGCGACTGTG
CTGCTGCATGGTGTGTCTGCTGGTGCGTAGCCCTCAGACATGAGCAAGGC
ACAGGTCGGCATCTCATCCGTCTGGTTCGAGGGCAATCCCTGCAACATGC
ATCTGCTGGACCTTGCTGCGAAGGTGAGAAGTGCCTTTGCTACTGTTCGG
TACTGCTTTGCGTTACGAAACAATCACCTTGAAACTGAGCAATGAAGCCT
GGTAGCTTTAACATGGCAACACGTGGTCTTGTGTTCTGCTACTGCCTTTT
TGTCAAGCACTAATATGCTGCTGCTGCTGTGCCAGATGTATAGACTATGA
TGTTGCTCATTGGTGTCTGATTACCAATGCAATAATACATTTAGAGTTCC
TGTTGGTCGACTTACGCTATCATAGCAACAGGATTCCCCCTACTGCATGG
TTCAAGCTGTGTGGGTTCTGTGCATAGCTGCATTGTGCAATGCGGCTGGT
ACCATCAGGACACGGTTCTTTGCATGCTTTTTGCGCTGTCTGCGGACGCC
TCTGAGAATAAAAGCAACATGACTTGGTCTACCAGCCGATCACCAGTGCA
ACATTCATCTCATATGATGCAATTGGAGTGCAATCAATGCTGCCGGTTGT
ACCCATGTCTTGTGCCGCAATCAGCATGTCAGTACAAGCACATGCAACAT
GTGGGGGGGGGGGGGGGGGCATGCGGGAAGGTCTAGCGCGTGTGCCTGCG
CACTCACGCCCTGCGTCTCTCCGACTGCAGGTCAAGGAGGGCGTGGTGAA
GGCGGGCATGGTGGGGTACCGCTTCAACACCATTGGCGTGTCGGACGGCA
TCTCCATGGGCACCGACGGCATGAGCTTCTCGCTGCAGAGCCGCGACCTC
ATTGCGGACTCCATCGAGACGGTCATGGGGGGGCAGTGGTACGACGCCAA
CGTGTCCATCCCCGGCTGCGACAAGAACATGCCCGGGTGCCTGATCGCGA
TGGGCCGCCTCAACAGGCCCGCGCTCATGGTACGGAAGTGCACCAAGTAG
CTTTGCTTCGTGAACGACAGTTGCTGAAATGAGCTGCTGCGCGCAAGTGT
GTTATGTTGCATCACTGCGCCTGGAGTCTCAATTCTACATTCCTATGCGC
TATCAGCCAGCATTGCTCTGCAAATGGCCATCGCCGAATGTGCTACTTGT
TGCACCGTGGTGCTCTGTATATGCTCCTGATGTCTGCTGAATGGTGCGTT
GGCGCTAACCGTGCAGCGCATCATTGCTCTCATTGATGCTTCTACCTGCA
CAGGTGTACGGCGGGACCATACGGGCGGGCTGCACAAAGGAATACCCAAA
GCTTGATGTGGTCAGCGCCTTCCAGGTCAGAGGCGTTCCTCAGACCGCTC
TTTCATGCAGCAGAGCTGTTTTCGTCAAAGCCCGATACAATTTGCTGGTT
TGACAAACATGTCAGAGAATTGATTGGCCTTAGATTCCCTTTGACTAGAT
GCGTTCTGATCATGTTGCTTGTAGCAATGCGTGCGCAGCAGACGCCGCCG
TCGAAGCATCCAATGCTTTGCTGCTGCGCAAGGTGGTTGCGCTATTGGTA
TTTACCTGCTGTGCTGCGTGCATTCTTGTTGCAAGGCCCGCAACGAGCGG
TCGTATGCTATGACCGCGCAACTCTTGCCGGAGGTCATCGCCAGCAATCA
CACCGAGTCACTTGCTGCAAGGGTGTGTGACGCTCATTTCAACACGGCGC
AGCATCTCAGTTGTACGGCCATATTAACATTGCCTTCACGTCTCATTTCG
GCCATACGGCGAGTATATACCAATATTGCCTTCCCCGTCTGCATTCCAGT
CATACGGCGAGTACCAATACGACCGCATCACGGAGGGGCAGCGCAGCGAC
ATTGTCAGGAACTCGTGCCCTGGCCCCGGTGCCTGCGGCGGCATGTACAC
CGCCAACACCATGGCGGTGGCCATTGAGGCCCTGGGCATGTCTCTGCCAT
ACTCATCCTCCATGCCCGCTGACACGGACGAGAAGCTGGAGGAGGTACGT
ATACTTGTATGTATACATTCCCACATACATACATGGCGCAACCTGATGCG
ATCATCCAGATCTCATGGTGGTGCCAGGTGCATTGCACTTCCATTGCGTG
CTTCTGGCTGTGTGGTCTGTTGGCACATGATTGCAAGTGCAATAGGCATG
CCGCAGACAGTCATTGTGGCTCTCAGAGCTTCATCGGTGGTGTATATCCA
CATGTTATGTGCCACACACAACCAAGGGCAATGCCTGCATGTCTTTGAAG
TTCAACCCTTATGCACATGACCCATTGATTTCCTGGTCTATATTGCATCA
GCTCTGTGGCTGTATACCTCATTCATCATGCATGATCGGTGTGGCTCGTG
CTTACGACATACTGTCATGTTTATCACTACCCAAGTCTCCACAGCAGCCA
TAATTGTGTCTTGTCTGGTTCAACTTGTACCCTGAAACACACATCGGCAT
GTGCAGCAGCTCAGCTGGGTTTGCGCTCAAGGACGCCGCATGCTTCGTCT
GCTCTGCCACTTGCAGTGCGTGAAGGCTGGCGAAGCCATCAAGATCCTGC
TGCAGAAGGACCTCAAGCCCAGGGACATTGTGACGCGCGCCTCCTTTGAG
AACGCCATGGTCACCGTCATGGCGCTGGGCGGATCCACCAATGCGGTGCT
GCACCTGATTGCCATGGCGCGGGCGTTTGGCGTTGACCTGACCATCGATG
ACTTCCAGAAGGTGATTGTTGCTGTAGTTGGGGGCAAACTGATGCGCTGT
GTGGCTTGTTTGTGTGTTGACATTACAGCAGGTTGCGGCTCGTGATGGCA
ATGGCGATGTAGCAGGGCGCGGCGCACAACTGCAGTGCTGATGTCAAAAT
TTCAATCGCCACCAATGTGCCTTAGAGACCATTGTAACCTGGTAAGGTTG
CATGTGAAGCCAGTATGTTGCACGTAGCGTGCAGCTCAATTCTCATGGTC
CTGCCCTACGTGTGACCCCTGCTGTCATCTGCATGCCCTGCGCTCTCTTT
CAGACCTCGGACAAGGTGCCATTCCTGGCGGACCTGAAGCCCTCTGGCAA
GTACGTGATGGAGGATGTGCAGCAGATTGGAGGAACCCCCGCTGTCATGA
AGGTATGCATGCTGCGCAGTCTGGGCCCATGCATGCACACGTGATGCGCT
CTCCGCAATTGTCCATGCGTGCGGCAGTACTAGTGAAGGCCACGTGTTGA
CATGGGTCTCTGCATGATGCAGAGACATTTCTTCAATGTTGATCACACGC
ATGCCGCTCACTTGCATGGACATTTGTGGCAAGTCACTCACTTGCATAAC
CATTCGTGGCAAGTTAAACTTTTGACGTCACCAACAACTTCTGTTGCAGT
CAGTCTCTATCATCTGTGTGGCAACAGCAGTGTGGCAATGCATGTGTCAT
AGCAGTGCATGCGGCAGCAACTCAAATAACATGGCGCTGAATGCCTGTCT
TGCCTGCGTGTTGCAGTTCCTTATGGAAGCCGGCCTGATTGACGGGTCGT
GCATGACGGTGACTGGCAAGACCATTGCGGAGAACCTGAAGGACCTGCCT
GGACTTACTGAGGGGCAGGAGATCATCAAGCCGCTCAGCGCCCCTATCAA
GAAGACTGGACATCTCCAGGTGCGCCACACACACATGTCATGTGTTGCCG
TTGTATAGAGTCTACACCATGTGCTACAGTGCACTGCCTGGTATGTATGG
TGTGTATGTATGGTGTGTGTGGGTTGGTTTGTGATACCTGTCTGTTTGTG
TAGTGTCTGTGGCGTGGCTCATAAACATCGCAAGCATTCAGACTACCATT
ACAGTAACTTGTGTGCAAGCACTAGCGTATTGGGTTGAGCATTAATGTAT
GGCACAAGGTAGTTTGCGCGGTGCCGGTTGCCTCATGCAGATGGAATGCC
ATGTCCAGAAGCTGATCATTGTGATCATGCAAACACCTCATTATGCTTGT
CACCTGCCCCTCAAAGTATGTCATGTGCCACTACCTCCCCCCCCGCCCAC
TTCCCCCAGATCCTGTACGGCAACGTCGCCCCCGAGGGCTCCGTGGCCAA
GATCACCGGCAAGGAGGGCCTCACGTTCTCCGGCGTTGCCAAGGTCTACG
ACTGCGAGGAGGACATGATGGCGGGCCTGGACCGCAAGGAGATCACGCCG
GGGATGGTGGTGGTGATACGGTACGAGGGACCCAAGGGCGGACCCGGCAT
GCCAGAGATGCTCACTCCCACGAGCGCCATCATGGGGGCGGGGCTGGGGG
ACTCCGTGGCGCTGATAACCGACGGCCGGTTCTCGGGGGGTTCGCACGGG
TTCATCATCGGGCACATCACTCCTGAGGCGCAGGTAACGGCGGTCTGCCT
TGTGAATTTTGCAGTCTATGATCATATTGCGCTGGTGCTGCGCGCTGTGT
TCGTACGGCCCATATGCGTCTGCTAGGGCATTCAGTCTGATGGTGCTGCT
TGACGATCAACTTGTGCACGCTTCGTCGCAAGCTGCCACCGCTGTTGTTG
CTGCATCTGGGTGATTTGCTCCAGGCCACACGAATGCACAACTACTACTA
AGGAACTGTCACTGCCGCAATCAATAGCACTTGGTCTTGGTGGTTTTGGG
GCACATTATGCCCACAGCATTTACCTCAGCATGTACTTCAACATATACTT
CAAAGTACTTTATTGATAAGTAGTGAATGCTCGAAATACGGTGCATGTGC
TCGCGTGTACATCTTGCAGTAGGGCTTCTCAATCTAAAGTGTGCTCTGAA
GTTCTGAGCAAAGGCGGTCAGAGACTGAGGTCTTGCAGTTTACAAACTCG
CGATTACATGTAATCTGCTGTTGTTGCACCCTCAACGCCTGTTGGCGTTT
CAGGTGTCCCTAGGGTGTACTGTCAGGCATAGGGGCTCTGTGGGATAGCT
CCAGTCAGCTTCATGAGGACTCGCAATGGGATAATTTGAGTGACTGCTTC
ACTGCGTGCCTCATTCAGGTGCCCCACAATGCATAACGCGGAGCACGCTT
GATGCAAGGTGCTGTGTTTGCACACTGTGGTGCTGTGACATTATTAATGT
GGTTGTGGATGTTTTTGGTGTGCTGTGGCAGGTGGGCGGCCCCATTGCCC
TTCTGCGTGACGGCGACCCGATAGTGATTGACGCAGAGAAGAAGCAGATC
AACGTGCTCCTCAAGCAGGACCAGCTGGATGCTCGCCGGAAGGACTGGGT
GGCGCCCCCCCTTAAGGTGCGGAGCTTTCTTAGGGCGCATCGCCAGTGAT
GGTGTTTGTATGTAGCATCAAGATGGTGTCCAGCCCACTGTCGCGCTCTT
GCGCCTGATGCGGTGATTGTCACAACATGTTGTTTCTCTCTTCACATGCA
CACGCAAATGTGCCTCGCAGTCAGCGCGAATATCGCCTAGCGCAGTAGGG
TGCTTCAGCATGTGCGGCTGTAATGAATGCTTTTGCAAGGATCATCGTGC
AGTTGTGACCTGCGGCGGAAGTGCAGTGCGGTCAGGATGCCTGGCGTATG
TTGCTGATGTTGTGGTTCACATTAGCGCAGAGCGTGTATTGCATTTCCAG
GCGCGCGTGGTTGCCGAGCTGCACAGGCTGAGTTGCAAGGCTGTGTATGT
GTAGTAGTGCACCTGCCTCATTGGTTGTAACTTTTTGCAATCGCACAATA
CTGCGATTATCGACCAGCAGGGGTGACTCTCTCGCTCTCTCTGCAGTTGC
CTGCGCACAGCAAGCATCAGCAGACCTGGAGTTTTGAAATCCTGATAAAG
CTCTCTGTAAATTCCATATGGCTGGCATATAGGATGCCTCGTCAAAGTGT
ACTACATTGACACGCAGTCGGCATGTGGATGTCTTTAGTACCTTTCATGT
CTTGTGTATGTATGGTGCCGCTGCAGTGCGAGCAACGGCTGATGTTTGTT
CGCACCGTTTTTTCATTGCGCCACAGGCAACACGCGGCACGCTTTACAAG
TACATCAAGAACGTGGCCAGCGCTAGCGTGGGCTGCGTGACTGATGAATA
G
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Coding sequence (CDS) from alignment at Contig_12:1523952..1530252+

>mRNA_3850 ID=mRNA_3850|Name=jgi.p|Trimin1|160193|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1695bp|location=Sequence derived from alignment at Contig_12:1523952..1530252+ (Tribonema minus UTEX_B_3156 )
ATGGACAGCGATGGCGATGTTGTGCCCAACAAATACTCCAGCATCCTCAC
CCAAAACAAGATCCAGGGTGCATCACAGGCCATGCTATACGCCACTGGGC
TTGAGCCCTCAGACATGAGCAAGGCACAGGTCGGCATCTCATCCGTCTGG
TTCGAGGGCAATCCCTGCAACATGCATCTGCTGGACCTTGCTGCGAAGGT
CAAGGAGGGCGTGGTGAAGGCGGGCATGGTGGGGTACCGCTTCAACACCA
TTGGCGTGTCGGACGGCATCTCCATGGGCACCGACGGCATGAGCTTCTCG
CTGCAGAGCCGCGACCTCATTGCGGACTCCATCGAGACGGTCATGGGGGG
GCAGTGGTACGACGCCAACGTGTCCATCCCCGGCTGCGACAAGAACATGC
CCGGGTGCCTGATCGCGATGGGCCGCCTCAACAGGCCCGCGCTCATGGTG
TACGGCGGGACCATACGGGCGGGCTGCACAAAGGAATACCCAAAGCTTGA
TGTGGTCAGCGCCTTCCAGTCATACGGCGAGTACCAATACGACCGCATCA
CGGAGGGGCAGCGCAGCGACATTGTCAGGAACTCGTGCCCTGGCCCCGGT
GCCTGCGGCGGCATGTACACCGCCAACACCATGGCGGTGGCCATTGAGGC
CCTGGGCATGTCTCTGCCATACTCATCCTCCATGCCCGCTGACACGGACG
AGAAGCTGGAGGAGTGCGTGAAGGCTGGCGAAGCCATCAAGATCCTGCTG
CAGAAGGACCTCAAGCCCAGGGACATTGTGACGCGCGCCTCCTTTGAGAA
CGCCATGGTCACCGTCATGGCGCTGGGCGGATCCACCAATGCGGTGCTGC
ACCTGATTGCCATGGCGCGGGCGTTTGGCGTTGACCTGACCATCGATGAC
TTCCAGAAGACCTCGGACAAGGTGCCATTCCTGGCGGACCTGAAGCCCTC
TGGCAAGTACGTGATGGAGGATGTGCAGCAGATTGGAGGAACCCCCGCTG
TCATGAAGTTCCTTATGGAAGCCGGCCTGATTGACGGGTCGTGCATGACG
GTGACTGGCAAGACCATTGCGGAGAACCTGAAGGACCTGCCTGGACTTAC
TGAGGGGCAGGAGATCATCAAGCCGCTCAGCGCCCCTATCAAGAAGACTG
GACATCTCCAGATCCTGTACGGCAACGTCGCCCCCGAGGGCTCCGTGGCC
AAGATCACCGGCAAGGAGGGCCTCACGTTCTCCGGCGTTGCCAAGGTCTA
CGACTGCGAGGAGGACATGATGGCGGGCCTGGACCGCAAGGAGATCACGC
CGGGGATGGTGGTGGTGATACGGTACGAGGGACCCAAGGGCGGACCCGGC
ATGCCAGAGATGCTCACTCCCACGAGCGCCATCATGGGGGCGGGGCTGGG
GGACTCCGTGGCGCTGATAACCGACGGCCGGTTCTCGGGGGGTTCGCACG
GGTTCATCATCGGGCACATCACTCCTGAGGCGCAGGTGGGCGGCCCCATT
GCCCTTCTGCGTGACGGCGACCCGATAGTGATTGACGCAGAGAAGAAGCA
GATCAACGTGCTCCTCAAGCAGGACCAGCTGGATGCTCGCCGGAAGGACT
GGGTGGCGCCCCCCCTTAAGGCAACACGCGGCACGCTTTACAAGTACATC
AAGAACGTGGCCAGCGCTAGCGTGGGCTGCGTGACTGATGAATAG
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