mRNA_3564 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347210
Unique NamemRNA_3564
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A835YHS7_9STRA (Acid phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHS7_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 9.150e-142
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
Query:    1 MRTKRKSSSGKVDIPAIEARLTELLDDGPLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASGGD 756
            MRTKRKSSSGKVDIPAIEARLTELLDDGPLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASGGD
Sbjct:    1 MRTKRKSSSGKVDIPAIEARLTELLDDGPLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASGGD 252          
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A1S3AN36_ERIEU (magnesium-dependent phosphatase 1 isoform X1 n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3AN36_ERIEU)

HSP 1 Score: 136 bits (342), Expect = 6.530e-35
Identity = 78/220 (35.45%), Postives = 101/220 (45.91%), Query Frame = 1
Query:   91 PKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
            PK+ VFD+DYTLWP W+DTH   PPF K+  G   DR G  I L P    V+  L    V +  ASRT E E A + LKL D+  H                                                             +REIYPG K THF R+Q   G VPF  M+FFDDE RN+ +V++LGV C H+ + + ++T   GLEAF ++ +G
Sbjct:    5 PKLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTIRDRRGQTILLYPEVPEVLERLQIAKVPVAAASRTGEIEGANQLLKLFDLARHF-----------------------------------------------------------VHREIYPGSKVTHFERLQQKTG-VPFSQMIFFDDERRNISDVSQLGVTCIHVQNGMTLQTLTEGLEAFAKTQAG 163          
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: M3WYE8_FELCA (Magnesium-dependent phosphatase 1 n=7 Tax=Feliformia TaxID=379583 RepID=M3WYE8_FELCA)

HSP 1 Score: 135 bits (341), Expect = 9.140e-35
Identity = 77/221 (34.84%), Postives = 103/221 (46.61%), Query Frame = 1
Query:   88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
            LPK+VVFD+DYTLWP W+DTH   PPF K   G   DR G  + L P  R V+  L    V +  ASRT E E A + L+L D+  +                                                             +REIYPG K THF R+Q   G V F  M+FFDDE RN+L+V++LGV C H+ + + ++T + GLE F ++ +G
Sbjct:    4 LPKLVVFDLDYTLWPFWVDTHV-DPPFHKGSDGAVRDRRGQTVRLYPEVRDVLERLQGLEVPVAAASRTGEIEGANQLLELFDLDRYF-----------------------------------------------------------VHREIYPGSKVTHFERLQQKTG-VVFSQMIFFDDEKRNILDVSKLGVTCIHVQNGMNLQTLSQGLETFAKAQAG 163          
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: MGDP1_MOUSE (Magnesium-dependent phosphatase 1 n=9 Tax=Tetrapoda TaxID=32523 RepID=MGDP1_MOUSE)

HSP 1 Score: 135 bits (339), Expect = 1.790e-34
Identity = 77/221 (34.84%), Postives = 102/221 (46.15%), Query Frame = 1
Query:   88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
            LPK+ VFD+DYTLWP W+DTH   PPF K+  G   DR G +I L P    V+  L +  V +  ASRT E + A + L+L D+  +                                                              REIYPG K THF R+    G VPF  M+FFDDE+RN+++V RLGV C HI D + ++T   GLE F ++ +G
Sbjct:    4 LPKLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ-----------------------------------------------------------REIYPGSKVTHFERLHHKTG-VPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKAQAG 163          
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: F1MXF2_BOVIN (Uncharacterized protein n=19 Tax=Pecora TaxID=35500 RepID=F1MXF2_BOVIN)

HSP 1 Score: 134 bits (336), Expect = 4.900e-34
Identity = 77/221 (34.84%), Postives = 101/221 (45.70%), Query Frame = 1
Query:   88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
            LPK+ VFD+DYTLWP W+DTH   PPF K   G   DR G  I L P    V+  L    V I  ASRT E E A + L+L D+  +                                                             +REIYPG K THF R+Q   G VPF  M+FFDDE RN+++V++LGV C H+   + ++T   GL+AF ++ +G
Sbjct:    4 LPKLAVFDLDYTLWPFWVDTHV-DPPFHKNSDGTVRDRRGQSIQLYPEVPEVLERLRGLGVPIAAASRTGEVEGANQLLELFDLVRYF-----------------------------------------------------------VHREIYPGSKVTHFERLQRKTG-VPFSQMIFFDDEKRNIVDVSKLGVTCIHVQHGMSLQTLTQGLDAFTKAQAG 163          
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A287B391_PIG (Magnesium dependent phosphatase 1 n=4 Tax=Suina TaxID=35497 RepID=A0A287B391_PIG)

HSP 1 Score: 133 bits (335), Expect = 6.850e-34
Identity = 75/221 (33.94%), Postives = 101/221 (45.70%), Query Frame = 1
Query:   88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
            LPK+ VFD+DYTLWP W+DTH   PPF K+  G   DR G  + L P    V+  L    V +  ASRT E E A + L+L D+  H                                                             +REIYPG K THF R+    G VPF  M+FFDDE RN+++V++LGV C H+ + + ++T   GLE F ++ +G
Sbjct:    4 LPKLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTIRDRRGQTVRLYPEVPEVLERLQGLGVPVAAASRTGEVEGANQLLELFDLVRHF-----------------------------------------------------------VHREIYPGSKVTHFERLHRKTG-VPFSQMIFFDDEKRNIVDVSKLGVACVHVQNGMNLQTLTQGLEVFAKAQAG 163          
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: UPI0003330CAC (magnesium-dependent phosphatase 1 n=1 Tax=Jaculus jaculus TaxID=51337 RepID=UPI0003330CAC)

HSP 1 Score: 132 bits (333), Expect = 1.340e-33
Identity = 74/221 (33.48%), Postives = 103/221 (46.61%), Query Frame = 1
Query:   88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
            LP++ VFD+DYTLWP W+DTH   PPF K+  G   DR G ++ L P    V+  L    V +  ASRT E E A++ L+L D+  +                                                             +REIYPG K THF R+Q   G +PF  M+FFDDE+RN+ +V +LGV C HI + + ++T   GLE F ++ +G
Sbjct:    4 LPELAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTIRDRRGQNVRLYPEVPEVLERLQGLGVSVAAASRTGEIEGAKQLLELFDLDRYF-----------------------------------------------------------IHREIYPGSKVTHFERLQQKTG-IPFSQMVFFDDENRNIADVGKLGVTCIHIQNGMSLQTLIQGLEMFAKTQAG 163          
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A1U7R4E3_MESAU (magnesium-dependent phosphatase 1 n=11 Tax=Cricetidae TaxID=337677 RepID=A0A1U7R4E3_MESAU)

HSP 1 Score: 132 bits (332), Expect = 1.870e-33
Identity = 75/223 (33.63%), Postives = 102/223 (45.74%), Query Frame = 1
Query:   82 GPLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
             PLPK+ VFD+DYTLWP W+DTH   PPF K+  G   DR G +I L P    V+  L +  V +  ASRT E E A + L+L D+  +                                                             +REIYPG K  HF R+    G VPF  M+FFDDE RN+++V +LGV C H+ + + ++T   GLE F ++ +G
Sbjct:    2 APLPKLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTVRDRRGQNIRLYPEVPEVLERLRSLGVPVAAASRTGEIEGANQLLELFDLVKYFG-----------------------------------------------------------HREIYPGSKVAHFERLHHKTG-VPFSQMVFFDDEERNIIDVGKLGVSCIHVQNGMNLQTLTQGLETFAKAQAG 163          
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A250YAV5_CASCN (Magnesium-dependent phosphatase 1 n=2 Tax=Castor canadensis TaxID=51338 RepID=A0A250YAV5_CASCN)

HSP 1 Score: 132 bits (332), Expect = 1.870e-33
Identity = 76/221 (34.39%), Postives = 103/221 (46.61%), Query Frame = 1
Query:   88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
            LP++ VFD+DYTLWP W+DTH   PPF K+  G   DR G ++ L P   +V+  L    V I  ASRT E E A + L+L D+  +                                                             +REIYPG K THF R+Q   G VPF  M+FFDDE RN+++V +LGV C H+ + + ++T A GLE F  + +G
Sbjct:    4 LPRLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTVRDRLGQNVRLYPEVPAVLDRLQGLGVPIAAASRTGEIEGASQLLELFDLVRYF-----------------------------------------------------------VHREIYPGSKVTHFERLQQKTG-VPFSQMVFFDDEKRNIVDVGKLGVTCIHVHNGMSLQTLAQGLETFANARAG 163          
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: H0XTF1_OTOGA (Uncharacterized protein n=12 Tax=Boreoeutheria TaxID=1437010 RepID=H0XTF1_OTOGA)

HSP 1 Score: 132 bits (331), Expect = 2.620e-33
Identity = 75/219 (34.25%), Postives = 101/219 (46.12%), Query Frame = 1
Query:   85 PLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRS 741
            PLP++ VFD+DYTLWP W+DTH   PPF K+  G   DR   H+ L P    V+  L    V    ASRT E E A + L+L D+  +                                                            A+REIYPG K THF R+Q   G VPF  M+FFDDE RN+++V++LGV C H+ + + ++T   GLE F ++
Sbjct:    3 PLPRLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTVRDRRNKHVRLYPEVPEVLERLQRLGVPGAAASRTGEIEGANQLLELFDLVKYF-----------------------------------------------------------AHREIYPGSKVTHFERLQQKTG-VPFSQMIFFDDERRNIVDVSKLGVTCIHVQNGMNLQTLTQGLETFAKA 160          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YHS7_9STRA9.150e-142100.00Acid phosphatase-domain-containing protein n=1 Tax... [more]
A0A1S3AN36_ERIEU6.530e-3535.45magnesium-dependent phosphatase 1 isoform X1 n=1 T... [more]
M3WYE8_FELCA9.140e-3534.84Magnesium-dependent phosphatase 1 n=7 Tax=Feliform... [more]
MGDP1_MOUSE1.790e-3434.84Magnesium-dependent phosphatase 1 n=9 Tax=Tetrapod... [more]
F1MXF2_BOVIN4.900e-3434.84Uncharacterized protein n=19 Tax=Pecora TaxID=3550... [more]
A0A287B391_PIG6.850e-3433.94Magnesium dependent phosphatase 1 n=4 Tax=Suina Ta... [more]
UPI0003330CAC1.340e-3333.48magnesium-dependent phosphatase 1 n=1 Tax=Jaculus ... [more]
A0A1U7R4E3_MESAU1.870e-3333.63magnesium-dependent phosphatase 1 n=11 Tax=Criceti... [more]
A0A250YAV5_CASCN1.870e-3334.39Magnesium-dependent phosphatase 1 n=2 Tax=Castor c... [more]
H0XTF1_OTOGA2.620e-3334.25Uncharacterized protein n=12 Tax=Boreoeutheria Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:741799..743589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347210|estExt_Genemark1.C_Ctg_90067
BRITEko00000,ko01000,ko01009
KEGG koko:K17619
EC3.1.3.48
GOsGO:0003674,GO:0003824,GO:0006040,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030389,GO:0042578,GO:0044237,GO:0071704,GO:1901135
Preferred nameMDP1
Descriptionfructosamine metabolic process
COG categoryO
Max annot lvl33208|Metazoa
EggNOG OGsKOG4549@1|root,KOG4549@2759|Eukaryota,39WE6@33154|Opisthokonta,3BK9R@33208|Metazoa,3D3RU@33213|Bilateria,48339@7711|Chordata,490P7@7742|Vertebrata,3J3XJ@40674|Mammalia
Evalue2.27e-37
Seed ortholog9365.XP_007537631.1
Hectar predicted targeting categoryother localisation
TranscriptId347532
TrackFilteredModels1
ProteinId347210
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347210gene_3564Tribonema minus UTEX_B_3156 geneContig_9 741799..743589 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3564_2exon_3564_2Tribonema minus UTEX_B_3156 exonContig_9 741799..742894 -
exon_3564_1exon_3564_1Tribonema minus UTEX_B_3156 exonContig_9 743448..743589 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3564UTR3_3564Tribonema minus UTEX_B_3156 three_prime_UTRContig_9 741799..742277 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3564CDS_3564Tribonema minus UTEX_B_3156 CDSContig_9 743448..743589 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347210Trimin1|347210|estExt_Genemark1.C_Ctg_90067Tribonema minus UTEX_B_3156 polypeptideContig_9 742278..743589 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3564 ID=mRNA_3564|Name=jgi.p|Trimin1|347210|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1238bp|location=Sequence derived from alignment at Contig_9:741799..743589- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGACCAAGAGGAAGAGCAGCAGCGGCAAGGTGGACATCCCCGCTAT
CGAGGCACGCCTCACGGAGCTGCTTGATGACGGGCCATTGCCTAAAATCG
TGGTCTTCGACATAGACTACACCTTGTGGCCGCTTTGGATAGACACGCAC
TGCGCGGGGCCGCCCTTCCGAAAAGCCGAGCGCGGCGGCTTCCTCGACCG
CGGCGGCGGGCACATCGACCTCGCGCCGCACGCGCGGAGCGTCATCGCGG
CGCTGCACGCGCGCAGCGTCGAAATCGGCCTCGCAAGCCGAACGGACGAG
CCCGAGTGGGCGGAGGAGGGCCTGAAGCTGATCGACGTGCAGACGCACAG
CAGCAACGGCGGCAATGGTGGCAGCGGCGGTGGCAGCAGCGGCAGCGGCC
ACATTGGCAGCAGCGGCGGTGGCGGCGGCAGCGGCGGCAGTAGCGGCGGC
GGCGGCGGCAGCGGCAGCGGTGGCGGCAGCAGCGGCAGCGGCAGCGGCGG
CAGCGTCATGACGTTGCACGCCCTCGCCGCGTACCGCGAGATCTACCCCG
GCGGCAAGACGACGCACTTTCGGCGCATCCAGGCGGCGGCGGGCGGCGTG
CCGTTTGGCGATATGCTGTTTTTCGACGACGAGCACAGGAACGTTCTCGA
GGTGGCACGGCTAGGCGTCGTGTGCCACCACATTCCCGACTGCATCTGCG
TCGAGACGTTTGCGGCGGGGCTCGAGGCGTTCCGGCGAAGCGCCAGCGGC
GGCGACTGAAGTGTTGAATCCTTGGATTTGATCACAATCTTTGGACTTTG
CGTCCACGGGGGGGGCGCTTTTCAGTTCCATTTCGTCAACAACTTCAAGC
ATTGCGCGTCGCGCTGCTGAAGGCAACCTCAACAGCGGGTTGGTGGTGGG
TAGTGGGTCCCTGAGTGGGGTCCAACCGCAACCGTTTCTGCGCTTTCTTG
TGTAATCTGGTTCAGCCGGTTGATCCGCGATCGAACAAGCCATGGCACAT
CCTTCTTGGGTCTCGCACGTACATGGTGCGGAAGGGCTCATCTCTGCAAA
GGCGGCGCGCATCCATTGCGAGTTTTTGCGCGTGCATGATGCTGCAACCA
CGCACACCGGACGCGAACTGCGCACATCTGCTGTAAAGCGTCGCCTTCAC
CTCTGCGCTCAGCCGCCTGTTGCTTCAGCCATGAACGCTCCCAGGCGCAC
AAATGACACGGGACAATTCCTGTGCAATGCTGTCAGGC
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protein sequence of jgi.p|Trimin1|347210

>Trimin1|347210|estExt_Genemark1.C_Ctg_90067 ID=Trimin1|347210|estExt_Genemark1.C_Ctg_90067|Name=jgi.p|Trimin1|347210|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=253bp
MRTKRKSSSGKVDIPAIEARLTELLDDGPLPKIVVFDIDYTLWPLWIDTH
CAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDE
PEWAEEGLKLIDVQTHSSNGGNGGSGGGSSGSGHIGSSGGGGGSGGSSGG
GGGSGSGGGSSGSGSGGSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGV
PFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG
GD*
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mRNA from alignment at Contig_9:741799..743589-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3564 ID=mRNA_3564|Name=jgi.p|Trimin1|347210|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1791bp|location=Sequence derived from alignment at Contig_9:741799..743589- (Tribonema minus UTEX_B_3156 )
ATGAGGACCAAGAGGAAGAGCAGCAGCGGCAAGGTGGACATCCCCGCTAT CGAGGCACGCCTCACGGAGCTGCTTGATGACGGGCCATTGCCTAAAATCG TGGTCTTCGACATAGACTACACCTTGTGGCCGCTTTGGATAGGTACGCTC TTGGAAAGAGGACGAGCATTCCTGCGGTCAAAGATGACCGGATGTGGCAG GATGTCAGGATCTGCCTGCCTGTGTGTTGCACTGTGCGTGGCTGCTGATC AGAAGGGCTGGTAGTACCGGCTGGAGCACCAACCTACTGATTCGTAGATA CGAGTACAAACTGTCGCGATCAGCATCTGCAACTCTCACGCTTCTGCGAA GGCGTCGTCATGTATACTGTGCCTGTGGATGCTCACAAGATTTGAAGTCG AACTTCAATCTCTGACTGTCGTATTCTCCACACAGTTGCTGCCGTGCACA GCAGACCAGCTCTGCGTGGCGACAGCAGCCCGTCTGGAATGCTGATGATG GCAGCACTGTCACCTGCGGCCACGCCAGATTACAGCACCACCAACACACC TCCACCCCCCTGTGACTCCCCCCAGTGTCACCGGCACGCCTGTGCAGGAA GCTGCGACAAGCACTCAACTCCCGTGACCTGCCCCGCCTATTCGACTTCA AACCTGAAGTTCCCCTCCCTGCCACGCCCCCTTCCTGAGCCGCAGACACG CACTGCGCGGGGCCGCCCTTCCGAAAAGCCGAGCGCGGCGGCTTCCTCGA CCGCGGCGGCGGGCACATCGACCTCGCGCCGCACGCGCGGAGCGTCATCG CGGCGCTGCACGCGCGCAGCGTCGAAATCGGCCTCGCAAGCCGAACGGAC GAGCCCGAGTGGGCGGAGGAGGGCCTGAAGCTGATCGACGTGCAGACGCA CAGCAGCAACGGCGGCAATGGTGGCAGCGGCGGTGGCAGCAGCGGCAGCG GCCACATTGGCAGCAGCGGCGGTGGCGGCGGCAGCGGCGGCAGTAGCGGC GGCGGCGGCGGCAGCGGCAGCGGTGGCGGCAGCAGCGGCAGCGGCAGCGG CGGCAGCGTCATGACGTTGCACGCCCTCGCCGCGTACCGCGAGATCTACC CCGGCGGCAAGACGACGCACTTTCGGCGCATCCAGGCGGCGGCGGGCGGC GTGCCGTTTGGCGATATGCTGTTTTTCGACGACGAGCACAGGAACGTTCT CGAGGTGGCACGGCTAGGCGTCGTGTGCCACCACATTCCCGACTGCATCT GCGTCGAGACGTTTGCGGCGGGGCTCGAGGCGTTCCGGCGAAGCGCCAGC GGCGGCGACTGAAGTGTTGAATCCTTGGATTTGATCACAATCTTTGGACT TTGCGTCCACGGGGGGGGCGCTTTTCAGTTCCATTTCGTCAACAACTTCA AGCATTGCGCGTCGCGCTGCTGAAGGCAACCTCAACAGCGGGTTGGTGGT GGGTAGTGGGTCCCTGAGTGGGGTCCAACCGCAACCGTTTCTGCGCTTTC TTGTGTAATCTGGTTCAGCCGGTTGATCCGCGATCGAACAAGCCATGGCA CATCCTTCTTGGGTCTCGCACGTACATGGTGCGGAAGGGCTCATCTCTGC AAAGGCGGCGCGCATCCATTGCGAGTTTTTGCGCGTGCATGATGCTGCAA CCACGCACACCGGACGCGAACTGCGCACATCTGCTGTAAAGCGTCGCCTT CACCTCTGCGCTCAGCCGCCTGTTGCTTCAGCCATGAACGCTCCCAGGCG CACAAATGACACGGGACAATTCCTGTGCAATGCTGTCAGGC
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Coding sequence (CDS) from alignment at Contig_9:741799..743589-

>mRNA_3564 ID=mRNA_3564|Name=jgi.p|Trimin1|347210|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=759bp|location=Sequence derived from alignment at Contig_9:741799..743589- (Tribonema minus UTEX_B_3156 )
ATGAGGACCAAGAGGAAGAGCAGCAGCGGCAAGGTGGACATCCCCGCTAT
CGAGGCACGCCTCACGGAGCTGCTTGATGACGGGCCATTGCCTAAAATCG
TGGTCTTCGACATAGACTACACCTTGTGGCCGCTTTGGATAGACACGCAC
TGCGCGGGGCCGCCCTTCCGAAAAGCCGAGCGCGGCGGCTTCCTCGACCG
CGGCGGCGGGCACATCGACCTCGCGCCGCACGCGCGGAGCGTCATCGCGG
CGCTGCACGCGCGCAGCGTCGAAATCGGCCTCGCAAGCCGAACGGACGAG
CCCGAGTGGGCGGAGGAGGGCCTGAAGCTGATCGACGTGCAGACGCACAG
CAGCAACGGCGGCAATGGTGGCAGCGGCGGTGGCAGCAGCGGCAGCGGCC
ACATTGGCAGCAGCGGCGGTGGCGGCGGCAGCGGCGGCAGTAGCGGCGGC
GGCGGCGGCAGCGGCAGCGGTGGCGGCAGCAGCGGCAGCGGCAGCGGCGG
CAGCGTCATGACGTTGCACGCCCTCGCCGCGTACCGCGAGATCTACCCCG
GCGGCAAGACGACGCACTTTCGGCGCATCCAGGCGGCGGCGGGCGGCGTG
CCGTTTGGCGATATGCTGTTTTTCGACGACGAGCACAGGAACGTTCTCGA
GGTGGCACGGCTAGGCGTCGTGTGCCACCACATTCCCGACTGCATCTGCG
TCGAGACGTTTGCGGCGGGGCTCGAGGCGTTCCGGCGAAGCGCCAGCGGC
GGCGACTGA
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