mRNA_3564 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A835YHS7_9STRA (Acid phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHS7_9STRA) HSP 1 Score: 413 bits (1061), Expect = 9.150e-142 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
Query: 1 MRTKRKSSSGKVDIPAIEARLTELLDDGPLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASGGD 756
MRTKRKSSSGKVDIPAIEARLTELLDDGPLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASGGD
Sbjct: 1 MRTKRKSSSGKVDIPAIEARLTELLDDGPLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASGGD 252
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A1S3AN36_ERIEU (magnesium-dependent phosphatase 1 isoform X1 n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3AN36_ERIEU) HSP 1 Score: 136 bits (342), Expect = 6.530e-35 Identity = 78/220 (35.45%), Postives = 101/220 (45.91%), Query Frame = 1
Query: 91 PKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
PK+ VFD+DYTLWP W+DTH PPF K+ G DR G I L P V+ L V + ASRT E E A + LKL D+ H +REIYPG K THF R+Q G VPF M+FFDDE RN+ +V++LGV C H+ + + ++T GLEAF ++ +G
Sbjct: 5 PKLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTIRDRRGQTILLYPEVPEVLERLQIAKVPVAAASRTGEIEGANQLLKLFDLARHF-----------------------------------------------------------VHREIYPGSKVTHFERLQQKTG-VPFSQMIFFDDERRNISDVSQLGVTCIHVQNGMTLQTLTEGLEAFAKTQAG 163
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: M3WYE8_FELCA (Magnesium-dependent phosphatase 1 n=7 Tax=Feliformia TaxID=379583 RepID=M3WYE8_FELCA) HSP 1 Score: 135 bits (341), Expect = 9.140e-35 Identity = 77/221 (34.84%), Postives = 103/221 (46.61%), Query Frame = 1
Query: 88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
LPK+VVFD+DYTLWP W+DTH PPF K G DR G + L P R V+ L V + ASRT E E A + L+L D+ + +REIYPG K THF R+Q G V F M+FFDDE RN+L+V++LGV C H+ + + ++T + GLE F ++ +G
Sbjct: 4 LPKLVVFDLDYTLWPFWVDTHV-DPPFHKGSDGAVRDRRGQTVRLYPEVRDVLERLQGLEVPVAAASRTGEIEGANQLLELFDLDRYF-----------------------------------------------------------VHREIYPGSKVTHFERLQQKTG-VVFSQMIFFDDEKRNILDVSKLGVTCIHVQNGMNLQTLSQGLETFAKAQAG 163
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: MGDP1_MOUSE (Magnesium-dependent phosphatase 1 n=9 Tax=Tetrapoda TaxID=32523 RepID=MGDP1_MOUSE) HSP 1 Score: 135 bits (339), Expect = 1.790e-34 Identity = 77/221 (34.84%), Postives = 102/221 (46.15%), Query Frame = 1
Query: 88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
LPK+ VFD+DYTLWP W+DTH PPF K+ G DR G +I L P V+ L + V + ASRT E + A + L+L D+ + REIYPG K THF R+ G VPF M+FFDDE+RN+++V RLGV C HI D + ++T GLE F ++ +G
Sbjct: 4 LPKLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ-----------------------------------------------------------REIYPGSKVTHFERLHHKTG-VPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKAQAG 163
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: F1MXF2_BOVIN (Uncharacterized protein n=19 Tax=Pecora TaxID=35500 RepID=F1MXF2_BOVIN) HSP 1 Score: 134 bits (336), Expect = 4.900e-34 Identity = 77/221 (34.84%), Postives = 101/221 (45.70%), Query Frame = 1
Query: 88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
LPK+ VFD+DYTLWP W+DTH PPF K G DR G I L P V+ L V I ASRT E E A + L+L D+ + +REIYPG K THF R+Q G VPF M+FFDDE RN+++V++LGV C H+ + ++T GL+AF ++ +G
Sbjct: 4 LPKLAVFDLDYTLWPFWVDTHV-DPPFHKNSDGTVRDRRGQSIQLYPEVPEVLERLRGLGVPIAAASRTGEVEGANQLLELFDLVRYF-----------------------------------------------------------VHREIYPGSKVTHFERLQRKTG-VPFSQMIFFDDEKRNIVDVSKLGVTCIHVQHGMSLQTLTQGLDAFTKAQAG 163
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A287B391_PIG (Magnesium dependent phosphatase 1 n=4 Tax=Suina TaxID=35497 RepID=A0A287B391_PIG) HSP 1 Score: 133 bits (335), Expect = 6.850e-34 Identity = 75/221 (33.94%), Postives = 101/221 (45.70%), Query Frame = 1
Query: 88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
LPK+ VFD+DYTLWP W+DTH PPF K+ G DR G + L P V+ L V + ASRT E E A + L+L D+ H +REIYPG K THF R+ G VPF M+FFDDE RN+++V++LGV C H+ + + ++T GLE F ++ +G
Sbjct: 4 LPKLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTIRDRRGQTVRLYPEVPEVLERLQGLGVPVAAASRTGEVEGANQLLELFDLVRHF-----------------------------------------------------------VHREIYPGSKVTHFERLHRKTG-VPFSQMIFFDDEKRNIVDVSKLGVACVHVQNGMNLQTLTQGLEVFAKAQAG 163
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: UPI0003330CAC (magnesium-dependent phosphatase 1 n=1 Tax=Jaculus jaculus TaxID=51337 RepID=UPI0003330CAC) HSP 1 Score: 132 bits (333), Expect = 1.340e-33 Identity = 74/221 (33.48%), Postives = 103/221 (46.61%), Query Frame = 1
Query: 88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
LP++ VFD+DYTLWP W+DTH PPF K+ G DR G ++ L P V+ L V + ASRT E E A++ L+L D+ + +REIYPG K THF R+Q G +PF M+FFDDE+RN+ +V +LGV C HI + + ++T GLE F ++ +G
Sbjct: 4 LPELAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTIRDRRGQNVRLYPEVPEVLERLQGLGVSVAAASRTGEIEGAKQLLELFDLDRYF-----------------------------------------------------------IHREIYPGSKVTHFERLQQKTG-IPFSQMVFFDDENRNIADVGKLGVTCIHIQNGMSLQTLIQGLEMFAKTQAG 163
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A1U7R4E3_MESAU (magnesium-dependent phosphatase 1 n=11 Tax=Cricetidae TaxID=337677 RepID=A0A1U7R4E3_MESAU) HSP 1 Score: 132 bits (332), Expect = 1.870e-33 Identity = 75/223 (33.63%), Postives = 102/223 (45.74%), Query Frame = 1
Query: 82 GPLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
PLPK+ VFD+DYTLWP W+DTH PPF K+ G DR G +I L P V+ L + V + ASRT E E A + L+L D+ + +REIYPG K HF R+ G VPF M+FFDDE RN+++V +LGV C H+ + + ++T GLE F ++ +G
Sbjct: 2 APLPKLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTVRDRRGQNIRLYPEVPEVLERLRSLGVPVAAASRTGEIEGANQLLELFDLVKYFG-----------------------------------------------------------HREIYPGSKVAHFERLHHKTG-VPFSQMVFFDDEERNIIDVGKLGVSCIHVQNGMNLQTLTQGLETFAKAQAG 163
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: A0A250YAV5_CASCN (Magnesium-dependent phosphatase 1 n=2 Tax=Castor canadensis TaxID=51338 RepID=A0A250YAV5_CASCN) HSP 1 Score: 132 bits (332), Expect = 1.870e-33 Identity = 76/221 (34.39%), Postives = 103/221 (46.61%), Query Frame = 1
Query: 88 LPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRSASG 750
LP++ VFD+DYTLWP W+DTH PPF K+ G DR G ++ L P +V+ L V I ASRT E E A + L+L D+ + +REIYPG K THF R+Q G VPF M+FFDDE RN+++V +LGV C H+ + + ++T A GLE F + +G
Sbjct: 4 LPRLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTVRDRLGQNVRLYPEVPAVLDRLQGLGVPIAAASRTGEIEGASQLLELFDLVRYF-----------------------------------------------------------VHREIYPGSKVTHFERLQQKTG-VPFSQMVFFDDEKRNIVDVGKLGVTCIHVHNGMSLQTLAQGLETFANARAG 163
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Match: H0XTF1_OTOGA (Uncharacterized protein n=12 Tax=Boreoeutheria TaxID=1437010 RepID=H0XTF1_OTOGA) HSP 1 Score: 132 bits (331), Expect = 2.620e-33 Identity = 75/219 (34.25%), Postives = 101/219 (46.12%), Query Frame = 1
Query: 85 PLPKIVVFDIDYTLWPLWIDTHCAGPPFRKAERGGFLDRGGGHIDLAPHARSVIAALHARSVEIGLASRTDEPEWAEEGLKLIDVQTHSSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXSVMTLHALAAYREIYPGGKTTHFRRIQAAAGGVPFGDMLFFDDEHRNVLEVARLGVVCHHIPDCICVETFAAGLEAFRRS 741
PLP++ VFD+DYTLWP W+DTH PPF K+ G DR H+ L P V+ L V ASRT E E A + L+L D+ + A+REIYPG K THF R+Q G VPF M+FFDDE RN+++V++LGV C H+ + + ++T GLE F ++
Sbjct: 3 PLPRLAVFDLDYTLWPFWVDTHV-DPPFHKSSDGTVRDRRNKHVRLYPEVPEVLERLQRLGVPGAAASRTGEIEGANQLLELFDLVKYF-----------------------------------------------------------AHREIYPGSKVTHFERLQQKTG-VPFSQMIFFDDERRNIVDVSKLGVTCIHVQNGMNLQTLTQGLETFAKA 160 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347210 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3564 ID=mRNA_3564|Name=jgi.p|Trimin1|347210|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1238bp|location=Sequence derived from alignment at Contig_9:741799..743589- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGGACCAAGAGGAAGAGCAGCAGCGGCAAGGTGGACATCCCCGCTATback to top protein sequence of jgi.p|Trimin1|347210 >Trimin1|347210|estExt_Genemark1.C_Ctg_90067 ID=Trimin1|347210|estExt_Genemark1.C_Ctg_90067|Name=jgi.p|Trimin1|347210|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=253bp MRTKRKSSSGKVDIPAIEARLTELLDDGPLPKIVVFDIDYTLWPLWIDTHback to top mRNA from alignment at Contig_9:741799..743589- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3564 ID=mRNA_3564|Name=jgi.p|Trimin1|347210|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1791bp|location=Sequence derived from alignment at Contig_9:741799..743589- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_9:741799..743589- >mRNA_3564 ID=mRNA_3564|Name=jgi.p|Trimin1|347210|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=759bp|location=Sequence derived from alignment at Contig_9:741799..743589- (Tribonema minus UTEX_B_3156 )back to top |