mRNA_3806 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|142040
Unique NamemRNA_3806
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: A0A836CLL1_9STRA (DOT1 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL1_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 8.460e-151
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
Query:    1 TAGHMSLLEKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADASTKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRITLAEHQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSAQRCALRAMQTAMLSTSWAPVKGHPFY 660
            TAGHMSLLEKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADASTKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRITLAEHQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSAQRCALRAMQTAMLSTSWAPVKGHPFY
Sbjct:    1 TAGHMSLLEKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADASTKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRITLAEHQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSAQRCALRAMQTAMLSTSWAPVKGHPFY 220          
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: A0A7S1CRN6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CRN6_9STRA)

HSP 1 Score: 131 bits (329), Expect = 7.010e-32
Identity = 93/222 (41.89%), Postives = 122/222 (54.95%), Query Frame = 1
Query:    1 TAGHMSLLEKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADASTKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRITLAEHQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARS--AQRCALRAMQTAMLSTSWAPVKGHPFY 660
            T GH  +   D  AA   G +L YGE+LP G  + LD   L AADA++  +LG GTGK ALQAFL Y NL  VVGVEL+PSR+A+ E A  R  A  PGRF +A    G  I +A        SG  RL V R GNL +    ++ AA  V+L+  LP ++ PQ+   L+SRL P  RLL+Y +   +W   +    R A+    +    TSW+   GH F+
Sbjct:   81 TDGHECVTTADVEAAQCNGGSLLYGEVLPSGVCKLLDDEHLGAADATSLYDLGMGTGKMALQAFLMYENLKTVVGVELSPSRYAIGETALRRFVACSPGRFVIASWSRGSEIVMA--------SGDRRL-VFRRGNLFE--ETDVVAADIVVLETDLPATVHPQVCH-LISRLRPSTRLLTYLNMRSLWSLPTFPLHRMAINRSSSDRFLTSWSFTHGHRFF 290          
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: A0A7S2SB25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB25_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.100e-31
Identity = 99/246 (40.24%), Postives = 132/246 (53.66%), Query Frame = 1
Query:    1 TAGHMSLLEKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADASTKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHP-GRFRVAEHVPGQRITLAE----HQL-----------------GRGASGQP--RLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSAQRCALRAMQTAM--LSTSWAPVKGHPFY 660
            T GHM L E+D   A K   ++ YGELLP G  RALDAA LH    S+ ++LG GTGK  +QAFLQY+NL  V+GVEL+ SR  +AEAA L+L   HP G+F +  H PG+ I L E     Q+                 G    G P  R L L   NL ++  +EL +A  V+L+  +P  L   L ACLL ++  GAR+LSY     +W   +     L   +++M    TSW+  +GH FY
Sbjct:  264 TVGHMCLSEEDRQLAKKTKCSMLYGELLPKGVNRALDAAHLHVKAGSSLVDLGMGTGKVVVQAFLQYSNLNYVLGVELSSSRFRVAEAALLKLKNLHPPGKFEIVCHRPGREIVLREVPKKEQIEGVASSTAASCVDAPWPGARGKGIPPGRYLHLERKNLFEV--SELSSADFVLLETDIPSELLIDL-ACLLYQMKKGARVLSYLDFRKLWDVTAMPFSQLEINKSSMDRFPTSWSVQRGHHFY 506          
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: A0A7S4Q1V9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q1V9_9DINO)

HSP 1 Score: 114 bits (286), Expect = 2.220e-26
Identity = 81/173 (46.82%), Postives = 103/173 (59.54%), Query Frame = 1
Query:   55 GSNLQYGELLPGGTARAL--DAAILHAADASTKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRITLAEHQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMW 567
            G  L YGELLP G ++AL  +   +  A     LELG GTGK ALQAFL+   LA V+GVELAPSR+A AEAA  RLAAA P  F      PG+R  L E   GRG  G+  L +LR G+  D+P  EL +A AV++QV LP++  P+L   LL     G+R+L ++     W
Sbjct:  113 GHGLTYGELLPAGVSKALGPERLAVQRAGGGLLLELGMGTGKVALQAFLECPCLARVLGVELAPSRYAAAEAALRRLAAARPEHFAAEVRQPGRRFVLRE-PAGRGGLGR-ELEILR-GSFFDLPEEELASADAVLVQVMLPQAEVPRLQR-LLCGAKEGSRMLLFDDVAFSW 281          
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: A0A6H5KB73_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB73_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 8.200e-23
Identity = 82/247 (33.20%), Postives = 120/247 (48.58%), Query Frame = 1
Query:    1 TAGHMSLLEKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADASTKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQ--------------RITLAE-----------HQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSA--QRCALRAMQTAMLSTSWAPVKGHPFY 660
            T GH  + ++D  AA +   +L YGELLP G  +A+    L+AA AST  +LG GTGK A+Q FLQ+ NL  V G+EL+ +R  L EAA   L    PG + + +H+PGQ              +++LAE             L RG  G  R L    GNL D+    L  A  V+L+  +   + PQL    L+ +  G+  L+Y     MW +     ++  +    +    TSW+  +GH F+
Sbjct:  282 TVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLDQDHKQQQLSLAEGDGWREGGAGWEHLCRGPPG--RTLEFACGNLFDV--THLAQADLVLLETDVSSDIHPQLSR-FLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFF 523          
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: A0A813KQY5_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KQY5_POLGL)

HSP 1 Score: 100 bits (249), Expect = 2.090e-21
Identity = 81/190 (42.63%), Postives = 111/190 (58.42%), Query Frame = 1
Query:    4 AGHMSLLEKDHAAALKAG--SNLQYGELLPGGTARALDAAILHAADA---STKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRITLAEHQ---LGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCP-GARLLSY 546
            AGH  +  +D A+ ++ G  S+L YGELLP G ++ ++A  ++  DA    + LELG GTGK ALQ FL     + V GVELAPSR ALA+AA  RLA A P RFR   H P     +AEH+   L      +PR+  +  G+LLD P   L  A AV+++VCLP+ +  Q  AC + + C  G R++ Y
Sbjct:    6 AGHEVVGAEDVASVVETGQGSSLLYGELLPDGVSQLMEAFFVNRPDACRAGSLLELGMGTGKVALQLFLSLPGCS-VFGVELAPSRWALADAALRRLAEAVPERFR---HEP-----VAEHRARLLDLSNGEEPRVFDIVCGSLLDTPIDILAGASAVVMEVCLPKEV--QRQACRVLQHCQVGCRVVCY 184          
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: A0A7S4Q737_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q737_9DINO)

HSP 1 Score: 99.4 bits (246), Expect = 6.620e-21
Identity = 79/218 (36.24%), Postives = 111/218 (50.92%), Query Frame = 1
Query:   25 EKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADA---STKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRITLAEHQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSA---QRCALRAMQTAMLSTSWAPVKGHPFY 660
            E +   A + GS+L YGELLP G ++A+    L  A A      LELG G+GK ALQ FLQ  ++  V+G+EL PSR A+AEAA LRLA A P  FR  +H PG+ + + E   GR        L  +  +   +       +  +   V +P  L+PQL   LL R   G RL +Y+S   +W         +C     +    STSW+P +G+ F+
Sbjct:   77 EAEKQEAKERGSSLLYGELLPAGVSKAMLPDRLGGALACGGKLLLELGMGSGKVALQIFLQCRSVGHVLGIELVPSRFAIAEAALLRLAEARPRAFRRLQHEPGRLLAVEELPGGRK-------LEFQCADFFSLGLDLTERSDVIFFAVNVPCKLFPQLCERLL-RAKEGCRLFTYHSLETIWWINEPCPFLQCEANVPEADTFSTSWSP-QGYRFF 285          
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: D7FY73_ECTSI (Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY73_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 7.030e-20
Identity = 79/251 (31.47%), Postives = 115/251 (45.82%), Query Frame = 1
Query:    1 TAGHMSLLEKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADASTKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRI---TLAEHQ--------------------LGRGASGQPRLLVLRTGNLLDMP------TAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSA--QRCALRAMQTAMLSTSWAPVKGHPFY 660
            T GH  + ++D  AA +   +L YGELLP G  +A+    L+AA AST  +LG GTGK A+Q FLQ+ NL  V G+EL+ +R  L E A   L    PG + + EH+PGQ I   TLA+ Q                       G +G   L     G  L+           L  A  V+L+  +   + PQL    L+ +  G+  L+Y     MW +     ++  +    +    TSW+  +GH F+
Sbjct:  285 TVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEEALFALMELQPGAYTIKEHIPGQFISIETLAQDQDHXXXXXXXXXXPSLAEGGGWREGGAGWEHLCRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSR-FLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFF 534          
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: A0A7S2MT62_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2MT62_9DINO)

HSP 1 Score: 95.5 bits (236), Expect = 7.210e-20
Identity = 77/218 (35.32%), Postives = 109/218 (50.00%), Query Frame = 1
Query:   25 EKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADAS---TKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRITLAEHQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSA---QRCALRAMQTAMLSTSWAPVKGHPFY 660
            E +   A + GS+L YGELLP G ++A+    L  A A      LELG G+GK A+Q FLQ   ++ V+G+EL  SR  + EAA LRL  A P R R  +H PG+++ L E   GR        +  R  +   +       +  +   V +P  L+PQL    LSR   G RL +Y++   +W        Q C   A +    STSW+P +G+ FY
Sbjct:   13 EAEKQEARERGSSLLYGELLPDGVSKAMLPERLGGALAGGGGLLLELGMGSGKVAMQIFLQCPRVSHVLGIELVRSRFQMGEAALLRLEEARP-RLRRTQHEPGEQLALEEPDSGRK-------IEFRCADFFALGLDLTERSDVIFFAVNVPCKLFPQLCE-RLSRAKEGCRLFTYHALDTIWWLNEPCPFQHCEANASEADTFSTSWSP-QGYRFY 220          
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Match: A0A7S3ZW16_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW16_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.700e-19
Identity = 80/225 (35.56%), Postives = 110/225 (48.89%), Query Frame = 1
Query:    1 TAGHMSLLEKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADASTKLELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGRFRVAEHVPGQRITLAEHQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQAVMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSAQRCALRAMQTAM-----LSTSWAPVKGHPFY 660
            T GH+ + + D   A +   +L YGELLP G  +ALDA  L AA AS+  +LG GTGK ALQAFLQ+ NL  V GVEL+ +R  +AE A L LAA       +    PG  I +         +   R L++  GNL  M T ++  A  VML+  +P   + +    LL     G RLL+Y     +W     Q    R ++          TSW+  +GH  +
Sbjct:  159 TLGHVCVTDDDRRRATEDRGSLLYGELLPRGVHKALDARHLDAARASSVYDLGCGTGKVALQAFLQFPNLKRVYGVELSLARFHVAERALLALAARDDCDAHITRREPGSSIEV---------TSVDRTLIIEHGNL--MRTRDVGDASIVMLETEVPADTFGEFSR-LLDACKEGCRLLTYLDLRRVWRL-PGQPFPFRQLEANRSFADRYPTSWSVQRGHHLF 370          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142040 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLL1_9STRA8.460e-151100.00DOT1 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S1CRN6_9STRA7.010e-3241.89Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2SB25_9STRA2.100e-3140.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4Q1V9_9DINO2.220e-2646.82Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A6H5KB73_9PHAE8.200e-2333.20DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A813KQY5_POLGL2.090e-2142.63Hypothetical protein (Fragment) n=2 Tax=Polarella ... [more]
A0A7S4Q737_9DINO6.620e-2136.24Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
D7FY73_ECTSI7.030e-2031.47Topoisomerase 6 subunit B n=1 Tax=Ectocarpus silic... [more]
A0A7S2MT62_9DINO7.210e-2035.32Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A7S3ZW16_9STRA1.700e-1935.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:1183645..1184655 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|142040|gw1.12.223.1
Max annot lvl2759|Eukaryota
EggNOG OGs2C39T@1|root,2STY5@2759|Eukaryota
Evalue1.15e-20
Seed ortholog2880.D7FY73
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDOT1 histone methyltransferase
Ec32 orthologEc-24_003550.1
TranscriptId142362
TrackFilteredModels1
ProteinId142040
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142040gene_3806Tribonema minus UTEX_B_3156 geneContig_12 1183645..1184655 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3806_1exon_3806_1Tribonema minus UTEX_B_3156 exonContig_12 1183645..1184047 +
exon_3806_2exon_3806_2Tribonema minus UTEX_B_3156 exonContig_12 1184399..1184655 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3806CDS_3806Tribonema minus UTEX_B_3156 CDSContig_12 1183645..1184047 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142040Trimin1|142040|gw1.12.223.1Tribonema minus UTEX_B_3156 polypeptideContig_12 1183645..1184655 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3806 ID=mRNA_3806|Name=jgi.p|Trimin1|142040|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=660bp|location=Sequence derived from alignment at Contig_12:1183645..1184655+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACAGCAGGGCACATGTCCCTGCTCGAAAAAGACCATGCGGCAGCCCTGAA
AGCCGGCAGCAACCTGCAGTATGGAGAGCTGCTCCCAGGTGGAACAGCAC
GCGCGCTCGATGCCGCCATTCTGCATGCCGCTGATGCGAGCACTAAGCTA
GAACTCGGCAGCGGCACTGGGAAATCCGCCCTGCAGGCCTTCTTGCAGTA
TACCAATCTGGCCGCTGTGGTTGGAGTCGAGCTGGCGCCGTCACGGCACG
CGCTGGCGGAGGCGGCTGCTCTGCGCTTGGCAGCTGCGCACCCCGGACGG
TTCCGTGTTGCGGAGCATGTGCCGGGACAGCGCATTACACTGGCAGAGCA
CCAGCTGGGGAGAGGAGCTAGCGGACAGCCGCGGTTACTTGTGCTACGCA
CAGGAAACCTGCTGGACATGCCAACAGCAGAGCTACGCGCCGCTCAGGCC
GTCATGCTGCAGGTGTGCCTTCCCGAGTCCCTCTGGCCGCAGCTCCACGC
GTGCCTGCTGTCGCGCCTGTGCCCTGGCGCGCGCCTGCTGTCCTACAATT
CGCCCGTTGACATGTGGCACGCACGCAGCGCTCAGCGTTGTGCCCTGCGC
GCCATGCAGACGGCCATGCTGAGCACCAGCTGGGCGCCGGTCAAGGGGCA
TCCGTTCTAC
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protein sequence of jgi.p|Trimin1|142040

>Trimin1|142040|gw1.12.223.1 ID=Trimin1|142040|gw1.12.223.1|Name=jgi.p|Trimin1|142040|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=220bp
TAGHMSLLEKDHAAALKAGSNLQYGELLPGGTARALDAAILHAADASTKL
ELGSGTGKSALQAFLQYTNLAAVVGVELAPSRHALAEAAALRLAAAHPGR
FRVAEHVPGQRITLAEHQLGRGASGQPRLLVLRTGNLLDMPTAELRAAQA
VMLQVCLPESLWPQLHACLLSRLCPGARLLSYNSPVDMWHARSAQRCALR
AMQTAMLSTSWAPVKGHPFY
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mRNA from alignment at Contig_12:1183645..1184655+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3806 ID=mRNA_3806|Name=jgi.p|Trimin1|142040|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1011bp|location=Sequence derived from alignment at Contig_12:1183645..1184655+ (Tribonema minus UTEX_B_3156 )
ACAGCAGGGCACATGTCCCTGCTCGAAAAAGACCATGCGGCAGCCCTGAA AGCCGGCAGCAACCTGCAGTATGGAGAGCTGCTCCCAGGTGGAACAGCAC GCGCGCTCGATGCCGCCATTCTGCATGCCGCTGATGCGAGCACTAAGCTA GAACTCGGCAGCGGCACTGGGAAATCCGCCCTGCAGGCCTTCTTGCAGTA TACCAATCTGGCCGCTGTGGTTGGAGTCGAGCTGGCGCCGTCACGGCACG CGCTGGCGGAGGCGGCTGCTCTGCGCTTGGCAGCTGCGCACCCCGGACGG TTCCGTGTTGCGGAGCATGTGCCGGGACAGCGCATTACACTGGCAGAGCA CCAGCTGGGGAGAGGAGCTAGCGGACAGCCGCGGTTACTTGTGCTACGCA CAGGTACGTGCACTCAGCTCTCTTGTCTCAAGAGAGCACACCAAGCGTGT CATGGCATGGGATATGTACTACAGTGCAGTGCACTAGTATTGATGGTACT ACAGGCACTGCAGAATGACTCAGCATTGGTACTGGTGACACGTGAATGGG AGCTGACGGTCGAACTACGCCGCAGCAGTCGAATCATCAACCTGACAGTG AGTGCAATCACATGGTGCTGCACCAGCCTCCGCAGCCCACAGGCTGCTTA TAAACATGCCGGACGCCACTCATGAGTCAGCCCTCAACAGCTCTGCGCTG CGGCTGACACAATCACGCGGCATCCGCACCCATCCTGTCGCATCACTCCG TCAGGAAACCTGCTGGACATGCCAACAGCAGAGCTACGCGCCGCTCAGGC CGTCATGCTGCAGGTGTGCCTTCCCGAGTCCCTCTGGCCGCAGCTCCACG CGTGCCTGCTGTCGCGCCTGTGCCCTGGCGCGCGCCTGCTGTCCTACAAT TCGCCCGTTGACATGTGGCACGCACGCAGCGCTCAGCGTTGTGCCCTGCG CGCCATGCAGACGGCCATGCTGAGCACCAGCTGGGCGCCGGTCAAGGGGC ATCCGTTCTAC
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Coding sequence (CDS) from alignment at Contig_12:1183645..1184655+

>mRNA_3806 ID=mRNA_3806|Name=jgi.p|Trimin1|142040|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=660bp|location=Sequence derived from alignment at Contig_12:1183645..1184655+ (Tribonema minus UTEX_B_3156 )
ACAGCAGGGCACATGTCCCTGCTCGAAAAAGACCATGCGGCAGCCCTGAA
AGCCGGCAGCAACCTGCAGTATGGAGAGCTGCTCCCAGGTGGAACAGCAC
GCGCGCTCGATGCCGCCATTCTGCATGCCGCTGATGCGAGCACTAAGCTA
GAACTCGGCAGCGGCACTGGGAAATCCGCCCTGCAGGCCTTCTTGCAGTA
TACCAATCTGGCCGCTGTGGTTGGAGTCGAGCTGGCGCCGTCACGGCACG
CGCTGGCGGAGGCGGCTGCTCTGCGCTTGGCAGCTGCGCACCCCGGACGG
TTCCGTGTTGCGGAGCATGTGCCGGGACAGCGCATTACACTGGCAGAGCA
CCAGCTGGGGAGAGGAGCTAGCGGACAGCCGCGGTTACTTGTGCTACGCA
CAGGAAACCTGCTGGACATGCCAACAGCAGAGCTACGCGCCGCTCAGGCC
GTCATGCTGCAGGTGTGCCTTCCCGAGTCCCTCTGGCCGCAGCTCCACGC
GTGCCTGCTGTCGCGCCTGTGCCCTGGCGCGCGCCTGCTGTCCTACAATT
CGCCCGTTGACATGTGGCACGCACGCAGCGCTCAGCGTTGTGCCCTGCGC
GCCATGCAGACGGCCATGCTGAGCACCAGCTGGGCGCCGGTCAAGGGGCA
TCCGTTCTAC
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