mRNA_3524 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347188
Unique NamemRNA_3524
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: A0A835YR02_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR02_9STRA)

HSP 1 Score: 1266 bits (3276), Expect = 0.000e+0
Identity = 689/689 (100.00%), Postives = 689/689 (100.00%), Query Frame = 3
Query:   84 MAATADLEQANQLTLRAGQDGEDLTMRRPLTANVLGGLQESVDDDTSSIRSRTDNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREISETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPRLQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 2150
            MAATADLEQANQLTLRAGQDGEDLTMRRPLTANVLGGLQESVDDDTSSIRSRTDNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREISETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPRLQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY
Sbjct:    1 MAATADLEQANQLTLRAGQDGEDLTMRRPLTANVLGGLQESVDDDTSSIRSRTDNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREISETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPRLQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 689          
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: A0A836CJS3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS3_9STRA)

HSP 1 Score: 945 bits (2443), Expect = 0.000e+0
Identity = 492/691 (71.20%), Postives = 559/691 (80.90%), Query Frame = 3
Query:   84 MAATADLEQANQLTLRAGQDGEDLTMRRPLTANVLGGLQESVDDDTSSIRSRTDNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREISETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVEN--DLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPRLQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 2150
            MAATA  E ANQ T+RAG+D +D   R P+   +L G  E+  DDTSSI+SRTDNPAI+TFKDL VTAK R QVLLKG+SGQ++GGFWACMGPSGSGKSTLLNTLALRLD AVSV GDLRLNGR+YDNA+LKRMSGYVMQDDL NGNLTCEETL YTARLRCPQD   A RKVRVD VL+Q+GLEHARHT VGTPLRKGISGGERKRL+V  ELLVEP+LLFLDEPT+GLDSVTAL LC+ LR+IS+TCTV+CTIHQPQSKI++LFDNLILLK+GDIAYQGPA+E+LAFFE+TG+PCP                                PLTNPADHLLDSIS+TR+DSSHSL D+D+ +  DLH+RFTRP                  HFDL HG DKP L  R TTSWW QFTVLLERS K+QSRK  M++TQ+ QV +MA+LIGFAFY IGTDQ SV LRKPVLFFCVINQGLFSAL+ INSFPGERMLSLRERAAGTYYTSAYFMAK+LAET +QI+LPI+F+C+VY+++GLQ  ASKFFIFM FM+LCSL ATSLALLVSAF RTTDLSVTVLPFMLE  RLFGAF++ P+NTP YF WL+A+SYV Y Y+GVS+NEN  LTLTCT  E I+V G+TQCP+PNG+  LE  G+   +MGACAGIL+FYI F RFLAYLGVRFLK+
Sbjct:    1 MAATAQ-ELANQGTMRAGEDVQDNERRLPMQ-RLLDGTAEAEADDTSSIQSRTDNPAIVTFKDLTVTAKTRKQVLLKGLSGQIKGGFWACMGPSGSGKSTLLNTLALRLDPAVSVVGDLRLNGRAYDNAQLKRMSGYVMQDDLFNGNLTCEETLTYTARLRCPQDANAAQRKVRVDGVLRQVGLEHARHTPVGTPLRKGISGGERKRLAVAQELLVEPQLLFLDEPTTGLDSVTALSLCHTLRKISDTCTVICTIHQPQSKIFALFDNLILLKSGDIAYQGPAKESLAFFEKTGFPCP--------------------------------PLTNPADHLLDSISLTRSDSSHSLTDMDLASAADLHVRFTRP------------------HFDLLHGADKPHLPLRRTTSWWLQFTVLLERSFKEQSRKTDMIVTQLVQVLVMALLIGFAFYQIGTDQHSVVLRKPVLFFCVINQGLFSALAVINSFPGERMLSLRERAAGTYYTSAYFMAKMLAETALQIVLPIIFSCLVYWIVGLQPVASKFFIFMGFMILCSLGATSLALLVSAFARTTDLSVTVLPFMLETFRLFGAFYMPPSNTPNYFEWLNAISYVTYSYIGVSINENTDLTLTCTESELIEVNGVTQCPVPNGNVVLEKDGLNRLSMGACAGILIFYIVFVRFLAYLGVRFLKW 639          
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: A0A835ZBW7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW7_9STRA)

HSP 1 Score: 850 bits (2197), Expect = 2.950e-299
Identity = 441/649 (67.95%), Postives = 513/649 (79.04%), Query Frame = 3
Query:  210 DDDTSSIRSRTDNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREISETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDV--ENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPRLQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 2150
            D+DTSSI+SRT+NPA++TFK+L V AKAR Q+LLKGISGQ+RGGFWACMGPSGSGKSTLLNTLALRLD  V V+GDLRLNGR   NA+LKRMSGYVMQDDL NGNLTCEE L YTARLRCPQD + A RK RVD VL+Q+GLEHARHT VGTPL+KGISGGERKRL+V  ELLVEP+LLFLDEPT+GLDSVTAL LC+ LR+IS+ C+V+CTIHQPQSKI++LFDNLILLKAGDIAYQGPA++AL FFE TG+PCP                                PLTNPADHLLD +S+TR++SSHSL D+D+  E +LHLRFTRP                    DL HG D+P+L  R+TTSW  QF+VLL+ S K+Q+RK  M+  Q+ Q+ IMAILIGFAF+ IGTDQ SV LRKPVLFFCVINQGLFSAL+ INSFPG+RML+LRERAAGTY TS YF AK+LAET +Q+ILPI+F+CIVY+ +GLQ  ASKFFIF  FM+LCSL+ATSLALL+SAF RTTDLSVT+LP MLE  RLFGAF++ PA+TP YFVWL+ +SYV Y Y GVS+NEN GL LTCT +E  DV G  QCPIP+GD  LE+ G+   ++G CAGILVFYI F RFLAYLGVRFLK+
Sbjct:   63 DEDTSSIQSRTENPAVVTFKNLEVVAKARKQLLLKGISGQIRGGFWACMGPSGSGKSTLLNTLALRLDPGVKVTGDLRLNGRPCSNAQLKRMSGYVMQDDLFNGNLTCEEQLTYTARLRCPQDTSAAQRKARVDGVLRQVGLEHARHTSVGTPLKKGISGGERKRLAVAQELLVEPQLLFLDEPTTGLDSVTALSLCHTLRKISDACSVICTIHQPQSKIFALFDNLILLKAGDIAYQGPAKQALPFFESTGHPCP--------------------------------PLTNPADHLLDVVSLTRSESSHSLADVDLAAERELHLRFTRP------------------EIDLLHGADRPQLPLRQTTSWLRQFSVLLDSSFKEQTRKTGMIAAQLIQMLIMAILIGFAFFQIGTDQMSVQLRKPVLFFCVINQGLFSALAVINSFPGKRMLALRERAAGTYKTSTYFTAKMLAETALQVILPIIFSCIVYWTVGLQPVASKFFIFTGFMILCSLSATSLALLISAFARTTDLSVTMLPSMLETFRLFGAFYMPPASTPAYFVWLNDISYVTYSYTGVSINENRGLKLTCTSDELEDVNGQLQCPIPDGDVILEADGLNKLSIGECAGILVFYIVFVRFLAYLGVRFLKW 661          
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: A0A8J4CN86_9CHLO (ABC transporter domain-containing protein n=8 Tax=Volvox TaxID=3066 RepID=A0A8J4CN86_9CHLO)

HSP 1 Score: 658 bits (1697), Expect = 1.760e-224
Identity = 360/640 (56.25%), Postives = 439/640 (68.59%), Query Frame = 3
Query:  243 DNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREI--SETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPR--LQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 2150
            ++P  L +KDL VTA+   + LL G++G++  GF+A MGPSGSGKSTLLNTL+ RLDR V+V+G+L+LNG+ Y NAELK +SGYVMQDDLLN +LT EETL YTA LR P+  T   R  RV+ V+QQ+GL H R  IVG+P++KGISGGERKRL V +ELL  PKLLFLDEPTSGLDSVTAL LC +LR +  S TCTVVCTIHQPQ+KI++LFD L+LL  G+I YQGPA+ AL FF ++G+PCP                                   NPADH LD I+    DS  S ++ +     H  +T P                     + H +D PR  +  R+TT W  QF VLL RSLK+  RKR      + Q  IMAILIG  F  IGT Q SVT R+PVLFF VINQG+F AL  INSFP ERMLSLRERAAGTY+ SAYF+AK+ AETV Q+  PILF+C+VYFL+G Q  ASKFFIFMAFMVLCSL+ATSLAL VSA  RTTD++VTVLP  LE+CRLFG FFLSPAN P YF WL+ALSYV+Y YVG+SLNE HGL L CTP +     G  QCP  +G+  +++ G++  ++G CAG+L+ YI F R +AYLGVR++KY
Sbjct:   28 ESPVFLAWKDLTVTARRHMRPLLNGVTGKITAGFYAIMGPSGSGKSTLLNTLSCRLDRGVTVAGELKLNGQLYSNAELKLLSGYVMQDDLLNAHLTVEETLRYTAELRMPRGSTPEERMARVEEVMQQVGLTHVRSVIVGSPIKKGISGGERKRLCVAMELLTRPKLLFLDEPTSGLDSVTALSLCRLLRRLATSRTCTVVCTIHQPQAKIFNLFDQLLLLNRGNIVYQGPAQGALEFFGRSGFPCPA--------------------------------FENPADHFLDVITPNMNDSVESFVEKEAALKRH--YTAPA--------------------VDHLLDNPRPLILPRDTTPWHKQFRVLLRRSLKETWRKRNATYVLLAQTVIMAILIGTVFLRIGTSQTSVTRRQPVLFFTVINQGMFGALIVINSFPSERMLSLRERAAGTYHVSAYFLAKITAETVSQLPAPILFSCVVYFLVGFQAVASKFFIFMAFMVLCSLSATSLALAVSAIARTTDMAVTVLPMALEVCRLFGGFFLSPANIPNYFKWLNALSYVQYTYVGISLNELHGLKLYCTPSQLNAKTG--QCPTTSGEQTIKALGLDYISIGGCAGVLIGYILFCRVVAYLGVRYIKY 611          
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: A0A835WTF6_9CHLO (ABC transporter domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WTF6_9CHLO)

HSP 1 Score: 654 bits (1686), Expect = 1.260e-222
Identity = 357/635 (56.22%), Postives = 435/635 (68.50%), Query Frame = 3
Query:  258 LTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREI--SETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPR--LQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 2150
            L +K+L VT++   + LL  ++G +  GF+A MGPSGSGKSTLLNTL+ RLDR V+V G+L+LNG+ Y NAELK++SGYVMQDDLLN +LT EETL YTA LR P+  T   R+ RV+ V+  +GL H R  IVG+P++KGISGGERKRL V +ELL +PKLLFLDEPTSGLDSVTAL LC +LR +  S TCTVV TIHQPQ+KI++LFD L+LL  G I YQGPA++AL FF+++G+PCP                                   NPADH LD I+    DS  SL+    E  L   +  P                     + H +D PR  +  R+ T W  QF VLL RS+K+  RKR   +  + Q  IMA+LIG  F  IGTDQKS   R+PVLFFCVINQG+F AL  INSFP ERML+LRERAAGTY+ SAYF+AK+ AET+ Q+  PILF+C+VY+L+GLQ  A+KFFIFM FM+LCS AATSLAL VSA  RTTD+SVT+LP  LEICRLFG FFLSPAN P YFVWLDALSYVKY YVG+SLNE  GLTLTCTP +   +    +CPI +G   ++S G++   MG CAGILV YIF  RF+AYLGVRFLK+
Sbjct:   47 LAWKNLTVTSRKVKRPLLNNVTGAITDGFYAIMGPSGSGKSTLLNTLSCRLDRGVTVEGELKLNGQEYSNAELKKLSGYVMQDDLLNAHLTVEETLRYTAELRMPRTTTPEERQERVETVMNSVGLSHVRDVIVGSPMKKGISGGERKRLCVAMELLTKPKLLFLDEPTSGLDSVTALSLCRLLRRLAMSRTCTVVTTIHQPQAKIFNLFDQLLLLNRGSIVYQGPAQDALDFFDRSGFPCPMHE--------------------------------NPADHFLDVITPNHNDSVESLV--AKEEGLKKHYQPP--------------------PVDHLLDNPRPLVLPRDATPWHKQFRVLLRRSMKEVWRKRSTTLVLLAQTIIMAVLIGTVFLQIGTDQKSTVRRQPVLFFCVINQGMFGALIVINSFPSERMLALRERAAGTYHVSAYFLAKITAETLSQLPAPILFSCVVYWLVGLQAVAAKFFIFMGFMILCSTAATSLALAVSALARTTDMSVTILPMALEICRLFGGFFLSPANLPKYFVWLDALSYVKYTYVGISLNELGGLTLTCTPPQ---LNAAGKCPITSGQQTIDSLGLDYLNMGQCAGILVAYIFICRFVAYLGVRFLKH 624          
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: D8TMA3_VOLCA (ABC transporter domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TMA3_VOLCA)

HSP 1 Score: 652 bits (1682), Expect = 3.440e-222
Identity = 359/673 (53.34%), Postives = 449/673 (66.72%), Query Frame = 3
Query:  138 QDGEDLTMRRPLTANVLGGLQESVDDDTSSIRSRTDNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREI--SETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPRLQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 2150
            Q G D+   + +++   G +     D+T       + P  L +K+L VTA+ + + LL  ++G++  GF+A MGPSGSGKSTLLN L+ RLDR VS+SG+L+LNG+ Y + ELK MSGYVMQDDLLN +LT EETL YTA LR P+  T   R  RV+ V+QQ+GL H R  +VG+PL+KGISGGERKRL V +ELL +PKLLFLDEPTSGLDSVTAL LC +LR +  S TCTVVCTIHQPQ+KI++LFD L+LL  G I YQGPA+ AL FF+++G+PCP                                   NPADH LD I+ +  DS  SL+  + E  L   +T P                    D   G  KP +  R+TT W  QF VLL RSLK+  RKR      + Q  +MA+LIG  F  IGT Q S T R+PVLFF VINQG+F AL  INSFP ER+LSLRERAAGTY+ SAYF+AK+ AET+ Q+  PILF+CIVYFL+G Q  ASKFFIFMAFMVLCSL+ATSLAL VSA  RTTD++VTVLP  LE+CRLFG FFLSPAN P YF WL+ALSYV+Y YVG+SLNE HGL L C P +   +    +CP+ +G+  +++ G++  ++G CAG+L+ YI F R +AYLGVRF+KY
Sbjct:    3 QQGFDVADAQAISSGAAGVIVHVNPDET-------ELPIFLAWKELTVTARRQKRPLLNQVTGKITSGFYAIMGPSGSGKSTLLNALSCRLDRGVSMSGELKLNGQPYGSTELKLMSGYVMQDDLLNAHLTVEETLRYTAELRMPRTTTPEERMARVEEVMQQVGLSHVRSVVVGSPLKKGISGGERKRLCVAMELLTKPKLLFLDEPTSGLDSVTALSLCKLLRRLAASRTCTVVCTIHQPQAKIFNLFDQLLLLNRGTIVYQGPAQGALDFFDRSGFPCPAYE--------------------------------NPADHFLDVITPSMNDSVESLV--EKEEKLKRHYTPPA------------------VDHLLGSPKPLILPRDTTPWSKQFQVLLRRSLKETWRKRSATYVLLAQTVVMAVLIGTVFLRIGTSQTSTTRRQPVLFFTVINQGMFGALIVINSFPSERLLSLRERAAGTYHVSAYFLAKITAETISQLPAPILFSCIVYFLVGFQLVASKFFIFMAFMVLCSLSATSLALAVSAIARTTDMAVTVLPMALEVCRLFGGFFLSPANIPLYFKWLNALSYVQYTYVGISLNELHGLKLYCAPNQ---INSSGKCPVTSGEQTIKALGLDYISIGGCAGVLIGYIIFCRVVAYLGVRFIKY 613          
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: A0A150GN10_GONPE (ABC transporter domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GN10_GONPE)

HSP 1 Score: 645 bits (1665), Expect = 2.330e-219
Identity = 360/644 (55.90%), Postives = 435/644 (67.55%), Query Frame = 3
Query:  243 DNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREI--SETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVD--KPRLQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFM----LEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 2150
            D P  L +KDL VTA+   + LL G++G++ GGF+A MGPSGSGKSTLLNTLA RLD  VS+SG+L+LNG  Y NAELK+MSGYVMQDDLLN +LT  ETL YTA LR P+  T   R  RV  V+ Q+GL H R  IVG+P++KGISGGERKRL V +ELL +P LLFLDEPTSGLDSVTAL LC +LR +  S+TCTVVCTIHQPQ+KI++LFD L+LL  G+I YQGPA+ AL FF+++G+PCP                                   NPADH LD I+    DS  SL+  + E  L   +T P                     + H ++  KP +  R+ T W  QF VLL RSLK+  RKR      + Q  I+A+LIG  F  IGTDQKS   R+PVLFF VINQG+F AL  INSFP ERMLSLRERAAGTY+ SAYF+AKV AET+ Q+  PILF+C+VYFL+GLQ  ASKFFI+MA MVLCS AATSLAL VSA  RTTD++VT+LP      LEICRLFG FFLSPAN P YF WLDALSYVKY YVG+SLNE HGL L CTP +    G   +CPI +G+  ++S G++  ++G C GIL+ YI   R +AYLGVR+LK+
Sbjct:   45 DAPVNLAWKDLTVTARRAKRPLLNGVTGKIVGGFYAIMGPSGSGKSTLLNTLACRLDHGVSISGELKLNGNEYSNAELKKMSGYVMQDDLLNAHLTVHETLSYTAELRMPRTSTPEERAQRVQEVMGQVGLSHVRDVIVGSPMKKGISGGERKRLCVAMELLTKPALLFLDEPTSGLDSVTALSLCRLLRRLASSKTCTVVCTIHQPQAKIFALFDQLLLLNRGNIVYQGPAQGALDFFDRSGFPCPAYE--------------------------------NPADHFLDVITPNMNDSVESLV--EKEKQLSRFYTPPT--------------------VEHLLENPKPLVLPRDVTPWHVQFRVLLRRSLKETWRKRSTTYVLMLQTVIIAVLIGTVFLRIGTDQKSTVRRQPVLFFTVINQGMFGALIVINSFPSERMLSLRERAAGTYHCSAYFLAKVTAETISQLPAPILFSCVVYFLVGLQPVASKFFIYMALMVLCSTAATSLALAVSAIARTTDMAVTILPMASPGALEICRLFGGFFLSPANLPKYFSWLDALSYVKYTYVGISLNELHGLELHCTPSQLNSAG---KCPITSGEQTIKSLGLDYISIGDCVGILIAYIVICRLIAYLGVRYLKH 631          
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: A0A2J7ZUP2_9CHLO (ATP-binding cassette sub-family G member 2 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZUP2_9CHLO)

HSP 1 Score: 637 bits (1644), Expect = 2.230e-216
Identity = 348/632 (55.06%), Postives = 430/632 (68.04%), Query Frame = 3
Query:  258 LTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREIS--ETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPRLQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLK 2147
            + +KDL VTA    + LL  ++G++  G++A MGPSGSGKSTLLNTLALRLDR +SVSG+L+LNG+ Y NAELK++SGYVMQDDLLN +LT EETL YTA LR P+  T   R+ RV  V++Q+GL H    IVG+PLRKGISGGERKRL V +ELL +P LLFLDEPTSGLDSVTAL LC +L+ ++   TCTVVCTIHQPQ+KI++LFD+L+LL  G I YQGPA +AL FF+++G+PCP                                   NPADH +D I+    DS  SL++ + +   H +   P+                       G  KP +  R++T W  QF VLL RS+K+  RKR      + Q  +MA+LIG  F  IGTDQKS   R PVLFF VINQG+F AL  INSFP ERMLSLRERAAGTY+ SAY++AK +AETV Q+  PI+F+CIVYFL+G Q +ASKFFI+M FMVLCS AATSLAL VSA  RTTD++VT+LP  LEICRLFG FFLSPAN P YF WLDALSYVKY Y+G+SLNE  GL L CTP +   +    +CPI +G+  ++S G++  +M  CAGIL+ YI   R +AYLGVRFLK
Sbjct:   42 VAWKDLTVTATRIKRPLLNSVTGKITTGYYAIMGPSGSGKSTLLNTLALRLDRNMSVSGELKLNGQDYSNAELKKISGYVMQDDLLNAHLTVEETLGYTAELRMPRTTTVEERRARVKEVMEQVGLTHVSAVIVGSPLRKGISGGERKRLCVAMELLTKPLLLFLDEPTSGLDSVTALSLCKLLKRLATGRTCTVVCTIHQPQAKIFNLFDHLLLLNRGTIMYQGPAPQALGFFDRSGFPCPLHE--------------------------------NPADHFMDVITPNMNDSVESLVEKEAKLKEHYQ-APPVEHLL-------------------GTPKPLVLPRDSTPWHKQFRVLLRRSIKETWRKRDTTYVLLIQTALMAVLIGTVFLRIGTDQKSAVRRNPVLFFTVINQGMFGALIVINSFPSERMLSLRERAAGTYHVSAYYLAKSVAETVSQLPAPIIFSCIVYFLVGFQPDASKFFIYMGFMVLCSTAATSLALAVSAIARTTDMAVTILPMALEICRLFGGFFLSPANLPNYFKWLDALSYVKYSYIGISLNELTGLKLHCTPAQ---LNAAGKCPITSGEQTIKSLGLDYISMNDCAGILISYIIICRIIAYLGVRFLK 618          
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: A0A836C0Y5_9CHLO (ABC transporter domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C0Y5_9CHLO)

HSP 1 Score: 629 bits (1622), Expect = 6.010e-213
Identity = 356/687 (51.82%), Postives = 446/687 (64.92%), Query Frame = 3
Query:  111 ANQLTLRAGQD---GEDLTMRRPLTANVLGGLQESVDDDTSSIRSRTDNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREISET--CTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFD--LHHGVDKPRLQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 2150
            A Q+T+   +D     D  + R   A+    L+  + DD  +       P  L +KDL V AKA ++ LL  ++G++  GF+A MGPSGSGK+TLLNTLA RLDR V+VSGDLRLNG  Y NAELKRM+GYVMQDDLLN +LT EETL YTA LR P+  +   R  R++  + Q+G+ H R  IVG+P++KGISGGERKRL V +ELL +P LLFLDEPTSGLDSVTAL LC +LR ++    CTVVCTIHQPQ+KI++LFDNL+LL  G I YQGPA  AL FF+++G+PCP                                   NPADH+LD I+ T T+S   L     E  +   +  P                  H D  LH+   +P    R++  W  QF  LL RSLK+  R+R   +  + Q  +MA+LIG  F  IG  Q S   R+PVLFF VINQG+F +L  INSFP ERMLSLRERAAGTY+ SAYF+AK+ AET+ Q+  PI+F+CIVY+L+G Q  ASKFFIF+AFM+LCS AATSLAL VSA  RTTD++VT+LP  LEI RLFG FFLSP N P YFVWLDALSYVKY YVG+SLNE +GL LTCTP++E   G    C +P+G   +++ G++  T+G C GIL+ YI   R +AYLGVRFLK+
Sbjct:    5 AQQVTVDIQRDEVPAPDSPIGRNSDASGRADLELELHDDHEA-------PVTLAWKDLTVQAKAMSRPLLNSVTGKITSGFYAIMGPSGSGKTTLLNTLAFRLDRGVAVSGDLRLNGMEYTNAELKRMAGYVMQDDLLNAHLTVEETLRYTAELRMPRTTSPRERLERIEGAMSQVGISHVRDVIVGSPMQKGISGGERKRLCVAMELLTKPALLFLDEPTSGLDSVTALSLCRLLRRLASARACTVVCTIHQPQAKIFNLFDNLLLLNRGSIVYQGPAGGALDFFDRSGFPCPQHE--------------------------------NPADHILDVITPTMTESMEDLA--RKEKAITSLYEPP------------------HVDHLLHN--PRPLALPRDSMPWHKQFQTLLRRSLKETWRRRSTTLVLMAQTAVMAVLIGTVFLQIGDGQSSAVRRQPVLFFTVINQGMFGSLVVINSFPSERMLSLRERAAGTYHVSAYFLAKITAETLSQLPAPIIFSCIVYWLVGFQAVASKFFIFLAFMLLCSTAATSLALAVSAIARTTDMAVTILPMALEISRLFGGFFLSPRNLPNYFVWLDALSYVKYTYVGISLNELNGLELTCTPQQERPDGS---CAVPDGQTTIDALGLDYITIGDCVGILIGYIVICRIIAYLGVRFLKH 627          
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Match: A0A2K3DJM4_CHLRE (ABC transporter domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DJM4_CHLRE)

HSP 1 Score: 629 bits (1621), Expect = 9.100e-213
Identity = 346/639 (54.15%), Postives = 430/639 (67.29%), Query Frame = 3
Query:  246 NPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREIS--ETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLMDLDVENDLHLRFTRPLSCXXXXXXXXXXXXXXXHFDLHHGVDKPR--LQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFYDIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGTYYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMVLCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGYFVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDAFLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY 2150
            +P  L +K L VT++   + LL  ++G +  GF+A MGPSGSGKSTLLN LA RLD  V + G+L+LNG++Y +AELK++SGYVMQDDLLN +LT EETL YTA LR P+  T   R+ RV  V++Q+GL H R+ IVG+P++KGISGGERKRL V +ELL  PKLLFLDEPTSGLDSVTAL LC +LR ++   TCTVV TIHQPQ+KI+ LFD L+LL  G I YQGPA++AL FF+++G+PCP                                   NPA+H LD I+    DS  SL     E  L   +  P                     + H +D PR  +  R++T W  QF VLL RSLK+  RKR   +  +    IMA+L+G  F  IGTDQKS   R+PVLFFCV+NQG+F AL  INSFP ERMLSLRERAAGTY+ SAYF+AK+ AE + Q+  PILF+CIVYFL+GLQ  A+KFFIFM FM+LCS+AATSLAL VSA  RTTD++VT+LP +LE+CRLFG F+LSP N P YF WLDAL+YVKY YVG+SLNE  GL LTCTP + +D  G  +CPI +G   +++ G++  TMG CAGILV YI      AYLGVRFLK+
Sbjct:   48 HPVDLAWKGLTVTSRKTQRALLSNVAGAITDGFYAIMGPSGSGKSTLLNALACRLDHGVKLEGELKLNGQNYSHAELKKVSGYVMQDDLLNAHLTVEETLRYTAELRLPRTTTPEERQERVQTVMEQVGLAHVRNVIVGSPMKKGISGGERKRLCVAMELLTRPKLLFLDEPTSGLDSVTALSLCRLLRRLAMTRTCTVVTTIHQPQAKIFHLFDQLLLLNRGTIVYQGPAQDALDFFDRSGFPCPAHE--------------------------------NPANHFLDVITPNLNDSVESLT--AKEESLKRHYQPP--------------------PVQHLLDNPRPLVLPRDSTPWHKQFRVLLRRSLKEVWRKRNTTLMLLFLTVIMAVLVGTVFLQIGTDQKSAVRRQPVLFFCVVNQGMFGALIVINSFPAERMLSLRERAAGTYHVSAYFLAKITAEALSQLPAPILFSCIVYFLVGLQPVAAKFFIFMGFMILCSVAATSLALAVSALARTTDMAVTILPLVLEVCRLFGGFYLSPRNLPTYFSWLDALTYVKYTYVGISLNELDGLALTCTPAQ-LDAAG--RCPITSGQQTIDALGLDYLTMGQCAGILVAYISICCGAAYLGVRFLKH 629          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347188 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YR02_9STRA0.000e+0100.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A836CJS3_9STRA0.000e+071.20P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835ZBW7_9STRA2.950e-29967.95P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8J4CN86_9CHLO1.760e-22456.25ABC transporter domain-containing protein n=8 Tax=... [more]
A0A835WTF6_9CHLO1.260e-22256.22ABC transporter domain-containing protein n=3 Tax=... [more]
D8TMA3_VOLCA3.440e-22253.34ABC transporter domain-containing protein n=1 Tax=... [more]
A0A150GN10_GONPE2.330e-21955.90ABC transporter domain-containing protein n=1 Tax=... [more]
A0A2J7ZUP2_9CHLO2.230e-21655.06ATP-binding cassette sub-family G member 2 n=1 Tax... [more]
A0A836C0Y5_9CHLO6.010e-21351.82ABC transporter domain-containing protein n=1 Tax=... [more]
A0A2K3DJM4_CHLRE9.100e-21354.15ABC transporter domain-containing protein n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:251710..262292 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347188|estExt_Genemark1.C_Ctg_90032
KEGG TC3.A.1.204
BRITEko00000,ko00001,ko02000,ko04090,ko04147
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
KEGG koko:K05681,ko:K21396
DescriptionABC-2 type transporter
COG categoryQ
Max annot lvl3041|Chlorophyta
EggNOG OGsCOG1131@1|root,KOG0061@2759|Eukaryota,37YH9@33090|Viridiplantae,34J9N@3041|Chlorophyta
Evalue7.93e-227
Seed ortholog3067.XP_002947559.1
Hectar predicted targeting categoryother localisation
TranscriptId347510
TrackFilteredModels1
ProteinId347188
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347188gene_3524Tribonema minus UTEX_B_3156 geneContig_9 251710..262292 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3524_16exon_3524_16Tribonema minus UTEX_B_3156 exonContig_9 251710..252512 -
exon_3524_15exon_3524_15Tribonema minus UTEX_B_3156 exonContig_9 253272..253426 -
exon_3524_14exon_3524_14Tribonema minus UTEX_B_3156 exonContig_9 254065..254263 -
exon_3524_13exon_3524_13Tribonema minus UTEX_B_3156 exonContig_9 254660..254777 -
exon_3524_12exon_3524_12Tribonema minus UTEX_B_3156 exonContig_9 255460..255547 -
exon_3524_11exon_3524_11Tribonema minus UTEX_B_3156 exonContig_9 255954..256061 -
exon_3524_10exon_3524_10Tribonema minus UTEX_B_3156 exonContig_9 256773..256964 -
exon_3524_9exon_3524_9Tribonema minus UTEX_B_3156 exonContig_9 257035..257088 -
exon_3524_8exon_3524_8Tribonema minus UTEX_B_3156 exonContig_9 257488..257564 -
exon_3524_7exon_3524_7Tribonema minus UTEX_B_3156 exonContig_9 258113..258149 -
exon_3524_6exon_3524_6Tribonema minus UTEX_B_3156 exonContig_9 258308..258366 -
exon_3524_5exon_3524_5Tribonema minus UTEX_B_3156 exonContig_9 258459..258680 -
exon_3524_4exon_3524_4Tribonema minus UTEX_B_3156 exonContig_9 259887..260040 -
exon_3524_3exon_3524_3Tribonema minus UTEX_B_3156 exonContig_9 260915..261045 -
exon_3524_2exon_3524_2Tribonema minus UTEX_B_3156 exonContig_9 261435..261536 -
exon_3524_1exon_3524_1Tribonema minus UTEX_B_3156 exonContig_9 261927..262292 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3524UTR3_3524Tribonema minus UTEX_B_3156 three_prime_UTRContig_9 251710..252421 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3524CDS_3524Tribonema minus UTEX_B_3156 CDSContig_9 261927..262209 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_3524UTR5_3524Tribonema minus UTEX_B_3156 five_prime_UTRContig_9 262210..262292 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347188Trimin1|347188|estExt_Genemark1.C_Ctg_90032Tribonema minus UTEX_B_3156 polypeptideContig_9 252422..262209 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3524 ID=mRNA_3524|Name=jgi.p|Trimin1|347188|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2865bp|location=Sequence derived from alignment at Contig_9:251710..262292- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CACAGAGCACAGTCAAGGGAGCTTGAAATCTCGTTGGTAAGGTAGTCTTC
GCATCTTCGCAGCGTCGCTGCTCGCCAATCACCATGGCAGCTACAGCAGA
CCTCGAGCAGGCCAACCAGCTCACCCTCAGGGCCGGCCAAGATGGCGAAG
ACCTGACCATGCGCCGGCCTCTCACCGCCAACGTGCTGGGTGGGCTGCAA
GAGAGCGTGGACGACGACACGTCCTCCATCCGGTCCCGCACCGACAATCC
CGCCATCCTCACCTTCAAGGACCTGGTGGTGACTGCCAAGGCCCGCAACC
AGGTGCTGTTGAAGGGCATCAGCGGTCAGATGAGGGGAGGTTTCTGGGCG
TGCATGGGTCCCAGCGGCTCCGGCAAGAGTACCCTCTTGAACACTTTGGC
TCTGCGTCTCGACCGCGCCGTCAGCGTCTCTGGCGACCTGCGTCTCAATG
GCCGTTCATACGACAACGCCGAGCTCAAGAGAATGTCAGGCTACGTGATG
CAAGACGACCTGCTCAACGGTAACCTGACCTGTGAGGAGACGCTCGACTA
CACCGCACGCCTGCGCTGCCCTCAAGACAAGACCGACGCCATGCGCAAGG
TGCGCGTGGACAGAGTGCTGCAGCAGATGGGCCTTGAGCATGCGAGGCAC
ACCATCGTAGGCACGCCGCTGCGGAAGGGAATATCTGGCGGCGAGAGGAA
GCGCCTGAGTGTGGGGTTGGAGCTGCTGGTGGAGCCCAAGCTGCTGTTCC
TGGACGAGCCCACGTCCGGGCTGGACTCGGTGACGGCGCTCATGCTGTGC
AACATCCTGCGCGAGATCAGCGAGACGTGCACCGTCGTGTGCACGATCCA
CCAGCCGCAGAGCAAGATCTACAGCCTCTTTGACAACCTCATCCTCCTCA
AGGCGGGCGACATTGCATACCAGGGGCCCGCGCGCGAGGCGCTCGCGTTC
TTCGAGCAGACGGGCTACCCATGCCCGTACCAGGGGCCCGCGCGCGAGGC
GCTCGCGTTCTTCGACCCTCGGGCTACCCATGCCGCGCTCGCGTTCTTCG
AGCAGACGGGCTACCCATGCCCCCCCCTCACCAACCCTGCCGACCACCTG
CTGGACAGCATCTCCATGACGCGCACCGACTCGAGTCACTCGCTGATGGA
CCTGGACGTGGAGAACGACCTGCACCTGCGCTTCACGCGGCCGCTCTCAT
GCGACCTGGACGTGGAGAACGACCTGCACCTGCGCTTCACGCGGCCGCAC
TTTGACCTGCACCACGGCGTCGACAAGCCGCGCCTGCAGCAGCGCGAGAC
CACGTCGTGGTGGCACCAGTTCACCGTACTGCTGGAGCGCTCCCTCAAGG
ACCAGTCGCGGAAGCGCTTCATGATGATCACGCAGATCACTCAGGTCTGC
ATTATGGCGATCCTCATCGGCTTTGCATTCTACGACATTGGGACCGACCA
GAAGTCTGTCACGCTGCGCAAGCCCGTGCTCTTCTTCTGCGTCATCAATC
AGGGTCTGTTCAGTGCCCTGTCCACCATCAACAGCTTCCCCGGCGAGAGA
ATGCTGTCGCTCAGGGAGCGCGCTGCGGGCACCTACTACACTTCGGCGTA
CTTCATGGCCAAGGTGCTGGCGGAGACCGTGATGCAGATCATCCTGCCCA
TCCTCTTCACCTGCATCGTCTACTTCCTCATTGGCCTGCAGAACGAAGCC
AGCAAGTTCTTCATCTTCATGGCCTTCATGGTCCTGTGTTCCCTTGCGGC
AACGTCGCTCGCGCTGCTGGTTTCCGCATTCTGCCGCACCACGGACCTGT
CCGTCACGGTTCTGCCATTCATGCTGGAGATCTGCCGCCTGTTTGGCGCT
TTCTTTCTGTCGCCCGCCAACACGCCGGGGTACTTCGTCTGGCTCGACGC
GCTGTCGTACGTCAAGTACTGCTACGTCGGCGTGTCGCTCAACGAGAATC
ACGGGCTGACGCTGACGTGCACGCCGGAGGAGGAGATAGACGTGGGTGGC
ATCACGCAGTGCCCCATCCCCAACGGCGACGCCTTCCTCGAGTCCCAGGG
CATGGAGAACTGGACCATGGGGGCGTGTGCGGGAATCCTGGTGTTCTACA
TCTTCTTTGCGCGGTTCCTCGCCTACCTCGGCGTGCGCTTCCTCAAGTAC
TAGGGCGCGCGCGTACGCACACGGACATTTGCGGTAGTACGCACACTACA
ACTTGAAGCATTTGGCGCTGCGGCCGTGCTCGCGCGCGCACGCGCCTCAG
CCCATCATCACCACACACATATTGTCGGCGTCCGTTCTCGGACGGGCGAC
TTTTCAATCGCGCGGAGCGACAGTAGCACGACAGCAGAGGGATTCGTTAA
AGCAGGACCAGTATGTCAGGGTCGCCGCGGCGCATCAAGTCGGGCGAGCA
ATTGGCTAGCCCTAGCCCTCAAGCTAGGGTGCGGCCGTTCGGCAAGGCGT
TTTTTATCTAGGCTTGCGGCTGCCTCCGCGGCCACCATTGTGAGATCGGA
GTACAAGAAACGGCAGCATTGTCGAGAGGAGCCAATTGGGAGCGAATGCA
ATACAATAGCGAGGCTGGCAACCGGGGAAATGCGTGTGTAGGGTAGCTGA
AAACGTGTTGTAGTGCGTTGCCACCAGTTGCCCGTGTGATGGGCTCAAGC
GCAGGGGGTGAATGCGGCGAGAATGGGGCCGTTGTGCCTTCCCCCCTTGC
GCCCCACACCACCTTCCATTTGCATGCTTTTTCGAGGGGCTCCATGCCTG
ATTTGTGGGGCAGGCTCAGTGCCTAAATGGCGCCAGACCACCGTTCATCG
CATTCCTTACTGTGTCTTGTTTTCCATCAATGCACGCCACACCAATGACA
TTGGTTGCAACCAAA
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protein sequence of jgi.p|Trimin1|347188

>Trimin1|347188|estExt_Genemark1.C_Ctg_90032 ID=Trimin1|347188|estExt_Genemark1.C_Ctg_90032|Name=jgi.p|Trimin1|347188|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=690bp
MAATADLEQANQLTLRAGQDGEDLTMRRPLTANVLGGLQESVDDDTSSIR
SRTDNPAILTFKDLVVTAKARNQVLLKGISGQMRGGFWACMGPSGSGKST
LLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTC
EETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGI
SGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREISETCT
VVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPYQ
GPAREALAFFDPRATHAALAFFEQTGYPCPPLTNPADHLLDSISMTRTDS
SHSLMDLDVENDLHLRFTRPLSCDLDVENDLHLRFTRPHFDLHHGVDKPR
LQQRETTSWWHQFTVLLERSLKDQSRKRFMMITQITQVCIMAILIGFAFY
DIGTDQKSVTLRKPVLFFCVINQGLFSALSTINSFPGERMLSLRERAAGT
YYTSAYFMAKVLAETVMQIILPILFTCIVYFLIGLQNEASKFFIFMAFMV
LCSLAATSLALLVSAFCRTTDLSVTVLPFMLEICRLFGAFFLSPANTPGY
FVWLDALSYVKYCYVGVSLNENHGLTLTCTPEEEIDVGGITQCPIPNGDA
FLESQGMENWTMGACAGILVFYIFFARFLAYLGVRFLKY*
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mRNA from alignment at Contig_9:251710..262292-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3524 ID=mRNA_3524|Name=jgi.p|Trimin1|347188|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10583bp|location=Sequence derived from alignment at Contig_9:251710..262292- (Tribonema minus UTEX_B_3156 )
CACAGAGCACAGTCAAGGGAGCTTGAAATCTCGTTGGTAAGGTAGTCTTC GCATCTTCGCAGCGTCGCTGCTCGCCAATCACCATGGCAGCTACAGCAGA CCTCGAGCAGGCCAACCAGCTCACCCTCAGGGCCGGCCAAGATGGCGAAG ACCTGACCATGCGCCGGCCTCTCACCGCCAACGTGCTGGGTGGGCTGCAA GAGAGCGTGGACGACGACACGTCCTCCATCCGGTCCCGCACCGACAATCC CGCCATCCTCACCTTCAAGGACCTGGTGGTGACTGCCAAGGCCCGCAACC AGGTGCTGTTGAAGGGCATCAGCGGTCAGATGAGGGGAGGTTTCTGGGCG TGCATGGGTCCCAGCGGTAAGCCACATCTGCGCTTTTTGTTCGAGCATGT TTCATAACTGCCTGTCGGCATTGTGAGCTACATGCACGCAACCGTGCGGT TTGACTTGACCGGTACCCGCTCTCTTTGTACATGTGAGGTGTTGTTTGGC TACTGCTTGGCTACAAAAGCTAGTGCAGTCCAATAAGAGCTGGCTGTAAG TTTTTTGCAATGCAGCCTGCGCTTCTGATGATCTCTCCTTTCCTTTGTAT GCTAGCCAATCGACACTCGAGCGAGACATTTGAATCTGCGGTGTTCTACC TGGCCGGAAATGTTTACAAACAACGAGTTGTTACCTTATCTCATGCGTTC ACCGCCCTCTTTGCTGACAAGATCGACTGTTGTGTGTCTTGTCTCTGTTC ATTCAGGCTCCGGCAAGAGTACCCTCTTGAACACTTTGGCTCTGCGTCTC GACCGCGCCGTCAGCGTCTCTGGCGACCTGCGTCTCAATGGCCGTTCATA CGACAACGGTGAGTGTAGTTGGCACAGACCACAATGCGCTCTCGCGGTGA CCTTGGGGATGCATGCACTTGCGAGTTGTCGTGGCAAAGCCCGTGCTTCA ATTGGCGTTGTTGTGCCAGTGCTAAGCACTGTTCTGCAGAGTTATGTTCA GAACTGCGGTGCCCCCTCAATCATCTGCATACCTCATCAGTGCGGCCATG TACCAGACCTGTGGACCTGCTAGTAGCTAGTTGCTCCGATTCTTGCCACG TGTCGCTCTAACGACTCATTTGCAACAAGTTGGTTCACTCCAACTCCCCT CACTGCACTTTGGTGCCTGGTGGACAGAACAAAGACACAAGGTCGCAGCA CTCACCTGGCACGCATGTGCACATTTTCCCGCTGCTGCGCCCCACAGCCG AGCTCAAGAGAATGTCAGGCTACGTGATGCAAGACGACCTGCTCAACGGT AACCTGACCTGTGAGGAGACGCTCGACTACACCGCACGCCTGCGCTGCCC TCAAGACAAGACCGACGCCATGCGCAAGGTACGCCATCCGCGTTGAACAA ATGGCACAGTGTCCATCTGCGCGTATGCACAATGCTGCTCGGCAGTTGAA TAGGGGAGGTCGCGTCTGCAGCTTGGTCTGGTCAGGATTTCATTGCCGCA CCTCGATTTTTGCGCGCACACATGCGCTGTTGCCAATGGATACAGCCGTA GGGTGGTTTGATGATGGTGCATTACGGGACTTCAGGATATGGTTTTATCA GTGCTTGATGACATAATCAAGCAGGGTTTAGTAGCTGCGGCACCAGCACA GTCGTGCAGGTAGCAGCGTCAGCACAACCGCAGCTGATGTCAGTGCACAT TTGCTCATTCCCTGCTCGAGCACCCACGTGCATGGTTGCCATGTGTTGGT GATGTGCCCTCTATCGGCAAATGGCAATAGTCCTGCCCTGCGCCCATCTT CAGTTGATAGTGTGACATTGACAAATGGCGCACAACTTCTTATGATGGTG TGCCCTGGCCTGCATGGGCAGCTGAGTACAATTACTGTCCACCGGGTACA GGTCACGGAATGTGCAGCGTCATGCGGCACAGAGTGCAAACCTTGTCGCT GTTTGAAGCGTGTTGAGAACTGGCGGTCATTGAAGTTGAACTCTTGACGA TTGATGTTGAGGTTTGCAACAACCGCAGAACTTCATCGCGCTTCACTGCA CCTTGCAGTGTCGTCATGCAGAATCGTGGTCGTCCAGTACTCCGATACAA CAGTGTGTGCACTTCGCCGCCACTTGCAGTTGGGAATGCACATGCTTCAC ACCTTCATGGTGACACCGCCGCGGCCATGCTGCCAAGGGTTTTCTCCTGT ATTCACAAACTGGTGCTGTGTGCGTGTGGTCTACATACTGTGGTTTGTGC AGGTGCGCGTGGACAGAGTGCTGCAGCAGATGGGCCTTGAGCATGCGAGG CACACCATCGTAGGCACGCCGCTGCGGAAGGGAATATCTGGCGGCGAGAG GAAGCGCCTGAGTGTGGGGTTGGAGCTGCTGGTGGAGCCCAAGCTGCTGT TCCTGGGTGAGCTTAGGGCTAGGGTTAGGTTTAGGGGTAGACTGGGGTTT GTCCTGAGTAGTGCTTGAGAAAACGTGCACTAGCCAGGACTGCATGGTCA CTTGCCAGCAGTGGTTAAGTCGTTCGATCTCTTGTTGCATTCACGTCTGC TAATTGGATGGTCAGCAACGCCTGCACCGGCAAGCTTGCCTCTGCAGAAC TCAGTGCGTGCGCACAATGCGCAGCTTAAAGTTTTGATGACAGCGGCGCG TGGCAGTCATCCAGAAGACCTATTTTAAACATCGAGACGTTGTAAACATC ACGATCTGGTTAATATCAAAGACATTGTCAGCAAGCGTAGTTCACGTGCC AGAAGAGCGATGTTGTGAGATTGCTGAATCATGACGCGATTGGGTAACTC TCTGCCACATGCGTAGACTCTTCAACTACAAGGCTGTAGGCTTTGGTGTA TCAGGGGTGACATGATTTTGGTCCATGGTGTTGGTGGCTTCTCAGGGTGC TATGCAATGGTGTTATGGTGCCATATCCTTTGACAGATCTTGACATCGCC ATATCTGCAAAGCAGTGCGTCTGTGCGCCGCATTGCAACACTGGCTCAAC CGGTGCTAGCACCAACTTCGTCACGATGTAGTGGAACCAGCATCCTGAAT TCCTGCTCTGCACATTCTTGCAAGCGTTTTGCATACGCTGCTAGGGCGAG CGCATCAGCTTTACTTCTACAATATACCAAAGTCTTCTGGTGCAGGCTTT GCAACTTAATCACTGCCGCACCGTGCCTCCTGCGTCAGAACTTATACGAG TGTGTGCGCGTATTTTGCCATTACGCAGTCATGATTTTACAATGTGACAG CGCTCATGCTGTGCATCTCTCCGCACTCGCCGTCCACGTTTTGATTCAAC ACCTATTGCGTCAGCGGCGAGTAGCAGTCTGCACTTGCGCCTGGGCTGAC TTTCTATGTGCATTTCTGTTGCCTATTGGTATGTATCGCAGACGAGCCCA CGTCCGGCCTCGACTCGGTGACAGCGCTCATGCTATGCAACCGCGTCATA ATTGCACAATGTGACAGTCCTCATGCCGTGCGTCTCTCCATACCTGTCGA CCGCGCATCGATCGGAACACCGCTTGCTTCACCAGTGATCATGTGGACTA CACTTGCGCCCGGCTGATGACTTCTGTGCATACTACTGTGTCTGTTACCG TATGTATCGCAGACGAGCCCACGTCCGGGCTGGACTCGGTGACGGCGCTC ATGCTGTGCAACATCCTGCGCGAGATCAGCGAGACGTGCACCGTCGTGTG CACGATCCACCAGCCGCAGAGCAAGATCTACAGCCTCTTTGACAACCTCA TCCTCCTCAAGGCGGGCGACATTGCATACCAGGGGCCCGCGCGCGAGGCG CTCGCGTTCTTCGAGCAGACGGGCTACCCATGCCGTGAGTGCCATATACA TATACTTTGAAGTATATACTCCCTCAGCAGGACCGACTTGAAGTCATGTA TGGTTGTGTATTTGTCCAAGGTGCAGCGTACCAGGGGCCCGCGCGCGAGG CGCTCGCGTTCTTCGACCCTCGGGCTACCCATGCCGTGAGTGCACTACAT AAACTCATAAATAAATAGATGCGGTATTGCCGAATGTATGACACGGCCCC TCGAGGTGCTCGTATAGAGTATATATTTTTAGGTACATGTATGGTCATGT ATGTATGTATCGATGGTGCAGCGTACCAGGGCCTGCACGCGAGGCGCTCG CGTTCTTCGAGCAGACGGGCTACCCATGCCGTGAGTGCCATACATACAGA CACTTCTATGTATGTAGCAGTATTGCTGAATGTATGCACAGGGTCTGTGT GGTCATGGGCCGCGCGCGCGGGGCGCTGGCGTGTAGAAGAATATATACCT CAAAGTATATGCTCGTGTATGTATGTATCGATTGTGCAGTGTGGCCGAGG GCTGGCGCACAAGGCGTGCGCGTCCGTTCATACCTATGTTGTGAGTGCCA TGCACTTGGAAGTGCAGGTATACACGATGCATTATAGTGAAAGCATACGG TTCATGTGTGCTCTCTTGTACTTGTGCTGCAGCTGTAGCAGTGTGCCTCA ATCACTGCTGTTGATGTTATCAATGCTGCTGGTGTTTGGTGCTGTCAGTG GGTGTCATGTTTGTCGGTGTAACAGAAAGCATCTTATGCGTATGCGCTGT CCTACCTCATGTACATGCGGCAAGCAGCTGATGTGCTTGTGCATTCTGCC AGGCTCCAGATGTAGTGTACAAGGATCACCGCGTCGCTGACCAGTTGCTG TGTGCTGTGACCCTCATGTCTTCTGCAGCCCCCCTCACCAACCCTGCCGA CCACCTGCTGGACAGCATCTCCATGACGCGCACCGACTCGAGTCACTCGC TGATGGTGAGTCATGAGTCATTGTTCATGCCAATTTGTACCAACGCTATG TGTGCGCTGCACATCAGGTCCTGCTTGTACGCCATATTGACTCTGACTTG CATTGACGCGTCGTTTGCGGCACCACCTGTTTCAGTCCGCTGCTGCGGCA GGATTTGTGCATGCAGATGCGGATCTCCCTCACTTGACTCTGAACCACGA CATAGATGTGGAGAAAATGGCTTGCACCTGCGCTTCACACGGCCGGACAC TCGTGACTTCGACTCATAGACTCCATCGCCGTCTAGAGAACGACCTGCAC CTGCGCTCCATGCGTGACTCTGACTCGCGTACTCAACTGCACCACACCCA CATGACTCTGACTCTGATTCGTGACTTTGAATCGCACAAATATTCACCTG ACAGGACCTGGACGTGGAGAACGACCTGCACCTGCGCTTCACGCGGCCGC TCTCATGCGTCGTCTCACAGAACCAACTGCCGTGACTCTGACTCGCACGC ATACTCACTCGCCTGCCCCGCGCCACAGGACCTGGACGTGGAGAACGACC TGCACCTGCGCTTCACGCGGCCGCACTTTGACCTGCACCACGGCGTCGAC AAGCCGCGCCTGCAGCAGCGCGAGACCACGTCGTGGTGGCACCAGTTCAC CGTACTGCTGGAGCGCTCCCTCAAGGACCAGTCGCGGAAGCGCTTCATGA TGATCACGCAGATCACTCAGGTGGGTGGCGTTCATGATGACCGCGCAAGT CGCGCGGGTTGGTGGCACTCATGATGATCACGCAAGTCACCCAGGTAGGT TGTGATGCGGCGCGGCGCGCGTGCATGCATCGCTCTGTCAAATGGCGGTG TTGCACGTGTATGAAGTGCTCAGGGATCAGACGCAGAAGCGGTTCATGAT GATCACGCAAATCACCCAGGTCGGTGGTGCGGCGCGGCACGCGCATACAT GCATCGCTCTGTCAAGTGGCGGTATCACATGTGCGTGAGGTGCTCAAAGG CCCGTGCGTGCTTAGAAAGATTGGCAAGCGTACGCGTGCTTGGCGTGCTG CTGCAACTTCAACGTTGACTTCAACACATTTCTGAACGTGATGCTGGGGG AAAGGGCGTGTGGCACCTGCGTGCAGTGTTGTGGGAGGGACATCTGGCCA TGTCATCACCATGTGTACTCCGGCCCCTCGCCAGTTTTGCAAGGCTGGCC CCTGCTATCGTGATTTGCTCTGGTCGCGGCAACAGCTCATTTGTAACTGA GTTTCTGTAGGATGGTGCCCTGATAATAGCGCGCGCTTCGCTGGGCTGTG CCAGTTTGCATGAGCCAATGTACACATGGTGTGATACACCGCAGCATACG TCTTACTGCTGTTCTACCGTAGTCCTGCCACCTTATTGGACCCCTTTCAA AGCGCTTCTCTTTGTCATTGCGTCTTGCCAGGTCTGCATTATGGCGATCC TCATCGGCTTTGCATTCTACGACATTGGGACCGACCAGAAGTCTGTCACG CTGCGCAAGCCCGTGCTCTTCTTCTGCGTCATCAATCAGGTATGAAAGTT ACAATTTGAACTTTGTTTTTTTGCAGGGTGCAGGTGCCTCGGTCGCATGT GCTTGCGATGTTAGTAGCAAGCAACTGGTTTTTGTCTGCCATGGCTAGTG TCAGCTACAGAATTCACGTAGCGGTAAGGGGCTGACCTTTACATTACAGT CCATCAGTGTCAACGCTCCACGGCCACTGCAGCAAGAACCACCTTTCATC CATATACGCATACATGTATGCTCCGTGTGCTCAGAGCCGGGCTGTTGTTC CCCACAGTCAGATGACTGGATTCATGTACATGTGCACATGTGTACGTTGA GGTACATCCAAGTACGTAAGTGTATCGCTGCATGTGCACGTCCAATCATG TAATGATATCGCTGCGTGTGCGCATGTTGTATTCTGCCGCAACAGGGTCT GTTCAGTGCCCTGTCCACCATCAACAGCTTCCCCGGCGAGAGAATGCTGT CGCTCAGGGAGCGCGCTGCGGGCACCTACTACAGTAAGTTCATGATTGAA GTTGATTCTACAAAATGAGGGTTGTCTCCATCGCAGCCTGCTTAGTTTTT TAAAGCAGCACTGTACTGCTCAGTTGTGAGCACCACTGCTGCATGTTGTT GTGCACCAGTTGGCCTGTGACTCCCCGCTATACGCCTTACCCCCCTATAG TGTACGCTGCCTGCATTTCCCGCACGACCGCGTGTCAGCACATTGCCCGC TGGCAAACCGCTTGTAGATAGCGCACGCATGTGCATTGCCCATCTGCTCA ATCATGTAGAGGCACTGTCACATGATGGCAGGCATGTTTGTGTTGTTGGT GCCTGTGGCGGCCTGCTGCCGCCGCCGAGTTGCATTGCGTTTTCCCACTA ATGCTCACCGCTCATACTGTCATTCTGCAGCGTTTCGCCTGTGATTGCTT GCTCGGACTCCACCAGGCAATTTGCTTCTTGACCCATGCTGGTTGCATTT TAAAACATGCCGGTACTCCTGACCTGCGACATATACCCACTTGTACTTGC TCCGCTGTACATTTATCCACATTGTCAGCAGTGCACGCCCCCGTTCCATT ACACCTGCTCAACCACAGTGTGCTCGTCTGTTGTGAGCAACGGCAACGCC TTTTTGAACTTCAGCTATGCATGCGCTCCCCTCACCAAGTGTCGCCCGGT GCTTGCGTGCTGCAGCTTCGGCGTACTTCATGGCCAAGGTGCTGGCGGAG ACCGTGATGCAGATCATCCTGCCCATCCTCTTCACCTGCATCGTCTACTT CCTCATTGGCCTGCAGAACGAAGCCAGCAAGTTGTAAGTGGCTCACGCGG GGTCTGCACCGCAGCACTAGCAGCCTGGGCTGTACTGCCCTCTGGCGCTC TCGCACTGGCAGTGTGGCATCACTTGAACTTGACTCGGTTGAACTTTGCG TACAGGATATGCACATGTCTGTGATGGACGGTTGCGCGTCAGAAGGGTCA CTCTGTGTCAGGCAGGTTCCAGCAGCTCCTGTCTGTCACTACGCTGCACC CTGCGTGCACACCGTGCACGCATATGCACGATTGCACCAGCTGCACTCCC CAAAATGCCGCTCCTCAGTACCGCACACTACATCTGCATCAACACTACAG CAAAAGTGCGCATGGATCGTCAATTCCTCACCAGTCTCCCCCCGCTCTCC CCCCCCCCCCCCCCCCCCTCCCCTTGCAGCTTCATCTTCATGGCCTTCAT GGTCCTGTGTTCCCTTGCGGCAACGTCGCTCGCGCTGCTGGTTTCCGCAT TCTGCCGCACCACGGACCTGTCCGTCACGGTTCTGCCATTCATGCTGGAG ATCTGCCGCCTGTTTGGCGCTTTCTTTCTGTCGCCCGCCAACACGCCGGG GTACTTCGTCTGGCTCGACGCGCTGTCGGTGAGCGCTGCTGCAGAGCGTA CATACCTGCCCCATTCCAGTTGCGCATACGCACTGTGCAGTAGTGGCATG CAAATGTGTAGTTTGTCTGGCTCGATGCCCTGTCAGTGAGCGCTGCTGCA GAAAGTACATACCTGCCCCATCTCGTTGCGAATGCGTATTGCATATCGTT ACGAGGGCTTTCAAGTACAATGTGTGCGTTGTCTGGCTCAACGGCCCGCT GGTGGGCGGAACATGTGACGCCTGTGACGCTCCCCCTGTGCTACTTCAAG TACTGCATCGGCTTGTCCAGCAACACGAACCACAACTTCAGAGGCACACC ACGATCACGTGGCTGACTTTGGCGCTATTGTACCCATGCCTTGCGACACC GCCGGACTGACACTCTCTGCGCCTCTCGCACATGGCTTGTGCTCACGTGA CACGGCCAAACTGACCATTTCTTACACCACATGCGCTGCGCAGTGCGCCA ATTGCTACGTCAGCGCGCTGAACGAGAACCACATGCTCACAGGCATACCG CAGCCATATGGCCGATTTTGGCACTTCTAGACCCCATGGCGTGCATGTGC GCGTGCGCCGACGACGCGCTAACTCTTTCTGCCGCCTGTGACGCTCCTCA CTGTGCTGCTGCGCAGTACGTCAAGTACTGCTACGTCGGCGTGTCGCTCA ACGAGAATCACGGGCTGACGCTGACGTGCACGCCGGAGGAGGAGATAGAC GTGGGTGGCATCACGCAGTGCCCCATCCCCAACGGCGACGCCTTCCTCGA GTCCCAGGGCATGGAGAACTGGTGAGCGCCTGTTGATGTTGGCAGCAGTG TTTAGTGATGTACGTATTGAAGTTTATAGAGGAGATAGACGTGAACGGCA TCACGCAGTGCCCCATCCCCAACGGCGACGCCTTCCTCGAGTCCCAGGGC ATGGAGAACTGGTGAGCGCCCGCTGATGTTGGCAGCAGTGCTCAGTGATG TATGTTTTGAAGTGTATAGAGGAGATGGATGTGGCAGTGCCCCATCCCCA ACGGCAACGCCTTCCTGGAGTCACAGGGCATGGAGAACTGGTGAGCGCCT GTTGATGCTGGCAGCAGTGCTCAGCGACGTACGCATTGAAGTATATGCAT AGTTGCATGAAGTGATCAACGAGGCAGGAGTGAAAGTGGAACTGGCATCG CTGCTTCACTGCAGAGTTTGATGCGAAGCTGGGAGGACTCTGGGGGTTTG AGTTGGGCACCTTTTGCGTCAAGCCATCGCTGGCGAACGTTTGTCTGGCA TCACTTTTCTGATGGGTACTTGTATAAATGCTGTTGCAGAAAGGTGGCTT TGATGTGCCTGTGTCTTGGTGGGGAGGAAGTCAGGGAGCGCCGCACTGCT GCTTCACGCACACAAAGCGCTCTGTGCATGACAGCCGCACCAATCTTAGC TTGCATTTGCCTCTTTGCAGCAATATTTCAAAAATGTTTCTACTTTGGAT TTGAAAGTAACCCTCGCTCCTGCGCACTACAAGGAAGGCTCACTTGCACC TCCACACCTGCCATCTGTCCCCCTTTACAGGACCATGGGGGCGTGTGCGG GAATCCTGGTGTTCTACATCTTCTTTGCGCGGTTCCTCGCCTACCTCGGC GTGCGCTTCCTCAAGTACTAGGGCGCGCGCGTACGCACACGGACATTTGC GGTAGTACGCACACTACAACTTGAAGCATTTGGCGCTGCGGCCGTGCTCG CGCGCGCACGCGCCTCAGCCCATCATCACCACACACATATTGTCGGCGTC CGTTCTCGGACGGGCGACTTTTCAATCGCGCGGAGCGACAGTAGCACGAC AGCAGAGGGATTCGTTAAAGCAGGACCAGTATGTCAGGGTCGCCGCGGCG CATCAAGTCGGGCGAGCAATTGGCTAGCCCTAGCCCTCAAGCTAGGGTGC GGCCGTTCGGCAAGGCGTTTTTTATCTAGGCTTGCGGCTGCCTCCGCGGC CACCATTGTGAGATCGGAGTACAAGAAACGGCAGCATTGTCGAGAGGAGC CAATTGGGAGCGAATGCAATACAATAGCGAGGCTGGCAACCGGGGAAATG CGTGTGTAGGGTAGCTGAAAACGTGTTGTAGTGCGTTGCCACCAGTTGCC CGTGTGATGGGCTCAAGCGCAGGGGGTGAATGCGGCGAGAATGGGGCCGT TGTGCCTTCCCCCCTTGCGCCCCACACCACCTTCCATTTGCATGCTTTTT CGAGGGGCTCCATGCCTGATTTGTGGGGCAGGCTCAGTGCCTAAATGGCG CCAGACCACCGTTCATCGCATTCCTTACTGTGTCTTGTTTTCCATCAATG CACGCCACACCAATGACATTGGTTGCAACCAAA
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Coding sequence (CDS) from alignment at Contig_9:251710..262292-

>mRNA_3524 ID=mRNA_3524|Name=jgi.p|Trimin1|347188|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2070bp|location=Sequence derived from alignment at Contig_9:251710..262292- (Tribonema minus UTEX_B_3156 )
ATGGCAGCTACAGCAGACCTCGAGCAGGCCAACCAGCTCACCCTCAGGGC
CGGCCAAGATGGCGAAGACCTGACCATGCGCCGGCCTCTCACCGCCAACG
TGCTGGGTGGGCTGCAAGAGAGCGTGGACGACGACACGTCCTCCATCCGG
TCCCGCACCGACAATCCCGCCATCCTCACCTTCAAGGACCTGGTGGTGAC
TGCCAAGGCCCGCAACCAGGTGCTGTTGAAGGGCATCAGCGGTCAGATGA
GGGGAGGTTTCTGGGCGTGCATGGGTCCCAGCGGCTCCGGCAAGAGTACC
CTCTTGAACACTTTGGCTCTGCGTCTCGACCGCGCCGTCAGCGTCTCTGG
CGACCTGCGTCTCAATGGCCGTTCATACGACAACGCCGAGCTCAAGAGAA
TGTCAGGCTACGTGATGCAAGACGACCTGCTCAACGGTAACCTGACCTGT
GAGGAGACGCTCGACTACACCGCACGCCTGCGCTGCCCTCAAGACAAGAC
CGACGCCATGCGCAAGGTGCGCGTGGACAGAGTGCTGCAGCAGATGGGCC
TTGAGCATGCGAGGCACACCATCGTAGGCACGCCGCTGCGGAAGGGAATA
TCTGGCGGCGAGAGGAAGCGCCTGAGTGTGGGGTTGGAGCTGCTGGTGGA
GCCCAAGCTGCTGTTCCTGGACGAGCCCACGTCCGGGCTGGACTCGGTGA
CGGCGCTCATGCTGTGCAACATCCTGCGCGAGATCAGCGAGACGTGCACC
GTCGTGTGCACGATCCACCAGCCGCAGAGCAAGATCTACAGCCTCTTTGA
CAACCTCATCCTCCTCAAGGCGGGCGACATTGCATACCAGGGGCCCGCGC
GCGAGGCGCTCGCGTTCTTCGAGCAGACGGGCTACCCATGCCCGTACCAG
GGGCCCGCGCGCGAGGCGCTCGCGTTCTTCGACCCTCGGGCTACCCATGC
CGCGCTCGCGTTCTTCGAGCAGACGGGCTACCCATGCCCCCCCCTCACCA
ACCCTGCCGACCACCTGCTGGACAGCATCTCCATGACGCGCACCGACTCG
AGTCACTCGCTGATGGACCTGGACGTGGAGAACGACCTGCACCTGCGCTT
CACGCGGCCGCTCTCATGCGACCTGGACGTGGAGAACGACCTGCACCTGC
GCTTCACGCGGCCGCACTTTGACCTGCACCACGGCGTCGACAAGCCGCGC
CTGCAGCAGCGCGAGACCACGTCGTGGTGGCACCAGTTCACCGTACTGCT
GGAGCGCTCCCTCAAGGACCAGTCGCGGAAGCGCTTCATGATGATCACGC
AGATCACTCAGGTCTGCATTATGGCGATCCTCATCGGCTTTGCATTCTAC
GACATTGGGACCGACCAGAAGTCTGTCACGCTGCGCAAGCCCGTGCTCTT
CTTCTGCGTCATCAATCAGGGTCTGTTCAGTGCCCTGTCCACCATCAACA
GCTTCCCCGGCGAGAGAATGCTGTCGCTCAGGGAGCGCGCTGCGGGCACC
TACTACACTTCGGCGTACTTCATGGCCAAGGTGCTGGCGGAGACCGTGAT
GCAGATCATCCTGCCCATCCTCTTCACCTGCATCGTCTACTTCCTCATTG
GCCTGCAGAACGAAGCCAGCAAGTTCTTCATCTTCATGGCCTTCATGGTC
CTGTGTTCCCTTGCGGCAACGTCGCTCGCGCTGCTGGTTTCCGCATTCTG
CCGCACCACGGACCTGTCCGTCACGGTTCTGCCATTCATGCTGGAGATCT
GCCGCCTGTTTGGCGCTTTCTTTCTGTCGCCCGCCAACACGCCGGGGTAC
TTCGTCTGGCTCGACGCGCTGTCGTACGTCAAGTACTGCTACGTCGGCGT
GTCGCTCAACGAGAATCACGGGCTGACGCTGACGTGCACGCCGGAGGAGG
AGATAGACGTGGGTGGCATCACGCAGTGCCCCATCCCCAACGGCGACGCC
TTCCTCGAGTCCCAGGGCATGGAGAACTGGACCATGGGGGCGTGTGCGGG
AATCCTGGTGTTCTACATCTTCTTTGCGCGGTTCCTCGCCTACCTCGGCG
TGCGCTTCCTCAAGTACTAG
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