mRNA_3547 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A836C835_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C835_9STRA) HSP 1 Score: 1467 bits (3797), Expect = 0.000e+0 Identity = 840/840 (100.00%), Postives = 840/840 (100.00%), Query Frame = 1
Query: 1 MKLPEDAGGDTELCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQKPDAAWPTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLAHGPSHAAVTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMAQVAWTLDDPQWVEADPVLVSFGAMDLFNALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKSLYIFDSYFTQANLQWPPTIEPGPPNKDPPEEHHVFAPARRGAGAGNWDTAAAGAPGVVASYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAGRREPRPPAALVIGAAAISAWAVTEERLTPDSGGDSAGGDSGRLRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCNGDRASGTVLINSNAQFGELQLPNGTRTTIYDCDAWGGLGWGPVGGGALPAVSGATLLARMRVSWVNMTYDFKGETHGIMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRARLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALVGCLWCSVAMFVRNRPRQLDVDDDPVKCDSDDIEVEVMQTSQVTHPQQRSRRLIHVGEEEGAGGTGAMWLH 2520
MKLPEDAGGDTELCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQKPDAAWPTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLAHGPSHAAVTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMAQVAWTLDDPQWVEADPVLVSFGAMDLFNALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKSLYIFDSYFTQANLQWPPTIEPGPPNKDPPEEHHVFAPARRGAGAGNWDTAAAGAPGVVASYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAGRREPRPPAALVIGAAAISAWAVTEERLTPDSGGDSAGGDSGRLRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCNGDRASGTVLINSNAQFGELQLPNGTRTTIYDCDAWGGLGWGPVGGGALPAVSGATLLARMRVSWVNMTYDFKGETHGIMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRARLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALVGCLWCSVAMFVRNRPRQLDVDDDPVKCDSDDIEVEVMQTSQVTHPQQRSRRLIHVGEEEGAGGTGAMWLH
Sbjct: 1 MKLPEDAGGDTELCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQKPDAAWPTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLAHGPSHAAVTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMAQVAWTLDDPQWVEADPVLVSFGAMDLFNALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKSLYIFDSYFTQANLQWPPTIEPGPPNKDPPEEHHVFAPARRGAGAGNWDTAAAGAPGVVASYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAGRREPRPPAALVIGAAAISAWAVTEERLTPDSGGDSAGGDSGRLRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCNGDRASGTVLINSNAQFGELQLPNGTRTTIYDCDAWGGLGWGPVGGGALPAVSGATLLARMRVSWVNMTYDFKGETHGIMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRARLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALVGCLWCSVAMFVRNRPRQLDVDDDPVKCDSDDIEVEVMQTSQVTHPQQRSRRLIHVGEEEGAGGTGAMWLH 840
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A835ZD65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD65_9STRA) HSP 1 Score: 772 bits (1994), Expect = 5.550e-268 Identity = 493/976 (50.51%), Postives = 544/976 (55.74%), Query Frame = 1
Query: 97 GYPLGSAADLLFAARFQKPD-----AAWPTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLAHGPSHAAVTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMAQVAWTLDDPQWVEADPVLVSFGAM----------------------------DLFNALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKSLYIFDSYFTQANLQWPPTIEPGPPNKDPPEEHHVFAPARRGAGAGNWDTAAAGAPGVVASYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAGRR------------EPRPPAALVIGAAAISAWAVTEERLTPDSGGDSAGGDSGRLRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCNGDRASGTVLINSNAQFGELQLPNGTRTTIYDCDAWGGLGWGPVGGGALPAVSGATLLARMRVSWVNMTYDFKGETHGIMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRARLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFT---------------------------------------------------------------------------------------------------------------------------IALVGCLWCSVAMFVRNRPRQLDVDDDPVKCDSDDIEVEVMQTSQVTHPQQRSRRLIHVGEEEGAGGTGAMWLH 2520
GYPLGSAADLLFAARFQKPD +WPTTDRNVRAFMADYTLTLT+EQSRLDAYKQIKGTA+ D+FLCSDLECTVVA DLI+LAHGP +A VT AMGYVRF TTV+GLPMQFI+D+ M PVI PIAESDAS PSMAQVAWT DDPQWVEADP+LVSFGAM DLFN+LR+GNY TS +CV+IITFKHDWMDQQGW+TSH+C+S+SL+IFDSYFTQANL WPP +E K P E+ VF P GAGAGNWD AA VASYGRTLFCDA+MFRNVQTV AG+SSCSIADGAYAAAQP +A R+ P PP AL+IG AAISAW VTE+RL GG LRMEPYDY+TTDGG NP RG AVEGSSV NVGPAEALLRL LGWGPVG G LPAVSGA LL+RMRVSWV+MTY RPFGSSILSGINTT ASA+TVLSDVV+AELATTDT+YTRAGAFLLLSQTLVALLA YLGRHELV+FFRRARLP AA+ LT VVF FTI+TPPALVLVA+GSARATGADGSSST+RWVEGQAYGSGEYR+VGAVSVTLNAQH QVAN L+WLNF IALVG LWCSVA+F R + + ++PVK DD E M++SQ H +QRSRRLIH+G+ E T +WLH
Sbjct: 3 GYPLGSAADLLFAARFQKPDDPGLLGSWPTTDRNVRAFMADYTLTLTQEQSRLDAYKQIKGTADL----------------------------DIFLCSDLECTVVA-----------------------------------------------DLIYLAHGPRYATVTPAMGYVRFDTTVIGLPMQFIQDSSTMNPVIVPIAESDASATPSMAQVAWTFDDPQWVEADPILVSFGAMVRMIALSGNSTEATIVHMVDTLSRNRMVDLFNSLRIGNYMTSDRECVSIITFKHDWMDQQGWDTSHNCISESLFIFDSYFTQANLHWPPALELNDSTK-PAEKLSVFTPL--GAGAGNWDNAAVS----VASYGRTLFCDAAMFRNVQTVAAGSSSCSIADGAYAAAQPESSEYAKAQRKGDHDAQQLGGPPRPSPPVALIIGNAAISAWNVTEDRLLQPESVKVDGG----LRMEPYDYMTTDGGHNPMRGSAVEGSSVANVGPAEALLRLA--------------------------------------------------------------------LGWGPVGAGPLPAVSGAELLSRMRVSWVDMTYG------------RPFGSSILSGINTTRASAQTVLSDVVAAELATTDTSYTRAGAFLLLSQTLVALLATYLGRHELVFFFRRARLPVCAAQLLTVVVFAFTIITPPALVLVAEGSARATGADGSSSTVRWVEGQAYGSGEYRVVGAVSVTLNAQHSQVANGLIWLNFNKFMDIVFGSNQAQGGARDVQRVLESASQEKIDTYVVSGALDPTTHTLFSAAFDHFGAMSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDDIIYNFIIALVGWLWCSVAVFARRNNAKPEELEEPVKRSRDDAEE--MRSSQTVHQKQRSRRLIHMGDAETRD-TDTVWLH 809
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A836CAV9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV9_9STRA) HSP 1 Score: 330 bits (846), Expect = 1.400e-96 Identity = 282/870 (32.41%), Postives = 387/870 (44.48%), Query Frame = 1
Query: 25 GDTELCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQKPDAAW--PTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLAHGPSHAAVTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMAQVAWTLDDP--QWVEADPVLVSFGAMDLFNAL------------RMGNY-ETSGGKCVTIITFKHDWMDQQGWNTSH----DCVSKSLYIFDSYFTQA------------------------------------------------NLQWPPT--IEPGPPNKDPPEEHHVFAPARRGAGAGNWDTAAAGAPGVVASYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAGRREPRPPA--------ALVIGAAAISAWAVTEERLTPDSGGDSAGGDSGRLRMEPYDYLTTDGGR-NPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCNGDRA--SGTVLINSNAQFGELQLPNGTRTTIYDCDA-WGGLGWGPVGG--------GALPAVSGATLLAR---MRVSWVNMTYDFKGETHGIMGYARPF-GSSIL------SGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRA-RLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALVGCLWCS 2328
G + C +A+++GQ CN+V +GYPLG+ ADLL AARFQ AA +TD NV +ADY LT+ R +RLDA + ++GTA+ D+FLCSD +C V+A ++ + G + TLAMGY RFA +++ LP IR A ++TP + P+AES VA S +VAW L D +WV A+ V++ FGA+ F AL R G Y E G CV +I+FKH WMD GW TS+ D + +Y+FDSYF QA NLQWPP + G +VF P G GNW AA V SYG + C + M+ N QTV A SC A+G +AA+QP A +E +PP LV+GAAA+SAW ++E L D G + GG + M+P D+ + G NP RG G+ + V AL + ++ LPWC D A + + + + G + G + DC+ W LGWG V G G PA +G L +R SW ++ G + + F G +L +G+ + SA VLS AEL+ + T GA L+LSQTLVAL+A+Y R ELV FF R R+P LAA LT F+ I+TP L +A+ +A + DGS S +RWV QA G +Y +V AV++T A D A++LVW+N +A G +WCS
Sbjct: 43 GSSVFCADAIETGQAAGTCNLVSEGYPLGAGADLLMAARFQSFAAAGGAASTDHNVGGVLADYELTVARSNARLDAQRSLRGTAQV----------------------------DLFLCSDGDCNVIADVVHV----------------------------------------------VTEGKPNG--TLAMGYARFAHSLVALPAYHIR-ADSVTPRVFPVAESRRGVARS--KVAWALADASAEWVSANMVMMPFGALVRFLALSARSAELDLGVLRAGAYTEQQTGDCVIVISFKHPWMDAMGWGTSNCDPGDPAAAKVYVFDSYFAQASELPFYSMLSAVLVTADQCSFKGVIYTSIAATNLGMHCARRCCTRCQANLQWPPAKGVVGGGVG-------YVF-PLADEVGGGNWRDGAA-----VRSYGAAMVCGSEMYINQQTVGATRYSCVNAEGGWAASQPPSDEDLAAMVQEEQPPTDDPRWLPQLLVLGAAAVSAWEISEPFLDVD--GTTMGGQRRYVMMDPGDFPNSKGREENPVRGGG-GGAQDSGVFTNSALATFIKYG------------VLTSASRGDSALPWCETDAAKINRKTFVPDDLRRGYVAA-GGKLLALQDCEVLWPLLGWGNVHGAGADAIQRGGAPAATGVRGLLEAGLLRPSWTDLEESPNGNPYNTDTWGNSFVGGGVLLVSALPAGVAAVVTSAEAVLSSFCDAELSNMEMTLTPMGAALVLSQTLVALIASYAARRELVGFFARVLRMPLLAASLLTVAAFLIGIMTPAVLTAIAESAAHDSNPDGSDSQVRWVHAQANGLAQYNVVAAVTMTFQADTDDSASLLVWVNLALAAFGWVWCS 804
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A836CDF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDF0_9STRA) HSP 1 Score: 299 bits (765), Expect = 1.030e-85 Identity = 264/832 (31.73%), Postives = 369/832 (44.35%), Query Frame = 1
Query: 16 DAGGDTE---LCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQ--KPDAAWPTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLAHGPSHAA-VTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMA----QVAWTL-DDPQWVEADPVLVSFGAM---------DLFNALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKSLYIFDSYFTQANLQWPPTIEPGPPNKDPPEEHHV------------------FAPARRGAGAGNWDTAAA------------GAPGVVASYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAGRREPRPPAA----LVIGAAAISAWAVTEERLTPDSGGDSAGGDSGRLRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPA--EALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCNGDRASGTVLINSNAQFGELQLPNGTRTTI--YDCDAWGGLGWGPVG--GGALPAVSGATLLARMRVSWVNMTYDFKGETHG--IMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRARLP----RLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALVG 2313
+A GD +CG+A+ SGQ V++CN+VG+GYP+ SAA LL A RF+ + D +T+ NV +AD+T+ ++R S D KQI GT + D+FLCSD CTVV DL ++A + AA TLAMGY RF ++ G+ F+ T + + ++++AP + QV W L D+ V+A PVL+ G + +N LR G+Y TS G CVTII+F H WMD+QGW+ S +C S YIFDSY QA L +PP ++ E+H+ F A W+ A G P SYGRT+ CD + N ++V AG + C Y+ AQ A + G +P + L +G+A+I +TE RL+ + +GR M P DY G+S + V + ALL+L LAS E LPWC G RA ++LP G+ + DC W GWGP+ G P ++ SW NMT G I+GY R S+L+G++T + A T+L++ VSAELA TDT GA + + T+VALLA Y R +L+ RA L RL A ALTA + ++ PP LVLV++ +AR +DGS S + WV GQA G G YR+VG VS+ A +D A L+W+N +A G
Sbjct: 33 EAWGDASYQTVCGDAISSGQLVNMCNLVGRGYPMQSAAGLLMAQRFRGFRIDDLAYSTEPNVPGVVADFTIDISRGTSLADVSKQIAGTGQV----------------------------DLFLCSDAACTVVV-----------------------------------------------DLAYIASAMTPAADATLAMGYSRFPYSLSGVSTGFLE-----TSAAGAVVDRNSTLAPEVGSVVRQVTWELADNAAVVDASPVLMELGGLARALSAPINTAWNGLRAGHYITSDGNCVTIISFVHPWMDEQGWDRSTNCESTQTYIFDSYLVQAYLHFPP--------EEVTIENHIDTWVYGDTDFVQFTFNGFFKRAATTQDGSKWNEYVAPPDLYTDVDPPIGYP-KTQSYGRTIHCDDYQYLNDESVGAGKNEC------YSEAQDRL-ADLKQGGVDPVADSGTFVVLTLGSASIVVLDITEPRLSAPTA------TTGRYTMNPIDYSNI-------------GTSYSRVNKSALRALLKL----------------VALASLKLPEDLPWCGGGRAYQATSTPY------VRLPGGSGDVLPALDCATWERFGWGPISSAGDQTPLTGQEVFGELLQASWGNMTKGANSSEEGVSIVGYERTTRMSMLAGVDTVVQIAETLLAERVSAELAVTDTTVALYGALVNVVFTVVALLATYASRKDLLRVLLRAALGQRPLRLVAHALTASICACVVMIPPVLVLVSEQAARNGNSDGSVSQMTWVSGQASGFGTYRVVGLVSLRFAAVYDSAAYALLWVNIVLAAAG 727
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A836CJG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG8_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.850e-80 Identity = 261/836 (31.22%), Postives = 370/836 (44.26%), Query Frame = 1
Query: 16 DAGGDTELCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQKPDA---AWPTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLA---HGPSHAAVTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMAQ---VAWTLDDPQWVEADPVLVS---------FGAMDLFNALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKSLYIFDSYFTQANLQWPPTIEPGPP------NKDPPEEHHVF----APARRGAGAGNWDTAAAGAPGVVA----------SYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAGRREPRPPA-------------ALVIGAAAISAWAVTEERLTPDSGGDSAGGDSGR-LRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCN--GDRASGTVLINSNAQFGELQLPNGTRT--------TIYDCDA-WGGLGWGPVGGGAL---PAVSGATLLARM-RVSWVNMTYD---FKGETH-GIMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRARLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALV 2310
D C + +QSGQ V C++V GY GSAADLL A+RF+ A AW +TD N +ADYT TL RLDA K I T + XXXXX D+FLC D C A+ADL+++ PS A TL GY R A T+ LP +++ D A+T + P A + + V+ AQ V W ++DP+WV P L++ G D ++A+R G Y + G CVT+++ H W D GW S DC Y+FDSYF QA L ++ G P + + H + AP R A W A+ VVA + GR + C ++F N + AG C A AY A PA R A P PP L IGAA AW +TE +AG D+ R L+ +D D + + A + + + L +L AV+A W +PLPWC+ + G A+ +++P ++YDC+A W LGWG V PAV+G + + R SW N+T D F T G GY +++ +G T SA +L D + E+++TD T AGAF+ LS T V+L+A Y+ R +L++FF R RL AAKA ++ F ++T P V++A+ ARA DG+++T+RWVEG A G G Y+++G +S+T AQ+ A V+VWLN + L+
Sbjct: 41 DTAATGAFCSDGIQSGQTVHACSLVDPGYVTGSAADLLMASRFKGFSAGKQAW-STDPNTVGLLADYTFTLQTTSQRLDASKDITATGQKRLPPXXXXXQL-----------------DLFLCGDDTCK-----------------------------------------------AMADLMYITAAGDAPSTPA-TLTFGYSRLANTLAALPTRYL-DPAALTSTLVPDAAAASPVSVPGAQLNTVVWQIEDPEWVANYPTLLNAASLARTLAIGGAD-WDAVRAGRYRDARGVCVTVLSPVHPWFDAMGWGASDDCAPTETYVFDSYFPQAYLD----LDSGAPYDVAYNSSSSSWDTHAYVYNLAPPAR---ATPWGWRASQLASVVARGELIDAGPGAMGRAVCCPLALFENKEVAAAGAHDCEAAHQAYCFADPA----RNAWADAPLPPLLQAPLLPQARHADVLRIGAATFVAWNLTERA--------AAGRDALRHLQFARFDVWEAD--IDYLQPDAADHADERLPYAVQMLTKL----------------AVMAK--WPDPLPWCDETNELGYGAAQGALKAERSYVRVPPAAAGGAAAAGVYSLYDCEAMWPLLGWGRVDTDLQRRRPAVTGTAIFNDVARPSWANVTDDTGLFAASTGTGFAGYPSLSTAAVEAGARTAALSAGVLLGDFAALEVSSTDFTVTLAGAFIALSLTAVSLIAGYIARADLLHFFMRCRLGVAAAKAFAILITTFALITYPITVIIAENGARAGNPDGTTATVRWVEGDAAGVGTYKVIGTISMTSEAQYSDAAYVIVWLNLALTLL 769
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A835ZC60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC60_9STRA) HSP 1 Score: 282 bits (721), Expect = 3.600e-79 Identity = 252/822 (30.66%), Postives = 366/822 (44.53%), Query Frame = 1
Query: 16 DAGGDTELCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQKPDA---AWPTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLA---HGPSHAAVTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMAQ---VAWTLDDPQWVEADPVLVSFGAMDL--------FNALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKSLYIFDSYFTQANLQWPPTIEPGPP----------NKDPPEEHHVFAPARRGAGAGNWDTAAAGAPGVVA--SYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAGRREPRPPAALV--IGAAAISAWAVTEERLTPDSGGDSAGGDS-GRLRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCNGDRASGTVLINSNAQFGEL-------QLPNGTRT---------TIYDCDA-WGGLGWGPVGGGAL---PAVSGATLLARM-RVSWVNMTYD---FKGETH-GIMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRARLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALV 2310
D C + +QSGQ V C++V GY GSAADLL A+RF+ A AW +TD N +ADYT+++ RLDA K I TA+ D+FLC D C A+ADL+++ PS A TLA GY R A T+ LP +++ D +T + P A + + V+ AQ VAW ++DP+WV P L++ ++ ++ +R G Y + G CVT+++ H W D GW S +C YIFDSYF QA L ++ G P + D + AP R G W +A +V + GR + C ++F N + AG C+ A+ A PA R P+ A+V +GAA AW +TE+ +AG D+ G L E ++ T R R ++ + G A+ L AV A W +PLPWC+ A L+ A G L ++P ++YDC A W LGWG V PAV+G + + R SW N+T + ++ T G GY S++ +G+ T SA +L D S EL++TD T AGAF+ LS T V+L+A Y+ R +L++FF R RL AAK ++ F ++T P V++A+ ARA DG+++T+RWVEG A G G Y+++G +S+T AQ+ A V+VWLN + LV
Sbjct: 40 DTAATGAFCSDGIQSGQTVHACSLVDAGYVTGSAADLLMASRFKGFSAGKQAW-STDPNTVGLLADYTMSVHATSQRLDASKDITATAQL----------------------------DLFLCGDDTCK-----------------------------------------------AMADLMYITAAGDAPSTPA-TLAFGYSRLANTLAALPTRYL-DPATITSTLVPDAAAASPVSVPGAQLSTVAWQIEDPEWVANYPTLLNTASLARALAIGGANWDVVRAGRYRDARGVCVTVLSPVHPWFDAMGWGASDECAPTETYIFDSYFPQAYLD----LDSGAPYDIVYNSSSSSWDGDAFVYDLAPPARATPWG-WRASAFAQQKLVGPGAMGRAVCCPLALFENKEVAAAGAHDCNAGHQAFCFADPA----RSDITDLPQALHAVVLGVGAATFVAWNLTEKA--------AAGRDARGHLHYERFNLGTASCERFDVREADIDIFEPDAAGHADERL--------PYALQMLTKLAVTAK--WQDPLPWCDDTNA----LVFGAAGLGPLYAERSYVRVPPAXXXXXXXAAGVYSLYDCAALWPLLGWGRVDTDLQRRKPAVTGTAIFTDIARPSWANVTENTGIYRTSTGTGFAGYPSLTTSAVQTGVRTAALSAGVLLGDFASLELSSTDFTVTLAGAFIALSLTAVSLIAGYIARADLLHFFMRCRLGVAAAKVFAILITTFALITYPITVIIAENGARAGNPDGTTATVRWVEGDAAGIGTYKVIGTISMTSKAQYVTAAYVIVWLNLALTLV 752
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A835YZN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN9_9STRA) HSP 1 Score: 280 bits (715), Expect = 1.940e-75 Identity = 246/780 (31.54%), Postives = 340/780 (43.59%), Query Frame = 1
Query: 16 DAGGDTE--LCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQK--PDAAWPT---TDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLAHGPSHAAVTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMAQVAWTLDDPQWVEADPVLVSFGAMDLF-----------NALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKS-LYIFDSYFTQANLQWPPTIEPGPPNKDPPEEHHV--FAPARRGAGAGNWDTAA--AGAPGVVASYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAGRREPRPPAALVIGAAAISAWAVTEERLTPDSGGDSAGGDSGRLRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTE-------PLPWCNGDRASGTVLINSNAQFGELQLPN-GTRTTIYDC-DAWGGLGWGPVGGGALPAVSGATLLARMRVSWVNMTY-------------DFKGETHGIMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRARLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYR 2220
D G T+ LC +A+ +GQ V +C + G L SAADLL A RF + P T T+ ++R F+ADYTL+ ++ R ++ K++KG+A+ D+FLCSD C VVA DL+ + ++ TLA GY R T++GLP + I+ A+T + A +A A V WT+DDPQWV+A PV++S+GA F LR+GNYET G+CVTIITF H WMD+QGW + CV + Y+FDSYF QANL WPP D V F A R A G A + V YGRTL CD +M+ N Q A T++C YAA G G P LVIG A+I AW ++E L+ ++ TT RG G +NV P + + A WT+ PLPWC+ + + + + +P+ G C DAWG LGWGP+ + +V L ++ SW N+ Y D G GY P ++ +G+ T SA +L AELAT+D T GA L L+ T VAL+A+Y GR ++V F R +P AAKA++A+VF F IV P A+ + + R A G +++RWVEG A G G+Y+
Sbjct: 1521 DTGKATQALLCQDAITTGQAVGMCAMAGDKLYLKSAADLLAAVRFVESAPPQIGDTATSTEPHMRGFLADYTLSQEQDTKRFNSSKRLKGSAQL----------------------------DLFLCSDPSCDVVA-----------------------------------------------DLVHIDTPDQDSSYTLAFGYTRIPGTLMGLPGKHIKATDALTSRSIADSGKIAGLADG-ATVIWTMDDPQWVDATPVMLSYGAAVRFIGMADAKNWNFERLRIGNYETRAGECVTIITFVHPWMDEQGWRRASACVGAARTYVFDSYFPQANLLWPPAQLANAAVSDSYANFEVANFNIAARAAALGQAPPGANTSNETDNVYMYGRTLQCDWTMYTNGQATPADTNNC------YAAGHNWGVQIEAEGIVTP-----LVIGNASILAWDISEAWLSQNA--------------------TTGHWTMGERGDWWNGGDHSNVPPE---YKTKQPTFAATDPNKNPLLKLGAYAQWTDATSAAAAPLPWCS----TAPEKFANAVHYANVHVPSLGGYVDWRRCNDAWGALGWGPIDFDPVTSVPARPLAEVLQPSWANVNYNHPRTQIKNFAAWDTATPGIGFAGYEYPIPGALTAGVETVKVSAAALLDQATQAELATSDFTSTTWGAVLGLALTTVALIASYAGRDDIVSLFARF-MPFCAAKAVSALVFAFGIVAPSAMAAYEENAVRGENARGDVTSVRWVEGAAMGYGQYK 2185
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A836CNV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV6_9STRA) HSP 1 Score: 268 bits (686), Expect = 7.970e-72 Identity = 227/658 (34.50%), Postives = 315/658 (47.87%), Query Frame = 1
Query: 586 TLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIA-ESDASVAPSMAQVAWTL--DDPQWVEADPVLVSFGAMDLF------------NALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSH----DCVSKSLYIFDSYFTQANLQWPPTIEPGPPNKDPPEEHHVFAPARRGAGAGNWDTAAAGAPGV-VASYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQP------AGGAPRRAGRREPRPPAALVIGAAAISAWAVTEERLTPDSGGDSAGGDSGRLRMEPYDYLTTDGGR---------NPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPL-PWCNGDRASGTVLINSNAQFGELQLPN----GTRTTIYDCDA-WGGLGWGPV--GGGALPAVSGATLLAR-----------------MRVSWVNMTYD------FKGETHG--IMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRA-RLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALVGCLWCSVAMFVRNR 2352
TLAMGY RFA +++ LP+ +R A +T V+ P A +S VA S +VAW L +WV+ + +++ FG F LR G Y G CV +++FKH WMD+ GW TS+ D + +YIFDSYF+QANLQ+PPT G N D + + F PA G GNW AG G V SYG L C + M+ N T+ A SC ADG +A +QP A P P LV+G AAISAW +TE RL D + GG + + Y G N G+A E + A L++ +VL S+ W L PWC D+ INS + +L+ G + DC W LGWG V GGG V+ T AR +R SW ++ D +K +T G MG S++ +G+ + SA VL+ L+ + T GA L+LSQTLVAL+A+Y R E+V FF R RLP L A+ LT F+ I TP L ++AD +A+ + +G + +RWV QA G G+Y +VGAV++T A D A++ VW+N +A +G +WCS ++ +R
Sbjct: 58 TLAMGYTRFAHSLVALPVFHVR-ADDLTAVLVPEATQSRLGVARS--KVAWALAAGTTEWVKDNIIMMPFGGAVRFLTLSARSVNLELGVLRAGAYLEQTGDCVVVVSFKHPWMDEMGWGTSNCDPGDPSTVKVYIFDSYFSQANLQFPPTK--GKANGDNNHDVYRFLPAAM-VGGGNW----AGPDGKNVRSYGAALACGSEMYTNRLTMGAMRFSCVTADGNWAKSQPLSAEDLANMEPELRSNDTRWMPQLLVLGGAAISAWEITEPRLALDEEAATVGGQPSYVMDGEHQYSNYKGSEMNPVLGTSGNGGGGKAAEDDGIYTSSAAGTLVKY----------------SVLTSEAWGNSLLPWCEIDQNR----INSLDRDKDLRQAKVAAAGKFHDLQDCKMLWPLLGWGNVHGGGGGANGVATETAAARVGSPAPSGKDALLAAGLLRPSWTDLEEDPDAKKPYKTDTWGKSFMGGGVLLTSALPAGVAAVVTSAEAVLAQFNDDMLSNMEMTLTTMGAALVLSQTLVALIASYAARREVVSFFLRVLRLPPLLARLLTVGAFLIGITTPAVLTIIADLAAQMSTPNGDDTQVRWVHAQANGLGQYNVVGAVTMTFQADTDATASIFVWINLALAGIGWMWCSWSVLRGSR 685
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A836CKV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV3_9STRA) HSP 1 Score: 260 bits (664), Expect = 3.660e-70 Identity = 259/856 (30.26%), Postives = 366/856 (42.76%), Query Frame = 1
Query: 4 KLPEDAGGDTE-LCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQKPDA---AWPTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLAHGPSHAAV-TLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAP----SMAQVAWTLD-DPQWVEADPVLVSFGAM---------DLFNALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKSLYIFDSYFTQANLQWPPTIEPGPPNKDPPEEH---------HVFAPARRGAGAGNWDTAAAGAPGVVAS---YGRTLFCDASMFRNVQTVTAGTSSC-SIADGAYAAAQPAGGAPRRAGRREPRPPAALVIGAAAISAWAVTEERLTPDSGGDSAGGDSGRLRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCNGDRA-----------SGTVLINSNAQFGEL-------------QLPNGTRTTIYDCDAWGGLGWGPVGGGALP-AVSGATLLA---------------RMRVSWVNMTYDFKGETHG--IMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRA----RLPRLAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALVGCLWCSVAM 2337
+L E G T+ +CG+A+ SGQ V++CN+VG+GYPL SAA L A RF DA A+ +T+ NV+ +AD+T+ ++R S D K+I G + D+FLC+D C+VV DL ++ + AA TLAMGY RF T+ G+ F+ T + + D++++P ++ QV W L V+A P+L+ FG + + LR G Y T+ G CVTII+F H WMD QGWN S++C YIF+SY QA LQ+P T+ D H F A NW+ V + YGRTL+CD F N ++V AG + C S++ + R P L +G A I A +TE RL SG D++ +G M+P DY G + R A++ ALL L A LAS E LPWC G RA G +S A+ G + P+ R+++ C G V P A AT +A + SW NM G I+G+ R G S+L+G++T + A T+L++ VSAELA TD GA + + T+VALLA Y R +L+ RA R RLAA ALTA + ++ PP L+L ++ + R DGS S + WV GQA G G+Y +V VS+ A +D A L+W N +A+ G V+M
Sbjct: 213 QLKESWGAATQTVCGDAISSGQLVNMCNLVGRGYPLQSAAGTLMAQRFLDYDADGFAF-STEPNVQGVVADFTIQISRGTSLADVNKRIAGAGQV----------------------------DLFLCADTACSVVV-----------------------------------------------DLAYVRAAAAPAATATLAMGYSRFLNTLAGVSTGFLE-----TSAVGAVVPHDSALSPEVGSTVGQVTWELAATANMVDASPILMEFGGLARALSAPNNTAWKGLRAGIYITADGDCVTIISFVHSWMDAQGWNRSNNCEPSYTYIFNSYLVQAYLQFP-TLNVSSATHDRVYGHLGGVDVTYNGTFQTASSSKYGSNWEVDTFPDISVTPNMEEYGRTLYCDWYQFYNKESVGAGKNECYSVSHNTHIGNLE----DSRTDGDLPGKYVVLTLGGANIVALNITEPRL---SGSDAS---TGHYTMDPEDYSNIGPGTSYVRPDAMQ-----------ALLAL----------------AALASMNLPEELPWCGGGRAYAATSTPYVQVPGKYCPHSTARRGSALDGGPSRRSVGCRRFPD-QRSSVRSC--------GSVTASDRPVAPRFATRIAVSHQCAPRSCSLFPPPAQASWGNMAVSTVSYVEGVSIVGHDRTTGLSMLAGVDTVVQIAETLLAERVSAELAVTDMTVALYGALVNVVFTVVALLATYASRKDLLRLLLRAAFRHRPLRLAAHALTASICACAVMIPPVLLLASEQAVRDGNPDGSVSQMTWVSGQASGFGDYWVVALVSLRFAAVYDSAAYALLWFNIALAVAGTAAMLVSM 940
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Match: A0A835ZBK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBK7_9STRA) HSP 1 Score: 236 bits (603), Expect = 2.930e-63 Identity = 239/831 (28.76%), Postives = 344/831 (41.40%), Query Frame = 1
Query: 1 MKLPEDAGGDTELCGEALQSGQQVSLCNIVGKGYP-LGSAADLLFAARFQ--KPDAAWPTTDRNVRAFMADYTLTLTREQSRLDAYKQIKGTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMFLCSDLECTVVAGLLXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLDXXXXXXXXXXAVADLIFLAHGPSHAAVTLAMGYVRFATTVLGLPMQFIRDAYAMTPVIAPIAESDASVAPSMAQVAWTL-DDPQWVEADPVLVSFGAM---------DLFNALRMGNYETSGGKCVTIITFKHDWMDQQGWNTSHDCVSKSLYIFDSYFTQANLQWPPTIEPGPPNKDPPEEHHVFAPARRGAGAGNWDTAAAGAPGVVASYGRTLFCDASMFRNVQTVTAGTSSCSIADGAYAAAQPAGGAPRRAG--RREPRPPAALVIGAAAISAWAVTEERLT-PDSGGDSAGGDSGRLRMEPYDYLTTDGGRNPARGRAVEGSSVNNVGPAEALLRLXXXXXXXXXXXXXXXXAVLASKTWTEPLPWCNGDRASGTVLINSNAQFGELQLPNGTRTTIYDCDAWGGLGWGPVG-------------GGALPAVSGATLLAR-MRVSWVNMTYDFKGETHG--IMGYARPFGSSILSGINTTMASARTVLSDVVSAELATTDTNYTRAGAFLLLSQTLVALLAAYLGRHELVYFFRRARLPR----LAAKALTAVVFVFTIVTPPALVLVADGSARATGADGSSSTIRWVEGQAYGSGEYRIVGAVSVTLNAQHDQVANVLVWLNFTIALVGCLWCSVAMF----VRNRPRQLDVD 2373
M+ E CG+A+ SGQQ ++CN+VG +P + SAA LL A RF+ +PD +T+ NV +AD+T+ ++R S D K+I GT + C E V PS + G++ + + P+ T ++P+A S +V QV W + DD V+A P+L+ FGA+ ++ LR GNY T+ G CVTI+TF H WMD QGWN S DC+S YIF+SY QA LQ+PP + P+ + E + F AR +G + + + + GR L C S+ Q C+ D + P G + L + A+I A +TE RL+ PD+ + + + DG + R A A +LL L A LAS E LPWC G A + + + + +G DC W LGWG + PA+SG +L M+ SW NMT G I+ Y R G S+ +G+ T + A T+L+ V+AELA TDT GA + + T+VALLA Y GR +L+ RA R LAA A+TA++ ++ PP L+L ++ +ARA ADG S + WV QA G G+Y IVG VS+ A +D VA L+W N +A G +M V RPR L+++
Sbjct: 32 MRWDESLADSQLACGDAMISGQQANMCNLVGSTFPPMRSAAGLLMAGRFRGFQPDGFAYSTEPNVPGIVADFTMDISRATSLADVNKEIAGTGQVTSGCTRP-------------------------CLSYEKAVQQ-----------------------------------------------------FEPSRVST----GFLSTSAAGIATPL---------TSALSPLARSTVTVQ----QVTWEMADDATVVDASPILMEFGALARSLTALGNSSWSGLRAGNYITADGACVTIVTFVHPWMDAQGWNQSADCISTRTYIFNSYLVQAYLQFPPVVLAKHPDSNSGE--YTFK-ARDQSGQQIFSSWGGWSDPSMCQIGRRLTCGDSVVNKEQAFE-----CTTVDQCW---------PDDIGDLTKADLGNVVLTLRRASIVALDITEMRLSGPDA--------------DHHGHYYMDGEESQVRPLA-----------ATSLLVL----------------ASLASSGAAEDLPWCGGGGAHPYGI--TAVPYVQAPDDSGAVLPANDCATWERLGWGKISEPLSPARTAAVTVAARPPALSGPAMLGTFMQASWGNMTRSDTITKAGTSIVSYGRATGPSLQAGVETVVQMAETLLAQRVAAELAVTDTTTALYGALVNVVFTIVALLATYTGRKDLLRVLSRAAFGRRVGVLAAHAVTALICASAVLLPPVLLLASEQAARAGNADGGVSQMTWVSAQASGFGDYSIVGLVSLRFVAVYDPVAYGLLWFNIALATAGTAVMLASMLRHASVTARPRPLEIE 707 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347202 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3547 ID=mRNA_3547|Name=jgi.p|Trimin1|347202|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2523bp|location=Sequence derived from alignment at Contig_9:467307..478964- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAAGCTGCCGGAAGATGCCGGTGGCGACACGGAGCTCTGTGGGGAGGCback to top protein sequence of jgi.p|Trimin1|347202 >Trimin1|347202|estExt_Genemark1.C_Ctg_90052 ID=Trimin1|347202|estExt_Genemark1.C_Ctg_90052|Name=jgi.p|Trimin1|347202|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=841bp MKLPEDAGGDTELCGEALQSGQQVSLCNIVGKGYPLGSAADLLFAARFQKback to top mRNA from alignment at Contig_9:467307..478964- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3547 ID=mRNA_3547|Name=jgi.p|Trimin1|347202|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11658bp|location=Sequence derived from alignment at Contig_9:467307..478964- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_9:467307..478964- >mRNA_3547 ID=mRNA_3547|Name=jgi.p|Trimin1|347202|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2523bp|location=Sequence derived from alignment at Contig_9:467307..478964- (Tribonema minus UTEX_B_3156 )back to top |