mRNA_351 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: A0A835Z6I0_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I0_9STRA) HSP 1 Score: 514 bits (1325), Expect = 7.920e-185 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1 Query: 1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRCVNDYRFVRAKCRPISPCETTELHAESVDFLRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 738 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRCVNDYRFVRAKCRPISPCETTELHAESVDFLRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI Sbjct: 1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRCVNDYRFVRAKCRPISPCETTELHAESVDFLRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 246
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: A0A835Z861_9STRA (Metallo-dependent phosphatase-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z861_9STRA) HSP 1 Score: 281 bits (718), Expect = 2.280e-92 Identity = 136/249 (54.62%), Postives = 177/249 (71.08%), Query Frame = 1 Query: 1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHS--SNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRCVNDYRFVR-AKCRPISPCETTELHAESVDFLRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 738 M++ + SD+HLE G + S++ AD+L+LAGD+A AT ++P F+ + SE +E+VL VPGNHE Y S SM EM L L F NV+LL++ V E GVKFVGSTLWS +P EVS C+NDYR++ R I+P T+ LH ++V FL +HCD +SVVITHHCP+T +TSHPRY GS +CAF+TDVSL +MP+LWVSGHTHFNHDF + GTRF+SNQYRNENW +P+S + T+ I Sbjct: 1 MQLQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLTQMPQLWVSGHTHFNHDFVK--AGTRFISNQYRNENWCMPYSASKTVTI 247
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: A0A835Z038_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z038_9STRA) HSP 1 Score: 260 bits (664), Expect = 3.040e-84 Identity = 129/246 (52.44%), Postives = 167/246 (67.89%), Query Frame = 1 Query: 1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRCVNDYRFVRAKCRPISPCETTELHAESVDFLRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 738 M I +SDVHLE G A PFS +V AD+L++AGD+A A LP FV SE +E+VL+V GNHE+Y SM E+ + + + + NV++++ DV E GV FVG T+WS VPA + E + CVNDYRFVR + P+SP +T H FL + ADSVVITHH PRTR TSHPRY G S +C FATD++LP MP+LW++GHTHFN DF + G TRF+SN +RNEN+R+P S T+EI Sbjct: 1 MLIQFLSDVHLEQG-AVPFSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVD--GDTRFVSNMFRNENYRVPFSRCKTIEI 243
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: A0A835YX12_9STRA (Metallophos domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX12_9STRA) HSP 1 Score: 239 bits (611), Expect = 6.940e-73 Identity = 116/225 (51.56%), Postives = 152/225 (67.56%), Query Frame = 1 Query: 64 LVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRCVNDYRFVRAKCRPISPCETTELHAESVDFLRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 738 +V A++L++AGD+A A LP FV SE +E+VL+V GNHE+Y SM E + + + + NV++++ DV E GVKFVG T+WS VP + E + CVNDYRFVR P+SP +T H FL + ADSVVITHH PRTR TSHPRY G S +C FATD++LP MP+LW++GHTHFN DF + G TRF+SN +RNEN+R+P SP T+EI Sbjct: 288 VVTPAAELLIVAGDVAPAHHFALPYFVRHCSEAFEKVLWVYGNHEWYSRCESMDESASHMADLISEYSNVSVMNPDVVEWRGVKFVGCTMWSHVPVSAREEAALCVNDYRFVRKAHGPVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVD--GDTRFVSNMFRNENYRVPFSPCKTVEI 510
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: A0A2Z3R7Z3_9GAMM (Metallophos domain-containing protein n=1 Tax=Acidiferrobacter sp. SPIII_3 TaxID=1281578 RepID=A0A2Z3R7Z3_9GAMM) HSP 1 Score: 131 bits (329), Expect = 1.460e-33 Identity = 95/269 (35.32%), Postives = 134/269 (49.81%), Query Frame = 1 Query: 1 MRIHVVSDVHLEY----------GGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRV---PADSELEVSRC---VNDYRFVRAKCRPISPCETTELHAESVDF----LRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVS--LPR-MPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 738 M+IH+VSDVHL G +PPF + EADV V AGDI L +A +LYVPGNHE+Y + + +RA LR VTLLDD V +GGV+F+GSTLW+ AD ++ ++D+ +R R +P + +LH S F L + D +VV+THHCP R HP ++ + + AF +D+ + R P W+ GHTH DFQ G TR ++N +P P +E+ Sbjct: 1 MKIHLVSDVHLASWRQRPPPHRGGYSPPFDAWPK-EADVTVFAGDIGPGV-QGLQWAGGQARRWNRPILYVPGNHEFY--GHDLPTLRAALREQAKAEARVTLLDDAVVILGGVRFIGSTLWTDYLNGGADRAAHMAAAAVGLSDHIRIRMAGRAFTPDDALKLHEASRQFIEAELSKSFDGPTVVVTHHCPSPR-CHHPSFENNVLAAAFCSDLEEVIHRYQPAAWICGHTHAAVDFQV--GRTRVVNNPVGYPGETIPGIPANIIEV 262
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: UPI001C832BD2 (metallophosphoesterase n=1 Tax=Rhizobium sp. NZLR8 TaxID=2731104 RepID=UPI001C832BD2) HSP 1 Score: 124 bits (310), Expect = 2.020e-30 Identity = 85/262 (32.44%), Postives = 125/262 (47.71%), Query Frame = 1 Query: 1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWS------RVPADSELEVSRCVNDYR---FVRAKCRPISPCETTELHAESVDFLR----RHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVS---LPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 738 M++ ++SD+HLE+G PF +ADVL+ AGD+ ++A V++VPGNHE+Y ++ + E R F N+ L++D EIGGVKF+G TLW+ R P S +ND++ F +A R P + H ES DF+ + +VVITHH P R P + S +A+D+ P LWV GH H +D++ G TR +SN + R P +EI Sbjct: 1 MKLWIISDIHLEFG--QPFLQTPPIDADVLICAGDLGTKGVVPSLQWLADTYANTLPVIFVPGNHEFYFAA--IEESIRDAREFAAGFSNIHFLENDAVEIGGVKFIGGTLWTDFRLFGRKPEVSMSYAQSGMNDFKKINFSKAPFRKFKPIDAYRKHVESRDFIAAELCKRTPMPTVVITHHAPSPRSID-PGFRHDPLSACYASDLEDLMWEAGPDLWVHGHVHHRNDYKV--GDTRVVSNPRGYPSERTGFDPAFIVEI 255
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: UPI001CCAE4A0 (metallophosphoesterase n=1 Tax=Mesorhizobium sp. ES1-4 TaxID=2876627 RepID=UPI001CCAE4A0) HSP 1 Score: 121 bits (304), Expect = 7.040e-30 Identity = 96/269 (35.69%), Postives = 136/269 (50.56%), Query Frame = 1 Query: 1 MRIHVVSDVHLEYGGAPPFSSLVAA-EADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRC---------VNDYRFVRAKCRP----ISPCETTELHAESVDFLRRHC----DADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVS-LPRM--PRLWVSGHTHFNHDFQEPQGGTRFLSNQ--YRNENWRLPHSPTMTLEI 738 M++ V+SD+H E+ +L +ADV V+AGD+ C ++ R V+YV GNHE+Y S A + AA P NV L++DVA IGGV+F+G TLW+ D R +ND++ + + P +P + +LH S DFLRR DA +VV+THH P + P++ GSS + AFA+D+S L + PRLWV GH H + D+ TR + N Y NEN P + LEI Sbjct: 1 MKLWVLSDLHSEFDSPMQKGNLGRMPDADVCVVAGDVTNG-CGNALRWLDRMIAPAMPVVYVAGNHEFYQDSVMEGLEWARVHAAECP--NVHFLENDVAVIGGVRFLGCTLWTDYALDGRERTERAWAMANAEGRLNDHKIISWRRLPRYEAFTPLKALDLHERSRDFLRRELKTPFDAQTVVVTHHAPHPLSVN-PKWKGSSLNPAFASDLSELMELYRPRLWVHGHMHDSADYFVRD--TRVICNPKGYGNENPAF--DPALVLEI 261
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: UPI000FEC7DD0 (metallophosphoesterase n=1 Tax=Rhizobium hidalgonense TaxID=1538159 RepID=UPI000FEC7DD0) HSP 1 Score: 122 bits (306), Expect = 7.800e-30 Identity = 92/265 (34.72%), Postives = 130/265 (49.06%), Query Frame = 1 Query: 1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIA----AATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWS------RVPADSELEVSRCVNDYR---FVRAKCRPISPCETTELHAESVDF----LRRHCDADSVVITHHCPRTRKTSHP-RYDGSSASCAF-ATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 738 M++ +VSD+HLE+G PFS + DV++ AGD+ + L D V +A V++V GNHEYY S S+ E R + F N+ L++D EIGGV+F+G TLW+ R P S + +NDY+ F +A R P + H E+ +F LR +VV+THH P R R+D SAS A D+ P LWV GH H +D++ G TR +SN + R P +EI Sbjct: 1 MKLWIVSDLHLEFG--QPFSQTPPDDVDVMICAGDVLIRGIVPSLQWLADTVGQAVP----VIFVAGNHEYY--SASVQESIQDAREFVSRFPNIHFLENDAVEIGGVRFIGGTLWTDFRLFGRNPEVSMSYAASGMNDYKKIKFSKAPFRKFKPIDAYRKHVETRNFIAEELRGQAGLTTVVVTHHAPSPRAIDLGFRHDPLSASYASDLEDLLWEAGPDLWVHGHVHHRNDYKV--GDTRVVSNPRGYPSERTGFDPAFIVEI 255
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: A0L955_MAGMM (Metallophosphoesterase n=1 Tax=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) TaxID=156889 RepID=A0L955_MAGMM) HSP 1 Score: 121 bits (303), Expect = 8.000e-30 Identity = 90/246 (36.59%), Postives = 128/246 (52.03%), Query Frame = 1 Query: 1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYER----VLYVPGNHEYYHSSNSMAEMRACLRAALDPFGN-VTLLDDDVAEIGGVKFVGSTLWSRVPADSE-------LEVSRCVNDYRFVRAKCRPISPCETTELHAESVDFLRRH----CDADSVVITHHCPRTRKT-SHPRYDGSSASCAFATDVSLPRMPR--LWVSGHTHFNHDFQEPQGGTRFLSN 681 M++H++SD+H E PF L ADV+VLAGDI VA A + +R VL+VPGNH++YH + + + + G+ V +LDDD IGGV+F+GSTLW+ E + + +NDYR + P++P E H S ++LR+ C +V+ITHH P R SH R+D SA AF +D++ P M LWV GH H + D++ G TR L N Sbjct: 1 MKLHILSDLHTEMA---PFG-LPETNADVVVLAGDIGYGR-----KGVAGAVQACQRQGKPVLFVPGNHDFYHQTEGIGIQGVIEQMKCEALGSDVHVLDDDEVIIGGVRFLGSTLWTDFDFFGEGLRDLVMMAAKKGINDYRCITDGSSPLTPAVLRERHLRSREWLRQSLANGCGLKTVIITHHAPHGRSCPSHFRHDPVSA--AFISDMA-PFMGEAALWVHGHVHASMDYR--LGDTRVLCN 232
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Match: UPI000F85EFE1 (metallophosphoesterase n=1 Tax=Rhizobium phaseoli TaxID=396 RepID=UPI000F85EFE1) HSP 1 Score: 120 bits (302), Expect = 1.150e-29 Identity = 90/263 (34.22%), Postives = 127/263 (48.29%), Query Frame = 1 Query: 1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRV------PADSELEVSRCVNDYRFVRAKCRPIS---PCETTELHAESVDF----LRRHCDADSVVITHHCPRTRKT-SHPRYDGSSASCAFATDVS---LPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 738 M+I +SD+HLE+ PF+ A+ADV+V AGD+ ++A+ V++ PGNHEYY A + A + F V L++ VAEI GV FVG TLW+ P + + +NDY +R P S P +T H E+ +F LR A +VV+THH P R S RYD SSA +A+D+ L P LW+ GH H +D+ G TR +SN +P + +EI Sbjct: 1 MKIWPISDLHLEF--CEPFNIQPPADADVVVCAGDVLTKGIVPSLRWLAKHLAGKVPVVFCPGNHEYYGD----AVQESLKEAVAESFAGVHFLENAVAEIDGVSFVGGTLWTDFRLFGINPQVAMSYAAHDMNDYDKIRLSKSPYSKFRPIDTYRKHVETREFIARELREWSGAKAVVVTHHAPSPRSVASEFRYDPSSA--CYASDLEELILETRPALWIHGHVHHRNDYYV--GSTRIVSNPRGYPREETQFAPGLIVEI 253 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157405 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_351 ID=mRNA_351|Name=jgi.p|Trimin1|157405|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_3:978750..979490- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGGATCCACGTCGTCTCGGACGTTCACCTCGAGTACGGGGGAGCTCCback to top protein sequence of jgi.p|Trimin1|157405 >Trimin1|157405|e_gw1.3.182.1 ID=Trimin1|157405|e_gw1.3.182.1|Name=jgi.p|Trimin1|157405|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARback to top mRNA from alignment at Contig_3:978750..979490- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_351 ID=mRNA_351|Name=jgi.p|Trimin1|157405|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_3:978750..979490- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:978750..979490- >mRNA_351 ID=mRNA_351|Name=jgi.p|Trimin1|157405|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=741bp|location=Sequence derived from alignment at Contig_3:978750..979490- (Tribonema minus UTEX_B_3156 )back to top |