mRNA_3811 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347495
Unique Name	mRNA_3811
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A835ZEZ5_9STRA (Glutamate [NMDA] receptor-associated protein 1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ5_9STRA)

HSP 1 Score: 577 bits (1486), Expect = 8.710e-205
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 3

Query:   69 MPVLRPEDLGPDGNPIRADNGKPAVANPGAPDAYAYGYPQQLEAPYKEYANQAYAGTYTQGDIESGTVPPQNTAAAAGLDPAIARKIRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFILMAGSSR 953
            MPVLRPEDLGPDGNPIRADNGKPAVANPGAPDAYAYGYPQQLEAPYKEYANQAYAGTYTQGDIESGTVPPQNTAAAAGLDPAIARKIRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFILMAGSSR
Sbjct:    1 MPVLRPEDLGPDGNPIRADNGKPAVANPGAPDAYAYGYPQQLEAPYKEYANQAYAGTYTQGDIESGTVPPQNTAAAAGLDPAIARKIRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFILMAGSSR 295

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A835ZDG7_9STRA (Inhibitor of apoptosis-promoting Bax1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDG7_9STRA)

HSP 1 Score: 198 bits (503), Expect = 8.640e-57
Identity = 117/238 (49.16%), Postives = 149/238 (62.61%), Query Frame = 3

Query:  240 YTQGDIESGTVPPQNTAAAAGLDPAIARKIRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFILMAGSSR 953
            Y   D+ESG   P      AG D    +++R GF+RKVY +L LQL LTCGVCA+F FVDPVRNYML + WPF+ +   GL +L  MF  +  HP N+VLLTA+TL +SV+VGT  A++AS  AG +VV ALF+T+ +F  LTLFT Q+KIDFSF+GA L                               IFSLYIL+ TS+IM++L PD+++LA I LYLD +NLF FIL   S R
Sbjct:   28 YKYQDVESGL--PTAPGYVAGFDRE--KELRRGFIRKVYTVLSLQLMLTCGVCAIFTFVDPVRNYMLSHMWPFYTSMFGGLAVLFLMFCYQNVHPTNIVLLTAWTLMESVLVGTVVASYASAGAGGAVVNALFLTLTIFAGLTLFTFQSKIDFSFLGAALFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFSLYILFDTSLIMNRLSPDDWVLACISLYLDIINLFLFILQLTSRR 261

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: D7G9C6_ECTSI (Homologue of a Golgi anti-apoptotic protein identified from vaccinia virus. Transmembrane BAX inhi n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9C6_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.090e-50
Identity = 105/212 (49.53%), Postives = 139/212 (65.57%), Query Frame = 3

Query:  300 GLDPAIARKIRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFIL 935
            G    I + +R GF+RKVY IL +QL LT  V AV +  D VR  +L N W  WV F   + LL  +   R  +P N+ LL A+T  ++  VG  CAA+AS   G  VV A  +TMAVF  LTLFT QTKIDFSF+G  L  ++ +L+LWG++ ++FG +  ++Y+L G+IIFSLYILY TS++M+ L  DEYI+A I LYLD LNLF +IL
Sbjct:   58 GSTAEIEKALRLGFIRKVYGILSIQLLLTAAVAAVCVLNDNVRTGILGNLWTVWVGFFFSIGLLLCLMCYRDKYPLNMYLLGAWTFVEAYTVGVVCAAYASQGQGTIVVQAAGLTMAVFLGLTLFTFQTKIDFSFLGGALFASIWVLMLWGVVMSVFGFQQSYLYSLFGAIIFSLYILYDTSLLMNHLGYDEYIVASISLYLDILNLFLYIL 269

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A7S2UZ05_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ05_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.990e-50
Identity = 102/209 (48.80%), Postives = 141/209 (67.46%), Query Frame = 3

Query:  327 IRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFILMAGSSR 953
            +R GF+RKVY IL  QL LT  + A+FM   P  +++L N W +WV  ++  VLL  +F  +  HP N+ LLTA+T   S  VG  CAA+ +   G+ V+ A+ +T+ VF  LT+FT+Q+K DFSF+GAGL C L +L++WG +AAIF + G F+YA+ G+IIFSLYI++ T +I  KL  D+YILA + LYLD +NLF FIL   S R
Sbjct:   43 LRKGFIRKVYGILSFQLFLTTALSALFMLYQPALHWVLTNTWMYWVTLVLSFVLLFALFCFKDKHPTNMYLLTAWTACMSYGVGLICAAYQATGQGKIVLEAVGLTLTVFLGLTVFTMQSKWDFSFLGAGLYCCLWILIVWGFVAAIFHV-GEFMYAVFGAIIFSLYIVFDTWLITQKLGYDDYILAAVNLYLDIINLFLFILQILSKR 250

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A7S2ETN0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ETN0_TRICV)

HSP 1 Score: 178 bits (452), Expect = 4.780e-48
Identity = 96/206 (46.60%), Postives = 143/206 (69.42%), Query Frame = 3

Query:  321 RKIRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNW-WPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFIL 935
            RKIRH FLRKVY IL  Q+ LT G+CA+     P + Y+L+N  W  +++  +  V+L  + A + ++P N+VLL  +TL ++ +VGT  A +A      +V+ A+F+T  VF  L+LFTLQ+K DFSFMGAGLG  L++L+ W ++  +FG + G++YALIG+I+FS Y+++ T +I  +L P++YI+AVI LYLD +NLF FIL
Sbjct:  153 RKIRHAFLRKVYSILSAQMLLTFGICALMTLHKPTQAYVLENGGWLLYLSIALSFVILFMLLANKNNYPTNIVLLGIWTLAEAYLVGTVTAVYAYAGNTGTVLEAVFLTGLVFVGLSLFTLQSKWDFSFMGAGLGMCLMVLVFWSILGMVFGFQTGYIYALIGTIVFSGYVIFDTYMISERLDPEDYIIAVIELYLDIINLFLFIL 358

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A7S0QHF3_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHF3_9CRYP)

HSP 1 Score: 172 bits (437), Expect = 4.250e-47
Identity = 101/205 (49.27%), Postives = 135/205 (65.85%), Query Frame = 3

Query:  321 RKIRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFIL 935
            ++I+ GFL KVY IL  QLA T   CA+FM V+P+R  +L N W   V FIV +VL+  +F  + S+P N+ LL  FT+ ++ +VGT CAA+A    G+ V  A  IT+ VF  LT+F   + IDFSF+G  L   LL+ + WGL A IFGLK G++YA IG+++FS YI+Y T  IM+ L  DE+I+A I LYLD LNLF  IL
Sbjct:   47 KEIQKGFLLKVYGILSAQLAFTVAFCALFMAVEPLRTLVLGNVWIVIVLFIVTIVLIIALFFLKNSYPWNIYLLAGFTVAEAWLVGTVCAAYAQAGVGELVAIAWAITLFVFVGLTIFVAYSDIDFSFLGLFLPVCLLVFVFWGLTAMIFGLKLGYIYAAIGALLFSAYIIYDTFNIMNNLGCDEHIIASIELYLDVLNLFLMIL 251

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A7S4N752_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N752_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.060e-46
Identity = 102/244 (41.80%), Postives = 150/244 (61.48%), Query Frame = 3

Query:  240 YTQGDIESGTVPPQNTAAAAG------LDPAIA------RKIRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFIL 935
            Y   DIE+  +    T  ++       L P +A      ++ R  F+R+VY IL +Q+ +T G+CA  +   P + Y+L + WP   + I+ LVL+  +   +  HP N++LL  FT+ +SV+VGT  AA+ +      V+ A+F+T AVF  LT+FT Q++IDFSF+GA L   L +LL+WGL AAIFGL  G+ YAL G +IF  YIL+ T ++M KL P EY+LA + LYLD +NLF ++L
Sbjct:   54 YEDDDIEALPIATATTPISSASTESIPLAPVVAVLGFEDKETRMTFIRRVYSILAVQMLVTGGICAFMILHLPTQQYVLTHAWPINTSAIISLVLIVALGCYKTVHPHNIILLALFTIVESVLVGTVTAAYCASGYTGVVLEAVFLTCAVFVGLTVFTFQSRIDFSFLGASLYMGLGVLLVWGLCAAIFGLYDGYYYALFGCVIFCGYILFDTWMLMEKLKPQEYVLAAVSLYLDIINLFLYML 297

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A7S2H7L4_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H7L4_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.200e-45
Identity = 100/231 (43.29%), Postives = 146/231 (63.20%), Query Frame = 3

Query:  246 QGDIESGTVPPQNTAAAAGLDPAIARKIRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWP-FWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFIL 935
            +G+ + G     +  A+A +D    R+IRH F+RKVY IL  Q+ LT GVCAV     P++ Y+L+   P +W + +V  V L  +F  ++ +P N +LL  FTL  S  VG   A + +     +++ A+FIT  VF  LT+FTLQ+K DFSF+GAGLG  L +LLLW ++  IFG + G+VYAL GS++FS YI++ T ++  +  P +Y++A I LYLD +NLF FIL
Sbjct:  114 EGEYQEGV---HHVIASAEVDD---RQIRHAFIRKVYLILAAQMLLTFGVCAVMPLQKPLQTYVLEQGMPLYWASVLVLFVSLFALFVYKREYPINFLLLGVFTLAMSYSVGMITAMYDAAGYSGTIIEAVFITATVFLVLTIFTLQSKWDFSFLGAGLGMGLWILLLWSILGIIFGFQTGYVYALAGSVLFSGYIIFDTYMLAERHDPQDYVVAAIELYLDIVNLFLFIL 338

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: B8CB69_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB69_THAPS)

HSP 1 Score: 166 bits (419), Expect = 3.990e-45
Identity = 94/203 (46.31%), Postives = 134/203 (66.01%), Query Frame = 3

Query:  330 RHGFLRKVYCILMLQLALTCGVCAVFMFVD-PVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFIL 935
            R  F+RKVY IL +QL LT GV + FM +  P + Y+L + WP  ++ +  + L+  +   +  HP N+ LL  FT+ ++ +VGTT  A+ +      V+ A+F+T A+F  LTLFT Q+KIDFSF+GA L   L  L+LWGL A +FG++ G+ YALIG I+FS YIL+ T +IM +L P EY+LA IMLYLD +N F ++L
Sbjct:    3 RRLFIRKVYSILSVQLVLT-GVVSTFMAMHVPTQIYVLTHGWPVTLSMVTSIALIVALMCYKDKHPENMYLLATFTIVEAFLVGTTTTAYCAAGYEGVVLEAVFLTGAIFIGLTLFTFQSKIDFSFLGAALSMGLGALILWGLFAMLFGVQTGYAYALIGCILFSGYILFDTWLIMDRLSPSEYVLAAIMLYLDIINFFLYLL 204

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A7S0J9C2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J9C2_9EUKA)

HSP 1 Score: 162 bits (411), Expect = 4.260e-43
Identity = 95/205 (46.34%), Postives = 134/205 (65.37%), Query Frame = 3

Query:  327 IRHGFLRKVYCILMLQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKSHPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALTLFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGG--FVYALIGSIIFSLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFIL 935
            +R GFLRKVY IL +QL +T    A+FMF +  R+++L     F+ A I  +VLL  +   R SHP NL+LL+AFTL ++  VG  CA + +   G  V+ AL +T AVF +LT + L TK DFS++G GL   L +L+LWG++   F    G   V++L+G+++FS YILY TS I+H+L PD+YI A I LYLD +NLF ++L
Sbjct:   60 VRAGFLRKVYSILSIQLLVTAAGAALFMFHEGARSFVLSTPAMFYAALIAPIVLLLMLGCYRSSHPTNLILLSAFTLCEAYTVGVVCAVYYASGLGLVVLQALLLTGAVFLSLTAYVLTTKKDFSWLGGGLFAVLCILMLWGILNMFFDFGSGAHLVFSLVGALLFSGYILYDTSEILHRLGPDDYIEATISLYLDIINLFLYLL 264

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A836C8P7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P7_9STRA)

HSP 1 Score: 1377 bits (3565), Expect = 0.000e+0
Identity = 713/713 (100.00%), Postives = 713/713 (100.00%), Query Frame = 2

Query:   86 MFRSGRCWCLIWLAGAHVVGAQRVPKATPAPTVAETLAPENCKFTQTVCKGIGAAAGFTGDIGAVSAVNKGILCCNPDHKCEQDSFGAPRCVLNVGEEICDSGDITLKDLRSASPQDSQISVPLPLFSSVSGISNTPAPTKEFEASLTSSAPFFKQFDKSEDGKFSRVYSPLVYAKCNTTETTCVRKTFAGVGTAVYCMNIADAKAKPCDFGFKKVVCKPNAECVKDPQDEGHCLPTKGANSVKMCTNGLKGKDGRYTICKSEATCAVSSSKVPVPLCIGDGFKLCDGGGPKPNICLSSEKCVIDKNKNGQCLKKDQFLCDAGTPKGAVAVCDGXXXXXXXXXXXXXXXXXXXXXXXXXFAIGTASSSSSTFNDAQDGVLYCDTNKSQNCLIQLKTNSPTCLNTAASKTACRDDNLNFSCGSGFKCNKSTGACEATQNYGVAPDQLQGAAFSAGANLAATALAALLATLALFEALAKNTERYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRGPDCGKAASQAHVWVNPHAGERLPALLLLLLWGM 2224
            MFRSGRCWCLIWLAGAHVVGAQRVPKATPAPTVAETLAPENCKFTQTVCKGIGAAAGFTGDIGAVSAVNKGILCCNPDHKCEQDSFGAPRCVLNVGEEICDSGDITLKDLRSASPQDSQISVPLPLFSSVSGISNTPAPTKEFEASLTSSAPFFKQFDKSEDGKFSRVYSPLVYAKCNTTETTCVRKTFAGVGTAVYCMNIADAKAKPCDFGFKKVVCKPNAECVKDPQDEGHCLPTKGANSVKMCTNGLKGKDGRYTICKSEATCAVSSSKVPVPLCIGDGFKLCDGGGPKPNICLSSEKCVIDKNKNGQCLKKDQFLCDAGTPKGAVAVCDGXXXXXXXXXXXXXXXXXXXXXXXXXFAIGTASSSSSTFNDAQDGVLYCDTNKSQNCLIQLKTNSPTCLNTAASKTACRDDNLNFSCGSGFKCNKSTGACEATQNYGVAPDQLQGAAFSAGANLAATALAALLATLALFEALAKNTERYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRGPDCGKAASQAHVWVNPHAGERLPALLLLLLWGM
Sbjct:    1 MFRSGRCWCLIWLAGAHVVGAQRVPKATPAPTVAETLAPENCKFTQTVCKGIGAAAGFTGDIGAVSAVNKGILCCNPDHKCEQDSFGAPRCVLNVGEEICDSGDITLKDLRSASPQDSQISVPLPLFSSVSGISNTPAPTKEFEASLTSSAPFFKQFDKSEDGKFSRVYSPLVYAKCNTTETTCVRKTFAGVGTAVYCMNIADAKAKPCDFGFKKVVCKPNAECVKDPQDEGHCLPTKGANSVKMCTNGLKGKDGRYTICKSEATCAVSSSKVPVPLCIGDGFKLCDGGGPKPNICLSSEKCVIDKNKNGQCLKKDQFLCDAGTPKGAVAVCDGXXXXXXXXXXXXXXXXXXXXXXXXXFAIGTASSSSSTFNDAQDGVLYCDTNKSQNCLIQLKTNSPTCLNTAASKTACRDDNLNFSCGSGFKCNKSTGACEATQNYGVAPDQLQGAAFSAGANLAATALAALLATLALFEALAKNTERYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRGPDCGKAASQAHVWVNPHAGERLPALLLLLLWGM 713

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A836CHE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE2_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 4.850e-151
Identity = 223/229 (97.38%), Postives = 226/229 (98.69%), Query Frame = 2

Query: 1496 LFEALAKNTERYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRGPDCGKAASQAHVWVNPHAG 2182
            LFEALAKN+ERYFERCTRRDPQFQAAEAQF E+TSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARP VPVEVR NVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRGPDCGKAASQAHVWV+PHAG
Sbjct:    8 LFEALAKNSERYFERCTRRDPQFQAAEAQFTEQTSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPDVPVEVRRNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRGPDCGKAASQAHVWVDPHAG 236

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A835Z5K2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K2_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 2.190e-142
Identity = 220/228 (96.49%), Postives = 224/228 (98.25%), Query Frame = 2

Query: 1499 FEALAKNTERYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRGPDCGKAASQAHVWVNPHAG 2182
            FEALAKN++RYFERC RRDPQFQAAEAQF E+TSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDE+RTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPA F RGPDCGKAASQAHVWVNPHAG
Sbjct:  519 FEALAKNSQRYFERCNRRDPQFQAAEAQFTEQTSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEYRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAAFRRGPDCGKAASQAHVWVNPHAG 746

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BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A835YQ26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ26_9STRA)

HSP 1 Score: 357 bits (917), Expect = 1.420e-112
Identity = 181/198 (91.41%), Postives = 188/198 (94.95%), Query Frame = 2

Query: 1499 FEALAKNTERYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLL 2092
            F+ALAKN+ERYFE+CTRRDPQFQ AEA F E+TSLRRPGVAVAANYAAVTYDTLSVRTRHY TWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVV F KAEFGSGSRGPI RKRLIRHLACLAA+VLTDE+RTSITCPQDRAPLHRLALGSRVFRCANA PGVPVEVRCNVGAI+ DHAGADNILMCG AMLL
Sbjct:  257 FDALAKNSERYFEKCTRRDPQFQEAEALFTEQTSLRRPGVAVAANYAAVTYDTLSVRTRHYCTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVPFRKAEFGSGSRGPIQRKRLIRHLACLAAMVLTDEYRTSITCPQDRAPLHRLALGSRVFRCANATPGVPVEVRCNVGAINCDHAGADNILMCGAAMLL 454

[Close]

BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A835Z192_9STRA (FAD-binding PCMH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z192_9STRA)

HSP 1 Score: 360 bits (924), Expect = 1.790e-109
Identity = 182/191 (95.29%), Postives = 184/191 (96.34%), Query Frame = 2

Query: 1526 RYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGG 2098
            RYFERCTRRDPQFQ AEAQF E+TSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRA ERAVARVARDIIGPRDTGVHRVVFFGKA+ GSGS GPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLA GSRVFRCANARPGVPV VRCNVGAIDRDHAGADNILMCGVAMLLGG
Sbjct:  226 RYFERCTRRDPQFQEAEAQFTEQTSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRACERAVARVARDIIGPRDTGVHRVVFFGKAKCGSGSLGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLAWGSRVFRCANARPGVPVVVRCNVGAIDRDHAGADNILMCGVAMLLGG 416

[Close]

BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A836CHH2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH2_9STRA)

HSP 1 Score: 304 bits (778), Expect = 1.050e-95
Identity = 163/234 (69.66%), Postives = 173/234 (73.93%), Query Frame = 2

Query: 1481 LATLALFEALAKNTERYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRGPDCGKAASQAHVWVNPHAG 2182
            + +L  FEALAKN++RYFE+CTRRDPQFQAAEA F E+TSLRRPGVAVAANY AV YDTLSV TR+Y TWERRMRSFNSYRARERAVA                      AEF +GSRGPIPRKRLIRHLACLAAVVL DE+RTSITCPQDR PLHR+ALG R                    AIDRDHAGADNILMCGVAMLL GV P EFCRGP CGK ASQAHVWVNP AG
Sbjct:    1 MCSLPSFEALAKNSKRYFEKCTRRDPQFQAAEAMFMEQTSLRRPGVAVAANYVAVPYDTLSVHTRYYCTWERRMRSFNSYRARERAVA---------------------SAEFRNGSRGPIPRKRLIRHLACLAAVVLNDEYRTSITCPQDRTPLHRIALGVR--------------------AIDRDHAGADNILMCGVAMLLWGVHPPEFCRGPGCGKEASQAHVWVNPRAG 193

[Close]

BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A835YQT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT5_9STRA)

HSP 1 Score: 307 bits (786), Expect = 4.030e-88
Identity = 159/210 (75.71%), Postives = 177/210 (84.29%), Query Frame = 2

Query: 1499 FEALAKNTERYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRGP 2128
            +EALAKN++RY++ C +RDPQ  AAE  F  ETSLRRPG A AANYA VTY TLSVR RHY +  RR+R+F++YRARERAVA VARDI+GP D  V +VVFFGKAEFGSGSRGPIPRKRLIRHLA LA VVLT+E RTSITCPQDRAPLHRLALGSRVF CANARP VPVE +CNV AIDRDH+GA NI+MCGV  +L GVRP EFCRGP
Sbjct:  162 YEALAKNSQRYWKMCRKRDPQLDAAENLFTPETSLRRPG-APAANYATVTYQTLSVRARHYLSHTRRIRTFDAYRARERAVAWVARDILGPPDPSVRKVVFFGKAEFGSGSRGPIPRKRLIRHLASLAPVVLTNEHRTSITCPQDRAPLHRLALGSRVFCCANARPEVPVESQCNVRAIDRDHSGAANIVMCGVEEMLYGVRPPEFCRGP 370

[Close]

BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A835Z8K6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K6_9STRA)

HSP 1 Score: 270 bits (690), Expect = 3.990e-82
Identity = 144/195 (73.85%), Postives = 156/195 (80.00%), Query Frame = 2

Query: 1541 CTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFCRG 2125
            C ++DPQ  AAE  F   TSLR+PG A AANYA VTY TLSVR RHY T   R+ +F++YRARERAVARVARDI+GP D  V +VVFFGKAEFGSGSRGP+PRKRLIRHLACLA VVL DEFRTSITCPQDRAPL R ALGSRVF C N+   VP E RCNV AIDRDHAGADNI MCGV  +L GVRP EFCRG
Sbjct:    2 CRKQDPQMDAAEQLFTPATSLRKPG-APAANYATVTYQTLSVRARHYHT--SRILTFDAYRARERAVARVARDILGPPDPSVRKVVFFGKAEFGSGSRGPMPRKRLIRHLACLAPVVLGDEFRTSITCPQDRAPLRRSALGSRVFCCVNSGLDVPEESRCNVKAIDRDHAGADNIDMCGVMAMLYGVRPPEFCRG 193

[Close]

BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A836CCS7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS7_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.550e-60
Identity = 114/180 (63.33%), Postives = 134/180 (74.44%), Query Frame = 2

Query: 1580 QFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDRAPLHRLALGSRVFRCANARPGVPVEVRCNVGAIDRDHAGADNILMCGVAMLLGGVRPAEFC 2119
            +F   ++  RPG +  ++Y  VTY TL +R RH+ + ERRMR+  +Y ARERAVAR ARDIIGPRD  V RVVFFGKAEFGSGSRGPIP KRLIR ++CL    LTDE+ TS+TCPQDRAPLHR A+GSRVF CANARP    + +CNV AIDRDHAG  NILMCGVA L   + P + C
Sbjct:    7 KFNSRSNEHRPGAS--SDYDVVTYQTLVLRARHHCSCERRMRTTTAYHARERAVARAARDIIGPRDPTVRRVVFFGKAEFGSGSRGPIPCKRLIRQISCLVLAALTDEYCTSMTCPQDRAPLHRSAMGSRVFCCANARPE---DAQCNVHAIDRDHAGTVNILMCGVA-LNRALPPQQHC 180

[Close]

BLAST of jgi.p|Trimin1|347495 vs. uniprot
Match: A0A835YPN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN9_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.770e-57
Identity = 105/146 (71.92%), Postives = 116/146 (79.45%), Query Frame = 2

Query: 1499 FEALAKNTERYFERCTRRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLAAVVLTDEFRTSITCPQDR 1936
            FEALAK + RYFE+C +R  QF+AA+A F EE SLRRPG A  AN+AAVT   L +RTRH+ TWERRMRSFN+YR RERAVARVARDIIGPR   V  V FFGKAEFGSGSR PIPRKR IRHLACL   VLTDE R+S TCP+DR
Sbjct:   36 FEALAKKSRRYFEKCAKRAQQFRAAKALFTEEASLRRPGPATTANFAAVTDSMLFMRTRHHCTWERRMRSFNTYRGRERAVARVARDIIGPRKPQVRHVTFFGKAEFGSGSRNPIPRKRFIRHLACLEPTVLTDELRSSSTCPKDR 181

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347495 vs. uniprot
BLAST of jgi.p|Trimin1|347495 vs. uniprot

BLAST of jgi.p|Trimin1|347495 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZEZ5_9STRA	8.710e-205	100.00	Glutamate [NMDA] receptor-associated protein 1-lik...	[more]
A0A835ZDG7_9STRA	8.640e-57	49.16	Inhibitor of apoptosis-promoting Bax1-domain-conta...	[more]
D7G9C6_ECTSI	1.090e-50	49.53	Homologue of a Golgi anti-apoptotic protein identi...	[more]
A0A7S2UZ05_9STRA	1.990e-50	48.80	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2ETN0_TRICV	4.780e-48	46.60	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A7S0QHF3_9CRYP	4.250e-47	49.27	Hypothetical protein n=1 Tax=Cryptomonas curvata T...	[more]
A0A7S4N752_9STRA	3.060e-46	41.80	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S2H7L4_9STRA	1.200e-45	43.29	Hypothetical protein n=2 Tax=Helicotheca tamesis T...	[more]
B8CB69_THAPS	3.990e-45	46.31	Uncharacterized protein (Fragment) n=1 Tax=Thalass...	[more]
A0A7S0J9C2_9EUKA	4.260e-43	46.34	Hypothetical protein n=1 Tax=Calcidiscus leptoporu...	[more]

Pages

BLAST of jgi.p|Trimin1|347495 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24


Match Name	E-value	Identity	Description
A0A836C8P7_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CHE2_9STRA	4.850e-151	97.38	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z5K2_9STRA	2.190e-142	96.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQ26_9STRA	1.420e-112	91.41	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z192_9STRA	1.790e-109	95.29	FAD-binding PCMH-type domain-containing protein n=...	[more]
A0A836CHH2_9STRA	1.050e-95	69.66	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQT5_9STRA	4.030e-88	75.71	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z8K6_9STRA	3.990e-82	73.85	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCS7_9STRA	2.550e-60	63.33	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835YPN9_9STRA	1.770e-57	71.92	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_12	contig	Contig_12:1209002..1216047 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347495\|estExt_Genemark1.C_Ctg_120137
BRITE	ko00000
KEGG ko	ko:K06890
GOs	GO:0000139,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0006915,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008219,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0010941,GO:0012501,GO:0012505,GO:0016020,GO:0016021,GO:0019722,GO:0019932,GO:0023051,GO:0023052,GO:0030176,GO:0030968,GO:0031090,GO:0031224,GO:0031227,GO:0031984,GO:0033554,GO:0034620,GO:0034976,GO:0035556,GO:0035966,GO:0035967,GO:0042175,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050848,GO:0050896,GO:0051716,GO:0060548,GO:0065007,GO:0070887,GO:0071310,GO:0098588,GO:0098791,GO:0098827,GO:1902531
Preferred name	TMBIM4
Description	negative regulation of Fas signaling pathway
COG category	A
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG0670@1\|root,KOG2322@2759\|Eukaryota
Evalue	4.75e-53
Seed ortholog	2880.D7G9C6
Hectar predicted targeting category	other localisation
TranscriptId	347817
Track	FilteredModels1
ProteinId	347495

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347495	gene_3811	Tribonema minus UTEX_B_3156	gene	Contig_12 1209002..1216047 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347495	Trimin1\|347495\|estExt_Genemark1.C_Ctg_120137	Tribonema minus UTEX_B_3156	polypeptide	Contig_12 1209070..1215593 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3811_1	exon_3811_1	Tribonema minus UTEX_B_3156	exon	Contig_12 1209002..1209210 +
exon_3811_2	exon_3811_2	Tribonema minus UTEX_B_3156	exon	Contig_12 1210226..1210352 +
exon_3811_3	exon_3811_3	Tribonema minus UTEX_B_3156	exon	Contig_12 1210956..1211094 +
exon_3811_4	exon_3811_4	Tribonema minus UTEX_B_3156	exon	Contig_12 1212071..1212236 +
exon_3811_5	exon_3811_5	Tribonema minus UTEX_B_3156	exon	Contig_12 1212908..1213017 +
exon_3811_6	exon_3811_6	Tribonema minus UTEX_B_3156	exon	Contig_12 1213502..1213545 +
exon_3811_7	exon_3811_7	Tribonema minus UTEX_B_3156	exon	Contig_12 1214697..1214832 +
exon_3811_8	exon_3811_8	Tribonema minus UTEX_B_3156	exon	Contig_12 1215569..1216047 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_3811	UTR5_3811	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_12 1209002..1209069 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3811	CDS_3811	Tribonema minus UTEX_B_3156	CDS	Contig_12 1209070..1209210 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_3811	UTR3_3811	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_12 1215594..1216047 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_12:1209002..1216047+
coding sequence from alignment at Contig_12:1209002..1216047+

spliced messenger RNA

>mRNA_3811 ID=mRNA_3811|Name=jgi.p|Trimin1|347495|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1410bp|location=Sequence derived from alignment at Contig_12:1209002..1216047+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCCACGCAGGTGTGCGTCGGGTGCGCGTGCAGCAGCAGGACAGCAATCC
TGGTGCACGTGATTCAGGATGCCGGTGTTGAGGCCAGAAGACCTCGGTCC
CGACGGGAACCCCATCAGAGCGGACAATGGCAAACCAGCTGTTGCTAATC
CAGGAGCACCAGACGCTTATGCTTATGGCTATCCACAGCAGCTGGAAGCT
CCGTACAAGGAGTACGCCAACCAGGCGTATGCGGGCACCTACACGCAGGG
CGACATAGAGTCGGGCACGGTGCCGCCGCAGAACACGGCAGCCGCGGCCG
GCCTCGACCCTGCCATCGCGCGCAAAATACGCCACGGGTTCCTGCGCAAG
GTGTACTGCATACTGATGCTGCAGCTGGCGCTGACGTGCGGCGTGTGCGC
CGTCTTCATGTTTGTCGACCCCGTGCGCAACTACATGCTCGACAACTGGT
GGCCGTTCTGGGTCGCCTTCATTGTGGGCCTGGTCCTCCTGTGCGGCATG
TTCGCCAAGCGCAAGTCGCACCCCGCGAACCTCGTGCTGCTCACGGCCTT
CACGCTCACGCAGTCGGTGATCGTTGGCACCACGTGCGCCGCGTTCGCCA
GCTACGACGCGGGGCAGTCGGTCGTCACCGCGCTCTTCATCACCATGGCT
GTCTTTGGTGCCCTGACGCTCTTTACTCTTCAAACAAAGATTGACTTCTC
ATTCATGGGCGCTGGATTGGGATGTGCGCTCCTGATGCTGCTCCTCTGGG
GGCTCATCGCAGCAATCTTTGGGCTTAAAGGGGGTTTTGTTTACGCGCTG
ATTGGCAGCATCATCTTTTCACTGTATATCCTGTACCACACGTCGGTCAT
CATGCACAAGCTGCCGCCGGATGAGTACATCCTGGCGGTTATCATGCTCT
ACCTGGACTTCCTCAACCTCTTCCAGTTCATACTCATGGCGGGCAGCAGC
CGCTGATGCGCGTGCTGCCACTCTCTTGCTGCGCTGCGCGTCAACGCGGT
TCTGCAAGCCTCACAAGGACAAGGCGCGGCGCGCACCCCCACAGGGGCCG
CTGCTTCCACTGACACCAATTTTGCTAGAAAAAGGGCGAGCCTTTCTTTT
TTTTCTATACAAAAGTGTGGCATGCTACATGCCGTAATGCGTGGCCAATT
TCGCTGCCGCCAGGTGCGACGGTGTTGCCGAATGCGCGCCTTGCCTCGGT
GGCGCACCGAAGGCTCTGCAGAGGCATCTGGTGTTTGCGCTGTGAGCGCG
AGCACGCCACGCGCAAGGATTGTGGGGCCACGTGGCGGTGTGCTGGGTTG
AGATTGAGTGCAAGTACCGTGGCACAACGGGGGGCTCGGGGGGGGCACAT
GCTTGGCTGGGTGATCAACGATCACTGCACATCAGGTCACGATAATGTAC
TGGTGCGCCG

protein sequence of jgi.p|Trimin1|347495

>Trimin1|347495|estExt_Genemark1.C_Ctg_120137 ID=Trimin1|347495|estExt_Genemark1.C_Ctg_120137|Name=jgi.p|Trimin1|347495|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=296bp
MPVLRPEDLGPDGNPIRADNGKPAVANPGAPDAYAYGYPQQLEAPYKEYA
NQAYAGTYTQGDIESGTVPPQNTAAAAGLDPAIARKIRHGFLRKVYCILM
LQLALTCGVCAVFMFVDPVRNYMLDNWWPFWVAFIVGLVLLCGMFAKRKS
HPANLVLLTAFTLTQSVIVGTTCAAFASYDAGQSVVTALFITMAVFGALT
LFTLQTKIDFSFMGAGLGCALLMLLLWGLIAAIFGLKGGFVYALIGSIIF
SLYILYHTSVIMHKLPPDEYILAVIMLYLDFLNLFQFILMAGSSR*

mRNA from alignment at Contig_12:1209002..1216047+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3811 ID=mRNA_3811|Name=jgi.p|Trimin1|347495|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7046bp|location=Sequence derived from alignment at Contig_12:1209002..1216047+ (Tribonema minus UTEX_B_3156 )
CGCCACGCAGGTGTGCGTCGGGTGCGCGTGCAGCAGCAGGACAGCAATCC
TGGTGCACGTGATTCAGGATGCCGGTGTTGAGGCCAGAAGACCTCGGTCC
CGACGGGAACCCCATCAGAGCGGACAATGGCAAACCAGCTGTTGCTAATC
CAGGAGCACCAGACGCTTATGCTTATGGCTATCCACAGCAGCTGGAAGCT
CCGTACAAGGTGCGCATTACTGTCAATGCTCTTCTGCAGCGATTACTTCA
TGTTCCTTTTTCTTTTTCCGAAAAAAGCCAAGTCGCGAATTTGAGCTTGC
TAATCGTGCTGTGCGGTGCCTGGCAACATTGTTAGGACGTTCCTGCATTG
CGCAACACGTCAAAACTGCTCGGGGCAGCTGAGTGTTGGGCTGTTATAGC
TCCTGCTCTCATTTTCCATGTAAGAACTCCAGTAGTTGCAGCAATGCATT
TCTGCGTGGCCTGCAACCATCATGCAACATTGTAGCATTAGATGCGTGAG
CGTAAAGACACCTGTCGCATGCGAAGCCCAGCTCGCATCCCGCACCAGCA
GCACTGAAGGGTGCTTGCTGAATGTCGGCGCTAGCATCCTTCACCGCTGT
TCAGACAGTTCCTACATATCATGGCCCGCGACCTTGCGGCGACATAGCAG
CATCGTACTGCTGCATGTGACAAGCTATATCATGTGGACTCTATGGTCGT
AATTTGCGCCACGTGGCAGCGCTGGTCGACGTCTGCACGTCGCTCATAGC
TCAGACCTGATCGCCTGTGTAGACTGCATGCCATTGGCACAGGGTCAAAG
CTTGGTGTCTGTGTCTGAGCACAGGCGACGTGGCGCATCTGTGAATGTGC
GCTGAGGTGCACCGCCAACGCATTTCGGACTGTCCTCTTGCGCCGCTCAA
ATCACAGCAGATGCTCGCCCGATGCTAGCACAACGAACCCTGCCGATGGG
GGCCCTCACTCGCCTTTCTGAGACTTGCGCAACTAGACTACAGTAGTACA
AGAAGGCACAGCAACAAGTTACACAGTACGCGCGCCCAGCACCAAACCTC
CGCCGCTGGTACAAGAACGCGCAGCAACACACCACATCGCTTACACTCGG
CGCCACACCTGCGCCTGCGCACGCTCCGGGTGATCCCCCCCCTCCCCCCC
CCCGTCTCTTTCCCGCGCATGCTTGCTCTGCTCAGGCACAAACCGCTACT
GTGGCGCCAGCGTATGCGACCCAGGAGTACGCCAACCAGGCGTATGCGGG
CACCTACACGCAGGGCGACATAGAGTCGGGCACGGTGCCGCCGCAGAACA
CGGCAGCCGCGGCCGGCCTCGACCCTGCCATCGCGCGCAAAATACGCCAC
GGTGAGTGAGTACTGCATGGGGTCAGGATTAGGGTTAGGGTTAGGTTGAG
TGAGCGGACCCGCTCAGTGCGCAGAACATACGGCATGGTGAGTGAGCACT
GCATGCGCGCGCGCGCTGGCGTGGTGCTAGGAAGAGGCCGATGGCGCGCC
TGGGACAACAGCAATCGCTACTGCAACAAGCGGACGAGGGTCGTGTAGCT
GAAGTCTACTTCAACGGAAGAATGGTTTGCATGCGTACAGCGTACGACGG
CACCACACGCACAGTGCGCCATCTTCATTCTCCTGTGTGCTTGTTTACGG
TGTGGTTCAAAACTACTCTTTATTGACCCCCAGATGTTTTTGTCGCACTC
GCTGTTGAGCACTTGTTGCGGAGCACCACCGGGGGCGCTGGCGAATCTGA
CGACAAGTATTGACACTGAGATTGGCAATGTCGTGGAGTGTTTGAAGAAA
TCACGCTTCTCCAGCCTTTCCAGCGCATCGGACTCATTGGATGTTGTCGC
ATGTGCTCGCACTTGTCTATGCTGCCACACATCATCAGCATGTCGTCAAT
TCAACCCTCCGCGCTGCGCGTGCTCCCCGCGGCCCCCTCTCTCCCGCGCG
GCAGGGTTCCTGCGCAAGGTGTACTGCATACTGATGCTGCAGCTGGCGCT
GACGTGCGGCGTGTGCGCCGTCTTCATGTTTGTCGACCCCGTGCGCAACT
ACATGCTCGACAACTGGTGGCCGTTCTGGGTCGCCTTCATTGTGTGAGTG
GCCCTGGCCGTGCGCAGTGGTGGTCGGCTTCCAGGGCGCTGCTGCGCGCG
ACACGGCTTTGTAACTGTCACTTTGTAACTGTTGTTTTGGAAACATCGGC
TGTGGATGAGTAGGACATGCAGGCAGGCGGAGGGGGCTTGCGCACTCTTA
TTGAGTCATGCTGCAGTTGACCACGGAAGCGAGTGCGCAGGTGCAAGTCA
CAAGCGGTGGTCGTTTTGACCCCCTGTGTCCGATGTGCTTGTTTCAGTAC
GCTGCTGTCCTTGGCCGAATCAGTGGCTCACAATTCAGTGCGGAATAAAG
AAGGTCTCTCTGGAATTGGGTTACTGATGGGCGGTACAGCGGCTCACAGT
GACGGCGTCTTGGTGATTGCGTATTGGTCTGGATCAATCACACGTGTAGC
ACTCAATGCATGGCACTATCACATGGCCGAAGGCAGGGTGGTGGTGAGGT
TGACACTCAGTCGCTGCCACCAAGTAGCGTAGTGGTGTGTGCCCCCATCA
AGATGTTTTCCATCAGTAAAGTGTACGGTGGCAAGAAGCACTTGTAGTGA
TCCTGCTCAAACCATGCCGCACTTATTCTGGCCAAGAAAGCCACCCTCTC
GGTTTCACAAGGCACCGTGATTGCATGCGCCACACCCCACACAACGCGTA
CATCTATGCCACGCGCGCATGACAACATGGCGCAGCAGCAGCGCGCATGC
AGCAGCAAGCTACCATCCGCACCGCCGCACTGTGCGCGTATCGCCACGCA
GCGCCACGAAACCGCCTGTTCAAGTTCACGCAACTGCCGCTTTCTCACGT
ATCTCGTGCGCCCGCACCCCGCCCGCCGTGCCGCCGCAGCAGCCTGGTCC
TCCTGTGCGGGATGTTTGCCAACCGCCACGAAACTGACTGTCGAAGTTTG
CGCAACTGCCATTTTCTCACGTACTTTTGCGCGTGTCTTTCGCATGCGCC
CTGCTTCGCCGCGCCGCAGGGGCCTGGTCCTCCTGTGCGGCATGTTCGCC
AAGCGCAAGTCGCACCCCGCGAACCTCGTGCTGCTCACGGCCTTCACGCT
CACGCAGTCGGTGATCGTTGGCACCACGTGCGCCGCGTTCGCCAGCTACG
ACGCGGGGCAGTCGGTCGTCACCGCGCTCTTCATCGTGAGTCAACGCCGC
CCGTGCGTGCATGTGTGAAGAAGCGACGCGCAGATGCCGAGCGTAGTGTA
TGAGCGGCGCGCAGGTGCCGAAAGCGGTACATGTATGCACCAGCAGCACG
CACCAACAGCTGCAGACTTGGCATGCGGCGCTTGAAGTGTTTGGATCGGG
GTCTCTGTGCGTACTCATGTCACAAAAGTATATGGGTCGTCAAGTCGCAA
GTCGTCACCGCGCTCTTCACCGTGAGTCGCCGCCGCCCCGCCGCGCGTGC
CCGCATGTGTGCAGCGCCTGTGCCCGCATGTGTGCAGCGCCTGTGCCCGC
TTGTGTGTGAAGGAGCGATGCGCAGATGTGGCACATAGAACACGCAGCAG
CGCGCACTCTCACCTGCAGACGTGGCATGCGGCGCTCGAAGCGTGTAAAT
TGGGTTCTCTCCGTGTACTCATGTCACGAGAGTACGTTGTCGTCAAGTCG
TGAGTCGAGGTCTTTGTCCGTCCGCCGCGTGCGCGCACCTTTGCAACAGC
AGCAGTGCTCGAAAGGACTGCAGTGGTGTGCAAAGCGCGGTTTACAGATG
CAGTGGGCTGCTGGCCAAATGCTTTGCGCAGAAAGCCTGCAAGCCAAAAG
GACAACCGAGTCACTTGCGAAATTCCCCCGTCCTCCCTCCCCCTTTCTCC
GCGCAGACCATGGCTGTCTTTGGTGCCCTGACGCTCTTTACTCTTCAAAC
AAAGATTGACTTCTCATTCATGGGCGCTGGATTGGGATGTGCGCTCCTGA
TGCTGCTCCTCTGGGGGTGAGTAAATGAGTAGAGTCGGAGTTTCTGTTAG
GAGCAGGATCAACGTGCAGGCATTGCATGTACGCATTGCCCGTCTTTTCC
GCTTGCACCTGTCATGGCGTCGTGTGTGCCCCTGTTTGCTCTCCACTGAT
CGCATGCTGGAAGAACTGCTGTGAGGCAAGCCGTGCCGCAAGGTCGCTTG
TTCTCGCATGAACGAGCGTGAAAAGTCGAAGCTCTGGCAGATGGTCACGA
AACACCATGCTTGCGTTCAGCGCATTTTGCATGGCCTTCTCCGTGTTTAA
ATGCCCCTGGTCTGCGCTTGAGGATTTGTTGCAGCACATCAGTCGCTCAC
TATCCTCGCCATGTGGTTGTTGTGCCTACTTGAGCATTGCGCAGCTGTAC
GTCTTGCAACGCAGCATCACCCGCACCACCACCTGAACTTGCAGCTCAAG
GCTAAAAGACACTGTACCCCCTGCGCGCGCCGCCGTGCCTGGCGCTGCAG
GCTCATCGCAGCAATCTTTGGGCTTAAAGGGGGTTTTGTTTACGGTGAGT
GACTGGCAGTGACGTGTTACTTCTTGTGCTTTGAAATAGATGTACTTTTT
ATTCATTCTCGCTCAGGGCGCGAAAAAGCCCAGATGATTGGCATCTAGCT
GTAAGGAATCTACATGTCGTATGAGTGTTGTACTTTTTATTAATTCTCGC
TCAGGGCGCAAAAAAGCCCAGATGATTGGCATCTAGCTGTAAAGAATCTA
CATGTCGTATGACAGTCTGAAAGTGTCGCAACGGCAACCACTCAAACGCC
GCCGCCGCCAAATGGCATCTCGGGGTCCTCCCCTACGTCCTCCTCCATGT
GCCCCCCCCCCCCCTGGATTCTGCCATGTGTGTCATGACACGGCCAGAGT
ACGCCATGTGGAGCGCTGCCGACAGTGCTTTTACATGGGGATCTGATGGC
CGCGACCTCACATGTATGTATCGATCTATACATGAATTACATACGCCTAT
GTAATTGCGCCACGCTCGCATCCCTGCTCTCAACGTGACATGCGAAGCGA
ACACTCGTTGGCAAGTTTGCCTGCAAGTAAGGCACGCGTTCAACCTTCTT
GAAGAGCACGACTTGCACGACTGGTAGCTCTCTGCATACGAAAATGGCGC
AAGTACGTACGCATTGCGTGTGGCAAATCGCTGGTGATATGTTTGCATCC
CACATCTTTCGTAGGTATACATTTAGAAGTATTATAATCAAATGTACACC
ACATACACAAAGTACATGAACGTCCGCTGCCCACTCCACTGGTATCTCAT
AATGCTCGCTCCTGAGAGCGCTTTGCTTGCCACTGATTAGCCGAGGTAGA
ATCATGCATACATTAGGCAAAGTACCTCAGGGCTAGTTTTGTCAACGCAA
GCAACGCTGATGTGTCTGCAGTGGGACAGCCCCAGCATTCCGTGTGTTGC
GTCTTGTGTTTCTTCCGTTGCAACAATGCTGATCAAAGCATCATTGCTTG
CTTTCAGGATGCCCCTGATGCACAAAGCCGGTGCGGCACTAATGCTGTAG
TGTCAATGGCCTTTTCGCGCCTGAAGTTGGCAAAGCGCATGTTGCAGCTG
TGCAGGCTCCGCAGCCCCCATACCTCGAAATACGTTTAAAAGCACCTAAC
ATCTGTGCAATACGCGGTGTTGGTGACTTCTTTGCGCATCTGCAGCGCTG
ATTGGCAGCATCATCTTTTCACTGTATATCCTGTACCACACGTCGGTCAT
CATGCACAAGCTGCCGCCGGATGAGTACATCCTGGCGGTTATCATGCTCT
ACCTGGACTTCCTCAACCTCTTCCAGTTCATGTGAGTGCGCCGTTTCGCG
AATCTGGTCATGCGCCCTACGCACGCGCTCAAAAGCAGTGGGCATAGTGA
GCTGTGCGGTCAGATGCGGGCGTTTCCTCCTCTCTGAAGGCTGCGTTGCG
AGCATTCTACTGTCCAAGGATGCAGCGGCGGAGTAGGTGCCGTGCTCCGT
CCACAACTTTCCAATTTCATTCAGTTCATGTAGTAGTGCCCAGCCGATCT
CTCTCAGTGTATGGGGTATGCTTCAGGGGCAGCGCCGCACAGTGGGACCA
GCTACTCGGATGCAGATATGCATGCAGGGAGTTCCGCACATGGTCGTGGG
CAAGCGCGCAGCAAAATGCTCAAGAGGACTTGTTCAGCGCGCGCCGCGCC
GGCAAGTAACGTACAAGGGGTCCTGTACGAAAACTCTGCCACAAACTGAG
CATTGCAGTGACCATCTTTAAGGACTCAGCAGCTAGACATGCTGTGTTCT
GCGCCACATCTACCGTGCCCCTGTGCTCCATGAGTGTCCATGCCTGAAGT
CAGCCAGGGACTAGGTTTCGGCTACATGCCTACAGGACTAAAGCATCCTG
ACAGCGCGCGTGCCATGGCCAGACATTCACCTGTTGAGCCTTGCACTTTG
CAGTATGGTTTATGCACTTCGACGCATTCCTTCAGGTGCTACAATTGCGC
CTCTGTGTGTCTGAAGCCATGACCTCTCACGCGACCGCCGCCGCTCGACG
CCGTTTTGCCGCCGCAGACTCATGGCGGGCAGCAGCCGCTGATGCGCGTG
CTGCCACTCTCTTGCTGCGCTGCGCGTCAACGCGGTTCTGCAAGCCTCAC
AAGGACAAGGCGCGGCGCGCACCCCCACAGGGGCCGCTGCTTCCACTGAC
ACCAATTTTGCTAGAAAAAGGGCGAGCCTTTCTTTTTTTTCTATACAAAA
GTGTGGCATGCTACATGCCGTAATGCGTGGCCAATTTCGCTGCCGCCAGG
TGCGACGGTGTTGCCGAATGCGCGCCTTGCCTCGGTGGCGCACCGAAGGC
TCTGCAGAGGCATCTGGTGTTTGCGCTGTGAGCGCGAGCACGCCACGCGC
AAGGATTGTGGGGCCACGTGGCGGTGTGCTGGGTTGAGATTGAGTGCAAG
TACCGTGGCACAACGGGGGGCTCGGGGGGGGCACATGCTTGGCTGGGTGA
TCAACGATCACTGCACATCAGGTCACGATAATGTACTGGTGCGCCG

Coding sequence (CDS) from alignment at Contig_12:1209002..1216047+

>mRNA_3811 ID=mRNA_3811|Name=jgi.p|Trimin1|347495|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=888bp|location=Sequence derived from alignment at Contig_12:1209002..1216047+ (Tribonema minus UTEX_B_3156 )
ATGCCGGTGTTGAGGCCAGAAGACCTCGGTCCCGACGGGAACCCCATCAG
AGCGGACAATGGCAAACCAGCTGTTGCTAATCCAGGAGCACCAGACGCTT
ATGCTTATGGCTATCCACAGCAGCTGGAAGCTCCGTACAAGGAGTACGCC
AACCAGGCGTATGCGGGCACCTACACGCAGGGCGACATAGAGTCGGGCAC
GGTGCCGCCGCAGAACACGGCAGCCGCGGCCGGCCTCGACCCTGCCATCG
CGCGCAAAATACGCCACGGGTTCCTGCGCAAGGTGTACTGCATACTGATG
CTGCAGCTGGCGCTGACGTGCGGCGTGTGCGCCGTCTTCATGTTTGTCGA
CCCCGTGCGCAACTACATGCTCGACAACTGGTGGCCGTTCTGGGTCGCCT
TCATTGTGGGCCTGGTCCTCCTGTGCGGCATGTTCGCCAAGCGCAAGTCG
CACCCCGCGAACCTCGTGCTGCTCACGGCCTTCACGCTCACGCAGTCGGT
GATCGTTGGCACCACGTGCGCCGCGTTCGCCAGCTACGACGCGGGGCAGT
CGGTCGTCACCGCGCTCTTCATCACCATGGCTGTCTTTGGTGCCCTGACG
CTCTTTACTCTTCAAACAAAGATTGACTTCTCATTCATGGGCGCTGGATT
GGGATGTGCGCTCCTGATGCTGCTCCTCTGGGGGCTCATCGCAGCAATCT
TTGGGCTTAAAGGGGGTTTTGTTTACGCGCTGATTGGCAGCATCATCTTT
TCACTGTATATCCTGTACCACACGTCGGTCATCATGCACAAGCTGCCGCC
GGATGAGTACATCCTGGCGGTTATCATGCTCTACCTGGACTTCCTCAACC
TCTTCCAGTTCATACTCATGGCGGGCAGCAGCCGCTGA