mRNA_3766 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: A0A835ZAX4_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX4_9STRA) HSP 1 Score: 749 bits (1935), Expect = 1.150e-271 Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 1
Query: 1 MTMHMYVCWGTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCKVTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKAGKGRGVAGRRAAREAEQAQKESRRDDPDFDPASAGNSSPPGRGV 1134
MTMHMYVCWGTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCKVTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKAGKGRGVAGRRAAREAEQAQKESRRDDPDFDPASAGNSSPPGRGV
Sbjct: 1 MTMHMYVCWGTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCKVTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKAGKGRGVAGRRAAREAEQAQKESRRDDPDFDPASAGNSSPPGRGV 378
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: D8LJJ8_ECTSI (Protein phosphatase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ8_ECTSI) HSP 1 Score: 341 bits (875), Expect = 2.990e-111 Identity = 178/342 (52.05%), Postives = 233/342 (68.13%), Query Frame = 1
Query: 28 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCKVTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKAGK-GRGVAGRRAAREAE 1050
GT LDKPVT+K+TE +T +GL FGASAMQGWRV+MEDSHTI+ + GL HSFVAV+DGHGG++CA YAG+ MMR + T ++ Y ++ +L KALY A+L D +++ + +A +RSG TA+++ +TP H+V+AHAGDSRA++ SG +VA AT DHKPY+ E+ARIE AGG VSM+RVDGDLAVSRALGDFQYK L P CKV+ P+T + R+P DE L++ CDG+WDVM+++DC + EIF +GE+ +GLACEE++D GSRDNMS V+VAF LK + G+GVAGRRA R AE
Sbjct: 2 GTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTE--KDTTVLEKALYAAFLACDRSVKASQ---------------------------DANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAVATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDALPPEECKVSPAPETRSFPRSPQDEFLVVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDM----GSRDNMSAVLVAFPGLKRSETGKGVAGRRAQRAAE 310
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: A0A7S2V4V3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V3_9STRA) HSP 1 Score: 307 bits (786), Expect = 5.460e-98 Identity = 178/360 (49.44%), Postives = 225/360 (62.50%), Query Frame = 1
Query: 28 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNC-KVTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALK---------AGKGRGVAGRRAAREAEQAQKESRRD 1077
GT LDKP+T K+T + +GL +GAS+MQGWRVEMED HTI + GL +HS VAVYDGHGG A +AGK ++ ++ Y +G R LL KAL ++ +DE K+++ A V + SGCTA+ AVITP+HIV A AGDSR I+ + G+V A +EDHKP A E+ RIE+AGG VSMRRVDGDLAV+RALGDFQYK R LP + KVTCVPD R+ GDE+L+L CDG+WDVM+N DC C +I+ +GE GL CEEL+DTCL +GSRDNMSVVMV F A+ A +G GV RR+ R EQ +E+ +D
Sbjct: 2 GTLLDKPITTKETS-NVEHNGLTYGASSMQGWRVEMEDQHTIEVHLTGLQDHSLVAVYDGHGGQFAAKFAGKTLVAEFLSSESVAEY--NRSGFRETSLLEKALKETFVAVDE---KLKTEADV-------------------------QCGDCSGCTAICAVITPSHIVCASAGDSRGIMVTSGQVRALSEDHKPDGAIERERIESAGGCVSMRRVDGDLAVARALGDFQYKDRPDLPVDRQKVTCVPDVRTTPRSSGDEVLVLACDGIWDVMSNQDCCDCVRQIYQEGETDSGLVCEELLDTCLTKGSRDNMSVVMVQFPAMLEPPPGTAAGAERGGGVMARRSKRAEEQRAREAAQD 330
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: A0A7S2PS74_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PS74_9STRA) HSP 1 Score: 292 bits (747), Expect = 4.800e-92 Identity = 158/346 (45.66%), Postives = 215/346 (62.14%), Query Frame = 1
Query: 28 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRN----VELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSR-DLLPRNCKVTCVPDTLVYRRTPG-DELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKAGKGRGVAGRRAAREA 1047
G+ LDKP+T+K+TE+ + + + +G S MQGWRVEMEDSHT++ ++P LP F YDGHGGS + YAG +M P+++ Y+A R+ ++L+ AL A+L IDE KM + + E + +RSGCT + V+T H++ ++AGDSRA G + DHKP DAEE +RI+ AGG+VSMRRVDGDLAVSRALGDFQYK R DL KVT PD +VY R P DE +++ CDG+WDV++ND+C +I +GE +GL CEE++D+CL SRDNM+ ++VAF + K GKG GVA RR AR+A
Sbjct: 2 GSMLDKPITEKETEKGEA-NSVVYGVSGMQGWRVEMEDSHTLVGSIPALPTMGFFGCYDGHGGSYTSAYAGDHLMNIFSERPEFKQYLALTQAARDSSEGIDLIKAALNNAFLQIDE---KMLAES-----------------------EEDRDPRDRSGCTCIVVVVTEKHLICSNAGDSRACYSRDGHAVPLSFDHKPNDAEEHSRIDRAGGYVSMRRVDGDLAVSRALGDFQYKDRADLPAEEQKVTAKPDLIVYPRDPEKDEFMVVACDGIWDVVSNDECVNMVQKILDEGETDMGLVCEEVLDSCLELNSRDNMTALIVAFPSAKFGKGGGVAARRDARKA 320
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: A0A6U5FKN3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FKN3_9STRA) HSP 1 Score: 284 bits (727), Expect = 3.980e-89 Identity = 158/344 (45.93%), Postives = 212/344 (61.63%), Query Frame = 1
Query: 28 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRN----VELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLP-RNCKVTCVPDTLVYRRTPG-DELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKAGKGRGVAGRRAAR 1041
GT LDKPVT+K+TE S +GL++GAS+MQGWRVEMED H + T +P L SF AV+DGHGGS + YA ++R L T Y YV R+ ++L AL A+L++D L+ + PE +RSGCT+++ +TP HI+ A+AGDSRA C GG + DHKP ++EE RI+ AGG+VSMRRVDGDLAVSRALGD QYK+R+ LP KVT +PD +V+ R DE +++ CDG+WDV++ND+ +IF +GE +G CEE++D CLA+ SRDNM+ +VAF + G+G GVA R AR
Sbjct: 2 GTLLDKPVTEKNTELGES-NGLKYGASSMQGWRVEMEDEHILATNLPKLDGTSFFAVFDGHGGSFTSYYAKGNLVRLLSETESYTKYVELSQEKRDEMDGLKLFKSALEQAFLNVDVELR---------------------------ETPE-HLKGDRSGCTSIAVAVTPKHIICANAGDSRACYCKGGAAVPLSYDHKPTNSEEHNRIDRAGGYVSMRRVDGDLAVSRALGDLQYKTRNDLPAEQQKVTALPDFIVHERDNRLDEYIIIACDGIWDVVSNDESVEIVSQIFMEGEKNIGFVCEEMLDLCLAKNSRDNMTACVVAFPGVHIGEGGGVAARWQAR 316
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: A0A7S2B8Y2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B8Y2_9STRA) HSP 1 Score: 281 bits (720), Expect = 3.570e-88 Identity = 163/354 (46.05%), Postives = 218/354 (61.58%), Query Frame = 1
Query: 28 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCKVTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKA--GKGRGVAGRRAARE-AEQAQKESRRDD 1080
G LDKP TD E+ +G+++G S+MQGWR EMED+HTI +PGL +H+ AV+DGHGG A YA + ++ L+ P Y AYV G + LL +AL A+L++D L+ +RA +ERSGCTA++ VI+P+HIVVA+AGDSR+ + G A +EDHKPY+AEEK RIEAAGG VSM+RVDG+LAVSRALGDFQ+K +L ++ KVT PD + +R+ DE ++L CDG+WDVM N+ + GEA L CEE++ CL R SRDNMSVV + F A +A G GV G R RE AE+A+ E+ ++D
Sbjct: 2 GNLLDKPNTDYLEAEEGEGNGIKYGVSSMQGWRTEMEDAHTITPEIPGLTDHALYAVFDGHGGQYAARYASEHLVDELKIAPSYIAYV--DGGNADPALLGQALQEAFLNLDSNLRD-ETRAM---------------------------QNERSGCTAIATVISPSHIVVANAGDSRSAMQVGSETVALSEDHKPYNAEEKNRIEAAGGCVSMKRVDGELAVSRALGDFQFKDANLDAKDTKVTAFPDITIVQRSEADEFVILACDGIWDVMTNEQATKQMTSYCEQGEASPRLMCEEMMCDCLERSSRDNMSVVTLIFPAGEALTKAGEGVMGLRKVREEAEKAKAEAAKND 325
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: A0A4D9CRJ3_9STRA (PPM-type phosphatase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRJ3_9STRA) HSP 1 Score: 277 bits (708), Expect = 2.890e-86 Identity = 163/344 (47.38%), Postives = 215/344 (62.50%), Query Frame = 1
Query: 28 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAM-PGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCKVTCVPDTLVYRRTPGDEL-LLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKAL--KAGK-GRGVAGRRAARE 1044
G+ L KP+T+K++ E + GL FGA+AMQGWRVEMED+HT+I M P L HSF+AVYDGHGG A YAGK M F+R T Y Y ++V L A+++A+L++DE+L K++ E + SGCTA+ A+ITP+H+VVA+AGDSRA++ + + DHKPY +E+ RIE+AGG VSM+RVDGDLA+SR+LGDFQ+K R+L P KVT VP+ V+ R +L LLL CDGVWDV + + R +I DGE R+ L EEL+D CL R S+DNMS V+V F L + GK G GV GRR R+
Sbjct: 2 GSHLAKPITEKESYESNAH-GLNFGAAAMQGWRVEMEDAHTVIETMDPELEGHSFIAVYDGHGGQYSAIYAGKHMADFVRRTVAYTEYKTT----KDVAHLQTAIHSAFLNLDESL-KLQD--------------------------EFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDSEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRQ 313
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: A0A7S2WUD6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUD6_9STRA) HSP 1 Score: 267 bits (682), Expect = 2.130e-82 Identity = 158/368 (42.93%), Postives = 222/368 (60.33%), Query Frame = 1
Query: 28 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCKVTCVPDTLVYRRTPG-DELLLLCCDGVWDVMNNDDCQRCAMEIFAD-GEARVGLACEELIDTCLARGSRDNMSVVMVAFKA---LKAGKGRGVAGRRAAREAEQAQKESRRDDPDFDPASAGNSS 1116
G+ LDKP T+ ++ + +GL++G S+MQGWR+EMED+HTI + GLP HS AV+DGHGG A +A + ++ L ++AYVA N+ELL +A+ A+L++D+ ++ V ++ERSGCTA++ ++TP H+V A+AGDSR ++ G+ + DHKP+ EE+ RIE+AGG VSM+RVDG+LAVSRALGDFQYKS +L P+ KVT PD + + R PG D+ ++L CDG+WDVM N D GEA L EE++ CLA+ SRDNMSVV+V F+A + AG G G+ G R RE QA +E R+ + A AGN +
Sbjct: 2 GSLLDKPNTEYIHADEGAANGLKYGVSSMQGWRMEMEDAHTIEPDVVGLPGHSLFAVFDGHGGHNAAVFASEHLLPCLTKLDKFKAYVADQT---NLELLKQAMQEAFLEVDKDMR----------------------------VDFQPRSTERSGCTAIAVMVTPTHLVCANAGDSRGLLSRSGKNVELSFDHKPWKDEERERIESAGGCVSMKRVDGELAVSRALGDFQYKSEELDPKMTKVTAYPDVIAHERVPGEDQFVVLACDGIWDVMENPDVIASVDTYMTKLGEANPRLMAEEMMCECLAKQSRDNMSVVVVLFEAGQAMVAGAGDGIEGLRTQRE--QALEEGRKAE-----ADAGNGA 331
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: A0A1V9ZVL1_9STRA (Phosphatase 2C n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVL1_9STRA) HSP 1 Score: 246 bits (629), Expect = 1.550e-74 Identity = 141/340 (41.47%), Postives = 191/340 (56.18%), Query Frame = 1
Query: 28 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSR-DLLPRNCKVTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKAGKGRGVAGRRAARE 1044
G FL P+T+K+T +GL + S MQGWR MED+H T +P + S AV+DGHGG + A ++ + L + ++ + KA+ A+L++DE + RA ++ S + SGCTA++A +TP HI+VA++GDSR+++ +GG V + DHKP + +E+ RIE AGG V RV+GDLAVSRALGDF YK R DL P +V+ PD R+ DE L+L CDG+WDVM NDD + GE+ +GL CEEL+D CL GSRDNMSVV+V F K G G GV G R ARE
Sbjct: 2 GNFLSSPITEKETHVGMG-NGLAYAVSCMQGWRATMEDAHIARTVIPSFGDCSIFAVFDGHGGKLIADHSAMSLTEVLEKHNNV-------GKEKDPNEIGKAMGKAFLELDE-----KHRALTQIV----------------------SGEDHSGCTAIAAFVTPTHIIVANSGDSRSVLSTGGTVVPMSFDHKPNNEKERMRIENAGGSVRNNRVNGDLAVSRALGDFVYKQRSDLKPEEQQVSAEPDIKTQHRSKEDEFLILACDGIWDVMTNDDACDFVRSLMNKGESNMGLICEELLDHCLQLGSRDNMSVVIVKFAGAKIGTGEGVMGLRKARE 306
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Match: A0A024UCH5_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCH5_9STRA) HSP 1 Score: 246 bits (627), Expect = 2.730e-74 Identity = 142/342 (41.52%), Postives = 195/342 (57.02%), Query Frame = 1
Query: 28 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCK-VTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKAGKGRGVAGRRAAREAE 1050
G FL P+T+KDT T +GL FG S MQGWR MED+H T++P S AV+DGHGG + A + + ++ L + +N + + ++L A+L +D+ ++++ E + SGCTA++A +T IVVA++GDSR+++ + G V + DHKP + E+ RIE AGG V RV+GDLAVSRALGDF YK R LP + V+ PD V RT DE LLL CDG+WDVM+N+D + A GE+ +GL CEE++D CL+ GSRDNMS+V+V F K G+G GVAG R REAE
Sbjct: 2 GNFLSSPITEKDTHVGTG-NGLEFGVSCMQGWRATMEDAHVARTSIPAFDRCSIFAVFDGHGGKLVADESAQNLIDVLEK---------EVMDVKNKDDIGRSLTRAFLALDDDHRRLK---------------------------EVIGGEDHSGCTAIAAFVTDLFIVVANSGDSRSVLATDGGVIPMSYDHKPNNTGERQRIENAGGSVRNNRVNGDLAVSRALGDFIYKQRPDLPAAAQQVSAEPDVKVAERTKEDEFLLLACDGIWDVMSNEDAVALVRSLMAQGESNMGLICEEVLDHCLSLGSRDNMSIVVVKFPGAKIGQGDGVAGIRKIREAE 306 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347472 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3766 ID=mRNA_3766|Name=jgi.p|Trimin1|347472|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1431bp|location=Sequence derived from alignment at Contig_12:701640..710475- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACAATGCATATGTACGTGTGCTGGGGGACGTTCTTGGATAAGCCCGTback to top protein sequence of jgi.p|Trimin1|347472 >Trimin1|347472|estExt_Genemark1.C_Ctg_120095 ID=Trimin1|347472|estExt_Genemark1.C_Ctg_120095|Name=jgi.p|Trimin1|347472|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=379bp MTMHMYVCWGTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTback to top mRNA from alignment at Contig_12:701640..710475- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3766 ID=mRNA_3766|Name=jgi.p|Trimin1|347472|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8836bp|location=Sequence derived from alignment at Contig_12:701640..710475- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_12:701640..710475- >mRNA_3766 ID=mRNA_3766|Name=jgi.p|Trimin1|347472|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1137bp|location=Sequence derived from alignment at Contig_12:701640..710475- (Tribonema minus UTEX_B_3156 )back to top |